pycom16g19910

U3 small nucleolar RNA-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0001399
Physical Location & Seq
Reverse (-)
17351248 .. 17360124
8877 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2658 bp
ATGGGAATATTCGAGCCGTTCAGAGCAATCGGCTACACAACCAGCTCCGTCCCCTTCTCTGTTCAGCGGCTCGGCACCGAAACCTTCGTCACTGTCTCCGTCGGCAAGGCTTTCCAGATTTACAACTGCGCAAAGCTCAGTCTCGTCCTCGTTGGTCCACAATTGCCGAAGAAGATTCGAGCTCTTGCTTGCTACCGTGATTATACGTTTGCTGCATATGGGAATGAGATAGCCGTTTTTAAGCGAGCTCATCAGGTAGCAACATGGTGCAGCCATAGTGCCAAGGTCAATTCGTTGCTATTGTTTGGAGAGCATATCCTAAGTGTTGATGTTGAAGGTCATCTGTTTATATGGGCATTCAAAGGAATTGATGAGAACCATACTCCGATTGGACATGTTATGTTAGACAACAACTTTTTTCCTAGCTGTATAATGCATCCAGATACCTACCTAAATAAGATTATTATTGGGAGTCAGGAAGGTTCACTTCAACTTTGGAACATCAGTGCAAAGAAAAAACTCTATGAGTTCAAGGGATGGAATTCTTCTATCTGCAGTTGTGTTTCATCTCCTGCACTAGATGTTATTGCAGTTGGTTGTGCTGATGGAAACGTTCATGTTCACAACATTCGTTACGATGAAGAGCTAGTCACGTTTTCTCATTCAACACGAGGTGCTGTGACTGCCTTATCTTTCAGCACAGATGGGCAGCCTCTACTAGCATCTGGAGGTTCTTCAGGTGTCATAAGCATATGGAATCTCGAAAAAAGAAGGCTTCAATCAGTAATAAGAGATGCACATGATGGTTCTGTACTTTCACTTCACTTTCTTGTGAATGAACCCGTGCTAATGAGTTCATCATCTGACAATTCCATCAAAATGTGGATTTTTGACACAACTGATGGAGATCCTCGACTTTTACGCTTCAGAAGTGGTCATAGTGCTCCTCCACAATGCATAAGGTTTTATGCGAATGGGAGACACATTCTATCAGCTGGTCAGGACCGTGCATTTCGCCTTTTCTCTGTCATACAGGATCAGCAAAGTAGAGAGCTTTCTCAGCGTCACATATCCAAACGAGCAAAGAAACTGAAGATGAAGGAAGAAGAGATAAAACTGAAGCCTGTTATCGCTTTTGATTGTGCTGAAATAAGAGAGCGAGATTGGTGCAATGTGGTTACATGCCATATGGATACTGCACAGGCATATGTATGGAGACTTCAAAACTTTGTTCTTGGTGAGCATATTCTGAAGCCAAGACCGGAAAACCCCACACCAGTGAAGGCTTGTGCCATCAGTGCATGTGGCAATTTTGCCATACTGGGGACAGCGGATGGTTGGGTTGAGCGGTTCAACCTCCAATCAGGAATCAGTCGAGGCAGTTACATGGACACGTCAGAAAGAAGGAGCTTTGCCCATGATGGGGAAGTGGTTGGAATTGCTTGTGATTCAACGAATACTGTAATGATAAGTGCAGGATATCACGGAGACATAAAGGTTTGGAATTTCAAGGGACGTGATGTAAAATCTAGATGGGAAGTTGGGTGCTCCGTTGTGAAGATTGTATACAATCGTTTGAATGGTCTTCTGGCTGTTGTGGCTGATGACTTAATCATCCGTTTGTATGATGTTGTGGCATCAAGAATGGTTCGTAAATTTGAAGGTCATATGGATCGTATTACAGACATGTGTTTTAGTGAGGATGGAAAATGGCTTTTGTCATCAAGTATGGATGGAAGTCTTCGAGTCTGGGATGTTATTTTAGCAAGACAAATAGATGCGTTGGATGTTGACGTGGCTATAACAGCATTGTCTCTGTCACCGAATATGGATGTTCTAGCGACTGCGCATGTTGACCAAAATGGGGTCTATCTTTGGGTAAACCAATCGATGTTTTCTGGAGCTTCAAAAGTCGATTCTTATGCAAGTGGAAAGGAAGTTAGGAGTGTTAAGTTGCCATCTATCTCTTCAACAAAAGGTTCTCTAGAGGAGGACTCTGACGAGCCTATTGTGGACCATCCACAATCCAAAGATGCTCCTGCATTTACTACTCTTGACTTTCAAATTCCAGATCTTGTTACTCTCTCATTATTGCCTAAAAGCCAGTGGCAAAGCTTAATCAATTTAGACACTATAAAGGAACGGAATAAACCAATTGAACCGCCAAAAAAACCCGAAAGGGCTCCTTTCTTTTTGCCTTCAATTCCCTCTTTTTCAGGAGAAATATTATTTACGGGATTAGAAAACAAGGAGGCCGAAGGTGATGACGTAGAACACACTAGAATAAAGTCTGTTTCAGCATTTACTGATTATATTAAGAGTTTGTCTCCATCGACTCTGGACATGGAGCTTCGAATGCTTGAGATTGTTGATGATGAGGATGAGGAAGAACTTGAAAGCCGCCCAGAATTACTTTCAATCGAACTGCTCCTTGATTATTTTATACATGAGACTTCGTGCAGAAACAATTTTGACTTTGTACAAGCTGTAATCAAGGTGTTTCTGAAGATCCATGGCGAAACAATTCGGTGCCAATCAAGACTGCAGGACAAGGCAAGGGAGCTCCTAGATATTCAATGCAAAACATGGCAAAGAGTAGAAAAGTTGTTTCAAAGTACTAGCTGCGTTGTCGCATTTCTTAGCAATTCACGGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
ANAPC4_WD40 Utp21 WD40

Protein Analysis

886

Amino Acids

99.23

Weight (kDa)

6.06

Isoelectric Point (pI)

43.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR36-Utp21_1st PF25171 30 - 298 1.9e-99 WDR36/Utp21 first beta-propeller
Beta-prop_RIG_2nd PF23775 133 - 287 6.4e-07 RIG second beta-propeller
WD40_Prp19 PF24814 144 - 295 1.2e-16 Prp19 WD40 domain
WD40_Gbeta PF25391 145 - 242 1.3e-07 G protein beta WD-40 repeat protein
Beta-prop_EML_2 PF23414 146 - 299 5.8e-14 Echinoderm microtubule-associated protein second beta-propeller
WD40_CDC20-Fz PF24807 151 - 258 3.7e-14 CDC20/Fizzy WD40 domain
Beta-prop_WDR5 PF25175 152 - 297 2.7e-17 WDR5 beta-propeller domain
Beta-prop_WDR90_POC16_2nd PF23393 152 - 260 3.2e-12 WDR90/POC16, second beta-propeller
Beta-prop_WDR3_2nd PF25172 152 - 258 1e-05 WDR3 second beta-propeller domain
Beta-prop_HPS5 PF23756 153 - 266 9.3e-08 HPS5 beta-propeller
Beta-prop_THOC3 PF25174 153 - 257 9.3e-11 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 154 - 360 1.2e-21 WDR5 beta-propeller domain
WDR90_beta-prop_4th PF23342 155 - 273 7.2e-08 WDR90, 4th beta-propeller
Beta-prop_WDR3_1st PF25173 156 - 343 1.6e-24 WDR3 first beta-propeller domain
Beta-prop_EML PF23409 157 - 296 1e-14 Echinoderm microtubule-associated protein first beta-propeller
WD40_MABP1-WDR62_2nd PF24782 162 - 370 2.6e-11 MABP1/WDR62 second WD40 domain
Beta-prop_Aladin PF25460 176 - 343 1.1e-06 Aladin seven-bladed propeller
WDR55 PF24796 183 - 295 3e-10 WDR55
Beta-prop_VPS8 PF23410 194 - 290 5.1e-08 Vps8 beta-propeller
Beta-prop_THOC3 PF25174 225 - 299 6.6e-09 THOC3 beta-propeller domain
WD40_WDHD1_1st PF24817 226 - 300 3.9e-06 WDHD1 first WD40 domain
Beta-prop_WDR3_2nd PF25172 227 - 343 2.6e-09 WDR3 second beta-propeller domain
Beta-prop_TEP1_2nd PF25047 239 - 346 2.2e-07 TEP-1 second beta-propeller
WD40_Gbeta PF25391 247 - 353 2.4e-06 G protein beta WD-40 repeat protein
Beta-prop_WDR36-Utp21_2nd PF25168 319 - 636 1.3e-104 WDR36/Utp21 second beta-propeller domain
WD40_Prp19 PF24814 422 - 619 2.3e-14 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 426 - 626 3.2e-19 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 430 - 616 8.5e-16 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 473 - 621 3.2e-19 WDR3 first beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 477 - 585 1.7e-06 MABP1/WDR62 second WD40 domain
Beta-prop_EML_2 PF23414 479 - 591 5.3e-08 Echinoderm microtubule-associated protein second beta-propeller
WDR55 PF24796 489 - 586 2.2e-06 WDR55
WD40_WDHD1_1st PF24817 518 - 596 2.1e-10 WDHD1 first WD40 domain
WD40 PF00400 549 - 585 8.4e-11 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 550 - 621 2.8e-07 CAF1B/HIR1 beta-propeller domain
Utp21 PF04192 690 - 764 1.4e-23 Utp21 specific WD40 associated putative domain
Utp21 PF04192 763 - 881 7.7e-21 Utp21 specific WD40 associated putative domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 130, 1848
AccB1I GGYRCC 2 cut(s) 74, 2529
AccBSI CCGCTC 1 cut(s) 1348
AccI GTMKAC 1 cut(s) 1566
AciI CCGC 5 cut(s) 67, 1331, 1348, 2162, 2401
AclI AACGTT 1 cut(s) 612
AclWI GGATC 4 cut(s) 902, 1044, 1680, 2503
AcsI RAATTY 4 cut(s) 541, 1504, 1655, 2064
AcuI CTGAAG 6 cut(s) 720, 910, 1112, 1139, 1271, 2525
AdeI CACNNNGTG 1 cut(s) 674
AfaI GTAC 3 cut(s) 813, 2481, 2617
AfiI CCNNNNNNNGG 4 cut(s) 1323, 1422, 1423, 1864
AflIII ACRYGT 3 cut(s) 394, 1392, 1686
AjiI CACGTC 3 cut(s) 1395, 1517, 1795
AleI CACNNNNGTG 1 cut(s) 1277
Alw21I GWGCWC 5 cut(s) 184, 250, 946, 1550, 2565
Alw26I GTCTC 8 cut(s) 100, 146, 973, 1210, 1482, 1818, 2331, 2444
AlwI GGATC 4 cut(s) 902, 1044, 1680, 2503
AoxI GGCC 1 cut(s) 2253
ApeKI GCWGC 4 cut(s) 212, 270, 709, 2622
ApoI RAATTY 4 cut(s) 541, 1504, 1655, 2064
ArsI GACNNNNNNTTYG 2 cut(s) 72, 104
Asp700I GAANNNNTTC 1 cut(s) 2523
AspLEI GCGC 2 cut(s) 131, 1849
AspS9I GGNCC 3 cut(s) 155, 1003, 2014
AsuHPI GGTGA 3 cut(s) 1250, 1812, 2273
AsuII TTCGAA 1 cut(s) 2353
AvaII GGWCC 3 cut(s) 155, 1003, 2014
BanI GGYRCC 2 cut(s) 74, 2529
BanII GRGCYC 4 cut(s) 184, 250, 2185, 2565
BarI GAAGNNNNNNTAC 6 cut(s) 804, 836, 1203, 1235, 1550, 1582
BauI CACGAG 1 cut(s) 669
BbsI GAAGAC 2 cut(s) 1577, 1733
Bbv12I GWGCWC 5 cut(s) 184, 250, 946, 1550, 2565
BbvI GCAGC 4 cut(s) 199, 282, 721, 2609
BceAI ACGGC 1 cut(s) 218
BcgI CGANNNNNNTGC 4 cut(s) 1149, 1183, 1904, 1938
BciVI GTATCC 1 cut(s) 1186
BcoDI GTCTC 8 cut(s) 100, 146, 973, 1210, 1482, 1818, 2331, 2444
BfmI CTRYAG 2 cut(s) 553, 2543
BfuI GTATCC 1 cut(s) 1186
BglII AGATCT 1 cut(s) 2071
BisI GCNGC 6 cut(s) 68, 213, 271, 710, 2401, 2623
BlsI GCNGC 6 cut(s) 69, 214, 272, 711, 2402, 2624
BmcAI AGTACT 1 cut(s) 2617
Bme18I GGWCC 3 cut(s) 155, 1003, 2014
BmgBI CACGTC 3 cut(s) 1395, 1517, 1795
BmgT120I GGNCC 3 cut(s) 155, 1003, 2014
BmiI GGNNCC 3 cut(s) 76, 2184, 2531
BmrI ACTGGG 1 cut(s) 1331
BmsI GCATC 6 cut(s) 445, 731, 784, 1646, 1768, 2023
BmuI ACTGGG 1 cut(s) 1331
BpiI GAAGAC 2 cut(s) 1577, 1733
BplI GAGNNNNNCTC 4 cut(s) 1979, 2011, 2311, 2343
BpmI CTGGAG 2 cut(s) 747, 1920
Bpu14I TTCGAA 1 cut(s) 2353
BpuEI CTTGAG 1 cut(s) 2381
Bsa29I ATCGAT 1 cut(s) 1889
BsaBI GATNNNNATC 1 cut(s) 906
BsaJI CCNNGG 2 cut(s) 282, 2512
BsaWI WCCGGW 1 cut(s) 1261
Bsc4I CCNNNNNNNGG 4 cut(s) 1323, 1422, 1423, 1864
Bse1I ACTGG 3 cut(s) 1277, 1326, 2104
Bse3DI GCAATG 1 cut(s) 1177
Bse8I GATNNNNATC 1 cut(s) 906
BseCI ATCGAT 1 cut(s) 1889
BseDI CCNNGG 2 cut(s) 282, 2512
BseJI GATNNNNATC 1 cut(s) 906
BseLI CCNNNNNNNGG 4 cut(s) 1323, 1422, 1423, 1864
BseMI GCAATG 1 cut(s) 1177
BseMII CTCAG 2 cut(s) 151, 1073
BseNI ACTGG 3 cut(s) 1277, 1326, 2104
BseRI GAGGAG 2 cut(s) 936, 2003
BseXI GCAGC 4 cut(s) 199, 282, 721, 2609
BsgI GTGCAG 5 cut(s) 289, 558, 1182, 1494, 2479
BshFI GGCC 1 cut(s) 2255
BshNI GGYRCC 2 cut(s) 74, 2529
BshVI ATCGAT 1 cut(s) 1889
BsiHKAI GWGCWC 5 cut(s) 184, 250, 946, 1550, 2565
BsiSI CCGG 1 cut(s) 1262
BslFI GGGAC 3 cut(s) 35, 1339, 1527
BslI CCNNNNNNNGG 4 cut(s) 1323, 1422, 1423, 1864
BsmAI GTCTC 8 cut(s) 100, 146, 973, 1210, 1482, 1818, 2331, 2444
BsmFI GGGAC 3 cut(s) 35, 1339, 1527
BsmI GAATGC 2 cut(s) 356, 2361
BsnI GGCC 1 cut(s) 2255
Bsp119I TTCGAA 1 cut(s) 2353
Bsp1286I GDGCHC 6 cut(s) 184, 250, 946, 1550, 2185, 2565
Bsp1407I TGTACA 1 cut(s) 2479
Bsp143I GATC 5 cut(s) 907, 1036, 1672, 2071, 2508
Bsp19I CCATGG 1 cut(s) 2512
BspACI CCGC 5 cut(s) 67, 1331, 1348, 2162, 2401
BspANI GGCC 1 cut(s) 2255
BspCNI CTCAG 2 cut(s) 150, 1072
BspDI ATCGAT 1 cut(s) 1889
BspLI GGNNCC 3 cut(s) 76, 2184, 2531
BspMAI CTGCAG 2 cut(s) 557, 2547
BspPI GGATC 4 cut(s) 902, 1044, 1680, 2503
BspQI GCTCTTC 1 cut(s) 636
BspT104I TTCGAA 1 cut(s) 2353
BspT107I GGYRCC 2 cut(s) 74, 2529
BsrBI CCGCTC 1 cut(s) 1348
BsrDI GCAATG 1 cut(s) 1177
BsrGI TGTACA 1 cut(s) 2479
BsrI ACTGG 3 cut(s) 1277, 1326, 2104
BssECI CCNNGG 2 cut(s) 282, 2512
BssMI GATC 5 cut(s) 907, 1036, 1672, 2071, 2508
BssNAI GTATAC 1 cut(s) 1567
BssSI CACGAG 1 cut(s) 669
BssT1I CCWWGG 2 cut(s) 282, 2512
Bst1107I GTATAC 1 cut(s) 1567
Bst2BI CACGAG 1 cut(s) 669
Bst4CI ACNGT 5 cut(s) 94, 197, 1007, 1462, 2652
Bst6I CTCTTC 3 cut(s) 636, 1101, 1972
BstAUI TGTACA 1 cut(s) 2479
BstBI TTCGAA 1 cut(s) 2353
BstC8I GCNNGC 2 cut(s) 190, 246
BstDEI CTNAG 4 cut(s) 137, 320, 1059, 2639
BstDSI CCRYGG 1 cut(s) 2512
BstHHI GCGC 2 cut(s) 131, 1849
BstKTI GATC 5 cut(s) 910, 1039, 1675, 2074, 2511
BstMAI GTCTC 8 cut(s) 100, 146, 973, 1210, 1482, 1818, 2331, 2444
BstMBI GATC 5 cut(s) 907, 1036, 1672, 2071, 2508
BstMWI GCNNNNNNNGC 6 cut(s) 683, 1060, 1298, 1598, 1805, 2356
BstNSI RCATGY 5 cut(s) 398, 1185, 1305, 1690, 1853
BstSFI CTRYAG 2 cut(s) 553, 2543
BstV1I GCAGC 4 cut(s) 199, 282, 721, 2609
BstV2I GAAGAC 2 cut(s) 1577, 1733
BstX2I RGATCY 3 cut(s) 907, 2071, 2508
BstYI RGATCY 3 cut(s) 907, 2071, 2508
BstZ17I GTATAC 1 cut(s) 1567
Bsu15I ATCGAT 1 cut(s) 1889
BsuI GTATCC 1 cut(s) 1186
BsuRI GGCC 1 cut(s) 2255
BsuTUI ATCGAT 1 cut(s) 1889
BtgI CCRYGG 1 cut(s) 2512
BtrI CACGTC 3 cut(s) 1395, 1517, 1795
BtsIMutI CAGTG 5 cut(s) 90, 511, 1284, 1303, 2111
Cac8I GCNNGC 2 cut(s) 190, 246
CfoI GCGC 2 cut(s) 131, 1849
Cfr13I GGNCC 3 cut(s) 155, 1003, 2014
ClaI ATCGAT 1 cut(s) 1889
CseI GACGC 1 cut(s) 1052
Csp6I GTAC 3 cut(s) 812, 2480, 2616
CviQI GTAC 3 cut(s) 812, 2480, 2616
DdeI CTNAG 4 cut(s) 137, 320, 1059, 2639
DpnI GATC 5 cut(s) 909, 1038, 1674, 2073, 2510
DpnII GATC 5 cut(s) 907, 1036, 1672, 2071, 2508
DraIII CACNNNGTG 1 cut(s) 674
Eam1104I CTCTTC 3 cut(s) 636, 1101, 1972
EarI CTCTTC 3 cut(s) 636, 1101, 1972
Ecl136II GAGCTC 3 cut(s) 182, 248, 2563
Eco130I CCWWGG 2 cut(s) 282, 2512
Eco24I GRGCYC 4 cut(s) 184, 250, 2185, 2565
Eco32I GATATC 1 cut(s) 1481
Eco47I GGWCC 3 cut(s) 155, 1003, 2014
Eco53kI GAGCTC 3 cut(s) 182, 248, 2563
Eco57I CTGAAG 6 cut(s) 720, 910, 1112, 1139, 1271, 2525
EcoICRI GAGCTC 3 cut(s) 182, 248, 2563
EcoRI GAATTC 1 cut(s) 541
EcoRV GATATC 1 cut(s) 1481
EcoT14I CCWWGG 2 cut(s) 282, 2512
EcoT22I ATGCAT 2 cut(s) 438, 959
EcoT38I GRGCYC 4 cut(s) 184, 250, 2185, 2565
ErhI CCWWGG 2 cut(s) 282, 2512
FalI AAGNNNNNCTT 4 cut(s) 471, 503, 2170, 2202
FaqI GGGAC 3 cut(s) 35, 1339, 1527
FauNDI CATATG 5 cut(s) 217, 752, 1188, 1207, 1668
FblI GTMKAC 1 cut(s) 1566
Fnu4HI GCNGC 6 cut(s) 68, 213, 271, 710, 2401, 2623
FriOI GRGCYC 4 cut(s) 184, 250, 2185, 2565
Fsp4HI GCNGC 6 cut(s) 68, 213, 271, 710, 2401, 2623
FspI TGCGCA 2 cut(s) 130, 1848
GlaI GCGC 2 cut(s) 130, 1848
GluI GCNGC 6 cut(s) 68, 213, 271, 710, 2401, 2623
GsuI CTGGAG 2 cut(s) 747, 1920
HaeIII GGCC 1 cut(s) 2255
HapII CCGG 1 cut(s) 1262
HgaI GACGC 1 cut(s) 1052
HhaI GCGC 2 cut(s) 131, 1849
Hin6I GCGC 2 cut(s) 129, 1847
HinP1I GCGC 2 cut(s) 129, 1847
HincII GTYRAC 2 cut(s) 1792, 1855
HindII GTYRAC 2 cut(s) 1792, 1855
HindIII AAGCTT 1 cut(s) 2113
HinfI GANTC 9 cut(s) 175, 472, 757, 1368, 1448, 1746, 1916, 1994, 2335
HpaII CCGG 1 cut(s) 1262
HphI GGTGA 3 cut(s) 1250, 1812, 2273
Hpy166II GTNNAC 8 cut(s) 158, 485, 622, 1567, 1792, 1855, 1882, 2014
Hpy188I TCNGA 8 cut(s) 23, 387, 865, 929, 1251, 1399, 1999, 2505
Hpy8I GTNNAC 8 cut(s) 158, 485, 622, 1567, 1792, 1855, 1882, 2014
Hpy99I CGWCG 1 cut(s) 104
HpyCH4III ACNGT 5 cut(s) 94, 197, 1007, 1462, 2652
HpyCH4IV ACGT 7 cut(s) 206, 612, 653, 1394, 1516, 1794, 2268
HpyF10VI GCNNNNNNNGC 6 cut(s) 683, 1060, 1298, 1598, 1805, 2356
HpyF3I CTNAG 4 cut(s) 137, 320, 1059, 2639
HpySE526I ACGT 7 cut(s) 206, 612, 653, 1394, 1516, 1794, 2268
HspAI GCGC 2 cut(s) 129, 1847
Kzo9I GATC 5 cut(s) 907, 1036, 1672, 2071, 2508
LguI GCTCTTC 1 cut(s) 636
Lsp1109I GCAGC 4 cut(s) 199, 282, 721, 2609
LweI GCATC 6 cut(s) 445, 731, 784, 1646, 1768, 2023
MaeII ACGT 7 cut(s) 206, 612, 653, 1394, 1516, 1794, 2268
MaeIII GTNAC 9 cut(s) 88, 632, 649, 679, 1064, 1177, 1382, 1818, 2077
MalI GATC 5 cut(s) 909, 1038, 1674, 2073, 2510
MbiI CCGCTC 1 cut(s) 1348
MboI GATC 5 cut(s) 907, 1036, 1672, 2071, 2508
MfeI CAATTG 2 cut(s) 161, 2154
MflI RGATCY 3 cut(s) 907, 2071, 2508
MhlI GDGCHC 6 cut(s) 184, 250, 946, 1550, 2185, 2565
MlyI GAGTC 4 cut(s) 481, 1755, 1988, 2329
MmeI TCCRAC 2 cut(s) 1414, 1764
Mph1103I ATGCAT 2 cut(s) 438, 959
MroXI GAANNNNTTC 1 cut(s) 2523
MseI TTAA 5 cut(s) 240, 1610, 1950, 2117, 2316
MslI CAYNNNNRTG 3 cut(s) 878, 1210, 1277
MspA1I CMGCKG 3 cut(s) 67, 995, 1331
MspI CCGG 1 cut(s) 1262
MunI CAATTG 2 cut(s) 161, 2154
Mva1269I GAATGC 2 cut(s) 356, 2361
MwoI GCNNNNNNNGC 6 cut(s) 683, 1060, 1298, 1598, 1805, 2356
NcoI CCATGG 1 cut(s) 2512
NdeI CATATG 5 cut(s) 217, 752, 1188, 1207, 1668
NdeII GATC 5 cut(s) 907, 1036, 1672, 2071, 2508
NlaIV GGNNCC 3 cut(s) 76, 2184, 2531
NmeAIII GCCGAG 1 cut(s) 51
NmuCI GTSAC 5 cut(s) 88, 649, 679, 1064, 1818
NsbI TGCGCA 2 cut(s) 130, 1848
NsiI ATGCAT 2 cut(s) 438, 959
NspI RCATGY 5 cut(s) 398, 1185, 1305, 1690, 1853
NspV TTCGAA 1 cut(s) 2353
OliI CACNNNNGTG 1 cut(s) 1277
PciI ACATGT 2 cut(s) 394, 1686
PciSI GCTCTTC 1 cut(s) 636
PctI GAATGC 2 cut(s) 356, 2361
PdmI GAANNNNTTC 1 cut(s) 2523
PfeI GAWTC 5 cut(s) 175, 757, 1368, 1448, 1916
PkrI GCNGC 6 cut(s) 69, 214, 272, 711, 2402, 2624
PleI GAGTC 4 cut(s) 480, 1754, 1988, 2329
PpsI GAGTC 4 cut(s) 480, 1754, 1988, 2329
PscI ACATGT 2 cut(s) 394, 1686
Psp124BI GAGCTC 3 cut(s) 184, 250, 2565
Psp1406I AACGTT 1 cut(s) 612
PspN4I GGNNCC 3 cut(s) 76, 2184, 2531
PspPI GGNCC 3 cut(s) 155, 1003, 2014
PstI CTGCAG 2 cut(s) 557, 2547
PsuI RGATCY 3 cut(s) 907, 2071, 2508
PvuII CAGCTG 1 cut(s) 995
RsaI GTAC 3 cut(s) 813, 2481, 2617
RsaNI GTAC 3 cut(s) 812, 2480, 2616
RseI CAYNNNNRTG 3 cut(s) 878, 1210, 1277
SacI GAGCTC 3 cut(s) 184, 250, 2565
SapI GCTCTTC 1 cut(s) 636
SaqAI TTAA 5 cut(s) 240, 1610, 1950, 2117, 2316
SatI GCNGC 6 cut(s) 68, 213, 271, 710, 2401, 2623
Sau3AI GATC 5 cut(s) 907, 1036, 1672, 2071, 2508
Sau96I GGNCC 3 cut(s) 155, 1003, 2014
ScaI AGTACT 1 cut(s) 2617
SchI GAGTC 4 cut(s) 481, 1755, 1988, 2329
SduI GDGCHC 6 cut(s) 184, 250, 946, 1550, 2185, 2565
SfaNI GCATC 6 cut(s) 445, 731, 784, 1646, 1768, 2023
SfcI CTRYAG 2 cut(s) 553, 2543
SfuI TTCGAA 1 cut(s) 2353
SinI GGWCC 3 cut(s) 155, 1003, 2014
SmiMI CAYNNNNRTG 3 cut(s) 878, 1210, 1277
SmlI CTYRAG 1 cut(s) 2360
SmoI CTYRAG 1 cut(s) 2360
SsiI CCGC 5 cut(s) 67, 1331, 1348, 2162, 2401
SspI AATATT 2 cut(s) 9, 2226
SstI GAGCTC 3 cut(s) 184, 250, 2565
StyI CCWWGG 2 cut(s) 282, 2512
TaaI ACNGT 5 cut(s) 94, 197, 1007, 1462, 2652
TaiI ACGT 7 cut(s) 209, 615, 656, 1397, 1519, 1797, 2271
TatI WGTACW 3 cut(s) 811, 2479, 2615
TauI GCSGC 2 cut(s) 70, 2403
TfiI GAWTC 5 cut(s) 175, 757, 1368, 1448, 1916
Tru1I TTAA 5 cut(s) 240, 1610, 1950, 2117, 2316
Tru9I TTAA 5 cut(s) 240, 1610, 1950, 2117, 2316
TscAI CASTG 5 cut(s) 97, 511, 1284, 1303, 2111
TseFI GTSAC 5 cut(s) 88, 649, 679, 1064, 1818
TseI GCWGC 4 cut(s) 212, 270, 709, 2622
Tsp45I GTSAC 5 cut(s) 88, 649, 679, 1064, 1818
TspDTI ATGAA 6 cut(s) 555, 605, 654, 846, 852, 1112
TspGWI ACGGA 6 cut(s) 37, 88, 1500, 1540, 1607, 2158
TspRI CASTG 5 cut(s) 97, 511, 1284, 1303, 2111
VpaK11BI GGWCC 3 cut(s) 155, 1003, 2014
XapI RAATTY 4 cut(s) 541, 1504, 1655, 2064
XbaI TCTAGA 2 cut(s) 1529, 1984
XceI RCATGY 5 cut(s) 398, 1185, 1305, 1690, 1853
XcmI CCANNNNNNNNNTGG 1 cut(s) 386
XmiI GTMKAC 1 cut(s) 1566
XmnI GAANNNNTTC 1 cut(s) 2523
ZrmI AGTACT 1 cut(s) 2617
Zsp2I ATGCAT 2 cut(s) 438, 959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.