RchiOBHm_Chr1g0359981

Transcriptional Coactivator p15 (PC4)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000258
Physical Location & Seq
Forward (+)
51793520 .. 51796366
2847 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1632 bp
ATGGAGCTGGAGAGTCGCCGGAGAATCGAGGAAACGGTGGTGGACATACTGAGGACGACGAGCTTGGATGAGATGACCGAGTTCAAAGTCCGAGTCGCCGCCTCGGAGCGACTCGGAATCGATCTCTCCGGTGTGGACCGCAAGAGCTTCGTCCGCGGCGTCGTCGAGAGTTTCCTGATTTCGGCCGCGGCGGAGGCGGAGCCGCCGAGCGTTCGGGAAGGGCAGGAGGCGGCGAGGTTGAAGAAGGAGGCGAATGAGGACGGAGAGCGTGTTATTTGTAAGCTGACGAACAGGAGAAACGTGGTGATTCATGATTTCAGAGGGAAAACATTGGTTTCGATTAGGGAATTCTATAAGAAAGGTGGAAAGGAGCTTCCTAGTGCCAGAGGAATTAGCTTGCCAGCTGAACAATGGACAACCTTCAAAAATAGTGTCCCTGCAATAGAGGAAGCAATTAAAAAGATGGAATCGAAGTTAAGATCTGAAATTGATAGTAAACGAACTGAAGACGGTAAAGAAACTGAAGATGGCAAACAAACTGAAGACGGTAAAGAAACTGAAGATGGTAAACAAGTTGAAGATGGCAAACGAACTGAGGGTAGCAAACAAACTGAAGATGGCAAACAAGCTGAAGATGGCAAACAATCTGAAGCTAGCAAACGAATTGAAGATGGCGAACAAAATGGAGATGGTAAACAAACTGAAGATGCTAGACAAAGTGAAGACATGTCTGCTTCACTGAATGATGTTGCTCCTCATGAATTTTTCTCTATTGAAACTTGCCGTTATAATGGGAAGAACTACCCTATCTGGGCACAACAGATGGAGTTTCTGCTAAAGCAATTGAAAATTGCATATGTGCTTTTTGTTTCATGCCCAGTCATTACATTAGGCCCGGAACCAAGTACTGAAGAAATTGCTCAAGCAAAGGCTGCTGAACAGCAATGGAGGAATGATGACTCTGTGTGCCGTCGCAGCATCTTGAATGCTCTATCTGATGATCTGTTAAATCTTTACTCAAGGAGAACTACGACTGCAAAAGAACTGTGGGAAGATCTAAAACAATTGCATCTCTATGAGAAATTTGGAACAAAGAGATCTCTGGTTAAAAAGTATATGGAATTTCAGATGCTTGAAGGAAGACCAGTTTTGGAGCAAATTCAAGAATTTAATAACATTGCCGATTCCATTGTTGCTTCTGGAATGGTGGTCGAGGAAAAATTTCATGTCAGTGTCGTTATCTCCAAGCTTCCCCCATCTTGGAAGGATGTGAGTATCAAGTTGATGTCTGAGGAGCATTTACCTTTTGCAAATATGATGGATCGTTTGAGGTTTGAAGAAAACTTGCGGACCAGGGAGCAGCAGGGGTTACCCATTAATCATGCTGGCAATCCACCAGTGAAACTCATACCAAGGATGAGAGATATGAAGCAGCGAAATATGCAATGGAAGAGGTCAGACCTGGAGATTGATGGTAGAGTTATTTGCCAATTTTGTGGCAAGAAGGGGCACATCTCTCAGAACTGTCGTTATAATAATAAGAGGAAGTTTACCAAGGATGTTAACGATGAGAGTCACGACGGATCTATGCCTATGGAGGTTAACATGCTGGAGGAGACTCTGGATGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DEK_C PC4 Retrotran_gag_2 zf-CCHC

Protein Analysis

543

Amino Acids

62.07

Weight (kDa)

5.58

Isoelectric Point (pI)

62.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEK_C PF08766 5 - 59 1.1e-11 DEK C terminal domain
PC4 PF02229 93 - 143 3.9e-17 Transcriptional Coactivator p15 (PC4)
Retrotran_gag_2 PF14223 302 - 451 1.9e-21 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000258)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00980
fragaria_vesca FvH4_1g25682 FvH4_2g13961 FvH4_2g20162 FvH4_2g24753 FvH4_3g12191 FvH4_3g12632 FvH4_3g16171 FvH4_4g05871 FvH4_4g05873 FvH4_4g10121 FvH4_4g15488 FvH4_4g23911 FvH4_4g27782 FvH4_5g08912 FvH4_5g23001 FvH4_5g24552 FvH4_5g32801 FvH4_5g32802 FvH4_6g05093 FvH4_6g19722 FvH4_6g20391 FvH4_6g33792 FvH4_7g01381 FvH4_7g16761 FvH4_7g16761 FvH4_7g16761
malus_domestica MD01G1082500.v1.1 MD15G1436400.v1.1
prunus_persica Prupe.2G021400_v2.0.a1 Prupe.2G052400_v2.0.a1 Prupe.2G065000_v2.0.a1 Prupe.2G187700_v2.0.a1 Prupe.2G187800_v2.0.a1 Prupe.2G189900_v2.0.a1 Prupe.2G191300_v2.0.a1 Prupe.2G191700_v2.0.a1 Prupe.4G265600_v2.0.a1 Prupe.7G014200_v2.0.a1 Prupe.7G039000_v2.0.a1
pyrus_communis pycom01g05590 pycom01g05910 pycom02g12230 pycom02g25840 pycom03g15580 pycom04g04480 pycom05g09230 pycom05g23350 pycom05g23360 pycom07g08380 pycom09g01980 pycom09g01990 pycom11g18190 pycom11g18200 pycom11g21580 pycom13g04160 pycom15g25800 pycom16g16210 pycom16g17230 pycom16g24560 pycom16g25700 pycom17g11020
rosa_chinensis RchiOBHm_Chr1g0359981 RchiOBHm_Chr2g0151961 RchiOBHm_Chr2g0171331 RchiOBHm_Chr5g0081471 RchiOBHm_Chr6g0283031 RchiOBHm_Chr7g0197111 RchiOBHm_Chr7g0222601
rosa_laevigata RLG00000027843 RLG00000027845 RLG00000030065
rosa_multiflora Rmu_sc0000381.1_g000031 Rmu_sc0001179.1_g000035 Rmu_sc0001616.1_g000046 Rmu_sc0001851.1_g000032 Rmu_sc0002152.1_g000013 Rmu_sc0004031.1_g000015 Rmu_sc0004645.1_g000003 Rmu_sc0007393.1_g000001 Rmu_sc0008949.1_g000003 Rmu_sc0009799.1_g000011 Rmu_sc0011614.1_g000001 Rmu_sc0011699.1_g000009 Rmu_sc0019280.1_g000001 Rmu_sc0023984.1_g000001 Rmu_ssc0000050.1_g000036
rosa_roxburghii Rroxscaffold_1G00022650 Rroxscaffold_1G00033480 Rroxscaffold_3G00270250 Rroxscaffold_4G00296600 Rroxscaffold_4G00296760 Rroxscaffold_6G00409840
rosa_rugosa Rorug01G0273800 Rorug01G0273900 Rorug01G0274000
rosa_samantha Rh1AG287300 Rh1AG288100 Rh1BG253000 Rh1BG253500 Rh1BG399800 Rh1CG270400 Rh1CG271000 Rh1DG282000 Rh1DG282500 Rh4DG126500 Rh5DG194600 Rh5DG461100
rosa_wichuraiana Rw0G009130 Rw1G002590 Rw1G008490 Rw1G012210 Rw1G014290 Rw1G014490 Rw1G025510 Rw2G025840 Rw2G026170 Rw2G036510 Rw3G003050 Rw4G009270 Rw5G002350 Rw5G013930 Rw5G019500 Rw5G025890 Rw5G029960 Rw5G032360 Rw6G009890 Rw6G015670 Rw6G015860 Rw7G010030 Rw7G032600 Rw7G032770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 789, 1533
AccII CGCG 2 cut(s) 156, 188
AclWI GGATC 2 cut(s) 1329, 1591
AcoI YGGCCR 1 cut(s) 183
AcsI RAATTY 7 cut(s) 347, 761, 1082, 1121, 1158, 1166, 1220
AcuI CTGAAG 9 cut(s) 525, 543, 561, 579, 633, 651, 669, 723, 930
AcyI GRCGYC 1 cut(s) 159
AfaI GTAC 1 cut(s) 907
AfiI CCNNNNNNNGG 3 cut(s) 181, 811, 1260
AflIII ACRYGT 1 cut(s) 726
AjnI CCWGG 2 cut(s) 1352, 1461
Alw26I GTCTC 1 cut(s) 1610
AlwI GGATC 2 cut(s) 1329, 1591
AoxI GGCC 2 cut(s) 183, 892
ApeKI GCWGC 4 cut(s) 932, 975, 1360, 1432
ApoI RAATTY 7 cut(s) 347, 761, 1082, 1121, 1158, 1166, 1220
ArsI GACNNNNNNTTYG 4 cut(s) 78, 110, 417, 449
AseI ATTAAT 1 cut(s) 1377
Asp700I GAANNNNTTC 1 cut(s) 1221
AspS9I GGNCC 3 cut(s) 136, 893, 1350
AsuC2I CCSGG 1 cut(s) 896
AsuHPI GGTGA 1 cut(s) 316
AsuNHI GCTAGC 1 cut(s) 653
AvaII GGWCC 2 cut(s) 136, 1350
BaeGI GKGCMC 2 cut(s) 817, 1512
BbsI GAAGAC 4 cut(s) 513, 549, 729, 1147
BbvI GCAGC 4 cut(s) 919, 987, 1372, 1444
BceAI ACGGC 2 cut(s) 768, 954
BcgI CGANNNNNNTGC 2 cut(s) 130, 164
BciT130I CCWGG 2 cut(s) 1354, 1463
BcnI CCSGG 1 cut(s) 896
BcoDI GTCTC 1 cut(s) 1610
BfaI CTAG 3 cut(s) 378, 654, 711
BglII AGATCT 3 cut(s) 479, 1054, 1097
BmcAI AGTACT 1 cut(s) 907
Bme1390I CCNGG 3 cut(s) 896, 1354, 1463
Bme18I GGWCC 2 cut(s) 136, 1350
BmgT120I GGNCC 3 cut(s) 136, 893, 1350
BmiI GGNNCC 2 cut(s) 201, 900
BmrFI CCNGG 3 cut(s) 896, 1354, 1463
BmrI ACTGGG 1 cut(s) 872
BmsI GCATC 4 cut(s) 697, 987, 1078, 1119
BmtI GCTAGC 1 cut(s) 657
BmuI ACTGGG 1 cut(s) 872
BpiI GAAGAC 4 cut(s) 513, 549, 729, 1147
BpmI CTGGAG 3 cut(s) 29, 1484, 1631
BpuEI CTTGAG 2 cut(s) 906, 1003
BpuMI CCSGG 1 cut(s) 896
Bsa29I ATCGAT 1 cut(s) 120
BsaHI GRCGYC 1 cut(s) 159
BsaJI CCNNGG 6 cut(s) 102, 154, 186, 1353, 1412, 1554
BsaWI WCCGGW 1 cut(s) 128
BsaXI ACNNNNNCTCC 2 cut(s) 255, 285
Bsc4I CCNNNNNNNGG 3 cut(s) 181, 811, 1260
Bse1I ACTGG 3 cut(s) 878, 1145, 1397
Bse3DI GCAATG 3 cut(s) 950, 1176, 1451
BseBI CCWGG 2 cut(s) 1354, 1463
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 6 cut(s) 102, 154, 186, 1353, 1412, 1554
BseGI GGATG 5 cut(s) 73, 1273, 1422, 1564, 1630
BseLI CCNNNNNNNGG 3 cut(s) 181, 811, 1260
BseMI GCAATG 3 cut(s) 950, 1176, 1451
BseMII CTCAG 4 cut(s) 41, 585, 1281, 1532
BseNI ACTGG 3 cut(s) 878, 1145, 1397
BseRI GAGGAG 3 cut(s) 744, 1307, 1628
BseSI GKGCMC 2 cut(s) 817, 1512
BseX3I CGGCCG 1 cut(s) 183
BseXI GCAGC 4 cut(s) 919, 987, 1372, 1444
Bsh1236I CGCG 2 cut(s) 156, 188
Bsh1285I CGRYCG 1 cut(s) 186
BshFI GGCC 2 cut(s) 185, 894
BshVI ATCGAT 1 cut(s) 120
BsiEI CGRYCG 1 cut(s) 186
BsiSI CCGG 3 cut(s) 19, 129, 896
BslFI GGGAC 1 cut(s) 419
BslI CCNNNNNNNGG 3 cut(s) 181, 811, 1260
BsmAI GTCTC 1 cut(s) 1610
BsmFI GGGAC 1 cut(s) 419
BsmI GAATGC 1 cut(s) 991
BsnI GGCC 2 cut(s) 185, 894
Bsp1286I GDGCHC 2 cut(s) 817, 1512
Bsp143I GATC 7 cut(s) 121, 479, 1000, 1054, 1097, 1321, 1583
BspANI GGCC 2 cut(s) 185, 894
BspCNI CTCAG 4 cut(s) 42, 586, 1282, 1531
BspDI ATCGAT 1 cut(s) 120
BspFNI CGCG 2 cut(s) 156, 188
BspHI TCATGA 2 cut(s) 310, 757
BspLI GGNNCC 2 cut(s) 201, 900
BspOI GCTAGC 1 cut(s) 657
BspPI GGATC 2 cut(s) 1329, 1591
BsrDI GCAATG 3 cut(s) 950, 1176, 1451
BsrI ACTGG 3 cut(s) 878, 1145, 1397
BssECI CCNNGG 6 cut(s) 102, 154, 186, 1353, 1412, 1554
BssMI GATC 7 cut(s) 121, 479, 1000, 1054, 1097, 1321, 1583
BssNI GRCGYC 1 cut(s) 159
BssT1I CCWWGG 2 cut(s) 1412, 1554
Bst2UI CCWGG 2 cut(s) 1354, 1463
Bst4CI ACNGT 5 cut(s) 37, 512, 548, 1047, 1526
Bst6I CTCTTC 1 cut(s) 1445
BstACI GRCGYC 1 cut(s) 159
BstAPI GCANNNNNTGC 1 cut(s) 932
BstC8I GCNNGC 4 cut(s) 398, 402, 655, 1387
BstDEI CTNAG 4 cut(s) 50, 594, 1290, 1518
BstDSI CCRYGG 2 cut(s) 154, 186
BstEII GGTNACC 1 cut(s) 1368
BstF5I GGATG 5 cut(s) 73, 1273, 1422, 1564, 1630
BstFNI CGCG 2 cut(s) 156, 188
BstKTI GATC 7 cut(s) 124, 482, 1003, 1057, 1100, 1324, 1586
BstMAI GTCTC 1 cut(s) 1610
BstMBI GATC 7 cut(s) 121, 479, 1000, 1054, 1097, 1321, 1583
BstMCI CGRYCG 1 cut(s) 186
BstMWI GCNNNNNNNGC 5 cut(s) 153, 194, 932, 975, 1441
BstNI CCWGG 2 cut(s) 1354, 1463
BstNSI RCATGY 2 cut(s) 730, 1609
BstPI GGTNACC 1 cut(s) 1368
BstSCI CCNGG 3 cut(s) 894, 1352, 1461
BstSLI GKGCMC 2 cut(s) 817, 1512
BstUI CGCG 2 cut(s) 156, 188
BstV1I GCAGC 4 cut(s) 919, 987, 1372, 1444
BstV2I GAAGAC 4 cut(s) 513, 549, 729, 1147
BstX2I RGATCY 4 cut(s) 479, 1054, 1097, 1583
BstXI CCANNNNNNTGG 1 cut(s) 1496
BstYI RGATCY 4 cut(s) 479, 1054, 1097, 1583
BstZI CGGCCG 1 cut(s) 183
Bsu15I ATCGAT 1 cut(s) 120
BsuRI GGCC 2 cut(s) 185, 894
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 2 cut(s) 154, 186
BtsCI GGATG 5 cut(s) 73, 1273, 1422, 1564, 1630
BtsIMutI CAGTG 3 cut(s) 737, 1237, 1404
Cac8I GCNNGC 4 cut(s) 398, 402, 655, 1387
CciI TCATGA 2 cut(s) 310, 757
Cfr13I GGNCC 3 cut(s) 136, 893, 1350
Cfr42I CCGCGG 2 cut(s) 157, 189
ClaI ATCGAT 1 cut(s) 120
CseI GACGC 1 cut(s) 148
Csp6I GTAC 1 cut(s) 906
CviAII CATG 7 cut(s) 311, 727, 758, 873, 1226, 1382, 1606
CviQI GTAC 1 cut(s) 906
DdeI CTNAG 4 cut(s) 50, 594, 1290, 1518
DpnI GATC 7 cut(s) 123, 481, 1002, 1056, 1099, 1323, 1585
DpnII GATC 7 cut(s) 121, 479, 1000, 1054, 1097, 1321, 1583
EaeI YGGCCR 1 cut(s) 183
EagI CGGCCG 1 cut(s) 183
Eam1104I CTCTTC 1 cut(s) 1445
EarI CTCTTC 1 cut(s) 1445
EciI GGCGGA 2 cut(s) 206, 212
EclXI CGGCCG 1 cut(s) 183
Eco130I CCWWGG 2 cut(s) 1412, 1554
Eco47I GGWCC 2 cut(s) 136, 1350
Eco52I CGGCCG 1 cut(s) 183
Eco57I CTGAAG 9 cut(s) 525, 543, 561, 579, 633, 651, 669, 723, 930
Eco91I GGTNACC 1 cut(s) 1368
EcoO65I GGTNACC 1 cut(s) 1368
EcoRI GAATTC 1 cut(s) 347
EcoRII CCWGG 2 cut(s) 1352, 1461
EcoT14I CCWWGG 2 cut(s) 1412, 1554
ErhI CCWWGG 2 cut(s) 1412, 1554
FaeI CATG 7 cut(s) 314, 730, 761, 876, 1229, 1385, 1609
FaqI GGGAC 1 cut(s) 419
FatI CATG 7 cut(s) 310, 726, 757, 872, 1225, 1381, 1605
FauNDI CATATG 1 cut(s) 856
FokI GGATG 4 cut(s) 80, 1280, 1429, 1571
FspBI CTAG 3 cut(s) 378, 654, 711
GsuI CTGGAG 3 cut(s) 29, 1484, 1631
HaeIII GGCC 2 cut(s) 185, 894
HapII CCGG 3 cut(s) 19, 129, 896
HgaI GACGC 1 cut(s) 148
Hin1I GRCGYC 1 cut(s) 159
Hin1II CATG 7 cut(s) 314, 730, 761, 876, 1229, 1385, 1609
HincII GTYRAC 2 cut(s) 1564, 1603
HindII GTYRAC 2 cut(s) 1564, 1603
HindIII AAGCTT 1 cut(s) 1247
HpaI GTTAAC 2 cut(s) 1564, 1603
HpaII CCGG 3 cut(s) 19, 129, 896
HphI GGTGA 1 cut(s) 316
Hpy166II GTNNAC 8 cut(s) 43, 136, 497, 569, 695, 1551, 1564, 1603
Hpy8I GTNNAC 8 cut(s) 43, 136, 497, 569, 695, 1551, 1564, 1603
Hpy99I CGWCG 5 cut(s) 61, 164, 167, 975, 1583
HpyAV CCTTC 6 cut(s) 212, 238, 430, 1130, 1258, 1498
HpyCH4III ACNGT 5 cut(s) 37, 512, 548, 1047, 1526
HpyCH4IV ACGT 1 cut(s) 300
HpyCH4V TGCA 6 cut(s) 440, 854, 1037, 1069, 1310, 1444
HpyF10VI GCNNNNNNNGC 5 cut(s) 153, 194, 932, 975, 1441
HpyF3I CTNAG 4 cut(s) 50, 594, 1290, 1518
HpySE526I ACGT 1 cut(s) 300
Hsp92I GRCGYC 1 cut(s) 159
Hsp92II CATG 7 cut(s) 314, 730, 761, 876, 1229, 1385, 1609
KspAI GTTAAC 2 cut(s) 1564, 1603
KspI CCGCGG 2 cut(s) 157, 189
Kzo9I GATC 7 cut(s) 121, 479, 1000, 1054, 1097, 1321, 1583
LmnI GCTCC 8 cut(s) 4, 106, 199, 370, 757, 1153, 1294, 1357
Lsp1109I GCAGC 4 cut(s) 919, 987, 1372, 1444
LweI GCATC 4 cut(s) 697, 987, 1078, 1119
MaeI CTAG 3 cut(s) 378, 654, 711
MaeII ACGT 1 cut(s) 300
MaeIII GTNAC 2 cut(s) 1368, 1574
MalI GATC 7 cut(s) 123, 481, 1002, 1056, 1099, 1323, 1585
MboI GATC 7 cut(s) 121, 479, 1000, 1054, 1097, 1321, 1583
MfeI CAATTG 2 cut(s) 842, 1064
MflI RGATCY 4 cut(s) 479, 1054, 1097, 1583
MhlI GDGCHC 2 cut(s) 817, 1512
MlyI GAGTC 6 cut(s) 22, 102, 105, 953, 1582, 1612
MroXI GAANNNNTTC 1 cut(s) 1221
MseI TTAA 8 cut(s) 456, 476, 1007, 1107, 1170, 1377, 1563, 1602
MslI CAYNNNNRTG 2 cut(s) 1074, 1230
MspA1I CMGCKG 3 cut(s) 156, 188, 404
MspI CCGG 3 cut(s) 19, 129, 896
MspR9I CCNGG 3 cut(s) 896, 1354, 1463
MunI CAATTG 2 cut(s) 842, 1064
Mva1269I GAATGC 1 cut(s) 991
MvaI CCWGG 2 cut(s) 1354, 1463
MvnI CGCG 2 cut(s) 156, 188
MwoI GCNNNNNNNGC 5 cut(s) 153, 194, 932, 975, 1441
NciI CCSGG 1 cut(s) 896
NdeI CATATG 1 cut(s) 856
NdeII GATC 7 cut(s) 121, 479, 1000, 1054, 1097, 1321, 1583
NheI GCTAGC 1 cut(s) 653
NlaIII CATG 7 cut(s) 314, 730, 761, 876, 1229, 1385, 1609
NlaIV GGNNCC 2 cut(s) 201, 900
NmeAIII GCCGAG 1 cut(s) 231
NmuCI GTSAC 1 cut(s) 1574
NspI RCATGY 2 cut(s) 730, 1609
PagI TCATGA 2 cut(s) 310, 757
PciI ACATGT 1 cut(s) 726
PcsI WCGNNNNNNNCGW 1 cut(s) 156
PctI GAATGC 1 cut(s) 991
PdmI GAANNNNTTC 1 cut(s) 1221
PfeI GAWTC 5 cut(s) 24, 117, 307, 467, 1184
PleI GAGTC 6 cut(s) 21, 101, 105, 953, 1581, 1612
PpsI GAGTC 6 cut(s) 21, 101, 105, 953, 1581, 1612
PscI ACATGT 1 cut(s) 726
PshBI ATTAAT 1 cut(s) 1377
PsiI TTATAA 2 cut(s) 789, 1533
Psp6I CCWGG 2 cut(s) 1352, 1461
PspEI GGTNACC 1 cut(s) 1368
PspGI CCWGG 2 cut(s) 1352, 1461
PspN4I GGNNCC 2 cut(s) 201, 900
PspPI GGNCC 3 cut(s) 136, 893, 1350
PsuI RGATCY 4 cut(s) 479, 1054, 1097, 1583
PvuII CAGCTG 1 cut(s) 404
RsaI GTAC 1 cut(s) 907
RsaNI GTAC 1 cut(s) 906
RseI CAYNNNNRTG 2 cut(s) 1074, 1230
SacII CCGCGG 2 cut(s) 157, 189
SaqAI TTAA 8 cut(s) 456, 476, 1007, 1107, 1170, 1377, 1563, 1602
Sau3AI GATC 7 cut(s) 121, 479, 1000, 1054, 1097, 1321, 1583
Sau96I GGNCC 3 cut(s) 136, 893, 1350
ScaI AGTACT 1 cut(s) 907
SchI GAGTC 6 cut(s) 22, 102, 105, 953, 1582, 1612
ScrFI CCNGG 3 cut(s) 896, 1354, 1463
SduI GDGCHC 2 cut(s) 817, 1512
SfaNI GCATC 4 cut(s) 697, 987, 1078, 1119
Sfr303I CCGCGG 2 cut(s) 157, 189
SgrBI CCGCGG 2 cut(s) 157, 189
SinI GGWCC 2 cut(s) 136, 1350
SmiMI CAYNNNNRTG 2 cut(s) 1074, 1230
SmlI CTYRAG 2 cut(s) 921, 1018
SmoI CTYRAG 2 cut(s) 921, 1018
SspMI CTAG 3 cut(s) 378, 654, 711
StyD4I CCNGG 3 cut(s) 894, 1352, 1461
StyI CCWWGG 2 cut(s) 1412, 1554
TaaI ACNGT 5 cut(s) 37, 512, 548, 1047, 1526
TaiI ACGT 1 cut(s) 303
TaqI TCGA 6 cut(s) 27, 120, 165, 338, 470, 1212
TaqII GACCGA 1 cut(s) 92
TatI WGTACW 1 cut(s) 905
TauI GCSGC 6 cut(s) 101, 159, 188, 191, 205, 233
TfiI GAWTC 5 cut(s) 24, 117, 307, 467, 1184
Tru1I TTAA 8 cut(s) 456, 476, 1007, 1107, 1170, 1377, 1563, 1602
Tru9I TTAA 8 cut(s) 456, 476, 1007, 1107, 1170, 1377, 1563, 1602
TscAI CASTG 3 cut(s) 744, 1237, 1404
TseFI GTSAC 1 cut(s) 1574
TseI GCWGC 4 cut(s) 932, 975, 1360, 1432
Tsp45I GTSAC 1 cut(s) 1574
TspDTI ATGAA 5 cut(s) 299, 774, 861, 1214, 1442
TspGWI ACGGA 2 cut(s) 276, 1596
TspRI CASTG 3 cut(s) 744, 1237, 1404
VpaK11BI GGWCC 2 cut(s) 136, 1350
VspI ATTAAT 1 cut(s) 1377
XapI RAATTY 7 cut(s) 347, 761, 1082, 1121, 1158, 1166, 1220
XceI RCATGY 2 cut(s) 730, 1609
XcmI CCANNNNNNNNNTGG 1 cut(s) 408
XmnI GAANNNNTTC 1 cut(s) 1221
XspI CTAG 3 cut(s) 378, 654, 711
ZrmI AGTACT 1 cut(s) 907
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.