Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 237 |
| AcsI | RAATTY | 2 cut(s) | 20, 396 |
| AcuI | CTGAAG | 1 cut(s) | 152 |
| AgsI | TTSAA | 2 cut(s) | 26, 288 |
| AleI | CACNNNNGTG | 1 cut(s) | 88 |
| AluBI | AGCT | 2 cut(s) | 8, 108 |
| AluI | AGCT | 2 cut(s) | 8, 108 |
| Alw26I | GTCTC | 1 cut(s) | 209 |
| ApeKI | GCWGC | 4 cut(s) | 173, 176, 179, 182 |
| ApoI | RAATTY | 2 cut(s) | 20, 396 |
| AspS9I | GGNCC | 1 cut(s) | 356 |
| AsuHPI | GGTGA | 1 cut(s) | 243 |
| AvaII | GGWCC | 1 cut(s) | 356 |
| BbvI | GCAGC | 4 cut(s) | 185, 188, 191, 194 |
| BccI | CCATC | 1 cut(s) | 257 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 171, 205 |
| BcoDI | GTCTC | 1 cut(s) | 209 |
| BfaI | CTAG | 1 cut(s) | 366 |
| BisI | GCNGC | 4 cut(s) | 174, 177, 180, 183 |
| BlsI | GCNGC | 4 cut(s) | 175, 178, 181, 184 |
| Bme18I | GGWCC | 1 cut(s) | 356 |
| BmgT120I | GGNCC | 1 cut(s) | 356 |
| BmsI | GCATC | 4 cut(s) | 55, 170, 310, 332 |
| Bpu10I | CCTNAGC | 1 cut(s) | 109 |
| BsaI | GGTCTC | 1 cut(s) | 209 |
| BsaJI | CCNNGG | 1 cut(s) | 78 |
| Bse1I | ACTGG | 1 cut(s) | 251 |
| BseDI | CCNNGG | 1 cut(s) | 78 |
| BseGI | GGATG | 4 cut(s) | 46, 161, 323, 325 |
| BseMII | CTCAG | 3 cut(s) | 123, 282, 332 |
| BseNI | ACTGG | 1 cut(s) | 251 |
| BseXI | GCAGC | 4 cut(s) | 185, 188, 191, 194 |
| BseYI | CCCAGC | 1 cut(s) | 125 |
| BsiSI | CCGG | 1 cut(s) | 327 |
| BslFI | GGGAC | 1 cut(s) | 121 |
| BsmAI | GTCTC | 1 cut(s) | 209 |
| BsmFI | GGGAC | 1 cut(s) | 121 |
| Bso31I | GGTCTC | 1 cut(s) | 209 |
| BspACI | CCGC | 1 cut(s) | 237 |
| BspCNI | CTCAG | 3 cut(s) | 122, 283, 333 |
| BspTNI | GGTCTC | 1 cut(s) | 209 |
| BsrI | ACTGG | 1 cut(s) | 251 |
| BssECI | CCNNGG | 1 cut(s) | 78 |
| Bst4CI | ACNGT | 2 cut(s) | 229, 387 |
| BstDEI | CTNAG | 3 cut(s) | 109, 291, 341 |
| BstEII | GGTNACC | 1 cut(s) | 249 |
| BstF5I | GGATG | 4 cut(s) | 46, 161, 323, 325 |
| BstMAI | GTCTC | 1 cut(s) | 209 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 14, 126, 179, 182 |
| BstPI | GGTNACC | 1 cut(s) | 249 |
| BstV1I | GCAGC | 4 cut(s) | 185, 188, 191, 194 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 263 |
| BtgZI | GCGATG | 1 cut(s) | 174 |
| BtsCI | GGATG | 4 cut(s) | 46, 161, 323, 325 |
| BtsI | GCAGTG | 1 cut(s) | 330 |
| BtsIMutI | CAGTG | 2 cut(s) | 330, 383 |
| Cfr13I | GGNCC | 1 cut(s) | 356 |
| CviAII | CATG | 1 cut(s) | 157 |
| CviJI | RGCY | 6 cut(s) | 8, 98, 108, 129, 185, 199 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 98, 108, 129, 185, 199 |
| DdeI | CTNAG | 3 cut(s) | 109, 291, 341 |
| Eco31I | GGTCTC | 1 cut(s) | 209 |
| Eco47I | GGWCC | 1 cut(s) | 356 |
| Eco57I | CTGAAG | 1 cut(s) | 152 |
| Eco91I | GGTNACC | 1 cut(s) | 249 |
| EcoO65I | GGTNACC | 1 cut(s) | 249 |
| EcoT22I | ATGCAT | 1 cut(s) | 325 |
| FaeI | CATG | 1 cut(s) | 160 |
| FaiI | YATR | 4 cut(s) | 30, 118, 158, 354 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 125, 157 |
| FaqI | GGGAC | 1 cut(s) | 121 |
| FatI | CATG | 1 cut(s) | 156 |
| FauI | CCCGC | 1 cut(s) | 230 |
| Fnu4HI | GCNGC | 4 cut(s) | 174, 177, 180, 183 |
| FokI | GGATG | 4 cut(s) | 33, 148, 310, 332 |
| Fsp4HI | GCNGC | 4 cut(s) | 174, 177, 180, 183 |
| FspBI | CTAG | 1 cut(s) | 366 |
| GluI | GCNGC | 4 cut(s) | 174, 177, 180, 183 |
| GsaI | CCCAGC | 1 cut(s) | 129 |
| HapII | CCGG | 1 cut(s) | 327 |
| Hin1II | CATG | 1 cut(s) | 160 |
| HinfI | GANTC | 1 cut(s) | 343 |
| HpaII | CCGG | 1 cut(s) | 327 |
| HphI | GGTGA | 1 cut(s) | 243 |
| Hpy188I | TCNGA | 1 cut(s) | 79 |
| Hpy188III | TCNNGA | 2 cut(s) | 111, 165 |
| HpyAV | CCTTC | 6 cut(s) | 235, 294, 301, 309, 366, 369 |
| HpyCH4III | ACNGT | 2 cut(s) | 229, 387 |
| HpyCH4V | TGCA | 3 cut(s) | 46, 120, 323 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 14, 126, 179, 182 |
| HpyF3I | CTNAG | 3 cut(s) | 109, 291, 341 |
| Hsp92II | CATG | 1 cut(s) | 160 |
| LpnPI | CCDG | 9 cut(s) | 75, 96, 137, 139, 143, 178, 232, 233, 340 |
| Lsp1109I | GCAGC | 4 cut(s) | 185, 188, 191, 194 |
| LweI | GCATC | 4 cut(s) | 55, 170, 310, 332 |
| MaeI | CTAG | 1 cut(s) | 366 |
| MaeIII | GTNAC | 1 cut(s) | 249 |
| MboII | GAAGA | 2 cut(s) | 323, 381 |
| MluCI | AATT | 2 cut(s) | 20, 396 |
| MlyI | GAGTC | 1 cut(s) | 352 |
| MmeI | TCCRAC | 1 cut(s) | 74 |
| MnlI | CCTC | 4 cut(s) | 73, 88, 196, 265 |
| Mph1103I | ATGCAT | 1 cut(s) | 325 |
| MslI | CAYNNNNRTG | 1 cut(s) | 88 |
| MspA1I | CMGCKG | 1 cut(s) | 237 |
| MspI | CCGG | 1 cut(s) | 327 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 14, 126, 179, 182 |
| NlaIII | CATG | 1 cut(s) | 160 |
| NmuCI | GTSAC | 1 cut(s) | 249 |
| NsiI | ATGCAT | 1 cut(s) | 325 |
| OliI | CACNNNNGTG | 1 cut(s) | 88 |
| PkrI | GCNGC | 4 cut(s) | 175, 178, 181, 184 |
| PleI | GAGTC | 1 cut(s) | 351 |
| PpsI | GAGTC | 1 cut(s) | 351 |
| PspEI | GGTNACC | 1 cut(s) | 249 |
| PspFI | CCCAGC | 1 cut(s) | 125 |
| PspPI | GGNCC | 1 cut(s) | 356 |
| RseI | CAYNNNNRTG | 1 cut(s) | 88 |
| SatI | GCNGC | 4 cut(s) | 174, 177, 180, 183 |
| Sau96I | GGNCC | 1 cut(s) | 356 |
| SchI | GAGTC | 1 cut(s) | 352 |
| SetI | ASST | 5 cut(s) | 10, 110, 156, 276, 301 |
| SfaNI | GCATC | 4 cut(s) | 55, 170, 310, 332 |
| SinI | GGWCC | 1 cut(s) | 356 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 88 |
| Sse9I | AATT | 2 cut(s) | 20, 396 |
| SsiI | CCGC | 1 cut(s) | 237 |
| SspMI | CTAG | 1 cut(s) | 366 |
| TaaI | ACNGT | 2 cut(s) | 229, 387 |
| TaqI | TCGA | 1 cut(s) | 305 |
| TasI | AATT | 2 cut(s) | 20, 396 |
| TscAI | CASTG | 2 cut(s) | 337, 390 |
| TseFI | GTSAC | 1 cut(s) | 249 |
| TseI | GCWGC | 4 cut(s) | 173, 176, 179, 182 |
| Tsp45I | GTSAC | 1 cut(s) | 249 |
| TspDTI | ATGAA | 2 cut(s) | 17, 291 |
| TspRI | CASTG | 2 cut(s) | 337, 390 |
| VpaK11BI | GGWCC | 1 cut(s) | 356 |
| XapI | RAATTY | 2 cut(s) | 20, 396 |
| XspI | CTAG | 1 cut(s) | 366 |
| Zsp2I | ATGCAT | 1 cut(s) | 325 |