AT2G22620

Polysaccharide lyase family 4, domain II

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
9604772 .. 9610661
5890 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G22620.1

Sequence Viewer

Length: 2034 bp
ATGAAAGTTGGAGCTCCGGCAAGTAAGCCGGGTCGGATCATTGTTCAAGTTTTTCTTCTACAACTTCTTCTTCTTCTTCAAAGTGTTCATTCACAGAGATCACAAAACAAACTTAACATCACAAAGCCTGGACAAAACATACCAGCCTTAACAGTTCAGCTAAGGAGAGTTGGCCATGATACGGTGGTAGTTGATAATGGTATTGTCCAAGTTACTTTCTCGAACCCAGAAGGCTTAATAACTGGGATAAAATACCATGGTATCGATAATGTGTTGGACGACAAAATTGATGATCGCGGGTATTGGGACGTAGTCTGGTATGAACCGGAAAAGAAACAGAAGACTGACAAATTAGAAGGAACTAAATTTGAAATTATAACTCAGAACGAAGAACAAATTGAAATTTCATTTACAAGAACGTGGACTATCTCTAGACGTGGCTCCTTGGTCCCCCTAAATGTAGATAAAAGATATATTATTCGAAGTGGTGTGTCCGGATTATACATGTACGGTATATTGGAGAGGTTAGAAGGTTGGCCCGACGTGGACATGGACCAAATCAGGATTGTCTTCAAGCTCAACCCAAAAAAATTTGATTTCATGGCGATATCCGATGATCGGCAGAGAAGCATGCCATCGATGGCAGATCGAGAAAATTCTAAGTCATTAGCTTACAAAGAAGCTGTTCTTTTGACAAATCCAAGCAACCCTATGTTCAAAGGAGAGGTGGATGATAAGTATATGTACTCAATGGAAGACAAAGACAACAATGTGCATGGTTGGATCTCATCAGACCCACCTGTTGGGTTTTGGATGATAACTCCGAGCGATGAGTTCCGTCTTGGTGGCCCCATCAAGCAAGACCTCACCTCTCATGCCGGACCCATCACACTCTCCATGTTTACGAGCACGCATTATGCGGGAAAAGAGATGAGAATGGATTATAGAAATGGAGAGCCATGGAAGAAAGTTTTTGGTCCTGTCTTGGCTTATCTCAACTCTGTCTCTCCCAAAGATTCTACTCTTCGTCTCTGGAGAGATGCTAAACGACAGATGGCTGCAGAAGTCAAAAGCTGGCCTTATGATTTTATAACTTCAGAAGATTATCCTCTTCGCCATCAAAGAGGAACTCTCGAAGGTCAATTCTTAATCAAAGACAGTTACGTGTCAAGGTTAAAGATATATGGAAAATTTGCTTTTGTTGGTTTGGCCCCAATTGGTGAAGCTGGTTCATGGCAAACCGAATCAAAGGGTTATCAATTTTGGACGAAAGCTGACAGGAGAGGGAGATTCATAATAGAGAATGTGAGGGCAGGCAATTATAGTCTCTACGCATGGGGGTCTGGTTTTATTGGAGACTATAAGTATGAGCAAAACATTACCATCACGCCAGGTAGCGAGATGAATGTAGGGCCTTTAGTGTATGAACCGCCGAGAAACGGTCCAACATTGTGGGAAATCGGTGTACCGGATCGAACCGCAGGTGAATTCTATATACCGGATCCTTACCCTACACTGATGAATAAGCTTTATGTCAACCCACTCCAAGACAGATTTAGGCAATATGGATTATGGGATCGTTACGCAGATTTATACCCTCAAAACGATCTTGTCTACACAATCGGTGTAAGTGATTATAGAAGTGATTGGTTCTTTGCACATGTGGCGAGAAACGTTGGTAACGATACATACCAACCAACAACATGGCAAATCATATTCAACCTAAAAAACGTGAACCGTATCGGACGCTACACACTCCGAATAGCTCTAGCATCAGCAGCTGATTCGGAACTACAAATCCGAATCAACGATCCGAAATCCGATGCGATTTTCACAACCGGTTTTATCGGAAAGGACAATGCGATCGCAAGACATGGAATTCATGGATTATATAGATTGTATAGTATCGACGTTGCTGGAAATTTACTAAGTGTTGGTGATAATACAATATTTTTAACTCAAACCAGAAGTAGAACACCATTTCAAGGTATTATGTATGACTATATTCGTCTTGAAAGTCCTTTTAGAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

677

Amino Acids

77.62

Weight (kDa)

8.64

Isoelectric Point (pI)

34.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rhamnogal_lyase PF06045 34 - 243 3.8e-107 Rhamnogalacturonate lyase family
fn3_3 PF14686 398 - 469 1e-24 Polysaccharide lyase family 4, domain II
CBM-like PF14683 483 - 671 7e-51 Polysaccharide lyase family 4, domain III
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000523)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65210 AT2G22620 AT2G22620 AT2G22620 AT2G22620 AT2G22620 AT4G37950 AT4G37950 AT4G38030
fragaria_vesca FvH4_1g03290 FvH4_1g03300 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19200
malus_domestica MD01G1043200.v1.1 MD01G1043300.v1.1 MD02G1298500.v1.1 MD02G1307100.v1.1 MD04G1240500.v1.1 MD12G1256900.v1.1 MD12G1257400.v1.1 MD12G1257500.v1.1 MD15G1308100.v1.1 MD15G1308200.v1.1
prunus_persica Prupe.6G208400_v2.0.a1 Prupe.6G208400_v2.0.a1 Prupe.6G208400_v2.0.a1
pyrus_communis pycom01g07080 pycom15g27240
rosa_chinensis RchiOBHm_Chr2g0088421 RchiOBHm_Chr2g0088461 RchiOBHm_Chr2g0088481 RchiOBHm_Chr2g0110401 RchiOBHm_Chr2g0110411 RchiOBHm_Chr2g0110431
rosa_laevigata RLG00000003093 RLG00000015953 RLG00000015956 RLG00000015959 RLG00000017802 RLG00000017806
rosa_multiflora Rmu_sc0001393.1_g000003 Rmu_sc0001393.1_g000009 Rmu_sc0004733.1_g000013 Rmu_sc0004733.1_g000022
rosa_roxburghii Rroxscaffold_2G00133400 Rroxscaffold_2G00133420 Rroxscaffold_2G00152640 Rroxscaffold_2G00152680
rosa_rugosa Rorug01G0484000 Rorug01G0484200 Rorug01G0484600 Rorug02G0166800 Rorug02G0166900 Rorug02G0167000 Rorug02G0167500 Rorug02G0167600 Rorug02G0167800 Rorug02G0167800 Rorug07G0116100
rosa_samantha Rh2AG038500 Rh2AG038800 Rh2AG039000 Rh2AG219300 Rh2AG219400 Rh2BG038100 Rh2BG038400 Rh2BG228800 Rh2BG229000 Rh2CG039000 Rh2CG039600 Rh2CG221000 Rh2CG221200 Rh2DG038600 Rh2DG038800 Rh2DG225500 Rh2DG225600
rosa_wichuraiana Rw2G003060 Rw2G003080 Rw2G016930 Rw2G016940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 377, 1091
AarI CACCTGC 1 cut(s) 1472
Acc36I ACCTGC 1 cut(s) 1472
AccB7I CCANNNNNTGG 1 cut(s) 803
AccI GTMKAC 1 cut(s) 1614
AccII CGCG 1 cut(s) 297
AccIII TCCGGA 1 cut(s) 494
AciI CCGC 4 cut(s) 297, 920, 1430, 1479
AclI AACGTT 1 cut(s) 1674
AclWI GGATC 7 cut(s) 44, 791, 1479, 1496, 1509, 1584, 1805
AcoI YGGCCR 1 cut(s) 172
AcsI RAATTY 8 cut(s) 365, 402, 590, 655, 1190, 1487, 1878, 1921
AcuI CTGAAG 1 cut(s) 1080
AfaI GTAC 3 cut(s) 509, 746, 1467
AfiI CCNNNNNNNGG 5 cut(s) 181, 618, 803, 1439, 1985
AflIII ACRYGT 3 cut(s) 504, 1164, 1660
AgeI ACCGGT 1 cut(s) 1838
AgsI TTSAA 9 cut(s) 47, 80, 371, 401, 574, 718, 1720, 1985, 2015
AjiI CACGTC 2 cut(s) 437, 544
AjnI CCWGG 2 cut(s) 127, 1390
AloI GAACNNNNNNTCC 2 cut(s) 1782, 1814
Alw21I GWGCWC 2 cut(s) 16, 911
Alw26I GTCTC 4 cut(s) 1009, 1034, 1331, 1350
AlwI GGATC 7 cut(s) 44, 791, 1479, 1496, 1509, 1584, 1805
AlwNI CAGNNNCTG 1 cut(s) 1781
Aor13HI TCCGGA 1 cut(s) 494
AoxI GGCC 6 cut(s) 172, 536, 847, 1076, 1209, 1412
ApeKI GCWGC 2 cut(s) 1058, 1778
ApoI RAATTY 8 cut(s) 365, 402, 590, 655, 1190, 1487, 1878, 1921
AsiGI ACCGGT 1 cut(s) 1838
AsiSI GCGATCGC 1 cut(s) 1866
Asp700I GAANNNNTTC 1 cut(s) 684
AspS9I GGNCC 9 cut(s) 448, 537, 553, 848, 881, 977, 1210, 1412, 1442
AsuC2I CCSGG 1 cut(s) 30
AsuHPI GGTGA 4 cut(s) 859, 1232, 1496, 1949
AsuII TTCGAA 1 cut(s) 481
AvaII GGWCC 5 cut(s) 448, 553, 881, 977, 1442
BaeI ACNNNNGTAYC 4 cut(s) 171, 204, 244, 277
BalI TGGCCA 1 cut(s) 174
BamHI GGATCC 1 cut(s) 1501
BanII GRGCYC 1 cut(s) 16
BbsI GAAGAC 3 cut(s) 347, 562, 762
Bbv12I GWGCWC 2 cut(s) 16, 911
BbvI GCAGC 2 cut(s) 1045, 1790
BccI CCATC 7 cut(s) 634, 643, 860, 893, 1048, 1125, 1391
BcgI CGANNNNNNTGC 2 cut(s) 1767, 1801
BciT130I CCWGG 2 cut(s) 129, 1392
BcnI CCSGG 1 cut(s) 30
BcoDI GTCTC 4 cut(s) 1009, 1034, 1331, 1350
BfaI CTAG 2 cut(s) 432, 1769
BfmI CTRYAG 1 cut(s) 1059
BfuAI ACCTGC 1 cut(s) 1472
BisI GCNGC 2 cut(s) 1059, 1779
BlsI GCNGC 2 cut(s) 1060, 1780
Bme1390I CCNGG 3 cut(s) 30, 129, 1392
Bme18I GGWCC 5 cut(s) 448, 553, 881, 977, 1442
BmgBI CACGTC 2 cut(s) 437, 544
BmgT120I GGNCC 9 cut(s) 448, 537, 553, 848, 881, 977, 1210, 1412, 1442
BmiI GGNNCC 6 cut(s) 442, 450, 850, 883, 1212, 1503
BmrFI CCNGG 3 cut(s) 30, 129, 1392
BmrI ACTGGG 1 cut(s) 252
BmsI GCATC 3 cut(s) 1030, 1781, 1813
BmuI ACTGGG 1 cut(s) 252
BpiI GAAGAC 3 cut(s) 347, 562, 762
BplI GAGNNNNNCTC 2 cut(s) 1116, 1148
BpmI CTGGAG 1 cut(s) 1054
Bpu10I CCTNAGC 1 cut(s) 161
Bpu14I TTCGAA 1 cut(s) 481
BpuMI CCSGG 1 cut(s) 30
Bsa29I ATCGAT 2 cut(s) 264, 638
BsaAI YACGTR 1 cut(s) 1165
BsaJI CCNNGG 3 cut(s) 256, 444, 959
BsaWI WCCGGW 5 cut(s) 325, 494, 1468, 1498, 1838
Bsc4I CCNNNNNNNGG 5 cut(s) 181, 618, 803, 1439, 1985
Bse118I RCCGGY 1 cut(s) 1838
Bse1I ACTGG 1 cut(s) 247
BseAI TCCGGA 1 cut(s) 494
BseBI CCWGG 2 cut(s) 129, 1392
BseCI ATCGAT 2 cut(s) 264, 638
BseDI CCNNGG 3 cut(s) 256, 444, 959
BseGI GGATG 2 cut(s) 736, 819
BseLI CCNNNNNNNGG 5 cut(s) 181, 618, 803, 1439, 1985
BseMII CTCAG 1 cut(s) 395
BseNI ACTGG 1 cut(s) 247
BseXI GCAGC 2 cut(s) 1045, 1790
Bsh1236I CGCG 1 cut(s) 297
Bsh1285I CGRYCG 1 cut(s) 1866
BshFI GGCC 6 cut(s) 174, 538, 849, 1078, 1211, 1414
BshTI ACCGGT 1 cut(s) 1838
BshVI ATCGAT 2 cut(s) 264, 638
BsiEI CGRYCG 1 cut(s) 1866
BsiHKAI GWGCWC 2 cut(s) 16, 911
BsiSI CCGG 8 cut(s) 17, 29, 326, 495, 879, 1469, 1499, 1839
BslFI GGGAC 2 cut(s) 320, 434
BslI CCNNNNNNNGG 5 cut(s) 181, 618, 803, 1439, 1985
BsmAI GTCTC 4 cut(s) 1009, 1034, 1331, 1350
BsmBI CGTCTC 1 cut(s) 1034
BsmFI GGGAC 2 cut(s) 320, 434
BsnI GGCC 6 cut(s) 174, 538, 849, 1078, 1211, 1414
Bsp119I TTCGAA 1 cut(s) 481
Bsp1286I GDGCHC 2 cut(s) 16, 911
Bsp13I TCCGGA 1 cut(s) 494
Bsp19I CCATGG 2 cut(s) 256, 959
BspACI CCGC 4 cut(s) 297, 920, 1430, 1479
BspANI GGCC 6 cut(s) 174, 538, 849, 1078, 1211, 1414
BspCNI CTCAG 1 cut(s) 394
BspDI ATCGAT 2 cut(s) 264, 638
BspEI TCCGGA 1 cut(s) 494
BspFNI CGCG 1 cut(s) 297
BspLI GGNNCC 6 cut(s) 442, 450, 850, 883, 1212, 1503
BspMAI CTGCAG 1 cut(s) 1063
BspMI ACCTGC 1 cut(s) 1472
BspPI GGATC 7 cut(s) 44, 791, 1479, 1496, 1509, 1584, 1805
BspT104I TTCGAA 1 cut(s) 481
BsrFI RCCGGY 1 cut(s) 1838
BsrI ACTGG 1 cut(s) 247
BssAI RCCGGY 1 cut(s) 1838
BssECI CCNNGG 3 cut(s) 256, 444, 959
BssT1I CCWWGG 3 cut(s) 256, 444, 959
Bst2UI CCWGG 2 cut(s) 129, 1392
Bst4CI ACNGT 6 cut(s) 154, 184, 512, 1160, 1442, 1739
Bst6I CTCTTC 2 cut(s) 1029, 1116
BstBAI YACGTR 1 cut(s) 1165
BstBI TTCGAA 1 cut(s) 481
BstC8I GCNNGC 4 cut(s) 632, 911, 1076, 1315
BstDEI CTNAG 4 cut(s) 161, 381, 660, 1928
BstDSI CCRYGG 2 cut(s) 256, 959
BstF5I GGATG 2 cut(s) 736, 819
BstFNI CGCG 1 cut(s) 297
BstMAI GTCTC 4 cut(s) 1009, 1034, 1331, 1350
BstMCI CGRYCG 1 cut(s) 1866
BstMWI GCNNNNNNNGC 2 cut(s) 1664, 1778
BstNI CCWGG 2 cut(s) 129, 1392
BstNSI RCATGY 3 cut(s) 508, 634, 1664
BstSCI CCNGG 3 cut(s) 28, 127, 1390
BstSFI CTRYAG 1 cut(s) 1059
BstUI CGCG 1 cut(s) 297
BstV1I GCAGC 2 cut(s) 1045, 1790
BstV2I GAAGAC 3 cut(s) 347, 562, 762
BstX2I RGATCY 2 cut(s) 783, 1501
BstXI CCANNNNNNTGG 2 cut(s) 1452, 1704
BstYI RGATCY 2 cut(s) 783, 1501
Bsu15I ATCGAT 2 cut(s) 264, 638
BsuRI GGCC 6 cut(s) 174, 538, 849, 1078, 1211, 1414
BsuTUI ATCGAT 2 cut(s) 264, 638
BtgI CCRYGG 2 cut(s) 256, 959
BtgZI GCGATG 1 cut(s) 843
BtrI CACGTC 2 cut(s) 437, 544
BtsCI GGATG 2 cut(s) 736, 819
BtsIMutI CAGTG 1 cut(s) 1514
BveI ACCTGC 1 cut(s) 1472
Cac8I GCNNGC 4 cut(s) 632, 911, 1076, 1315
CaiI CAGNNNCTG 1 cut(s) 1781
Cfr10I RCCGGY 1 cut(s) 1838
Cfr13I GGNCC 9 cut(s) 448, 537, 553, 848, 881, 977, 1210, 1412, 1442
ClaI ATCGAT 2 cut(s) 264, 638
CseI GACGC 1 cut(s) 1755
Csp6I GTAC 3 cut(s) 508, 745, 1466
CspAI ACCGGT 1 cut(s) 1838
CviQI GTAC 3 cut(s) 508, 745, 1466
DdeI CTNAG 4 cut(s) 161, 381, 660, 1928
EaeI YGGCCR 1 cut(s) 172
Eam1104I CTCTTC 2 cut(s) 1029, 1116
EarI CTCTTC 2 cut(s) 1029, 1116
Ecl136II GAGCTC 1 cut(s) 14
Eco130I CCWWGG 3 cut(s) 256, 444, 959
Eco24I GRGCYC 1 cut(s) 16
Eco32I GATATC 1 cut(s) 609
Eco47I GGWCC 5 cut(s) 448, 553, 881, 977, 1442
Eco53kI GAGCTC 1 cut(s) 14
Eco57I CTGAAG 1 cut(s) 1080
EcoICRI GAGCTC 1 cut(s) 14
EcoO109I RGGNCCY 1 cut(s) 1412
EcoRI GAATTC 2 cut(s) 1487, 1878
EcoRII CCWGG 2 cut(s) 127, 1390
EcoRV GATATC 1 cut(s) 609
EcoT14I CCWWGG 3 cut(s) 256, 444, 959
EcoT38I GRGCYC 1 cut(s) 16
ErhI CCWWGG 3 cut(s) 256, 444, 959
Esp3I CGTCTC 1 cut(s) 1034
FalI AAGNNNNNCTT 6 cut(s) 39, 71, 672, 704, 1063, 1095
FaqI GGGAC 2 cut(s) 320, 434
FauI CCCGC 2 cut(s) 290, 913
FblI GTMKAC 1 cut(s) 1614
Fnu4HI GCNGC 2 cut(s) 1059, 1779
FokI GGATG 2 cut(s) 743, 826
FriOI GRGCYC 1 cut(s) 16
Fsp4HI GCNGC 2 cut(s) 1059, 1779
FspBI CTAG 2 cut(s) 432, 1769
GluI GCNGC 2 cut(s) 1059, 1779
GsuI CTGGAG 1 cut(s) 1054
HaeIII GGCC 6 cut(s) 174, 538, 849, 1078, 1211, 1414
HapII CCGG 8 cut(s) 17, 29, 326, 495, 879, 1469, 1499, 1839
HgaI GACGC 1 cut(s) 1755
HincII GTYRAC 1 cut(s) 1537
HindII GTYRAC 1 cut(s) 1537
HindIII AAGCTT 1 cut(s) 1526
HinfI GANTC 5 cut(s) 1016, 1244, 1290, 1784, 1803
HpaII CCGG 8 cut(s) 17, 29, 326, 495, 879, 1469, 1499, 1839
HphI GGTGA 4 cut(s) 859, 1232, 1496, 1949
Hpy166II GTNNAC 7 cut(s) 423, 547, 903, 1466, 1537, 1615, 1735
Hpy188III TCNNGA 8 cut(s) 220, 432, 495, 562, 650, 1033, 1133, 2012
Hpy8I GTNNAC 7 cut(s) 423, 547, 903, 1466, 1537, 1615, 1735
Hpy99I CGWCG 2 cut(s) 545, 1913
HpyAV CCTTC 4 cut(s) 224, 350, 524, 1130
HpyCH4III ACNGT 6 cut(s) 154, 184, 512, 1160, 1442, 1739
HpyCH4IV ACGT 8 cut(s) 309, 419, 436, 543, 1164, 1674, 1731, 1911
HpyCH4V TGCA 3 cut(s) 775, 1061, 1658
HpyF10VI GCNNNNNNNGC 2 cut(s) 1664, 1778
HpyF3I CTNAG 4 cut(s) 161, 381, 660, 1928
HpySE526I ACGT 8 cut(s) 309, 419, 436, 543, 1164, 1674, 1731, 1911
Kpn2I TCCGGA 1 cut(s) 494
LmnI GCTCC 3 cut(s) 11, 19, 446
Lsp1109I GCAGC 2 cut(s) 1045, 1790
LweI GCATC 3 cut(s) 1030, 1781, 1813
MaeI CTAG 2 cut(s) 432, 1769
MaeII ACGT 8 cut(s) 309, 419, 436, 543, 1164, 1674, 1731, 1911
MaeIII GTNAC 4 cut(s) 211, 1160, 1580, 1679
MfeI CAATTG 1 cut(s) 1215
MflI RGATCY 2 cut(s) 783, 1501
MhlI GDGCHC 2 cut(s) 16, 911
MlsI TGGCCA 1 cut(s) 174
MluNI TGGCCA 1 cut(s) 174
MmeI TCCRAC 4 cut(s) 14, 255, 761, 1469
MnlI CCTC 9 cut(s) 516, 718, 875, 880, 1118, 1119, 1277, 1302, 1608
Mox20I TGGCCA 1 cut(s) 174
MroI TCCGGA 1 cut(s) 494
MroXI GAANNNNTTC 1 cut(s) 684
MscI TGGCCA 1 cut(s) 174
MseI TTAA 6 cut(s) 114, 149, 236, 1148, 1175, 1955
Msp20I TGGCCA 1 cut(s) 174
MspA1I CMGCKG 1 cut(s) 1781
MspI CCGG 8 cut(s) 17, 29, 326, 495, 879, 1469, 1499, 1839
MspR9I CCNGG 3 cut(s) 30, 129, 1392
MunI CAATTG 1 cut(s) 1215
MvaI CCWGG 2 cut(s) 129, 1392
MvnI CGCG 1 cut(s) 297
MwoI GCNNNNNNNGC 2 cut(s) 1664, 1778
NciI CCSGG 1 cut(s) 30
NcoI CCATGG 2 cut(s) 256, 959
NlaIV GGNNCC 6 cut(s) 442, 450, 850, 883, 1212, 1503
NmeAIII GCCGAG 1 cut(s) 1458
NspI RCATGY 3 cut(s) 508, 634, 1664
NspV TTCGAA 1 cut(s) 481
PaeI GCATGC 1 cut(s) 634
PaqCI CACCTGC 1 cut(s) 1472
PciI ACATGT 2 cut(s) 504, 1660
PcsI WCGNNNNNNNCGW 1 cut(s) 1680
PdmI GAANNNNTTC 1 cut(s) 684
PfeI GAWTC 5 cut(s) 1016, 1244, 1290, 1784, 1803
PflFI GACNNNGTC 1 cut(s) 311
PflMI CCANNNNNTGG 1 cut(s) 803
PinAI ACCGGT 1 cut(s) 1838
PkrI GCNGC 2 cut(s) 1060, 1780
Ple19I CGATCG 1 cut(s) 1866
Ppu21I YACGTR 1 cut(s) 1165
PscI ACATGT 2 cut(s) 504, 1660
PsiI TTATAA 2 cut(s) 377, 1091
Psp124BI GAGCTC 1 cut(s) 16
Psp1406I AACGTT 1 cut(s) 1674
Psp6I CCWGG 2 cut(s) 127, 1390
PspGI CCWGG 2 cut(s) 127, 1390
PspN4I GGNNCC 6 cut(s) 442, 450, 850, 883, 1212, 1503
PspPI GGNCC 9 cut(s) 448, 537, 553, 848, 881, 977, 1210, 1412, 1442
PstI CTGCAG 1 cut(s) 1063
PstNI CAGNNNCTG 1 cut(s) 1781
PsuI RGATCY 2 cut(s) 783, 1501
PsyI GACNNNGTC 1 cut(s) 311
PvuI CGATCG 1 cut(s) 1866
PvuII CAGCTG 1 cut(s) 1781
RgaI GCGATCGC 1 cut(s) 1866
RsaI GTAC 3 cut(s) 509, 746, 1467
RsaNI GTAC 3 cut(s) 508, 745, 1466
SacI GAGCTC 1 cut(s) 16
SaqAI TTAA 6 cut(s) 114, 149, 236, 1148, 1175, 1955
SatI GCNGC 2 cut(s) 1059, 1779
Sau96I GGNCC 9 cut(s) 448, 537, 553, 848, 881, 977, 1210, 1412, 1442
ScrFI CCNGG 3 cut(s) 30, 129, 1392
SduI GDGCHC 2 cut(s) 16, 911
SfaAI GCGATCGC 1 cut(s) 1866
SfaNI GCATC 3 cut(s) 1030, 1781, 1813
SfcI CTRYAG 1 cut(s) 1059
SfuI TTCGAA 1 cut(s) 481
SgfI GCGATCGC 1 cut(s) 1866
SinI GGWCC 5 cut(s) 448, 553, 881, 977, 1442
SphI GCATGC 1 cut(s) 634
SsiI CCGC 4 cut(s) 297, 920, 1430, 1479
SspI AATATT 1 cut(s) 1950
SspMI CTAG 2 cut(s) 432, 1769
SstI GAGCTC 1 cut(s) 16
StyD4I CCNGG 3 cut(s) 28, 127, 1390
StyI CCWWGG 3 cut(s) 256, 444, 959
TaaI ACNGT 6 cut(s) 154, 184, 512, 1160, 1442, 1739
TaiI ACGT 8 cut(s) 312, 422, 439, 546, 1167, 1677, 1734, 1914
TaqI TCGA 8 cut(s) 221, 264, 481, 638, 649, 1134, 1474, 1908
TatI WGTACW 1 cut(s) 744
TfiI GAWTC 5 cut(s) 1016, 1244, 1290, 1784, 1803
Tru1I TTAA 6 cut(s) 114, 149, 236, 1148, 1175, 1955
Tru9I TTAA 6 cut(s) 114, 149, 236, 1148, 1175, 1955
TscAI CASTG 1 cut(s) 1521
TseI GCWGC 2 cut(s) 1058, 1778
TspGWI ACGGA 1 cut(s) 827
TspRI CASTG 1 cut(s) 1521
Tth111I GACNNNGTC 1 cut(s) 311
Van91I CCANNNNNTGG 1 cut(s) 803
VpaK11BI GGWCC 5 cut(s) 448, 553, 881, 977, 1442
XapI RAATTY 8 cut(s) 365, 402, 590, 655, 1190, 1487, 1878, 1921
XbaI TCTAGA 1 cut(s) 431
XceI RCATGY 3 cut(s) 508, 634, 1664
XmiI GTMKAC 1 cut(s) 1614
XmnI GAANNNNTTC 1 cut(s) 684
XspI CTAG 2 cut(s) 432, 1769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.