Prupe.6G208400_v2.0.a1

Rhamnogalacturonate lyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000523
Physical Location & Seq
Reverse (-)
21683643 .. 21690383
6741 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G208400.3

Sequence Viewer

Length: 2037 bp
ATGTCATTTAACCTAAAGCAATGGAGCTGGGTTCTTGGGTCATTCGCAATGCTTGCCTTGTTTTCCTTGTCCCGTGACGATCACGGTTCCGTGAGGACCCCCCCAGTAAGAAGAGAACTAAGGAGCGTTTCTAGACGAGATAATACGTACAATCAGATGCTATCGAAGACTGATAATCAGGTGGTGCTTAATAATGGCCTTGTCCAACTCACTTTTTCTTATCCCGGAGGAGACGTCATTGGCATCAAGTACAAGGGAATTGACAACTTGCTTGACATCAAGAACCAGCCAAGCAATAGAGGGTACTGGGATCTTGTCTGGAACAAGCGGGGAGAAAAAGGTGGTGTGGACAAGCTACAAGGAACAAGATTTAAAGTTGTTAGAACGACGTCAGATCAAATAGAGATTTCTTTTACTAAAACCTACAGTCATTCCCTCGGTAACGCCTCAGTTCCCTTGAATGTTGACAAAAGGTACATAATGCAGCGCGGTCGCTCTGGGTTCTATGCCTACGCCATTTTCGAGCGCCTCAAAGGGATGCCGGAGGTAGATATGGATCAAATTAGAATTGTTTACAAGCTTCAACAAGACAAATTTCGGTACATGGCTATATCTGACGACAGGAAAAGGGTCATGCCAACAGCCGATGACCGTGCAAATGGTCTGCCCCTTGCCTATCCCGAAGCTGTTCTTTTAACCAATCCCAGCAATCCTGACTTTAGAGGAGAGGTGGATGACAAATACCAATACTCAAGTGAGGACAAAGATAACAAGGTCCATGGTTGGATTTGTAAAGACCCAGCTGTGGGCTTCTGGATCATTACACCCAGTGATGAGTTCCGTACCGCTGGGCCCTTCAAGCAGGACCTCACCTCCCATGTGGGCCCAACTGCCCTCTCTATGTTTGTTAGTACCCATTATGCTGGGAAGGAAGTTGGAATGACATTTCGAGATGGTGAGGCATGGAAGAAAGTTTTTGGGCCAGTCTTTATCCATCTCAATTCAGCTCCAAGCTCAAATGAATATCTCACACTCTGGGAAAATGCTAAAGAGCAGTTGGTTGAAGAAATGCAAAGATGGCCATACAATTTCACTCAATCAAAAGACTTTCTCAGCTCTGATCAACGTGGATCCGTTGCCGGTCAATTACTAGTTCGGGATCGGTACAGGAATAAGAGGCTTATTTGGGCAAGCTCCGCTTATGTGGGATTGGCTGCACCTGGAAATGCAGGATCATGGCAAAAGGAAAGCAAGGGTTATCAGTTCTGGACTCAAGCCAACAAGCAAGGTTATTTCCTCATTAAAGATGTTCGACCTGGGAACTATAGCTTGTATGCAACTGTTCCTGGCTTTATTGGGGATTACAAATATGAGGCTAATATTATAATTCAACCAGGAAAAGAAATTAATTTGGCTGATCTTACTTACGAACCTCCAAGAAATGGCCCAACCCTGTGGGAAATCGGCATCCCGGATCGATCAGCTGCTGAGTTCAACGTACCAGATCCGTCTCCAACCCTTATGAACCAATTGTACACCAATCACACAGACAAGTTTAGGCAATACGGCTTGTGGGAACGATACTCAGATTTATACCCTAACCATGATCTCATCTACACCGTTGGTACTGACAATTACCCTGATGATTGGTTCTTCGCTCATGTGACCAGGAACACAGGAAATCAAACGTATGAACCAACCACATGGCAAATTCGATTTCAACTTAATAAGGGGGCGAATCCTGGAAATTATACACTGCAATTGGCATTGGCCTCAGCCACTAATGCAGAAGTGCAGGTTCGGGTTAACGATTGGAGCGCAAACCCACCTCATTTTACAACAGGGCTAATCGGGAAGGACAATGCCATAGCAAGACATGGAATTCATGGTTTGTACTGGTTGTTCAGTGTTGGTCTACGAAACGATCGGCTACAAGAAGGAAACAACACCATCTATCTCACTCAGTCAAGACACAAGACAACTTTCGACGGCATCATGTATGACTATCTGCGATTAGAAGGACCTCCTCAAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

679

Amino Acids

77.58

Weight (kDa)

8.59

Isoelectric Point (pI)

32.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000523)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65210 AT2G22620 AT2G22620 AT2G22620 AT2G22620 AT2G22620 AT4G37950 AT4G37950 AT4G38030
fragaria_vesca FvH4_1g03290 FvH4_1g03300 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19200
malus_domestica MD01G1043200.v1.1 MD01G1043300.v1.1 MD02G1298500.v1.1 MD02G1307100.v1.1 MD04G1240500.v1.1 MD12G1256900.v1.1 MD12G1257400.v1.1 MD12G1257500.v1.1 MD15G1308100.v1.1 MD15G1308200.v1.1
prunus_persica Prupe.6G208400_v2.0.a1 Prupe.6G208400_v2.0.a1 Prupe.6G208400_v2.0.a1
pyrus_communis pycom01g07080 pycom15g27240
rosa_chinensis RchiOBHm_Chr2g0088421 RchiOBHm_Chr2g0088461 RchiOBHm_Chr2g0088481 RchiOBHm_Chr2g0110401 RchiOBHm_Chr2g0110411 RchiOBHm_Chr2g0110431
rosa_laevigata RLG00000003093 RLG00000015953 RLG00000015956 RLG00000015959 RLG00000017802 RLG00000017806
rosa_multiflora Rmu_sc0001393.1_g000003 Rmu_sc0001393.1_g000009 Rmu_sc0004733.1_g000013 Rmu_sc0004733.1_g000022
rosa_roxburghii Rroxscaffold_2G00133400 Rroxscaffold_2G00133420 Rroxscaffold_2G00152640 Rroxscaffold_2G00152680
rosa_rugosa Rorug01G0484000 Rorug01G0484200 Rorug01G0484600 Rorug02G0166800 Rorug02G0166900 Rorug02G0167000 Rorug02G0167500 Rorug02G0167600 Rorug02G0167800 Rorug02G0167800 Rorug07G0116100
rosa_samantha Rh2AG038500 Rh2AG038800 Rh2AG039000 Rh2AG219300 Rh2AG219400 Rh2BG038100 Rh2BG038400 Rh2BG228800 Rh2BG229000 Rh2CG039000 Rh2CG039600 Rh2CG221000 Rh2CG221200 Rh2DG038600 Rh2DG038800 Rh2DG225500 Rh2DG225600
rosa_wichuraiana Rw2G003060 Rw2G003080 Rw2G016930 Rw2G016940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1385
AatII GACGTC 2 cut(s) 237, 392
Acc36I ACCTGC 1 cut(s) 1786
AccB7I CCANNNNNTGG 1 cut(s) 1442
AccI GTMKAC 1 cut(s) 1915
AccII CGCG 1 cut(s) 489
AciI CCGC 4 cut(s) 328, 489, 846, 1197
AclWI GGATC 9 cut(s) 318, 564, 824, 1125, 1138, 1167, 1240, 1482, 1499
AcoI YGGCCR 1 cut(s) 1079
AcsI RAATTY 3 cut(s) 593, 1710, 1881
AcyI GRCGYC 2 cut(s) 234, 389
AdeI CACNNNGTG 1 cut(s) 830
AfiI CCNNNNNNNGG 3 cut(s) 805, 806, 1442
AgsI TTSAA 7 cut(s) 460, 584, 859, 1064, 1391, 1495, 1721
AhlI ACTAGT 1 cut(s) 1150
AjnI CCWGG 6 cut(s) 1219, 1315, 1345, 1393, 1667, 1741
Alw26I GTCTC 2 cut(s) 225, 1515
AlwI GGATC 9 cut(s) 318, 564, 824, 1125, 1138, 1167, 1240, 1482, 1499
AlwNI CAGNNNCTG 1 cut(s) 1487
AoxI GGCC 7 cut(s) 196, 851, 883, 980, 1079, 1444, 1770
ApaI GGGCCC 2 cut(s) 855, 887
ApeKI GCWGC 3 cut(s) 484, 1214, 1484
ApoI RAATTY 3 cut(s) 593, 1710, 1881
AseI ATTAAT 1 cut(s) 1407
Asp700I GAANNNNTTC 1 cut(s) 687
AspLEI GCGC 3 cut(s) 489, 528, 1820
AsuC2I CCSGG 2 cut(s) 225, 1472
AsuHPI GGTGA 2 cut(s) 862, 968
AvaII GGWCC 4 cut(s) 96, 775, 865, 2021
BaeGI GKGCMC 2 cut(s) 855, 887
BalI TGGCCA 1 cut(s) 1081
BamHI GGATCC 1 cut(s) 1130
BanII GRGCYC 2 cut(s) 855, 887
BbsI GAAGAC 1 cut(s) 173
BbvCI CCTCAGC 1 cut(s) 1774
BbvI GCAGC 3 cut(s) 496, 1201, 1471
BccI CCATC 4 cut(s) 947, 1002, 1071, 1958
BceAI ACGGC 2 cut(s) 1582, 2005
BcgI CGANNNNNNTGC 4 cut(s) 473, 507, 635, 669
BciT130I CCWGG 6 cut(s) 1221, 1317, 1347, 1395, 1669, 1743
BclI TGATCA 1 cut(s) 1120
BcnI CCSGG 2 cut(s) 225, 1472
BcoDI GTCTC 2 cut(s) 225, 1515
BcuI ACTAGT 1 cut(s) 1150
BfaI CTAG 2 cut(s) 132, 1151
BfmI CTRYAG 2 cut(s) 424, 1324
BfoI RGCGCY 1 cut(s) 529
BfuAI ACCTGC 1 cut(s) 1786
BisI GCNGC 3 cut(s) 485, 1215, 1485
BlsI GCNGC 3 cut(s) 486, 1216, 1486
Bme1390I CCNGG 8 cut(s) 225, 1221, 1317, 1347, 1395, 1472, 1669, 1743
Bme18I GGWCC 4 cut(s) 96, 775, 865, 2021
BmiI GGNNCC 5 cut(s) 88, 98, 853, 885, 1132
BmrFI CCNGG 8 cut(s) 225, 1221, 1317, 1347, 1395, 1472, 1669, 1743
BmrI ACTGGG 3 cut(s) 98, 316, 822
BmsI GCATC 5 cut(s) 147, 252, 528, 1476, 2001
BmuI ACTGGG 3 cut(s) 98, 316, 822
BpiI GAAGAC 1 cut(s) 173
Bpu10I CCTNAGC 1 cut(s) 1774
BpuEI CTTGAG 3 cut(s) 736, 1257, 2013
BpuMI CCSGG 2 cut(s) 225, 1472
Bsa29I ATCGAT 1 cut(s) 1477
BsaAI YACGTR 1 cut(s) 147
BsaBI GATNNNNATC 1 cut(s) 555
BsaHI GRCGYC 2 cut(s) 234, 389
BsaJI CCNNGG 3 cut(s) 436, 778, 1316
BsaXI ACNNNNNCTCC 4 cut(s) 219, 249, 857, 887
Bsc4I CCNNNNNNNGG 3 cut(s) 805, 806, 1442
Bse118I RCCGGY 1 cut(s) 1139
Bse1I ACTGG 5 cut(s) 104, 311, 828, 983, 1901
Bse3DI GCAATG 2 cut(s) 26, 54
Bse8I GATNNNNATC 1 cut(s) 555
BseBI CCWGG 6 cut(s) 1221, 1317, 1347, 1395, 1669, 1743
BseCI ATCGAT 1 cut(s) 1477
BseDI CCNNGG 3 cut(s) 436, 778, 1316
BseGI GGATG 3 cut(s) 543, 739, 1467
BseJI GATNNNNATC 1 cut(s) 555
BseLI CCNNNNNNNGG 3 cut(s) 805, 806, 1442
BseMI GCAATG 2 cut(s) 26, 54
BseMII CTCAG 6 cut(s) 462, 1126, 1479, 1599, 1788, 1976
BseNI ACTGG 5 cut(s) 104, 311, 828, 983, 1901
BseRI GAGGAG 3 cut(s) 243, 738, 2016
BseSI GKGCMC 2 cut(s) 855, 887
BseXI GCAGC 3 cut(s) 496, 1201, 1471
BseYI CCCAGC 5 cut(s) 27, 704, 799, 848, 923
BsgI GTGCAG 2 cut(s) 1200, 1814
Bsh1236I CGCG 1 cut(s) 489
Bsh1285I CGRYCG 2 cut(s) 493, 1927
BshFI GGCC 7 cut(s) 198, 853, 885, 982, 1081, 1446, 1772
BshVI ATCGAT 1 cut(s) 1477
BsiEI CGRYCG 2 cut(s) 493, 1927
BsiSI CCGG 4 cut(s) 225, 542, 1140, 1472
BslFI GGGAC 1 cut(s) 55
BslI CCNNNNNNNGG 3 cut(s) 805, 806, 1442
BsmAI GTCTC 2 cut(s) 225, 1515
BsmBI CGTCTC 2 cut(s) 225, 1515
BsmFI GGGAC 1 cut(s) 55
BsnI GGCC 7 cut(s) 198, 853, 885, 982, 1081, 1446, 1772
Bsp120I GGGCCC 2 cut(s) 851, 883
Bsp1286I GDGCHC 2 cut(s) 855, 887
Bsp1407I TGTACA 1 cut(s) 1533
Bsp19I CCATGG 1 cut(s) 778
BspACI CCGC 4 cut(s) 328, 489, 846, 1197
BspANI GGCC 7 cut(s) 198, 853, 885, 982, 1081, 1446, 1772
BspCNI CTCAG 6 cut(s) 461, 1125, 1480, 1598, 1787, 1975
BspDI ATCGAT 1 cut(s) 1477
BspFNI CGCG 1 cut(s) 489
BspLI GGNNCC 5 cut(s) 88, 98, 853, 885, 1132
BspMI ACCTGC 1 cut(s) 1786
BspPI GGATC 9 cut(s) 318, 564, 824, 1125, 1138, 1167, 1240, 1482, 1499
BsrDI GCAATG 2 cut(s) 26, 54
BsrFI RCCGGY 1 cut(s) 1139
BsrGI TGTACA 1 cut(s) 1533
BsrI ACTGG 5 cut(s) 104, 311, 828, 983, 1901
BssAI RCCGGY 1 cut(s) 1139
BssECI CCNNGG 3 cut(s) 436, 778, 1316
BssNI GRCGYC 2 cut(s) 234, 389
BssT1I CCWWGG 1 cut(s) 778
Bst2UI CCWGG 6 cut(s) 1221, 1317, 1347, 1395, 1669, 1743
Bst4CI ACNGT 5 cut(s) 86, 428, 653, 1342, 1621
Bst6I CTCTTC 1 cut(s) 106
BstACI GRCGYC 2 cut(s) 234, 389
BstAPI GCANNNNNTGC 1 cut(s) 53
BstAUI TGTACA 1 cut(s) 1533
BstBAI YACGTR 1 cut(s) 147
BstC8I GCNNGC 2 cut(s) 54, 1192
BstDEI CTNAG 7 cut(s) 119, 448, 1112, 1488, 1585, 1774, 1962
BstDSI CCRYGG 1 cut(s) 778
BstF5I GGATG 3 cut(s) 543, 739, 1467
BstFNI CGCG 1 cut(s) 489
BstH2I RGCGCY 1 cut(s) 529
BstHHI GCGC 3 cut(s) 489, 528, 1820
BstMAI GTCTC 2 cut(s) 225, 1515
BstMCI CGRYCG 2 cut(s) 493, 1927
BstMWI GCNNNNNNNGC 5 cut(s) 53, 859, 1078, 1196, 1784
BstNI CCWGG 6 cut(s) 1221, 1317, 1347, 1395, 1669, 1743
BstSCI CCNGG 8 cut(s) 223, 1219, 1315, 1345, 1393, 1470, 1667, 1741
BstSFI CTRYAG 2 cut(s) 424, 1324
BstSLI GKGCMC 2 cut(s) 855, 887
BstSNI TACGTA 1 cut(s) 147
BstUI CGCG 1 cut(s) 489
BstV1I GCAGC 3 cut(s) 496, 1201, 1471
BstV2I GAAGAC 1 cut(s) 173
BstX2I RGATCY 3 cut(s) 310, 1130, 1504
BstXI CCANNNNNNTGG 3 cut(s) 923, 1455, 1704
BstYI RGATCY 3 cut(s) 310, 1130, 1504
Bsu15I ATCGAT 1 cut(s) 1477
BsuRI GGCC 7 cut(s) 198, 853, 885, 982, 1081, 1446, 1772
BsuTUI ATCGAT 1 cut(s) 1477
BtgI CCRYGG 1 cut(s) 778
BtsCI GGATG 3 cut(s) 543, 739, 1467
BtsI GCAGTG 1 cut(s) 1754
BtsIMutI CAGTG 3 cut(s) 835, 1754, 1912
BveI ACCTGC 1 cut(s) 1786
Cac8I GCNNGC 2 cut(s) 54, 1192
CaiI CAGNNNCTG 1 cut(s) 1487
CfoI GCGC 3 cut(s) 489, 528, 1820
Cfr10I RCCGGY 1 cut(s) 1139
ClaI ATCGAT 1 cut(s) 1477
DdeI CTNAG 7 cut(s) 119, 448, 1112, 1488, 1585, 1774, 1962
DraI TTTAAA 1 cut(s) 373
DraIII CACNNNGTG 1 cut(s) 830
EaeI YGGCCR 1 cut(s) 1079
Eam1104I CTCTTC 1 cut(s) 106
EarI CTCTTC 1 cut(s) 106
Eco105I TACGTA 1 cut(s) 147
Eco130I CCWWGG 1 cut(s) 778
Eco24I GRGCYC 2 cut(s) 855, 887
Eco47I GGWCC 4 cut(s) 96, 775, 865, 2021
EcoO109I RGGNCCY 4 cut(s) 96, 852, 865, 2021
EcoRI GAATTC 1 cut(s) 1881
EcoRII CCWGG 6 cut(s) 1219, 1315, 1345, 1393, 1667, 1741
EcoT14I CCWWGG 1 cut(s) 778
EcoT38I GRGCYC 2 cut(s) 855, 887
ErhI CCWWGG 1 cut(s) 778
Esp3I CGTCTC 2 cut(s) 225, 1515
FalI AAGNNNNNCTT 4 cut(s) 675, 707, 1183, 1215
FaqI GGGAC 1 cut(s) 55
FauI CCCGC 1 cut(s) 321
FbaI TGATCA 1 cut(s) 1120
FblI GTMKAC 1 cut(s) 1915
Fnu4HI GCNGC 3 cut(s) 485, 1215, 1485
FokI GGATG 3 cut(s) 550, 746, 1454
FriOI GRGCYC 2 cut(s) 855, 887
Fsp4HI GCNGC 3 cut(s) 485, 1215, 1485
FspBI CTAG 2 cut(s) 132, 1151
GlaI GCGC 3 cut(s) 488, 527, 1819
GluI GCNGC 3 cut(s) 485, 1215, 1485
GsaI CCCAGC 5 cut(s) 31, 708, 803, 852, 927
HaeII RGCGCY 1 cut(s) 529
HaeIII GGCC 7 cut(s) 198, 853, 885, 982, 1081, 1446, 1772
HapII CCGG 4 cut(s) 225, 542, 1140, 1472
HhaI GCGC 3 cut(s) 489, 528, 1820
Hin1I GRCGYC 2 cut(s) 234, 389
Hin6I GCGC 3 cut(s) 487, 526, 1818
HinP1I GCGC 3 cut(s) 487, 526, 1818
HincII GTYRAC 2 cut(s) 466, 1807
HindII GTYRAC 2 cut(s) 466, 1807
HindIII AAGCTT 1 cut(s) 578
HinfI GANTC 2 cut(s) 1270, 1738
HpaI GTTAAC 1 cut(s) 1807
HpaII CCGG 4 cut(s) 225, 542, 1140, 1472
HphI GGTGA 2 cut(s) 862, 968
Hpy166II GTNNAC 6 cut(s) 349, 466, 574, 1536, 1807, 1916
Hpy188I TCNGA 5 cut(s) 156, 394, 616, 1120, 1588
Hpy8I GTNNAC 6 cut(s) 349, 466, 574, 1536, 1807, 1916
Hpy99I CGWCG 2 cut(s) 391, 1991
HpyAV CCTTC 5 cut(s) 865, 922, 1849, 1931, 2012
HpyCH4III ACNGT 5 cut(s) 86, 428, 653, 1342, 1621
HpyCH4IV ACGT 6 cut(s) 146, 234, 389, 1126, 1497, 1688
HpyCH4V TGCA 9 cut(s) 484, 656, 1072, 1217, 1229, 1337, 1759, 1787, 1795
HpyF10VI GCNNNNNNNGC 5 cut(s) 53, 859, 1078, 1196, 1784
HpyF3I CTNAG 7 cut(s) 119, 448, 1112, 1488, 1585, 1774, 1962
HpySE526I ACGT 6 cut(s) 146, 234, 389, 1126, 1497, 1688
Hsp92I GRCGYC 2 cut(s) 234, 389
HspAI GCGC 3 cut(s) 487, 526, 1818
Ksp22I TGATCA 1 cut(s) 1120
KspAI GTTAAC 1 cut(s) 1807
LmnI GCTCC 5 cut(s) 24, 123, 1012, 1199, 1815
Lsp1109I GCAGC 3 cut(s) 496, 1201, 1471
LweI GCATC 5 cut(s) 147, 252, 528, 1476, 2001
MaeI CTAG 2 cut(s) 132, 1151
MaeII ACGT 6 cut(s) 146, 234, 389, 1126, 1497, 1688
MaeIII GTNAC 3 cut(s) 74, 440, 1663
MboII GAAGA 5 cut(s) 123, 178, 979, 1076, 1645
MfeI CAATTG 2 cut(s) 1529, 1760
MflI RGATCY 3 cut(s) 310, 1130, 1504
MhlI GDGCHC 2 cut(s) 855, 887
MlsI TGGCCA 1 cut(s) 1081
MluNI TGGCCA 1 cut(s) 1081
MlyI GAGTC 1 cut(s) 1264
MmeI TCCRAC 4 cut(s) 229, 764, 916, 1538
Mox20I TGGCCA 1 cut(s) 1081
MroXI GAANNNNTTC 1 cut(s) 687
MscI TGGCCA 1 cut(s) 1081
MseI TTAA 8 cut(s) 9, 189, 372, 695, 1302, 1407, 1725, 1806
Msp20I TGGCCA 1 cut(s) 1081
MspA1I CMGCKG 3 cut(s) 803, 848, 1484
MspI CCGG 4 cut(s) 225, 542, 1140, 1472
MspR9I CCNGG 8 cut(s) 225, 1221, 1317, 1347, 1395, 1472, 1669, 1743
MunI CAATTG 2 cut(s) 1529, 1760
MvaI CCWGG 6 cut(s) 1221, 1317, 1347, 1395, 1669, 1743
MvnI CGCG 1 cut(s) 489
MwoI GCNNNNNNNGC 5 cut(s) 53, 859, 1078, 1196, 1784
NciI CCSGG 2 cut(s) 225, 1472
NcoI CCATGG 1 cut(s) 778
NlaIV GGNNCC 5 cut(s) 88, 98, 853, 885, 1132
NmuCI GTSAC 2 cut(s) 74, 1663
PcsI WCGNNNNNNNCGW 1 cut(s) 519
PdmI GAANNNNTTC 1 cut(s) 687
PfeI GAWTC 1 cut(s) 1738
PflMI CCANNNNNTGG 1 cut(s) 1442
PfoI TCCNGGA 3 cut(s) 223, 1470, 1741
PkrI GCNGC 3 cut(s) 486, 1216, 1486
Ple19I CGATCG 1 cut(s) 1927
PleI GAGTC 1 cut(s) 1264
PpsI GAGTC 1 cut(s) 1264
Ppu21I YACGTR 1 cut(s) 147
PpuMI RGGWCCY 3 cut(s) 96, 865, 2021
PshBI ATTAAT 1 cut(s) 1407
PsiI TTATAA 1 cut(s) 1385
Psp5II RGGWCCY 3 cut(s) 96, 865, 2021
Psp6I CCWGG 6 cut(s) 1219, 1315, 1345, 1393, 1667, 1741
PspFI CCCAGC 5 cut(s) 27, 704, 799, 848, 923
PspGI CCWGG 6 cut(s) 1219, 1315, 1345, 1393, 1667, 1741
PspN4I GGNNCC 5 cut(s) 88, 98, 853, 885, 1132
PspOMI GGGCCC 2 cut(s) 851, 883
PspPPI RGGWCCY 3 cut(s) 96, 865, 2021
PsrI GAACNNNNNNTAC 4 cut(s) 1517, 1549, 1886, 1918
PstNI CAGNNNCTG 1 cut(s) 1487
PsuI RGATCY 3 cut(s) 310, 1130, 1504
PvuI CGATCG 1 cut(s) 1927
PvuII CAGCTG 2 cut(s) 803, 1484
SaqAI TTAA 8 cut(s) 9, 189, 372, 695, 1302, 1407, 1725, 1806
SatI GCNGC 3 cut(s) 485, 1215, 1485
SchI GAGTC 1 cut(s) 1264
ScrFI CCNGG 8 cut(s) 225, 1221, 1317, 1347, 1395, 1472, 1669, 1743
SduI GDGCHC 2 cut(s) 855, 887
SfaNI GCATC 5 cut(s) 147, 252, 528, 1476, 2001
SfcI CTRYAG 2 cut(s) 424, 1324
SinI GGWCC 4 cut(s) 96, 775, 865, 2021
SmlI CTYRAG 3 cut(s) 751, 1272, 2028
SmoI CTYRAG 3 cut(s) 751, 1272, 2028
SnaBI TACGTA 1 cut(s) 147
SpeI ACTAGT 1 cut(s) 1150
SsiI CCGC 4 cut(s) 328, 489, 846, 1197
SspI AATATT 1 cut(s) 1381
SspMI CTAG 2 cut(s) 132, 1151
StyD4I CCNGG 8 cut(s) 223, 1219, 1315, 1345, 1393, 1470, 1667, 1741
StyI CCWWGG 1 cut(s) 778
TaaI ACNGT 5 cut(s) 86, 428, 653, 1342, 1621
TaiI ACGT 6 cut(s) 149, 237, 392, 1129, 1500, 1691
TaqI TCGA 7 cut(s) 164, 522, 949, 1312, 1477, 1714, 1986
TatI WGTACW 3 cut(s) 249, 1533, 1893
TfiI GAWTC 1 cut(s) 1738
Tru1I TTAA 8 cut(s) 9, 189, 372, 695, 1302, 1407, 1725, 1806
Tru9I TTAA 8 cut(s) 9, 189, 372, 695, 1302, 1407, 1725, 1806
TscAI CASTG 3 cut(s) 835, 1761, 1912
TseFI GTSAC 2 cut(s) 74, 1663
TseI GCWGC 3 cut(s) 484, 1214, 1484
Tsp45I GTSAC 2 cut(s) 74, 1663
TspDTI ATGAA 4 cut(s) 1035, 1538, 1707, 1874
TspGWI ACGGA 4 cut(s) 79, 830, 1123, 1497
TspRI CASTG 3 cut(s) 835, 1761, 1912
Van91I CCANNNNNTGG 1 cut(s) 1442
VpaK11BI GGWCC 4 cut(s) 96, 775, 865, 2021
VspI ATTAAT 1 cut(s) 1407
XapI RAATTY 3 cut(s) 593, 1710, 1881
XbaI TCTAGA 1 cut(s) 131
XmiI GTMKAC 1 cut(s) 1915
XmnI GAANNNNTTC 1 cut(s) 687
XspI CTAG 2 cut(s) 132, 1151
ZraI GACGTC 2 cut(s) 235, 390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.