Rhamnogalacturonate lyase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 384 |
| AccB1I | GGYRCC | 1 cut(s) | 596 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 961, 1601 |
| AccBSI | CCGCTC | 1 cut(s) | 1163 |
| AccI | GTMKAC | 1 cut(s) | 1303 |
| AccII | CGCG | 1 cut(s) | 645 |
| AciI | CCGC | 7 cut(s) | 11, 268, 375, 645, 1002, 1161, 1934 |
| AclI | AACGTT | 1 cut(s) | 1741 |
| AclWI | GGATC | 6 cut(s) | 21, 152, 1297, 1399, 1658, 1671 |
| AcoI | YGGCCR | 2 cut(s) | 695, 1238 |
| AcsI | RAATTY | 5 cut(s) | 555, 749, 992, 1872, 2043 |
| AcuI | CTGAAG | 5 cut(s) | 624, 858, 1260, 1932, 2050 |
| AcyI | GRCGYC | 1 cut(s) | 381 |
| AdeI | CACNNNGTG | 1 cut(s) | 986 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 236, 961, 1601, 2150 |
| AgeI | ACCGGT | 1 cut(s) | 1184 |
| AgsI | TTSAA | 8 cut(s) | 244, 422, 554, 616, 689, 740, 1105, 1223 |
| AjnI | CCWGG | 9 cut(s) | 84, 235, 776, 1378, 1474, 1504, 1552, 1829, 1865 |
| AluBI | AGCT | 8 cut(s) | 24, 736, 1091, 1338, 1373, 1436, 1753, 1940 |
| AluI | AGCT | 8 cut(s) | 24, 736, 1091, 1338, 1373, 1436, 1753, 1940 |
| Alw21I | GWGCWC | 1 cut(s) | 2143 |
| Alw26I | GTCTC | 1 cut(s) | 372 |
| AlwI | GGATC | 6 cut(s) | 21, 152, 1297, 1399, 1658, 1671 |
| Ama87I | CYCGRG | 1 cut(s) | 1431 |
| AoxI | GGCC | 6 cut(s) | 343, 695, 870, 1021, 1136, 1238 |
| ApeKI | GCWGC | 5 cut(s) | 59, 589, 1373, 1643, 1937 |
| ApoI | RAATTY | 5 cut(s) | 555, 749, 992, 1872, 2043 |
| AsiGI | ACCGGT | 1 cut(s) | 1184 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 843 |
| AspA2I | CCTAGG | 1 cut(s) | 320 |
| AspLEI | GCGC | 1 cut(s) | 1987 |
| AspS9I | GGNCC | 6 cut(s) | 931, 1007, 1021, 1040, 1136, 2183 |
| AsuC2I | CCSGG | 2 cut(s) | 372, 477 |
| AsuHPI | GGTGA | 3 cut(s) | 104, 1124, 1913 |
| AvaI | CYCGRG | 1 cut(s) | 1431 |
| AvaII | GGWCC | 4 cut(s) | 931, 1007, 1040, 2183 |
| AvrII | CCTAGG | 1 cut(s) | 320 |
| BaeGI | GKGCMC | 1 cut(s) | 601 |
| BalI | TGGCCA | 1 cut(s) | 1240 |
| BamHI | GGATCC | 1 cut(s) | 1663 |
| BanI | GGYRCC | 1 cut(s) | 596 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2048, 2080 |
| BbsI | GAAGAC | 3 cut(s) | 116, 128, 549 |
| Bbv12I | GWGCWC | 1 cut(s) | 2143 |
| BbvI | GCAGC | 5 cut(s) | 71, 601, 1360, 1630, 1949 |
| BccI | CCATC | 2 cut(s) | 933, 1230 |
| BceAI | ACGGC | 1 cut(s) | 827 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1622, 1656 |
| BciT130I | CCWGG | 9 cut(s) | 86, 237, 778, 1380, 1476, 1506, 1554, 1831, 1867 |
| BciVI | GTATCC | 2 cut(s) | 1409, 1637 |
| BclI | TGATCA | 2 cut(s) | 712, 975 |
| BcnI | CCSGG | 2 cut(s) | 372, 477 |
| BcoDI | GTCTC | 1 cut(s) | 372 |
| BfaI | CTAG | 6 cut(s) | 162, 201, 222, 321, 522, 2177 |
| BfmI | CTRYAG | 2 cut(s) | 948, 1483 |
| BfuI | GTATCC | 2 cut(s) | 1409, 1637 |
| BglII | AGATCT | 1 cut(s) | 518 |
| BisI | GCNGC | 6 cut(s) | 60, 590, 1374, 1644, 1935, 1938 |
| BlnI | CCTAGG | 1 cut(s) | 320 |
| BlsI | GCNGC | 6 cut(s) | 61, 591, 1375, 1645, 1936, 1939 |
| BmcAI | AGTACT | 2 cut(s) | 905, 1069 |
| Bme18I | GGWCC | 4 cut(s) | 931, 1007, 1040, 2183 |
| BmeT110I | CYCGRG | 1 cut(s) | 1431 |
| BmgT120I | GGNCC | 6 cut(s) | 931, 1007, 1021, 1040, 1136, 2183 |
| BmiI | GGNNCC | 6 cut(s) | 598, 1009, 1503, 1665, 1861, 2104 |
| BmrI | ACTGGG | 2 cut(s) | 463, 978 |
| BmsI | GCATC | 2 cut(s) | 1192, 1518 |
| BmuI | ACTGGG | 2 cut(s) | 463, 978 |
| BpiI | GAAGAC | 3 cut(s) | 116, 128, 549 |
| BpmI | CTGGAG | 1 cut(s) | 1401 |
| BpuEI | CTTGAG | 1 cut(s) | 46 |
| BpuMI | CCSGG | 2 cut(s) | 372, 477 |
| Bsa29I | ATCGAT | 1 cut(s) | 1292 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1668 |
| BsaHI | GRCGYC | 1 cut(s) | 381 |
| BsaJI | CCNNGG | 3 cut(s) | 236, 320, 934 |
| BsaWI | WCCGGW | 2 cut(s) | 1184, 1660 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 369, 399 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 236, 961, 1601, 2150 |
| Bse118I | RCCGGY | 1 cut(s) | 1184 |
| Bse1I | ACTGG | 3 cut(s) | 458, 901, 984 |
| Bse3DI | GCAATG | 2 cut(s) | 69, 216 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1668 |
| BseBI | CCWGG | 9 cut(s) | 86, 237, 778, 1380, 1476, 1506, 1554, 1831, 1867 |
| BseCI | ATCGAT | 1 cut(s) | 1292 |
| BseDI | CCNNGG | 3 cut(s) | 236, 320, 934 |
| BseGI | GGATG | 5 cut(s) | 348, 463, 944, 978, 1028 |
| BseJI | GATNNNNATC | 1 cut(s) | 1668 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 236, 961, 1601, 2150 |
| BseMI | GCAATG | 2 cut(s) | 69, 216 |
| BseMII | CTCAG | 2 cut(s) | 1638, 2138 |
| BseNI | ACTGG | 3 cut(s) | 458, 901, 984 |
| BseRI | GAGGAG | 1 cut(s) | 2166 |
| BseSI | GKGCMC | 1 cut(s) | 601 |
| BseXI | GCAGC | 5 cut(s) | 71, 601, 1360, 1630, 1949 |
| BseYI | CCCAGC | 3 cut(s) | 585, 1079, 1091 |
| BsgI | GTGCAG | 1 cut(s) | 1359 |
| Bsh1236I | CGCG | 1 cut(s) | 645 |
| Bsh1285I | CGRYCG | 3 cut(s) | 649, 808, 1636 |
| BshFI | GGCC | 6 cut(s) | 345, 697, 872, 1023, 1138, 1240 |
| BshNI | GGYRCC | 1 cut(s) | 596 |
| BshTI | ACCGGT | 1 cut(s) | 1184 |
| BshVI | ATCGAT | 1 cut(s) | 1292 |
| BsiEI | CGRYCG | 3 cut(s) | 649, 808, 1636 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2143 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1431 |
| BsiSI | CCGG | 6 cut(s) | 208, 372, 476, 698, 1185, 1661 |
| BslFI | GGGAC | 3 cut(s) | 64, 354, 2033 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 236, 961, 1601, 2150 |
| BsmAI | GTCTC | 1 cut(s) | 372 |
| BsmBI | CGTCTC | 1 cut(s) | 372 |
| BsmFI | GGGAC | 3 cut(s) | 64, 354, 2033 |
| BsnI | GGCC | 6 cut(s) | 345, 697, 872, 1023, 1138, 1240 |
| BsoBI | CYCGRG | 1 cut(s) | 1431 |
| Bsp1286I | GDGCHC | 2 cut(s) | 601, 2143 |
| Bsp1407I | TGTACA | 1 cut(s) | 1692 |
| Bsp19I | CCATGG | 1 cut(s) | 934 |
| BspACI | CCGC | 7 cut(s) | 11, 268, 375, 645, 1002, 1161, 1934 |
| BspANI | GGCC | 6 cut(s) | 345, 697, 872, 1023, 1138, 1240 |
| BspCNI | CTCAG | 2 cut(s) | 1639, 2137 |
| BspDI | ATCGAT | 1 cut(s) | 1292 |
| BspFNI | CGCG | 1 cut(s) | 645 |
| BspHI | TCATGA | 1 cut(s) | 1680 |
| BspLI | GGNNCC | 6 cut(s) | 598, 1009, 1503, 1665, 1861, 2104 |
| BspPI | GGATC | 6 cut(s) | 21, 152, 1297, 1399, 1658, 1671 |
| BspQI | GCTCTTC | 2 cut(s) | 1743, 2069 |
| BspT107I | GGYRCC | 1 cut(s) | 596 |
| BsrBI | CCGCTC | 1 cut(s) | 1163 |
| BsrDI | GCAATG | 2 cut(s) | 69, 216 |
| BsrFI | RCCGGY | 1 cut(s) | 1184 |
| BsrGI | TGTACA | 1 cut(s) | 1692 |
| BsrI | ACTGG | 3 cut(s) | 458, 901, 984 |
| BssAI | RCCGGY | 1 cut(s) | 1184 |
| BssECI | CCNNGG | 3 cut(s) | 236, 320, 934 |
| BssNI | GRCGYC | 1 cut(s) | 381 |
| BssT1I | CCWWGG | 2 cut(s) | 320, 934 |
| Bst2UI | CCWGG | 9 cut(s) | 86, 237, 778, 1380, 1476, 1506, 1554, 1831, 1867 |
| Bst4CI | ACNGT | 1 cut(s) | 809 |
| Bst6I | CTCTTC | 2 cut(s) | 1743, 2069 |
| BstACI | GRCGYC | 1 cut(s) | 381 |
| BstAUI | TGTACA | 1 cut(s) | 1692 |
| BstC8I | GCNNGC | 1 cut(s) | 1089 |
| BstDEI | CTNAG | 3 cut(s) | 1307, 1647, 2124 |
| BstDSI | CCRYGG | 1 cut(s) | 934 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2148 |
| BstF5I | GGATG | 5 cut(s) | 348, 463, 944, 978, 1028 |
| BstFNI | CGCG | 1 cut(s) | 645 |
| BstHHI | GCGC | 1 cut(s) | 1987 |
| BstMAI | GTCTC | 1 cut(s) | 372 |
| BstMCI | CGRYCG | 3 cut(s) | 649, 808, 1636 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 331, 1934 |
| BstNI | CCWGG | 9 cut(s) | 86, 237, 778, 1380, 1476, 1506, 1554, 1831, 1867 |
| BstNSI | RCATGY | 1 cut(s) | 2201 |
| BstSFI | CTRYAG | 2 cut(s) | 948, 1483 |
| BstSLI | GKGCMC | 1 cut(s) | 601 |
| BstUI | CGCG | 1 cut(s) | 645 |
| BstV1I | GCAGC | 5 cut(s) | 71, 601, 1360, 1630, 1949 |
| BstV2I | GAAGAC | 3 cut(s) | 116, 128, 549 |
| BstX2I | RGATCY | 3 cut(s) | 157, 518, 1663 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 593 |
| BstYI | RGATCY | 3 cut(s) | 157, 518, 1663 |
| Bsu15I | ATCGAT | 1 cut(s) | 1292 |
| BsuI | GTATCC | 2 cut(s) | 1409, 1637 |
| BsuRI | GGCC | 6 cut(s) | 345, 697, 872, 1023, 1138, 1240 |
| BsuTUI | ATCGAT | 1 cut(s) | 1292 |
| BtgI | CCRYGG | 1 cut(s) | 934 |
| BtsCI | GGATG | 5 cut(s) | 348, 463, 944, 978, 1028 |
| BtsIMutI | CAGTG | 2 cut(s) | 991, 2074 |
| Cac8I | GCNNGC | 1 cut(s) | 1089 |
| CciI | TCATGA | 1 cut(s) | 1680 |
| CfoI | GCGC | 1 cut(s) | 1987 |
| Cfr10I | RCCGGY | 1 cut(s) | 1184 |
| Cfr13I | GGNCC | 6 cut(s) | 931, 1007, 1021, 1040, 1136, 2183 |
| ClaI | ATCGAT | 1 cut(s) | 1292 |
| CseI | GACGC | 1 cut(s) | 651 |
| CspAI | ACCGGT | 1 cut(s) | 1184 |
| DdeI | CTNAG | 3 cut(s) | 1307, 1647, 2124 |
| DraI | TTTAAA | 2 cut(s) | 877, 1882 |
| DraIII | CACNNNGTG | 1 cut(s) | 986 |
| EaeI | YGGCCR | 2 cut(s) | 695, 1238 |
| Eam1104I | CTCTTC | 2 cut(s) | 1743, 2069 |
| EarI | CTCTTC | 2 cut(s) | 1743, 2069 |
| EciI | GGCGGA | 3 cut(s) | 26, 283, 390 |
| Eco130I | CCWWGG | 2 cut(s) | 320, 934 |
| Eco147I | AGGCCT | 1 cut(s) | 872 |
| Eco47I | GGWCC | 4 cut(s) | 931, 1007, 1040, 2183 |
| Eco57I | CTGAAG | 5 cut(s) | 624, 858, 1260, 1932, 2050 |
| Eco88I | CYCGRG | 1 cut(s) | 1431 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2148 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1021, 2183 |
| EcoRI | GAATTC | 1 cut(s) | 2043 |
| EcoRII | CCWGG | 9 cut(s) | 84, 235, 776, 1378, 1474, 1504, 1552, 1829, 1865 |
| EcoT14I | CCWWGG | 2 cut(s) | 320, 934 |
| ErhI | CCWWGG | 2 cut(s) | 320, 934 |
| Esp3I | CGTCTC | 1 cut(s) | 372 |
| FaqI | GGGAC | 3 cut(s) | 64, 354, 2033 |
| FbaI | TGATCA | 2 cut(s) | 712, 975 |
| FblI | GTMKAC | 1 cut(s) | 1303 |
| Fnu4HI | GCNGC | 6 cut(s) | 60, 590, 1374, 1644, 1935, 1938 |
| FokI | GGATG | 5 cut(s) | 335, 470, 951, 985, 1015 |
| Fsp4HI | GCNGC | 6 cut(s) | 60, 590, 1374, 1644, 1935, 1938 |
| FspBI | CTAG | 6 cut(s) | 162, 201, 222, 321, 522, 2177 |
| GlaI | GCGC | 1 cut(s) | 1986 |
| GluI | GCNGC | 6 cut(s) | 60, 590, 1374, 1644, 1935, 1938 |
| GsaI | CCCAGC | 3 cut(s) | 589, 1083, 1095 |
| GsuI | CTGGAG | 1 cut(s) | 1401 |
| HaeIII | GGCC | 6 cut(s) | 345, 697, 872, 1023, 1138, 1240 |
| HapII | CCGG | 6 cut(s) | 208, 372, 476, 698, 1185, 1661 |
| HgaI | GACGC | 1 cut(s) | 651 |
| HhaI | GCGC | 1 cut(s) | 1987 |
| Hin1I | GRCGYC | 1 cut(s) | 381 |
| Hin6I | GCGC | 1 cut(s) | 1985 |
| HinP1I | GCGC | 1 cut(s) | 1985 |
| HincII | GTYRAC | 1 cut(s) | 1304 |
| HindII | GTYRAC | 1 cut(s) | 1304 |
| HindIII | AAGCTT | 1 cut(s) | 734 |
| HinfI | GANTC | 5 cut(s) | 316, 966, 1429, 2112, 2154 |
| HpaII | CCGG | 6 cut(s) | 208, 372, 476, 698, 1185, 1661 |
| HphI | GGTGA | 3 cut(s) | 104, 1124, 1913 |
| Hpy166II | GTNNAC | 4 cut(s) | 730, 812, 1190, 1304 |
| Hpy188III | TCNNGA | 9 cut(s) | 466, 522, 836, 970, 1054, 1195, 1426, 1681, 2130 |
| Hpy8I | GTNNAC | 4 cut(s) | 730, 812, 1190, 1304 |
| Hpy99I | CGWCG | 4 cut(s) | 21, 386, 645, 2005 |
| HpyAV | CCTTC | 8 cut(s) | 683, 1201, 1277, 1281, 1898, 2093, 2174, 2196 |
| HpyCH4III | ACNGT | 1 cut(s) | 809 |
| HpyCH4IV | ACGT | 2 cut(s) | 381, 1741 |
| HpyCH4V | TGCA | 3 cut(s) | 1358, 1376, 2201 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 331, 1934 |
| HpyF3I | CTNAG | 3 cut(s) | 1307, 1647, 2124 |
| HpySE526I | ACGT | 2 cut(s) | 381, 1741 |
| Hsp92I | GRCGYC | 1 cut(s) | 381 |
| HspAI | GCGC | 1 cut(s) | 1985 |
| Ksp22I | TGATCA | 2 cut(s) | 712, 975 |
| LguI | GCTCTTC | 2 cut(s) | 1743, 2069 |
| LmnI | GCTCC | 4 cut(s) | 21, 1168, 1210, 2138 |
| Lsp1109I | GCAGC | 5 cut(s) | 71, 601, 1360, 1630, 1949 |
| LweI | GCATC | 2 cut(s) | 1192, 1518 |
| MaeI | CTAG | 6 cut(s) | 162, 201, 222, 321, 522, 2177 |
| MaeII | ACGT | 2 cut(s) | 381, 1741 |
| MaeIII | GTNAC | 4 cut(s) | 250, 277, 301, 1825 |
| MbiI | CCGCTC | 1 cut(s) | 1163 |
| MboII | GAAGA | 9 cut(s) | 121, 133, 554, 718, 1235, 1266, 1760, 1938, 2056 |
| MflI | RGATCY | 3 cut(s) | 157, 518, 1663 |
| MhlI | GDGCHC | 2 cut(s) | 601, 2143 |
| MlsI | TGGCCA | 1 cut(s) | 1240 |
| MluNI | TGGCCA | 1 cut(s) | 1240 |
| MlyI | GAGTC | 3 cut(s) | 310, 1423, 2163 |
| MmeI | TCCRAC | 5 cut(s) | 367, 376, 1067, 1495, 1697 |
| Mox20I | TGGCCA | 1 cut(s) | 1240 |
| MroXI | GAANNNNTTC | 1 cut(s) | 843 |
| MscI | TGGCCA | 1 cut(s) | 1240 |
| Msp20I | TGGCCA | 1 cut(s) | 1240 |
| MspA1I | CMGCKG | 1 cut(s) | 1004 |
| MspI | CCGG | 6 cut(s) | 208, 372, 476, 698, 1185, 1661 |
| MvaI | CCWGG | 9 cut(s) | 86, 237, 778, 1380, 1476, 1506, 1554, 1831, 1867 |
| MvnI | CGCG | 1 cut(s) | 645 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 331, 1934 |
| NciI | CCSGG | 2 cut(s) | 372, 477 |
| NcoI | CCATGG | 1 cut(s) | 934 |
| NlaIV | GGNNCC | 6 cut(s) | 598, 1009, 1503, 1665, 1861, 2104 |
| NmuCI | GTSAC | 1 cut(s) | 301 |
| NspI | RCATGY | 1 cut(s) | 2201 |
| PaeR7I | CTCGAG | 1 cut(s) | 1431 |
| PagI | TCATGA | 1 cut(s) | 1680 |
| PceI | AGGCCT | 1 cut(s) | 872 |
| PciSI | GCTCTTC | 2 cut(s) | 1743, 2069 |
| PdmI | GAANNNNTTC | 1 cut(s) | 843 |
| PfeI | GAWTC | 2 cut(s) | 966, 2112 |
| PflFI | GACNNNGTC | 1 cut(s) | 645 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 961, 1601 |
| PinAI | ACCGGT | 1 cut(s) | 1184 |
| PkrI | GCNGC | 6 cut(s) | 61, 591, 1375, 1645, 1936, 1939 |
| Ple19I | CGATCG | 1 cut(s) | 1636 |
| PleI | GAGTC | 3 cut(s) | 310, 1423, 2162 |
| PpsI | GAGTC | 3 cut(s) | 310, 1423, 2162 |
| PpuMI | RGGWCCY | 1 cut(s) | 2183 |
| Psp1406I | AACGTT | 1 cut(s) | 1741 |
| Psp5II | RGGWCCY | 1 cut(s) | 2183 |
| Psp6I | CCWGG | 9 cut(s) | 84, 235, 776, 1378, 1474, 1504, 1552, 1829, 1865 |
| PspFI | CCCAGC | 3 cut(s) | 585, 1079, 1091 |
| PspGI | CCWGG | 9 cut(s) | 84, 235, 776, 1378, 1474, 1504, 1552, 1829, 1865 |
| PspN4I | GGNNCC | 6 cut(s) | 598, 1009, 1503, 1665, 1861, 2104 |
| PspPI | GGNCC | 6 cut(s) | 931, 1007, 1021, 1040, 1136, 2183 |
| PspPPI | RGGWCCY | 1 cut(s) | 2183 |
| PspXI | VCTCGAGB | 1 cut(s) | 1431 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1676, 1708 |
| PsuI | RGATCY | 3 cut(s) | 157, 518, 1663 |
| PsyI | GACNNNGTC | 1 cut(s) | 645 |
| PvuI | CGATCG | 1 cut(s) | 1636 |
| SalI | GTCGAC | 1 cut(s) | 1302 |
| SapI | GCTCTTC | 2 cut(s) | 1743, 2069 |
| SatI | GCNGC | 6 cut(s) | 60, 590, 1374, 1644, 1935, 1938 |
| Sau96I | GGNCC | 6 cut(s) | 931, 1007, 1021, 1040, 1136, 2183 |
| ScaI | AGTACT | 2 cut(s) | 905, 1069 |
| SchI | GAGTC | 3 cut(s) | 310, 1423, 2163 |
| SduI | GDGCHC | 2 cut(s) | 601, 2143 |
| SfaNI | GCATC | 2 cut(s) | 1192, 1518 |
| SfcI | CTRYAG | 2 cut(s) | 948, 1483 |
| Sfr274I | CTCGAG | 1 cut(s) | 1431 |
| SinI | GGWCC | 4 cut(s) | 931, 1007, 1040, 2183 |
| SlaI | CTCGAG | 1 cut(s) | 1431 |
| SmlI | CTYRAG | 2 cut(s) | 25, 1431 |
| SmoI | CTYRAG | 2 cut(s) | 25, 1431 |
| SseBI | AGGCCT | 1 cut(s) | 872 |
| SsiI | CCGC | 7 cut(s) | 11, 268, 375, 645, 1002, 1161, 1934 |
| SspI | AATATT | 2 cut(s) | 1540, 1837 |
| SspMI | CTAG | 6 cut(s) | 162, 201, 222, 321, 522, 2177 |
| StuI | AGGCCT | 1 cut(s) | 872 |
| StyI | CCWWGG | 2 cut(s) | 320, 934 |
| TaaI | ACNGT | 1 cut(s) | 809 |
| TaiI | ACGT | 2 cut(s) | 384, 1744 |
| TatI | WGTACW | 4 cut(s) | 903, 1067, 1312, 1692 |
| TauI | GCSGC | 1 cut(s) | 1937 |
| TfiI | GAWTC | 2 cut(s) | 966, 2112 |
| TscAI | CASTG | 2 cut(s) | 991, 2074 |
| TseFI | GTSAC | 1 cut(s) | 301 |
| TseI | GCWGC | 5 cut(s) | 59, 589, 1373, 1643, 1937 |
| Tsp45I | GTSAC | 1 cut(s) | 301 |
| TspDTI | ATGAA | 9 cut(s) | 197, 778, 1005, 1028, 1343, 1697, 1761, 2036, 2112 |
| TspGWI | ACGGA | 2 cut(s) | 554, 1743 |
| TspRI | CASTG | 2 cut(s) | 991, 2074 |
| Tth111I | GACNNNGTC | 1 cut(s) | 645 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 961, 1601 |
| VpaK11BI | GGWCC | 4 cut(s) | 931, 1007, 1040, 2183 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2148 |
| XapI | RAATTY | 5 cut(s) | 555, 749, 992, 1872, 2043 |
| XbaI | TCTAGA | 1 cut(s) | 521 |
| XceI | RCATGY | 1 cut(s) | 2201 |
| XhoI | CTCGAG | 1 cut(s) | 1431 |
| XmaJI | CCTAGG | 1 cut(s) | 320 |
| XmiI | GTMKAC | 1 cut(s) | 1303 |
| XmnI | GAANNNNTTC | 1 cut(s) | 843 |
| XspI | CTAG | 6 cut(s) | 162, 201, 222, 321, 522, 2177 |
| ZraI | GACGTC | 1 cut(s) | 382 |
| ZrmI | AGTACT | 2 cut(s) | 905, 1069 |