Rhamnogalacturonate lyase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 46 |
| Acc36I | ACCTGC | 1 cut(s) | 46 |
| AccB1I | GGYRCC | 1 cut(s) | 824 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1189, 1829 |
| AccBSI | CCGCTC | 3 cut(s) | 27, 1319, 1391 |
| AccI | GTMKAC | 1 cut(s) | 1531 |
| AccII | CGCG | 1 cut(s) | 873 |
| AclI | AACGTT | 1 cut(s) | 1969 |
| AclWI | GGATC | 7 cut(s) | 249, 380, 1525, 1614, 1627, 1886, 1899 |
| AcoI | YGGCCR | 2 cut(s) | 923, 1466 |
| AcsI | RAATTY | 5 cut(s) | 783, 977, 1220, 2100, 2271 |
| AcuI | CTGAAG | 4 cut(s) | 1086, 1488, 2160, 2278 |
| AcyI | GRCGYC | 2 cut(s) | 150, 2162 |
| AdeI | CACNNNGTG | 1 cut(s) | 1214 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 464, 1189, 1573, 1829, 2378 |
| AgsI | TTSAA | 8 cut(s) | 472, 650, 782, 844, 917, 968, 1333, 1451 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1641, 1673 |
| Alw21I | GWGCWC | 1 cut(s) | 2371 |
| Alw26I | GTCTC | 2 cut(s) | 329, 595 |
| AlwI | GGATC | 7 cut(s) | 249, 380, 1525, 1614, 1627, 1886, 1899 |
| AoxI | GGCC | 5 cut(s) | 923, 1098, 1249, 1364, 1466 |
| ApeKI | GCWGC | 3 cut(s) | 287, 817, 1601 |
| ApoI | RAATTY | 5 cut(s) | 783, 977, 1220, 2100, 2271 |
| AseI | ATTAAT | 2 cut(s) | 2019, 2301 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1071 |
| AspLEI | GCGC | 1 cut(s) | 2215 |
| AspS9I | GGNCC | 8 cut(s) | 1159, 1235, 1249, 1268, 1364, 1729, 1832, 2411 |
| AsuC2I | CCSGG | 1 cut(s) | 705 |
| AsuHPI | GGTGA | 5 cut(s) | 14, 165, 332, 523, 1352 |
| AvaII | GGWCC | 6 cut(s) | 1159, 1235, 1268, 1729, 1832, 2411 |
| BaeGI | GKGCMC | 1 cut(s) | 829 |
| BalI | TGGCCA | 1 cut(s) | 1468 |
| BamHI | GGATCC | 2 cut(s) | 1619, 1891 |
| BanI | GGYRCC | 1 cut(s) | 824 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2276, 2308 |
| BbsI | GAAGAC | 2 cut(s) | 356, 777 |
| Bbv12I | GWGCWC | 1 cut(s) | 2371 |
| BbvI | GCAGC | 3 cut(s) | 299, 829, 1588 |
| BccI | CCATC | 5 cut(s) | 141, 1161, 1247, 1418, 1458 |
| BceAI | ACGGC | 2 cut(s) | 98, 1055 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1850, 1884 |
| BciVI | GTATCC | 2 cut(s) | 1637, 1865 |
| BclI | TGATCA | 2 cut(s) | 940, 1203 |
| BcnI | CCSGG | 1 cut(s) | 705 |
| BcoDI | GTCTC | 2 cut(s) | 329, 595 |
| BfaI | CTAG | 7 cut(s) | 390, 429, 450, 549, 750, 1005, 2405 |
| BfmI | CTRYAG | 2 cut(s) | 1176, 1711 |
| BfuAI | ACCTGC | 1 cut(s) | 46 |
| BfuI | GTATCC | 2 cut(s) | 1637, 1865 |
| BglII | AGATCT | 1 cut(s) | 746 |
| BisI | GCNGC | 4 cut(s) | 288, 818, 1602, 1872 |
| BlpI | GCTNAGC | 1 cut(s) | 51 |
| BlsI | GCNGC | 4 cut(s) | 289, 819, 1603, 1873 |
| BmcAI | AGTACT | 2 cut(s) | 1133, 1297 |
| Bme18I | GGWCC | 6 cut(s) | 1159, 1235, 1268, 1729, 1832, 2411 |
| BmgT120I | GGNCC | 8 cut(s) | 1159, 1235, 1249, 1268, 1364, 1729, 1832, 2411 |
| BmiI | GGNNCC | 7 cut(s) | 826, 1237, 1621, 1730, 1731, 1893, 2089 |
| BmrI | ACTGGG | 2 cut(s) | 691, 1206 |
| BmsI | GCATC | 1 cut(s) | 1420 |
| BmuI | ACTGGG | 2 cut(s) | 691, 1206 |
| BpiI | GAAGAC | 2 cut(s) | 356, 777 |
| BpmI | CTGGAG | 1 cut(s) | 1629 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 51 |
| BpuEI | CTTGAG | 1 cut(s) | 235 |
| BpuMI | CCSGG | 1 cut(s) | 705 |
| Bsa29I | ATCGAT | 1 cut(s) | 1520 |
| BsaAI | YACGTR | 2 cut(s) | 86, 209 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1896 |
| BsaHI | GRCGYC | 2 cut(s) | 150, 2162 |
| BsaJI | CCNNGG | 5 cut(s) | 403, 464, 1162, 1703, 1732 |
| BsaWI | WCCGGW | 3 cut(s) | 191, 1888, 2202 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 52, 82, 597, 627 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 464, 1189, 1573, 1829, 2378 |
| Bse1I | ACTGG | 3 cut(s) | 686, 1129, 1212 |
| Bse3DI | GCAATG | 2 cut(s) | 297, 444 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1896 |
| BseCI | ATCGAT | 1 cut(s) | 1520 |
| BseDI | CCNNGG | 5 cut(s) | 403, 464, 1162, 1703, 1732 |
| BseGI | GGATG | 5 cut(s) | 576, 691, 1172, 1206, 1256 |
| BseJI | GATNNNNATC | 1 cut(s) | 1896 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 464, 1189, 1573, 1829, 2378 |
| BseMI | GCAATG | 2 cut(s) | 297, 444 |
| BseMII | CTCAG | 3 cut(s) | 42, 1866, 2366 |
| BseNI | ACTGG | 3 cut(s) | 686, 1129, 1212 |
| BseRI | GAGGAG | 1 cut(s) | 2394 |
| BseSI | GKGCMC | 1 cut(s) | 829 |
| BseXI | GCAGC | 3 cut(s) | 299, 829, 1588 |
| BseYI | CCCAGC | 3 cut(s) | 599, 813, 1307 |
| BsgI | GTGCAG | 1 cut(s) | 1587 |
| Bsh1236I | CGCG | 1 cut(s) | 873 |
| Bsh1285I | CGRYCG | 3 cut(s) | 877, 1036, 1864 |
| BshFI | GGCC | 5 cut(s) | 925, 1100, 1251, 1366, 1468 |
| BshNI | GGYRCC | 1 cut(s) | 824 |
| BshVI | ATCGAT | 1 cut(s) | 1520 |
| BsiEI | CGRYCG | 3 cut(s) | 877, 1036, 1864 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2371 |
| BsiSI | CCGG | 6 cut(s) | 192, 436, 704, 926, 1889, 2203 |
| BsiWI | CGTACG | 1 cut(s) | 82 |
| BslFI | GGGAC | 4 cut(s) | 292, 582, 1715, 2261 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 464, 1189, 1573, 1829, 2378 |
| BsmAI | GTCTC | 2 cut(s) | 329, 595 |
| BsmBI | CGTCTC | 1 cut(s) | 329 |
| BsmFI | GGGAC | 4 cut(s) | 292, 582, 1715, 2261 |
| BsnI | GGCC | 5 cut(s) | 925, 1100, 1251, 1366, 1468 |
| Bsp1286I | GDGCHC | 2 cut(s) | 829, 2371 |
| Bsp1407I | TGTACA | 1 cut(s) | 1920 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 51 |
| Bsp19I | CCATGG | 1 cut(s) | 1162 |
| BspANI | GGCC | 5 cut(s) | 925, 1100, 1251, 1366, 1468 |
| BspCNI | CTCAG | 3 cut(s) | 43, 1867, 2365 |
| BspDI | ATCGAT | 1 cut(s) | 1520 |
| BspFNI | CGCG | 1 cut(s) | 873 |
| BspHI | TCATGA | 2 cut(s) | 1908, 2124 |
| BspLI | GGNNCC | 7 cut(s) | 826, 1237, 1621, 1730, 1731, 1893, 2089 |
| BspMI | ACCTGC | 1 cut(s) | 46 |
| BspPI | GGATC | 7 cut(s) | 249, 380, 1525, 1614, 1627, 1886, 1899 |
| BspQI | GCTCTTC | 1 cut(s) | 1971 |
| BspT107I | GGYRCC | 1 cut(s) | 824 |
| BsrBI | CCGCTC | 3 cut(s) | 27, 1319, 1391 |
| BsrDI | GCAATG | 2 cut(s) | 297, 444 |
| BsrGI | TGTACA | 1 cut(s) | 1920 |
| BsrI | ACTGG | 3 cut(s) | 686, 1129, 1212 |
| BssECI | CCNNGG | 5 cut(s) | 403, 464, 1162, 1703, 1732 |
| BssNI | GRCGYC | 2 cut(s) | 150, 2162 |
| BssT1I | CCWWGG | 1 cut(s) | 1162 |
| Bst4CI | ACNGT | 1 cut(s) | 1037 |
| Bst6I | CTCTTC | 1 cut(s) | 1971 |
| BstACI | GRCGYC | 2 cut(s) | 150, 2162 |
| BstAUI | TGTACA | 1 cut(s) | 1920 |
| BstBAI | YACGTR | 2 cut(s) | 86, 209 |
| BstC8I | GCNNGC | 2 cut(s) | 48, 1317 |
| BstDEI | CTNAG | 3 cut(s) | 51, 1875, 2352 |
| BstDSI | CCRYGG | 1 cut(s) | 1162 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2376 |
| BstF5I | GGATG | 5 cut(s) | 576, 691, 1172, 1206, 1256 |
| BstFNI | CGCG | 1 cut(s) | 873 |
| BstHHI | GCGC | 1 cut(s) | 2215 |
| BstMAI | GTCTC | 2 cut(s) | 329, 595 |
| BstMCI | CGRYCG | 3 cut(s) | 877, 1036, 1864 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 47, 52, 559 |
| BstNSI | RCATGY | 1 cut(s) | 2429 |
| BstSFI | CTRYAG | 2 cut(s) | 1176, 1711 |
| BstSLI | GKGCMC | 1 cut(s) | 829 |
| BstSNI | TACGTA | 2 cut(s) | 86, 209 |
| BstUI | CGCG | 1 cut(s) | 873 |
| BstV1I | GCAGC | 3 cut(s) | 299, 829, 1588 |
| BstV2I | GAAGAC | 2 cut(s) | 356, 777 |
| BstX2I | RGATCY | 4 cut(s) | 385, 746, 1619, 1891 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 821 |
| BstYI | RGATCY | 4 cut(s) | 385, 746, 1619, 1891 |
| Bsu15I | ATCGAT | 1 cut(s) | 1520 |
| BsuI | GTATCC | 2 cut(s) | 1637, 1865 |
| BsuRI | GGCC | 5 cut(s) | 925, 1100, 1251, 1366, 1468 |
| BsuTUI | ATCGAT | 1 cut(s) | 1520 |
| BtgI | CCRYGG | 1 cut(s) | 1162 |
| BtsCI | GGATG | 5 cut(s) | 576, 691, 1172, 1206, 1256 |
| BtsIMutI | CAGTG | 1 cut(s) | 1219 |
| BveI | ACCTGC | 1 cut(s) | 46 |
| Cac8I | GCNNGC | 2 cut(s) | 48, 1317 |
| CciI | TCATGA | 2 cut(s) | 1908, 2124 |
| CfoI | GCGC | 1 cut(s) | 2215 |
| Cfr13I | GGNCC | 8 cut(s) | 1159, 1235, 1249, 1268, 1364, 1729, 1832, 2411 |
| ClaI | ATCGAT | 1 cut(s) | 1520 |
| CseI | GACGC | 4 cut(s) | 139, 265, 879, 2151 |
| DdeI | CTNAG | 3 cut(s) | 51, 1875, 2352 |
| DraI | TTTAAA | 2 cut(s) | 1105, 2110 |
| DraIII | CACNNNGTG | 1 cut(s) | 1214 |
| EaeI | YGGCCR | 2 cut(s) | 923, 1466 |
| Eam1104I | CTCTTC | 1 cut(s) | 1971 |
| EarI | CTCTTC | 1 cut(s) | 1971 |
| EciI | GGCGGA | 2 cut(s) | 254, 511 |
| Eco105I | TACGTA | 2 cut(s) | 86, 209 |
| Eco130I | CCWWGG | 1 cut(s) | 1162 |
| Eco147I | AGGCCT | 1 cut(s) | 1100 |
| Eco47I | GGWCC | 6 cut(s) | 1159, 1235, 1268, 1729, 1832, 2411 |
| Eco57I | CTGAAG | 4 cut(s) | 1086, 1488, 2160, 2278 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2376 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1249, 1729, 2411 |
| EcoRI | GAATTC | 1 cut(s) | 2271 |
| EcoT14I | CCWWGG | 1 cut(s) | 1162 |
| ErhI | CCWWGG | 1 cut(s) | 1162 |
| Esp3I | CGTCTC | 1 cut(s) | 329 |
| FaqI | GGGAC | 4 cut(s) | 292, 582, 1715, 2261 |
| FauI | CCCGC | 3 cut(s) | 118, 1312, 1506 |
| FauNDI | CATATG | 1 cut(s) | 1588 |
| FbaI | TGATCA | 2 cut(s) | 940, 1203 |
| FblI | GTMKAC | 1 cut(s) | 1531 |
| Fnu4HI | GCNGC | 4 cut(s) | 288, 818, 1602, 1872 |
| FokI | GGATG | 5 cut(s) | 563, 698, 1179, 1213, 1243 |
| Fsp4HI | GCNGC | 4 cut(s) | 288, 818, 1602, 1872 |
| FspBI | CTAG | 7 cut(s) | 390, 429, 450, 549, 750, 1005, 2405 |
| GlaI | GCGC | 1 cut(s) | 2214 |
| GluI | GCNGC | 4 cut(s) | 288, 818, 1602, 1872 |
| GsaI | CCCAGC | 3 cut(s) | 603, 817, 1311 |
| GsuI | CTGGAG | 1 cut(s) | 1629 |
| HaeIII | GGCC | 5 cut(s) | 925, 1100, 1251, 1366, 1468 |
| HapII | CCGG | 6 cut(s) | 192, 436, 704, 926, 1889, 2203 |
| HgaI | GACGC | 4 cut(s) | 139, 265, 879, 2151 |
| HhaI | GCGC | 1 cut(s) | 2215 |
| Hin1I | GRCGYC | 2 cut(s) | 150, 2162 |
| Hin6I | GCGC | 1 cut(s) | 2213 |
| HinP1I | GCGC | 1 cut(s) | 2213 |
| HincII | GTYRAC | 1 cut(s) | 1532 |
| HindII | GTYRAC | 1 cut(s) | 1532 |
| HindIII | AAGCTT | 2 cut(s) | 161, 962 |
| HinfI | GANTC | 5 cut(s) | 573, 1194, 1657, 2128, 2382 |
| HpaII | CCGG | 6 cut(s) | 192, 436, 704, 926, 1889, 2203 |
| HphI | GGTGA | 5 cut(s) | 14, 165, 332, 523, 1352 |
| Hpy166II | GTNNAC | 4 cut(s) | 958, 1040, 1418, 1532 |
| Hpy8I | GTNNAC | 4 cut(s) | 958, 1040, 1418, 1532 |
| Hpy99I | CGWCG | 4 cut(s) | 119, 249, 873, 2233 |
| HpyAV | CCTTC | 9 cut(s) | 229, 911, 1429, 1505, 1509, 1577, 2321, 2402, 2424 |
| HpyCH4III | ACNGT | 1 cut(s) | 1037 |
| HpyCH4IV | ACGT | 4 cut(s) | 81, 85, 208, 1969 |
| HpyCH4V | TGCA | 4 cut(s) | 509, 1586, 1604, 2429 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 47, 52, 559 |
| HpyF3I | CTNAG | 3 cut(s) | 51, 1875, 2352 |
| HpySE526I | ACGT | 4 cut(s) | 81, 85, 208, 1969 |
| Hsp92I | GRCGYC | 2 cut(s) | 150, 2162 |
| HspAI | GCGC | 1 cut(s) | 2213 |
| KflI | GGGWCCC | 1 cut(s) | 1729 |
| Ksp22I | TGATCA | 2 cut(s) | 940, 1203 |
| LguI | GCTCTTC | 1 cut(s) | 1971 |
| LmnI | GCTCC | 5 cut(s) | 14, 249, 1396, 1438, 2366 |
| Lsp1109I | GCAGC | 3 cut(s) | 299, 829, 1588 |
| LweI | GCATC | 1 cut(s) | 1420 |
| MaeI | CTAG | 7 cut(s) | 390, 429, 450, 549, 750, 1005, 2405 |
| MaeII | ACGT | 4 cut(s) | 81, 85, 208, 1969 |
| MaeIII | GTNAC | 4 cut(s) | 58, 478, 529, 2053 |
| MbiI | CCGCTC | 3 cut(s) | 27, 1319, 1391 |
| MboII | GAAGA | 8 cut(s) | 361, 782, 946, 1463, 1494, 1988, 2166, 2284 |
| MflI | RGATCY | 4 cut(s) | 385, 746, 1619, 1891 |
| MhlI | GDGCHC | 2 cut(s) | 829, 2371 |
| MlsI | TGGCCA | 1 cut(s) | 1468 |
| MluNI | TGGCCA | 1 cut(s) | 1468 |
| MlyI | GAGTC | 3 cut(s) | 567, 2137, 2391 |
| MmeI | TCCRAC | 8 cut(s) | 57, 204, 227, 595, 604, 1295, 1723, 1925 |
| Mox20I | TGGCCA | 1 cut(s) | 1468 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1071 |
| MscI | TGGCCA | 1 cut(s) | 1468 |
| Msp20I | TGGCCA | 1 cut(s) | 1468 |
| MspA1I | CMGCKG | 4 cut(s) | 603, 1232, 1513, 1874 |
| MspI | CCGG | 6 cut(s) | 192, 436, 704, 926, 1889, 2203 |
| MvnI | CGCG | 1 cut(s) | 873 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 47, 52, 559 |
| NciI | CCSGG | 1 cut(s) | 705 |
| NcoI | CCATGG | 1 cut(s) | 1162 |
| NdeI | CATATG | 1 cut(s) | 1588 |
| NlaIV | GGNNCC | 7 cut(s) | 826, 1237, 1621, 1730, 1731, 1893, 2089 |
| NmuCI | GTSAC | 2 cut(s) | 529, 2053 |
| NspI | RCATGY | 1 cut(s) | 2429 |
| PagI | TCATGA | 2 cut(s) | 1908, 2124 |
| PaqCI | CACCTGC | 1 cut(s) | 46 |
| PceI | AGGCCT | 1 cut(s) | 1100 |
| PciSI | GCTCTTC | 1 cut(s) | 1971 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 344, 1857 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1071 |
| PfeI | GAWTC | 2 cut(s) | 1194, 1657 |
| Pfl23II | CGTACG | 1 cut(s) | 82 |
| PflFI | GACNNNGTC | 1 cut(s) | 873 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1189, 1829 |
| PkrI | GCNGC | 4 cut(s) | 289, 819, 1603, 1873 |
| Ple19I | CGATCG | 1 cut(s) | 1864 |
| PleI | GAGTC | 3 cut(s) | 567, 2136, 2390 |
| PpsI | GAGTC | 3 cut(s) | 567, 2136, 2390 |
| Ppu21I | YACGTR | 2 cut(s) | 86, 209 |
| PpuMI | RGGWCCY | 2 cut(s) | 1729, 2411 |
| PshBI | ATTAAT | 2 cut(s) | 2019, 2301 |
| Psp1406I | AACGTT | 1 cut(s) | 1969 |
| Psp5II | RGGWCCY | 2 cut(s) | 1729, 2411 |
| PspFI | CCCAGC | 3 cut(s) | 599, 813, 1307 |
| PspLI | CGTACG | 1 cut(s) | 82 |
| PspN4I | GGNNCC | 7 cut(s) | 826, 1237, 1621, 1730, 1731, 1893, 2089 |
| PspPI | GGNCC | 8 cut(s) | 1159, 1235, 1249, 1268, 1364, 1729, 1832, 2411 |
| PspPPI | RGGWCCY | 2 cut(s) | 1729, 2411 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1904, 1936 |
| PsuI | RGATCY | 4 cut(s) | 385, 746, 1619, 1891 |
| PsyI | GACNNNGTC | 1 cut(s) | 873 |
| PvuI | CGATCG | 1 cut(s) | 1864 |
| SalI | GTCGAC | 1 cut(s) | 1530 |
| SapI | GCTCTTC | 1 cut(s) | 1971 |
| SatI | GCNGC | 4 cut(s) | 288, 818, 1602, 1872 |
| Sau96I | GGNCC | 8 cut(s) | 1159, 1235, 1249, 1268, 1364, 1729, 1832, 2411 |
| ScaI | AGTACT | 2 cut(s) | 1133, 1297 |
| SchI | GAGTC | 3 cut(s) | 567, 2137, 2391 |
| SduI | GDGCHC | 2 cut(s) | 829, 2371 |
| SfaNI | GCATC | 1 cut(s) | 1420 |
| SfcI | CTRYAG | 2 cut(s) | 1176, 1711 |
| SinI | GGWCC | 6 cut(s) | 1159, 1235, 1268, 1729, 1832, 2411 |
| SmlI | CTYRAG | 1 cut(s) | 214 |
| SmoI | CTYRAG | 1 cut(s) | 214 |
| SnaBI | TACGTA | 2 cut(s) | 86, 209 |
| SseBI | AGGCCT | 1 cut(s) | 1100 |
| SspI | AATATT | 1 cut(s) | 2065 |
| SspMI | CTAG | 7 cut(s) | 390, 429, 450, 549, 750, 1005, 2405 |
| StuI | AGGCCT | 1 cut(s) | 1100 |
| StyI | CCWWGG | 1 cut(s) | 1162 |
| TaaI | ACNGT | 1 cut(s) | 1037 |
| TaiI | ACGT | 4 cut(s) | 84, 88, 211, 1972 |
| TatI | WGTACW | 4 cut(s) | 1131, 1295, 1540, 1920 |
| TauI | GCSGC | 1 cut(s) | 1874 |
| TfiI | GAWTC | 2 cut(s) | 1194, 1657 |
| TscAI | CASTG | 1 cut(s) | 1219 |
| TseFI | GTSAC | 2 cut(s) | 529, 2053 |
| TseI | GCWGC | 3 cut(s) | 287, 817, 1601 |
| Tsp45I | GTSAC | 2 cut(s) | 529, 2053 |
| TspDTI | ATGAA | 8 cut(s) | 425, 1006, 1233, 1571, 1925, 1989, 2264, 2340 |
| TspGWI | ACGGA | 1 cut(s) | 782 |
| TspRI | CASTG | 1 cut(s) | 1219 |
| Tth111I | GACNNNGTC | 1 cut(s) | 873 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1189, 1829 |
| VpaK11BI | GGWCC | 6 cut(s) | 1159, 1235, 1268, 1729, 1832, 2411 |
| VspI | ATTAAT | 2 cut(s) | 2019, 2301 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2376 |
| XapI | RAATTY | 5 cut(s) | 783, 977, 1220, 2100, 2271 |
| XbaI | TCTAGA | 1 cut(s) | 749 |
| XceI | RCATGY | 1 cut(s) | 2429 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 140 |
| XmiI | GTMKAC | 1 cut(s) | 1531 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1071 |
| XspI | CTAG | 7 cut(s) | 390, 429, 450, 549, 750, 1005, 2405 |
| ZrmI | AGTACT | 2 cut(s) | 1133, 1297 |