Rorug01G0484000

Methyltransferase FkbM domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000523
Physical Location & Seq
Reverse (-)
57082616 .. 57086647
4032 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0484000.1

Sequence Viewer

Length: 1614 bp
ATGATGAGGCTGCAAACTTACGCGGGCCTTAGCTTGATAGGAACCCTAGCGATTATTTACCATGCATTTAGCAGCAGAGGCCAGTTTTACCCCGCCATGGTTTACCTATCAACCTCCAAGATCAGTCTGGTGCTTCTTCTCAACACGGGCCTTGTCATCATGTGTATTTTGTGGCAACTGACTAAGAAGCTATTCCTCGGCTCACTCCGAGAGCCGGAGGTTGAGAGGCTTAATGAGCAGTCGTGGAGGGAAGTCATGGAGATTCTTTTCGCAATCACTATTTTCCGGCAGGACTTTTCGGTGTCGTTTCTGGCTTTTGTCACTGCTCTGTTGCTGATCAAGGCGCTGCATTGGTTGGCGCAGAAGAGGGTTGAGTACATTGAGACTACTCCGTCTGTTCCCACCCTGTGGCATGTTCGGATTGTCTCCTTTTTGGGGTTCTTGTTTGTTGTAGATAGTCTCTTTTTGTATACTTCTGTCAGCACCATCATTACGACTCAGAAGCCTTCGGTTTCCCTCTTTTTTGCATTCGAGTACATGATCCTAGCAACAACAACACTGTCAACATTTGTGAAATATGTTTTCTATGTTAGTGACATGATTATGGAGGGACAATGGGAGAGGAAGCATGTCTACACTTTCTATTTGGAACTTATTCGGGACTTGCTCCACTTATCTATGTATTTGTGCTTCTTCATCGTGATTTTCATGTACTATGGCTTGCCAGTGCACTTGATTCGCGAACTGTATGAGACGTTCAGGAACTTTAAGATTCGTGTTGCTGATTACCTCCGTTATCGAAAGATCACTTCAAACATGAATGACCGGTTCCCAGACGCTACACCTGAAGAGCTTACTTCAGGTGACGCAACCTGCATCATTTGTCGTGAAGAGATGACAACAGCCAAAAAACTATTATGTGGACACCTTTTTCATGTGGCTTGCTTGCGATCATGGTTAGAGCGACAACATACCTGTCCTACATGCCGAGCGCTTGTTGTACCTCCTGATGGTCGGACAGGTACAGCTCGAGGACAAGGTGGATCACGCTCCGATGCTCATCAACAGGGGACAGGCATATCAGGTACAACTGCTCAAGGTTCAACTAGTGGTGGAGGTGCTGGTGATAACATGAGCCATCATGAAGCAAGACTGCGAGCTGCTGCTGCAGCTGCATCTATATATGAGAAATCTTATGTATATCCATCTGCAAACAGACTAGTATGGTCTGCTGGATATGCCGCACTTCCTCTGGTTAATAGACATATGGCTGACTCCCCTAGTACTGATTTACAATCACAACCACTTGCAACCCCTGGTGGACCTGCAAACTTGTCATTGCCTCAATCTCCGCATTACATGTTTTCTCCTTTTCAAGGAGCCAATGGGGAGAGGTCGGGCAGCAATACAAATATAACAGCTTCTCAGCTGGAGGCCCAGAGAAAAGTTCTTCAGCACCAGATTGAGATCCTGCAGAATCAGCTCCAAATTTTACAAAAGCCAAAACCCAAGGAAAGTGTGGAAGGGGGTCCAACATTAGCAGATAGCAAAGGAAAGAGTGTTGCACCTTCGTCTGAATCAAATTGCGGGCGTCATGAGGATGTTGTTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_21

Protein Analysis

537

Amino Acids

60.21

Weight (kDa)

8.59

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_SYVN1_N PF25563 3 - 272 1.2e-105 E3 ubiquitin-protein ligase synoviolin-like, TPR repeats
zf-rbx1 PF12678 289 - 330 1.4e-07 RING-H2 zinc finger domain
zf-RING_2 PF13639 291 - 330 7.9e-11 Ring finger domain
zf-C3HC4 PF00097 292 - 329 7e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 292 - 327 1.3e-06 RING-type zinc-finger
zf-C3HC4_2 PF13923 292 - 329 3.1e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000523)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65210 AT2G22620 AT2G22620 AT2G22620 AT2G22620 AT2G22620 AT4G37950 AT4G37950 AT4G38030
fragaria_vesca FvH4_1g03290 FvH4_1g03300 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19200
malus_domestica MD01G1043200.v1.1 MD01G1043300.v1.1 MD02G1298500.v1.1 MD02G1307100.v1.1 MD04G1240500.v1.1 MD12G1256900.v1.1 MD12G1257400.v1.1 MD12G1257500.v1.1 MD15G1308100.v1.1 MD15G1308200.v1.1
prunus_persica Prupe.6G208400_v2.0.a1 Prupe.6G208400_v2.0.a1 Prupe.6G208400_v2.0.a1
pyrus_communis pycom01g07080 pycom15g27240
rosa_chinensis RchiOBHm_Chr2g0088421 RchiOBHm_Chr2g0088461 RchiOBHm_Chr2g0088481 RchiOBHm_Chr2g0110401 RchiOBHm_Chr2g0110411 RchiOBHm_Chr2g0110431
rosa_laevigata RLG00000003093 RLG00000015953 RLG00000015956 RLG00000015959 RLG00000017802 RLG00000017806
rosa_multiflora Rmu_sc0001393.1_g000003 Rmu_sc0001393.1_g000009 Rmu_sc0004733.1_g000013 Rmu_sc0004733.1_g000022
rosa_roxburghii Rroxscaffold_2G00133400 Rroxscaffold_2G00133420 Rroxscaffold_2G00152640 Rroxscaffold_2G00152680
rosa_rugosa Rorug01G0484000 Rorug01G0484200 Rorug01G0484600 Rorug02G0166800 Rorug02G0166900 Rorug02G0167000 Rorug02G0167500 Rorug02G0167600 Rorug02G0167800 Rorug02G0167800 Rorug07G0116100
rosa_samantha Rh2AG038500 Rh2AG038800 Rh2AG039000 Rh2AG219300 Rh2AG219400 Rh2BG038100 Rh2BG038400 Rh2BG228800 Rh2BG229000 Rh2CG039000 Rh2CG039600 Rh2CG221000 Rh2CG221200 Rh2DG038600 Rh2DG038800 Rh2DG225500 Rh2DG225600
rosa_wichuraiana Rw2G003060 Rw2G003080 Rw2G016930 Rw2G016940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 391
Acc36I ACCTGC 2 cut(s) 881, 1333
AccB7I CCANNNNNTGG 1 cut(s) 408
AccI GTMKAC 2 cut(s) 470, 633
AccII CGCG 2 cut(s) 23, 741
AciI CCGC 5 cut(s) 23, 93, 1242, 1352, 1587
AclWI GGATC 3 cut(s) 535, 1051, 1462
AcsI RAATTY 1 cut(s) 1488
AcuI CTGAAG 3 cut(s) 843, 867, 1436
AcyI GRCGYC 1 cut(s) 1591
AdeI CACNNNGTG 1 cut(s) 408
AfaI GTAC 7 cut(s) 377, 536, 713, 1002, 1024, 1087, 1285
AfeI AGCGCT 1 cut(s) 993
AfiI CCNNNNNNNGG 6 cut(s) 97, 214, 408, 435, 1010, 1376
AflIII ACRYGT 1 cut(s) 1359
AgeI ACCGGT 1 cut(s) 825
AgsI TTSAA 3 cut(s) 813, 1104, 1376
AhlI ACTAGT 2 cut(s) 1106, 1219
AjnI CCWGG 1 cut(s) 1315
AluBI AGCT 9 cut(s) 33, 190, 853, 1028, 1160, 1172, 1421, 1429, 1483
AluI AGCT 9 cut(s) 33, 190, 853, 1028, 1160, 1172, 1421, 1429, 1483
Alw21I GWGCWC 1 cut(s) 732
Alw26I GTCTC 4 cut(s) 377, 430, 464, 746
Alw44I GTGCAC 1 cut(s) 728
AlwI GGATC 3 cut(s) 535, 1051, 1462
Ama87I CYCGRG 1 cut(s) 1029
Aor51HI AGCGCT 1 cut(s) 993
AoxI GGCC 4 cut(s) 25, 79, 148, 1434
ApaLI GTGCAC 1 cut(s) 728
ApeKI GCWGC 9 cut(s) 10, 72, 346, 1160, 1163, 1166, 1169, 1172, 1401
ApoI RAATTY 1 cut(s) 1488
AsiGI ACCGGT 1 cut(s) 825
Asp700I GAANNNNTTC 2 cut(s) 191, 654
AspLEI GCGC 3 cut(s) 346, 361, 994
AspS9I GGNCC 5 cut(s) 25, 148, 1322, 1435, 1529
AsuHPI GGTGA 2 cut(s) 875, 1136
AvaI CYCGRG 1 cut(s) 1029
AvaII GGWCC 2 cut(s) 1322, 1529
BaeGI GKGCMC 1 cut(s) 732
BarI GAAGNNNNNNTAC 4 cut(s) 617, 649, 674, 706
Bbv12I GWGCWC 1 cut(s) 732
BbvI GCAGC 8 cut(s) 84, 333, 1147, 1150, 1153, 1159, 1181, 1413
BccI CCATC 4 cut(s) 494, 1004, 1146, 1213
BcgI CGANNNNNNTGC 2 cut(s) 719, 753
BciT130I CCWGG 1 cut(s) 1317
BclI TGATCA 1 cut(s) 336
BcoDI GTCTC 4 cut(s) 377, 430, 464, 746
BcuI ACTAGT 2 cut(s) 1106, 1219
BfaI CTAG 6 cut(s) 47, 545, 1107, 1220, 1281, 1612
BfmI CTRYAG 2 cut(s) 1167, 1472
BfoI RGCGCY 2 cut(s) 347, 995
BfuAI ACCTGC 2 cut(s) 881, 1333
BmcAI AGTACT 1 cut(s) 1285
Bme1390I CCNGG 1 cut(s) 1317
Bme18I GGWCC 2 cut(s) 1322, 1529
BmeT110I CYCGRG 1 cut(s) 1029
BmgT120I GGNCC 5 cut(s) 25, 148, 1322, 1435, 1529
BmiI GGNNCC 4 cut(s) 43, 830, 1381, 1530
BmrFI CCNGG 1 cut(s) 1317
BmsI GCATC 3 cut(s) 885, 1045, 1184
BpmI CTGGAG 1 cut(s) 1451
Bpu10I CCTNAGC 1 cut(s) 29
BpuEI CTTGAG 1 cut(s) 1080
BsaBI GATNNNNATC 2 cut(s) 1059, 1466
BsaHI GRCGYC 1 cut(s) 1591
BsaJI CCNNGG 4 cut(s) 96, 196, 1315, 1509
BsaWI WCCGGW 1 cut(s) 825
Bsc4I CCNNNNNNNGG 6 cut(s) 97, 214, 408, 435, 1010, 1376
Bse118I RCCGGY 1 cut(s) 825
Bse1I ACTGG 2 cut(s) 82, 725
Bse3DI GCAATG 1 cut(s) 1337
Bse8I GATNNNNATC 2 cut(s) 1059, 1466
BseBI CCWGG 1 cut(s) 1317
BseDI CCNNGG 4 cut(s) 96, 196, 1315, 1509
BseGI GGATG 1 cut(s) 1606
BseJI GATNNNNATC 2 cut(s) 1059, 1466
BseLI CCNNNNNNNGG 6 cut(s) 97, 214, 408, 435, 1010, 1376
BseMI GCAATG 1 cut(s) 1337
BseMII CTCAG 2 cut(s) 512, 1439
BseNI ACTGG 2 cut(s) 82, 725
BseSI GKGCMC 1 cut(s) 732
BseXI GCAGC 8 cut(s) 84, 333, 1147, 1150, 1153, 1159, 1181, 1413
Bsh1236I CGCG 2 cut(s) 23, 741
BshFI GGCC 4 cut(s) 27, 81, 150, 1436
BshTI ACCGGT 1 cut(s) 825
BsiHKAI GWGCWC 1 cut(s) 732
BsiHKCI CYCGRG 1 cut(s) 1029
BsiSI CCGG 3 cut(s) 215, 286, 826
BslFI GGGAC 3 cut(s) 624, 674, 1084
BslI CCNNNNNNNGG 6 cut(s) 97, 214, 408, 435, 1010, 1376
BsmAI GTCTC 4 cut(s) 377, 430, 464, 746
BsmBI CGTCTC 1 cut(s) 746
BsmFI GGGAC 3 cut(s) 624, 674, 1084
BsmI GAATGC 1 cut(s) 527
BsnI GGCC 4 cut(s) 27, 81, 150, 1436
BsoBI CYCGRG 1 cut(s) 1029
Bsp1286I GDGCHC 1 cut(s) 732
Bsp143I GATC 7 cut(s) 120, 336, 540, 804, 950, 1043, 1467
Bsp19I CCATGG 1 cut(s) 96
Bsp68I TCGCGA 1 cut(s) 741
BspACI CCGC 5 cut(s) 23, 93, 1242, 1352, 1587
BspANI GGCC 4 cut(s) 27, 81, 150, 1436
BspCNI CTCAG 2 cut(s) 511, 1438
BspFNI CGCG 2 cut(s) 23, 741
BspHI TCATGA 2 cut(s) 1141, 1594
BspLI GGNNCC 4 cut(s) 43, 830, 1381, 1530
BspMAI CTGCAG 2 cut(s) 1171, 1476
BspMI ACCTGC 2 cut(s) 881, 1333
BspPI GGATC 3 cut(s) 535, 1051, 1462
BspQI GCTCTTC 1 cut(s) 843
BsrDI GCAATG 1 cut(s) 1337
BsrFI RCCGGY 1 cut(s) 825
BsrI ACTGG 2 cut(s) 82, 725
BssAI RCCGGY 1 cut(s) 825
BssECI CCNNGG 4 cut(s) 96, 196, 1315, 1509
BssMI GATC 7 cut(s) 120, 336, 540, 804, 950, 1043, 1467
BssNAI GTATAC 1 cut(s) 471
BssNI GRCGYC 1 cut(s) 1591
BssT1I CCWWGG 2 cut(s) 96, 1509
Bst1107I GTATAC 1 cut(s) 471
Bst2UI CCWGG 1 cut(s) 1317
Bst4CI ACNGT 2 cut(s) 561, 747
Bst6I CTCTTC 3 cut(s) 359, 843, 885
BstACI GRCGYC 1 cut(s) 1591
BstC8I GCNNGC 6 cut(s) 25, 722, 943, 947, 1158, 1589
BstDEI CTNAG 4 cut(s) 29, 183, 498, 1425
BstDSI CCRYGG 1 cut(s) 96
BstENI CCTNNNNNAGG 1 cut(s) 1374
BstF5I GGATG 1 cut(s) 1606
BstFNI CGCG 2 cut(s) 23, 741
BstH2I RGCGCY 2 cut(s) 347, 995
BstHHI GCGC 3 cut(s) 346, 361, 994
BstKTI GATC 7 cut(s) 123, 339, 543, 807, 953, 1046, 1470
BstMAI GTCTC 4 cut(s) 377, 430, 464, 746
BstMBI GATC 7 cut(s) 120, 336, 540, 804, 950, 1043, 1467
BstMWI GCNNNNNNNGC 7 cut(s) 78, 235, 1166, 1169, 1172, 1238, 1480
BstNI CCWGG 1 cut(s) 1317
BstNSI RCATGY 4 cut(s) 416, 632, 987, 1363
BstSCI CCNGG 1 cut(s) 1315
BstSFI CTRYAG 2 cut(s) 1167, 1472
BstSLI GKGCMC 1 cut(s) 732
BstUI CGCG 2 cut(s) 23, 741
BstV1I GCAGC 8 cut(s) 84, 333, 1147, 1150, 1153, 1159, 1181, 1413
BstX2I RGATCY 1 cut(s) 1467
BstYI RGATCY 1 cut(s) 1467
BstZ17I GTATAC 1 cut(s) 471
BsuRI GGCC 4 cut(s) 27, 81, 150, 1436
BtgI CCRYGG 1 cut(s) 96
BtsCI GGATG 1 cut(s) 1606
BtsI GCAGTG 1 cut(s) 321
BtsIMutI CAGTG 3 cut(s) 321, 557, 732
BtuMI TCGCGA 1 cut(s) 741
BveI ACCTGC 2 cut(s) 881, 1333
Cac8I GCNNGC 6 cut(s) 25, 722, 943, 947, 1158, 1589
CciI TCATGA 2 cut(s) 1141, 1594
CfoI GCGC 3 cut(s) 346, 361, 994
Cfr10I RCCGGY 1 cut(s) 825
Cfr13I GGNCC 5 cut(s) 25, 148, 1322, 1435, 1529
CseI GACGC 3 cut(s) 845, 875, 1580
Csp6I GTAC 7 cut(s) 376, 535, 712, 1001, 1023, 1086, 1284
CspAI ACCGGT 1 cut(s) 825
CviQI GTAC 7 cut(s) 376, 535, 712, 1001, 1023, 1086, 1284
DdeI CTNAG 4 cut(s) 29, 183, 498, 1425
DpnI GATC 7 cut(s) 122, 338, 542, 806, 952, 1045, 1469
DpnII GATC 7 cut(s) 120, 336, 540, 804, 950, 1043, 1467
DraIII CACNNNGTG 1 cut(s) 408
DrdI GACNNNNNNGTC 1 cut(s) 391
DseDI GACNNNNNNGTC 1 cut(s) 391
Eam1104I CTCTTC 3 cut(s) 359, 843, 885
EarI CTCTTC 3 cut(s) 359, 843, 885
Eco130I CCWWGG 2 cut(s) 96, 1509
Eco47I GGWCC 2 cut(s) 1322, 1529
Eco47III AGCGCT 1 cut(s) 993
Eco57I CTGAAG 3 cut(s) 843, 867, 1436
Eco88I CYCGRG 1 cut(s) 1029
EcoNI CCTNNNNNAGG 1 cut(s) 1374
EcoRII CCWGG 1 cut(s) 1315
EcoT14I CCWWGG 2 cut(s) 96, 1509
EcoT22I ATGCAT 1 cut(s) 67
ErhI CCWWGG 2 cut(s) 96, 1509
Esp3I CGTCTC 1 cut(s) 746
FaqI GGGAC 3 cut(s) 624, 674, 1084
FauI CCCGC 3 cut(s) 16, 100, 1580
FauNDI CATATG 1 cut(s) 1266
FbaI TGATCA 1 cut(s) 336
FblI GTMKAC 2 cut(s) 470, 633
FspBI CTAG 6 cut(s) 47, 545, 1107, 1220, 1281, 1612
GlaI GCGC 3 cut(s) 345, 360, 993
GsuI CTGGAG 1 cut(s) 1451
HaeII RGCGCY 2 cut(s) 347, 995
HaeIII GGCC 4 cut(s) 27, 81, 150, 1436
HapII CCGG 3 cut(s) 215, 286, 826
HgaI GACGC 3 cut(s) 845, 875, 1580
HhaI GCGC 3 cut(s) 346, 361, 994
Hin1I GRCGYC 1 cut(s) 1591
Hin6I GCGC 3 cut(s) 344, 359, 992
HinP1I GCGC 3 cut(s) 344, 359, 992
HincII GTYRAC 2 cut(s) 564, 1609
HindII GTYRAC 2 cut(s) 564, 1609
HinfI GANTC 7 cut(s) 262, 496, 736, 772, 1274, 1477, 1577
HpaII CCGG 3 cut(s) 215, 286, 826
HphI GGTGA 2 cut(s) 875, 1136
Hpy166II GTNNAC 8 cut(s) 103, 471, 564, 634, 730, 923, 1322, 1609
Hpy188I TCNGA 6 cut(s) 209, 420, 501, 1017, 1054, 1576
Hpy188III TCNNGA 8 cut(s) 659, 700, 740, 760, 887, 1007, 1142, 1595
Hpy8I GTNNAC 8 cut(s) 103, 471, 564, 634, 730, 923, 1322, 1609
HpyAV CCTTC 3 cut(s) 516, 1517, 1578
HpyCH4III ACNGT 2 cut(s) 561, 747
HpyCH4IV ACGT 1 cut(s) 755
HpyF10VI GCNNNNNNNGC 7 cut(s) 78, 235, 1166, 1169, 1172, 1238, 1480
HpyF3I CTNAG 4 cut(s) 29, 183, 498, 1425
HpySE526I ACGT 1 cut(s) 755
Hsp92I GRCGYC 1 cut(s) 1591
HspAI GCGC 3 cut(s) 344, 359, 992
Ksp22I TGATCA 1 cut(s) 336
Kzo9I GATC 7 cut(s) 120, 336, 540, 804, 950, 1043, 1467
LguI GCTCTTC 1 cut(s) 843
LmnI GCTCC 4 cut(s) 672, 1055, 1379, 1488
Lsp1109I GCAGC 8 cut(s) 84, 333, 1147, 1150, 1153, 1159, 1181, 1413
LweI GCATC 3 cut(s) 885, 1045, 1184
MaeI CTAG 6 cut(s) 47, 545, 1107, 1220, 1281, 1612
MaeII ACGT 1 cut(s) 755
MaeIII GTNAC 3 cut(s) 319, 593, 863
MalI GATC 7 cut(s) 122, 338, 542, 806, 952, 1045, 1469
MboI GATC 7 cut(s) 120, 336, 540, 804, 950, 1043, 1467
MboII GAAGA 6 cut(s) 128, 376, 685, 860, 902, 1442
MflI RGATCY 1 cut(s) 1467
MhlI GDGCHC 1 cut(s) 732
MluCI AATT 2 cut(s) 1488, 1582
MlyI GAGTC 2 cut(s) 490, 1268
MmeI TCCRAC 2 cut(s) 995, 1556
Mph1103I ATGCAT 1 cut(s) 67
MroXI GAANNNNTTC 2 cut(s) 191, 654
MseI TTAA 3 cut(s) 231, 768, 1257
MslI CAYNNNNRTG 2 cut(s) 602, 1599
MspA1I CMGCKG 2 cut(s) 1172, 1429
MspI CCGG 3 cut(s) 215, 286, 826
MspR9I CCNGG 1 cut(s) 1317
Mva1269I GAATGC 1 cut(s) 527
MvaI CCWGG 1 cut(s) 1317
MvnI CGCG 2 cut(s) 23, 741
MwoI GCNNNNNNNGC 7 cut(s) 78, 235, 1166, 1169, 1172, 1238, 1480
NcoI CCATGG 1 cut(s) 96
NdeI CATATG 1 cut(s) 1266
NdeII GATC 7 cut(s) 120, 336, 540, 804, 950, 1043, 1467
NlaIV GGNNCC 4 cut(s) 43, 830, 1381, 1530
NmeAIII GCCGAG 2 cut(s) 177, 1013
NmuCI GTSAC 3 cut(s) 319, 593, 863
NruI TCGCGA 1 cut(s) 741
NsiI ATGCAT 1 cut(s) 67
NspI RCATGY 4 cut(s) 416, 632, 987, 1363
PaeR7I CTCGAG 1 cut(s) 1029
PagI TCATGA 2 cut(s) 1141, 1594
PciI ACATGT 1 cut(s) 1359
PciSI GCTCTTC 1 cut(s) 843
PctI GAATGC 1 cut(s) 527
PdmI GAANNNNTTC 2 cut(s) 191, 654
PfeI GAWTC 5 cut(s) 262, 736, 772, 1477, 1577
PflMI CCANNNNNTGG 1 cut(s) 408
PinAI ACCGGT 1 cut(s) 825
PleI GAGTC 2 cut(s) 490, 1268
PpsI GAGTC 2 cut(s) 490, 1268
PscI ACATGT 1 cut(s) 1359
Psp6I CCWGG 1 cut(s) 1315
PspGI CCWGG 1 cut(s) 1315
PspN4I GGNNCC 4 cut(s) 43, 830, 1381, 1530
PspPI GGNCC 5 cut(s) 25, 148, 1322, 1435, 1529
PspXI VCTCGAGB 1 cut(s) 1029
PsrI GAACNNNNNNTAC 2 cut(s) 740, 772
PstI CTGCAG 2 cut(s) 1171, 1476
PsuI RGATCY 1 cut(s) 1467
PvuII CAGCTG 2 cut(s) 1172, 1429
RruI TCGCGA 1 cut(s) 741
RsaI GTAC 7 cut(s) 377, 536, 713, 1002, 1024, 1087, 1285
RsaNI GTAC 7 cut(s) 376, 535, 712, 1001, 1023, 1086, 1284
RseI CAYNNNNRTG 2 cut(s) 602, 1599
SapI GCTCTTC 1 cut(s) 843
SaqAI TTAA 3 cut(s) 231, 768, 1257
Sau3AI GATC 7 cut(s) 120, 336, 540, 804, 950, 1043, 1467
Sau96I GGNCC 5 cut(s) 25, 148, 1322, 1435, 1529
ScaI AGTACT 1 cut(s) 1285
SchI GAGTC 2 cut(s) 490, 1268
ScrFI CCNGG 1 cut(s) 1317
SduI GDGCHC 1 cut(s) 732
SfaNI GCATC 3 cut(s) 885, 1045, 1184
SfcI CTRYAG 2 cut(s) 1167, 1472
Sfr274I CTCGAG 1 cut(s) 1029
SinI GGWCC 2 cut(s) 1322, 1529
SlaI CTCGAG 1 cut(s) 1029
SmiMI CAYNNNNRTG 2 cut(s) 602, 1599
SmlI CTYRAG 2 cut(s) 1029, 1095
SmoI CTYRAG 2 cut(s) 1029, 1095
SpeI ACTAGT 2 cut(s) 1106, 1219
Sse9I AATT 2 cut(s) 1488, 1582
SsiI CCGC 5 cut(s) 23, 93, 1242, 1352, 1587
SspMI CTAG 6 cut(s) 47, 545, 1107, 1220, 1281, 1612
StyD4I CCNGG 1 cut(s) 1315
StyI CCWWGG 2 cut(s) 96, 1509
TaaI ACNGT 2 cut(s) 561, 747
TaiI ACGT 1 cut(s) 758
TaqI TCGA 3 cut(s) 531, 799, 1030
TasI AATT 2 cut(s) 1488, 1582
TatI WGTACW 4 cut(s) 375, 534, 711, 1283
TauI GCSGC 1 cut(s) 1244
TfiI GAWTC 5 cut(s) 262, 736, 772, 1477, 1577
Tru1I TTAA 3 cut(s) 231, 768, 1257
Tru9I TTAA 3 cut(s) 231, 768, 1257
TscAI CASTG 3 cut(s) 328, 564, 732
TseFI GTSAC 3 cut(s) 319, 593, 863
TseI GCWGC 9 cut(s) 10, 72, 346, 1160, 1163, 1166, 1169, 1172, 1401
Tsp45I GTSAC 3 cut(s) 319, 593, 863
TspDTI ATGAA 5 cut(s) 685, 697, 833, 923, 1158
TspGWI ACGGA 2 cut(s) 381, 782
TspRI CASTG 3 cut(s) 328, 564, 732
Van91I CCANNNNNTGG 1 cut(s) 408
VneI GTGCAC 1 cut(s) 728
VpaK11BI GGWCC 2 cut(s) 1322, 1529
XagI CCTNNNNNAGG 1 cut(s) 1374
XapI RAATTY 1 cut(s) 1488
XceI RCATGY 4 cut(s) 416, 632, 987, 1363
XcmI CCANNNNNNNNNTGG 2 cut(s) 124, 1516
XhoI CTCGAG 1 cut(s) 1029
XmiI GTMKAC 2 cut(s) 470, 633
XmnI GAANNNNTTC 2 cut(s) 191, 654
XspI CTAG 6 cut(s) 47, 545, 1107, 1220, 1281, 1612
ZrmI AGTACT 1 cut(s) 1285
Zsp2I ATGCAT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.