Rh2CG221200

Rhamnogalacturonate lyase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
22183364 .. 22189929
6566 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG221200.1

Sequence Viewer

Length: 2214 bp
ATGGAGAAGGCGGATCGTCGGAGCTTGACGCATTGGGGTTTGCTTGTTGGGACATTAGCAGCAATGCTTGTTCTGGTTGTTTGCCTGGTTGGTGAAAAAAAATACGAGACGACCACCCCGAAGACCACCCTACAATTAAGAAAATTACTTCGGAGAGATCCTAGAACACTATGCCAGGGCATGAACATTCTGAAAATCCCTAGTAGCCGGAGGAACATTGCTAGACCACCAAATCCAGGGTTCAACATGGTAACAAAGAATAGTGGGCGGAGGATTGTTGCAAGAACACAACATCGGATAGTCACCATGCTAAAGACTCCTAGGCAGATTACGCTGGATAATGGCCTCATCCAACTAATAGTCTCTCGTCCCAGCGGAGATGTCGTTGGAATAAAATACAAACGAAGCGACAACTTGCTTGAACCCAATAATCTACGAAATAATAGAGGGTACTGGGATGTGGTCTGGAACAAACCGGGAGATAATATATATTATGTTGATAAACTACAAGCAACGAGATCTAGAGTTATTATGGCAACGGAAGACCAAATTGAAATTTCTTTTGTCAAAACATATAATGTTTCCCAGCAGCGTGGTGCCCCTGAAGTTCCTTTGAATGTAGATAAAAGGTACATAATGCGACGCGGTCGTTCAGGGTTCTATGCGTATGCCATATTCGAGTGCCTTGAAGGGTGGCCGGAAGTGAAGATTGATCAAGTTAGAATGGTTTACAAGCTTCAAAAAGACAAATTTCAGTATATGGCTTTATCAGACACTAGGCAAACATTCATGCCAAGAGCCAACGACCGTAAACATGGTCAGCAACTTGCCTATCCTGAAGCCGTCCGTTTGACCAAACCAAGTAATCAGGCCTTTAAAGGACAGGTCGATGACAAGTACCAGTACTCAATGGAGGACAAAGATAACAAGGTCCATGGATGGATTTCTACAGACCATTCGGTGGGATTCTGGATGATCACACCCAGTGATGAATTTCGTTCCGCTGGACCCATGAAGCAGGGCCTAACATCCCATGTTGGTCCAACTACCCTCTCGATGTTTGTTAGTACTCATTATGCTGGGAAGCGTGCGGGGATAGAATTGAAAAAAGGTGAGGCATGGAAAAAGGTTTTTGGGCCTGTCTTTGTGTATCTTAATTCCGCTCTAAGATCAAAAAATACCACCGGTACACTCTGGAATGATGCGAAGGAGCAGATGATTGAAGAAGTCAAAAGATGGCCATACAATTTCACTCAATCCAAAGACCTTCCTTCTTCAGATCAACGGGGATCGATTTGTGGTCGACTAATAGTACATGATCGGTACATGAATGAGAGCCTTCTTTCGGAAAGTTCTGCATATGTGGGATTAGCTGCACCTGGAGAAGTGGGATCCTGGCAAACAGAAAGTAAGGGATACCAATTCTGGATTCGAGCTGACAAACAAAGTTATTTTCTCATTAAAGATGTTCGACCTGGGAACTATAGTCTGTATGCTTGGGTCCCAGGCATTGTTGGAGATTACAAATATGGGGCTGATATTACCATTAAACCAGGAAGTAAAATCAATTTGGGTAATCTTACTTATGAGCCTCCAAGAAATGGTCCTACCTTGTGGGAAATCGGTATCCCCGATCGAAGTGCCGCTGAGTTCTATGTACCGGATCCATATCCAACTCTCATGAACAAATTGTACAAAAACAATCACTCGGACAACAGGTTTAGACAATACGGGCTGTGGAAACGTTATGAAGAGCTGTACCCCCACCATGATCTTATCTACACCATTGGCATTAATGATTATCGTTATGATTGGTTCTATGCTCATGTGACCAGGAATATTGGAAAGCAAAAGTATGTGGGAACCACCTGGCAAATTCGATTTAAACTTAACAATGTCATGAGTCAAGGAAATTATACACTCCAATTAGCATTGGCGTCCGCTACTTCTTCAGAAATACAGGTTCGATTTAACAACCGGAGTATTGCGCCACCTCATTTTTCGACGGGGCTAATAGGAGGGGACAATGCCATAGCAAGACATGGAATTCATGGTTTGTATTGGTTCTTCAGTATTAACGTACCAAGTTCTCTGCTAAATGAAGGAAACAACACAATCTATCTTACTCAGTCCAGAGGGGGAGCACCTTTTCGAGGAGTCATGTATGACTATATTAGACTAGAAGGACCTTCCATTAGACATGCAGACACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

737

Amino Acids

84.54

Weight (kDa)

9.68

Isoelectric Point (pI)

44.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rhamnogal_lyase PF06045 93 - 296 1.4e-73 Rhamnogalacturonate lyase family
fn3_3 PF14686 452 - 524 2.1e-24 Polysaccharide lyase family 4, domain II
CBM-like PF14683 537 - 727 1.4e-49 Polysaccharide lyase family 4, domain III
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000523)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65210 AT2G22620 AT2G22620 AT2G22620 AT2G22620 AT2G22620 AT4G37950 AT4G37950 AT4G38030
fragaria_vesca FvH4_1g03290 FvH4_1g03300 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19200
malus_domestica MD01G1043200.v1.1 MD01G1043300.v1.1 MD02G1298500.v1.1 MD02G1307100.v1.1 MD04G1240500.v1.1 MD12G1256900.v1.1 MD12G1257400.v1.1 MD12G1257500.v1.1 MD15G1308100.v1.1 MD15G1308200.v1.1
prunus_persica Prupe.6G208400_v2.0.a1 Prupe.6G208400_v2.0.a1 Prupe.6G208400_v2.0.a1
pyrus_communis pycom01g07080 pycom15g27240
rosa_chinensis RchiOBHm_Chr2g0088421 RchiOBHm_Chr2g0088461 RchiOBHm_Chr2g0088481 RchiOBHm_Chr2g0110401 RchiOBHm_Chr2g0110411 RchiOBHm_Chr2g0110431
rosa_laevigata RLG00000003093 RLG00000015953 RLG00000015956 RLG00000015959 RLG00000017802 RLG00000017806
rosa_multiflora Rmu_sc0001393.1_g000003 Rmu_sc0001393.1_g000009 Rmu_sc0004733.1_g000013 Rmu_sc0004733.1_g000022
rosa_roxburghii Rroxscaffold_2G00133400 Rroxscaffold_2G00133420 Rroxscaffold_2G00152640 Rroxscaffold_2G00152680
rosa_rugosa Rorug01G0484000 Rorug01G0484200 Rorug01G0484600 Rorug02G0166800 Rorug02G0166900 Rorug02G0167000 Rorug02G0167500 Rorug02G0167600 Rorug02G0167800 Rorug02G0167800 Rorug07G0116100
rosa_samantha Rh2AG038500 Rh2AG038800 Rh2AG039000 Rh2AG219300 Rh2AG219400 Rh2BG038100 Rh2BG038400 Rh2BG228800 Rh2BG229000 Rh2CG039000 Rh2CG039600 Rh2CG221000 Rh2CG221200 Rh2DG038600 Rh2DG038800 Rh2DG225500 Rh2DG225600
rosa_wichuraiana Rw2G003060 Rw2G003080 Rw2G016930 Rw2G016940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 596
AccB7I CCANNNNNTGG 2 cut(s) 961, 1601
AccBSI CCGCTC 1 cut(s) 1163
AccI GTMKAC 1 cut(s) 1303
AccII CGCG 1 cut(s) 645
AciI CCGC 9 cut(s) 11, 268, 375, 645, 1002, 1091, 1161, 1644, 1941
AclI AACGTT 1 cut(s) 1744
AclWI GGATC 7 cut(s) 21, 152, 1297, 1386, 1399, 1658, 1671
AcoI YGGCCR 2 cut(s) 695, 1238
AcsI RAATTY 5 cut(s) 555, 749, 992, 1875, 2046
AcuI CTGAAG 5 cut(s) 624, 858, 1260, 1935, 2053
AcyI GRCGYC 1 cut(s) 1937
AdeI CACNNNGTG 1 cut(s) 986
AfiI CCNNNNNNNGG 5 cut(s) 236, 961, 1345, 1601, 2153
AgeI ACCGGT 1 cut(s) 1184
AgsI TTSAA 8 cut(s) 244, 422, 554, 616, 689, 740, 1105, 1223
AjuI GAANNNNNNNTTGG 2 cut(s) 1413, 1445
AluBI AGCT 5 cut(s) 24, 736, 1373, 1436, 1756
AluI AGCT 5 cut(s) 24, 736, 1373, 1436, 1756
Alw21I GWGCWC 1 cut(s) 2146
Alw26I GTCTC 2 cut(s) 101, 367
AlwI GGATC 7 cut(s) 21, 152, 1297, 1386, 1399, 1658, 1671
AoxI GGCC 6 cut(s) 343, 695, 870, 1021, 1136, 1238
ApeKI GCWGC 3 cut(s) 59, 589, 1373
ApoI RAATTY 5 cut(s) 555, 749, 992, 1875, 2046
AseI ATTAAT 1 cut(s) 1794
AsiGI ACCGGT 1 cut(s) 1184
AspA2I CCTAGG 1 cut(s) 320
AspLEI GCGC 1 cut(s) 1990
AspS9I GGNCC 8 cut(s) 931, 1007, 1021, 1040, 1136, 1501, 1604, 2186
AsuC2I CCSGG 1 cut(s) 477
AsuHPI GGTGA 3 cut(s) 104, 295, 1124
AvaII GGWCC 6 cut(s) 931, 1007, 1040, 1501, 1604, 2186
AvrII CCTAGG 1 cut(s) 320
BaeGI GKGCMC 1 cut(s) 601
BalI TGGCCA 1 cut(s) 1240
BamHI GGATCC 2 cut(s) 1391, 1663
BanI GGYRCC 1 cut(s) 596
BarI GAAGNNNNNNTAC 2 cut(s) 2051, 2083
BbsI GAAGAC 2 cut(s) 128, 549
Bbv12I GWGCWC 1 cut(s) 2146
BbvI GCAGC 3 cut(s) 71, 601, 1360
BccI CCATC 2 cut(s) 933, 1230
BceAI ACGGC 1 cut(s) 827
BcgI CGANNNNNNTGC 2 cut(s) 1622, 1656
BciVI GTATCC 2 cut(s) 1409, 1637
BclI TGATCA 2 cut(s) 712, 975
BcnI CCSGG 1 cut(s) 477
BcoDI GTCTC 2 cut(s) 101, 367
BfaI CTAG 7 cut(s) 162, 201, 222, 321, 522, 777, 2180
BfmI CTRYAG 2 cut(s) 948, 1483
BfuI GTATCC 2 cut(s) 1409, 1637
BglII AGATCT 1 cut(s) 518
BisI GCNGC 4 cut(s) 60, 590, 1374, 1644
BlnI CCTAGG 1 cut(s) 320
BlsI GCNGC 4 cut(s) 61, 591, 1375, 1645
BmcAI AGTACT 2 cut(s) 905, 1069
Bme18I GGWCC 6 cut(s) 931, 1007, 1040, 1501, 1604, 2186
BmgT120I GGNCC 8 cut(s) 931, 1007, 1021, 1040, 1136, 1501, 1604, 2186
BmiI GGNNCC 7 cut(s) 598, 1009, 1393, 1502, 1503, 1665, 1864
BmrI ACTGGG 2 cut(s) 463, 978
BmsI GCATC 1 cut(s) 1192
BmuI ACTGGG 2 cut(s) 463, 978
BpiI GAAGAC 2 cut(s) 128, 549
BpmI CTGGAG 1 cut(s) 1401
BpuMI CCSGG 1 cut(s) 477
Bsa29I ATCGAT 1 cut(s) 1292
BsaBI GATNNNNATC 1 cut(s) 1668
BsaHI GRCGYC 1 cut(s) 1937
BsaJI CCNNGG 6 cut(s) 175, 236, 320, 934, 1475, 1504
BsaWI WCCGGW 3 cut(s) 1184, 1660, 1977
BsaXI ACNNNNNCTCC 2 cut(s) 369, 399
Bsc4I CCNNNNNNNGG 5 cut(s) 236, 961, 1345, 1601, 2153
Bse118I RCCGGY 1 cut(s) 1184
Bse1I ACTGG 3 cut(s) 458, 901, 984
Bse3DI GCAATG 2 cut(s) 69, 216
Bse8I GATNNNNATC 1 cut(s) 1668
BseCI ATCGAT 1 cut(s) 1292
BseDI CCNNGG 6 cut(s) 175, 236, 320, 934, 1475, 1504
BseGI GGATG 5 cut(s) 348, 463, 944, 978, 1028
BseJI GATNNNNATC 1 cut(s) 1668
BseLI CCNNNNNNNGG 5 cut(s) 236, 961, 1345, 1601, 2153
BseMI GCAATG 2 cut(s) 69, 216
BseMII CTCAG 2 cut(s) 1638, 2141
BseNI ACTGG 3 cut(s) 458, 901, 984
BseRI GAGGAG 1 cut(s) 2169
BseSI GKGCMC 1 cut(s) 601
BseXI GCAGC 3 cut(s) 71, 601, 1360
BseYI CCCAGC 3 cut(s) 371, 585, 1079
BsgI GTGCAG 1 cut(s) 1359
Bsh1236I CGCG 1 cut(s) 645
Bsh1285I CGRYCG 3 cut(s) 649, 808, 1636
BshFI GGCC 6 cut(s) 345, 697, 872, 1023, 1138, 1240
BshNI GGYRCC 1 cut(s) 596
BshTI ACCGGT 1 cut(s) 1184
BshVI ATCGAT 1 cut(s) 1292
BsiEI CGRYCG 3 cut(s) 649, 808, 1636
BsiHKAI GWGCWC 1 cut(s) 2146
BsiSI CCGG 6 cut(s) 208, 476, 698, 1185, 1661, 1978
BslFI GGGAC 4 cut(s) 64, 354, 1487, 2036
BslI CCNNNNNNNGG 5 cut(s) 236, 961, 1345, 1601, 2153
BsmAI GTCTC 2 cut(s) 101, 367
BsmBI CGTCTC 1 cut(s) 101
BsmFI GGGAC 4 cut(s) 64, 354, 1487, 2036
BsnI GGCC 6 cut(s) 345, 697, 872, 1023, 1138, 1240
Bsp1286I GDGCHC 2 cut(s) 601, 2146
Bsp1407I TGTACA 1 cut(s) 1692
Bsp19I CCATGG 1 cut(s) 934
BspACI CCGC 9 cut(s) 11, 268, 375, 645, 1002, 1091, 1161, 1644, 1941
BspANI GGCC 6 cut(s) 345, 697, 872, 1023, 1138, 1240
BspCNI CTCAG 2 cut(s) 1639, 2140
BspDI ATCGAT 1 cut(s) 1292
BspFNI CGCG 1 cut(s) 645
BspHI TCATGA 2 cut(s) 1680, 1899
BspLI GGNNCC 7 cut(s) 598, 1009, 1393, 1502, 1503, 1665, 1864
BspPI GGATC 7 cut(s) 21, 152, 1297, 1386, 1399, 1658, 1671
BspQI GCTCTTC 1 cut(s) 1746
BspT107I GGYRCC 1 cut(s) 596
BsrBI CCGCTC 1 cut(s) 1163
BsrDI GCAATG 2 cut(s) 69, 216
BsrFI RCCGGY 1 cut(s) 1184
BsrGI TGTACA 1 cut(s) 1692
BsrI ACTGG 3 cut(s) 458, 901, 984
BssAI RCCGGY 1 cut(s) 1184
BssECI CCNNGG 6 cut(s) 175, 236, 320, 934, 1475, 1504
BssNI GRCGYC 1 cut(s) 1937
BssT1I CCWWGG 2 cut(s) 320, 934
Bst4CI ACNGT 1 cut(s) 809
Bst6I CTCTTC 1 cut(s) 1746
BstACI GRCGYC 1 cut(s) 1937
BstAUI TGTACA 1 cut(s) 1692
BstC8I GCNNGC 1 cut(s) 1089
BstDEI CTNAG 3 cut(s) 1166, 1647, 2127
BstDSI CCRYGG 1 cut(s) 934
BstENI CCTNNNNNAGG 1 cut(s) 2151
BstF5I GGATG 5 cut(s) 348, 463, 944, 978, 1028
BstFNI CGCG 1 cut(s) 645
BstHHI GCGC 1 cut(s) 1990
BstMAI GTCTC 2 cut(s) 101, 367
BstMCI CGRYCG 3 cut(s) 649, 808, 1636
BstMWI GCNNNNNNNGC 1 cut(s) 331
BstNSI RCATGY 1 cut(s) 2204
BstSFI CTRYAG 2 cut(s) 948, 1483
BstSLI GKGCMC 1 cut(s) 601
BstUI CGCG 1 cut(s) 645
BstV1I GCAGC 3 cut(s) 71, 601, 1360
BstV2I GAAGAC 2 cut(s) 128, 549
BstX2I RGATCY 4 cut(s) 157, 518, 1391, 1663
BstXI CCANNNNNNTGG 1 cut(s) 593
BstYI RGATCY 4 cut(s) 157, 518, 1391, 1663
Bsu15I ATCGAT 1 cut(s) 1292
BsuI GTATCC 2 cut(s) 1409, 1637
BsuRI GGCC 6 cut(s) 345, 697, 872, 1023, 1138, 1240
BsuTUI ATCGAT 1 cut(s) 1292
BtgI CCRYGG 1 cut(s) 934
BtsCI GGATG 5 cut(s) 348, 463, 944, 978, 1028
BtsIMutI CAGTG 1 cut(s) 991
Cac8I GCNNGC 1 cut(s) 1089
CciI TCATGA 2 cut(s) 1680, 1899
CfoI GCGC 1 cut(s) 1990
Cfr10I RCCGGY 1 cut(s) 1184
Cfr13I GGNCC 8 cut(s) 931, 1007, 1021, 1040, 1136, 1501, 1604, 2186
ClaI ATCGAT 1 cut(s) 1292
CseI GACGC 3 cut(s) 37, 651, 1926
CspAI ACCGGT 1 cut(s) 1184
DdeI CTNAG 3 cut(s) 1166, 1647, 2127
DraI TTTAAA 2 cut(s) 877, 1885
DraIII CACNNNGTG 1 cut(s) 986
EaeI YGGCCR 2 cut(s) 695, 1238
Eam1104I CTCTTC 1 cut(s) 1746
EarI CTCTTC 1 cut(s) 1746
EciI GGCGGA 2 cut(s) 26, 283
Eco130I CCWWGG 2 cut(s) 320, 934
Eco147I AGGCCT 1 cut(s) 872
Eco47I GGWCC 6 cut(s) 931, 1007, 1040, 1501, 1604, 2186
Eco57I CTGAAG 5 cut(s) 624, 858, 1260, 1935, 2053
EcoNI CCTNNNNNAGG 1 cut(s) 2151
EcoO109I RGGNCCY 3 cut(s) 1021, 1501, 2186
EcoRI GAATTC 1 cut(s) 2046
EcoT14I CCWWGG 2 cut(s) 320, 934
ErhI CCWWGG 2 cut(s) 320, 934
Esp3I CGTCTC 1 cut(s) 101
FaqI GGGAC 4 cut(s) 64, 354, 1487, 2036
FauI CCCGC 1 cut(s) 1084
FauNDI CATATG 1 cut(s) 1360
FbaI TGATCA 2 cut(s) 712, 975
FblI GTMKAC 1 cut(s) 1303
Fnu4HI GCNGC 4 cut(s) 60, 590, 1374, 1644
FokI GGATG 5 cut(s) 335, 470, 951, 985, 1015
Fsp4HI GCNGC 4 cut(s) 60, 590, 1374, 1644
FspBI CTAG 7 cut(s) 162, 201, 222, 321, 522, 777, 2180
GlaI GCGC 1 cut(s) 1989
GluI GCNGC 4 cut(s) 60, 590, 1374, 1644
GsaI CCCAGC 3 cut(s) 375, 589, 1083
GsuI CTGGAG 1 cut(s) 1401
HaeIII GGCC 6 cut(s) 345, 697, 872, 1023, 1138, 1240
HapII CCGG 6 cut(s) 208, 476, 698, 1185, 1661, 1978
HgaI GACGC 3 cut(s) 37, 651, 1926
HhaI GCGC 1 cut(s) 1990
Hin1I GRCGYC 1 cut(s) 1937
Hin6I GCGC 1 cut(s) 1988
HinP1I GCGC 1 cut(s) 1988
HincII GTYRAC 1 cut(s) 1304
HindII GTYRAC 1 cut(s) 1304
HindIII AAGCTT 1 cut(s) 734
HinfI GANTC 5 cut(s) 316, 966, 1429, 1903, 2157
HpaII CCGG 6 cut(s) 208, 476, 698, 1185, 1661, 1978
HphI GGTGA 3 cut(s) 104, 295, 1124
Hpy166II GTNNAC 4 cut(s) 730, 812, 1190, 1304
Hpy188I TCNGA 9 cut(s) 21, 153, 192, 297, 772, 1279, 1348, 1711, 1954
Hpy8I GTNNAC 4 cut(s) 730, 812, 1190, 1304
Hpy99I CGWCG 3 cut(s) 21, 645, 2008
HpyAV CCTTC 8 cut(s) 683, 1201, 1277, 1281, 1349, 2096, 2177, 2199
HpyCH4III ACNGT 1 cut(s) 809
HpyCH4IV ACGT 2 cut(s) 1744, 2079
HpyCH4V TGCA 4 cut(s) 281, 1358, 1376, 2204
HpyF10VI GCNNNNNNNGC 1 cut(s) 331
HpyF3I CTNAG 3 cut(s) 1166, 1647, 2127
HpySE526I ACGT 2 cut(s) 1744, 2079
Hsp92I GRCGYC 1 cut(s) 1937
HspAI GCGC 1 cut(s) 1988
KflI GGGWCCC 1 cut(s) 1501
Ksp22I TGATCA 2 cut(s) 712, 975
LguI GCTCTTC 1 cut(s) 1746
LmnI GCTCC 3 cut(s) 21, 1210, 2141
Lsp1109I GCAGC 3 cut(s) 71, 601, 1360
LweI GCATC 1 cut(s) 1192
MaeI CTAG 7 cut(s) 162, 201, 222, 321, 522, 777, 2180
MaeII ACGT 2 cut(s) 1744, 2079
MaeIII GTNAC 3 cut(s) 250, 301, 1828
MbiI CCGCTC 1 cut(s) 1163
MboII GAAGA 8 cut(s) 133, 554, 718, 1235, 1266, 1763, 1941, 2059
MflI RGATCY 4 cut(s) 157, 518, 1391, 1663
MhlI GDGCHC 2 cut(s) 601, 2146
MlsI TGGCCA 1 cut(s) 1240
MluNI TGGCCA 1 cut(s) 1240
MlyI GAGTC 3 cut(s) 310, 1912, 2166
MmeI TCCRAC 5 cut(s) 367, 376, 1067, 1495, 1697
Mox20I TGGCCA 1 cut(s) 1240
MscI TGGCCA 1 cut(s) 1240
Msp20I TGGCCA 1 cut(s) 1240
MspA1I CMGCKG 3 cut(s) 375, 1004, 1646
MspI CCGG 6 cut(s) 208, 476, 698, 1185, 1661, 1978
MvnI CGCG 1 cut(s) 645
MwoI GCNNNNNNNGC 1 cut(s) 331
NciI CCSGG 1 cut(s) 477
NcoI CCATGG 1 cut(s) 934
NdeI CATATG 1 cut(s) 1360
NlaIV GGNNCC 7 cut(s) 598, 1009, 1393, 1502, 1503, 1665, 1864
NmuCI GTSAC 2 cut(s) 301, 1828
NspI RCATGY 1 cut(s) 2204
PagI TCATGA 2 cut(s) 1680, 1899
PceI AGGCCT 1 cut(s) 872
PciSI GCTCTTC 1 cut(s) 1746
PcsI WCGNNNNNNNCGW 2 cut(s) 116, 1629
PfeI GAWTC 2 cut(s) 966, 1429
PflFI GACNNNGTC 1 cut(s) 645
PflMI CCANNNNNTGG 2 cut(s) 961, 1601
PinAI ACCGGT 1 cut(s) 1184
PkrI GCNGC 4 cut(s) 61, 591, 1375, 1645
Ple19I CGATCG 1 cut(s) 1636
PleI GAGTC 3 cut(s) 310, 1911, 2165
PpsI GAGTC 3 cut(s) 310, 1911, 2165
PpuMI RGGWCCY 2 cut(s) 1501, 2186
PshBI ATTAAT 1 cut(s) 1794
Psp1406I AACGTT 1 cut(s) 1744
Psp5II RGGWCCY 2 cut(s) 1501, 2186
PspFI CCCAGC 3 cut(s) 371, 585, 1079
PspN4I GGNNCC 7 cut(s) 598, 1009, 1393, 1502, 1503, 1665, 1864
PspPI GGNCC 8 cut(s) 931, 1007, 1021, 1040, 1136, 1501, 1604, 2186
PspPPI RGGWCCY 2 cut(s) 1501, 2186
PsrI GAACNNNNNNTAC 2 cut(s) 1676, 1708
PsuI RGATCY 4 cut(s) 157, 518, 1391, 1663
PsyI GACNNNGTC 1 cut(s) 645
PvuI CGATCG 1 cut(s) 1636
SalI GTCGAC 1 cut(s) 1302
SapI GCTCTTC 1 cut(s) 1746
SatI GCNGC 4 cut(s) 60, 590, 1374, 1644
Sau96I GGNCC 8 cut(s) 931, 1007, 1021, 1040, 1136, 1501, 1604, 2186
ScaI AGTACT 2 cut(s) 905, 1069
SchI GAGTC 3 cut(s) 310, 1912, 2166
SduI GDGCHC 2 cut(s) 601, 2146
SfaNI GCATC 1 cut(s) 1192
SfcI CTRYAG 2 cut(s) 948, 1483
SinI GGWCC 6 cut(s) 931, 1007, 1040, 1501, 1604, 2186
SseBI AGGCCT 1 cut(s) 872
SsiI CCGC 9 cut(s) 11, 268, 375, 645, 1002, 1091, 1161, 1644, 1941
SspI AATATT 1 cut(s) 1840
SspMI CTAG 7 cut(s) 162, 201, 222, 321, 522, 777, 2180
StuI AGGCCT 1 cut(s) 872
StyI CCWWGG 2 cut(s) 320, 934
TaaI ACNGT 1 cut(s) 809
TaiI ACGT 2 cut(s) 1747, 2082
TatI WGTACW 4 cut(s) 903, 1067, 1312, 1692
TauI GCSGC 1 cut(s) 1646
TfiI GAWTC 2 cut(s) 966, 1429
TscAI CASTG 1 cut(s) 991
TseFI GTSAC 2 cut(s) 301, 1828
TseI GCWGC 3 cut(s) 59, 589, 1373
Tsp45I GTSAC 2 cut(s) 301, 1828
TspDTI ATGAA 9 cut(s) 197, 778, 1005, 1028, 1343, 1697, 1764, 2039, 2115
TspGWI ACGGA 2 cut(s) 554, 836
TspRI CASTG 1 cut(s) 991
Tth111I GACNNNGTC 1 cut(s) 645
Van91I CCANNNNNTGG 2 cut(s) 961, 1601
VpaK11BI GGWCC 6 cut(s) 931, 1007, 1040, 1501, 1604, 2186
VspI ATTAAT 1 cut(s) 1794
XagI CCTNNNNNAGG 1 cut(s) 2151
XapI RAATTY 5 cut(s) 555, 749, 992, 1875, 2046
XbaI TCTAGA 1 cut(s) 521
XceI RCATGY 1 cut(s) 2204
XmaJI CCTAGG 1 cut(s) 320
XmiI GTMKAC 1 cut(s) 1303
XspI CTAG 7 cut(s) 162, 201, 222, 321, 522, 777, 2180
ZrmI AGTACT 2 cut(s) 905, 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.