pycom01g07080

Rhamnogalacturonate lyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0000523
Physical Location & Seq
Reverse (-)
7667150 .. 7671221
4072 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g07080.8

Sequence Viewer

Length: 1224 bp
ATGCTCGCTTTGCTCTTCTTCTTGCCTGATGATGGTAACTTCGCGAAGATTTCCGTAAGAAGAGCACTAAGGAGCGTTACTGGATCAAATAATGGGCTCGACCAGATGCTAATAAAGACTAAAAACCAGGTGGTAATGAATAATGGCATTGTCCGGCTTACGTTTTCTTATCCCGGAGGAGACGTCATCGGAATCAAGTACAAGGGAATCGACAACTTACTTGAAATCAAGAATCAGGAAAATAATAGAGGCTATTGGGATGTTGTCTGGAATAACAAAGAGACAGGAGGTATCGACAAACTACAAGGGGGGAGATTTAAAATTATTACTGCGAGAGCAGATCAAACAGAAATTTCTTTTACCAAAAAATACGATATTTCTCGAGGAAATGCAACACTTTCCATGAATGTTGACAAAAGGTACATAATGCAGCGTGGTCGCGCCGGGTTCTATGCATATTCCATATTTGAGCGTCCCAAAGGGTGGCCGGGTTTGGACATCGATCAAATTAGAATTGTGTACAAACTTCAACAAGACAAATTTCAATTCATGGCTGTGTCTGACGATAGACAAAGGGTCATGCCAACAGCCGATGACCGTTCAAACGGTATTAAACTTGCCTATCCTGAAGCTGTTCTTTTGACCAATCCAAGCAATCCTGACCTCAGAGGAGAGGTGGACGACAAGTACCAATACTCAAGTGAGGACAAAGATAACAAGGTCCATGGATGGATTTGCACTAAGCCAGCCGTAGGCTTCTGGATCATCACACCTAGTGATGAGTTTCGCACAGCTGGGCCCTTCAAGCAGGACCTCACCTCTCATGTAGGCCCAACCGCCCTCTCAATGTTTGTTAGTACTCACTATGCTGGGAAGGAGGTTGGAATGAGATTTGCAAGTGGTGAGGCATGGAAGAAAGTGTTTGGGCCTGTCTTTGTGTATCTCAATTCGGTTCCAAGTTTAAATGAGTCCGCTCTTTGGGAAAACGCTAAAGAGCAGTTGGTTGAAGAAGTCAAGAGCTGGCCATACAGTTTCACTCAATCAGAAGACATTCCTAGCTCAAGCGGACGCGGATCAGTTGCCGGTCAATTACTAGTACGGGATCGGTACACCAGCAAGAGCCTTGTTTGGGCAAGTTCTGCGTATGTAGGATTGGCTGCACCTGGAAAAGCGGGATCGATGGCAAAAGGAAAGCAAGGGTTATCAATTCTGGACTCAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

408

Amino Acids

45.39

Weight (kDa)

9.21

Isoelectric Point (pI)

28.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000523)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65210 AT2G22620 AT2G22620 AT2G22620 AT2G22620 AT2G22620 AT4G37950 AT4G37950 AT4G38030
fragaria_vesca FvH4_1g03290 FvH4_1g03300 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19194 FvH4_1g19200
malus_domestica MD01G1043200.v1.1 MD01G1043300.v1.1 MD02G1298500.v1.1 MD02G1307100.v1.1 MD04G1240500.v1.1 MD12G1256900.v1.1 MD12G1257400.v1.1 MD12G1257500.v1.1 MD15G1308100.v1.1 MD15G1308200.v1.1
prunus_persica Prupe.6G208400_v2.0.a1 Prupe.6G208400_v2.0.a1 Prupe.6G208400_v2.0.a1
pyrus_communis pycom01g07080 pycom15g27240
rosa_chinensis RchiOBHm_Chr2g0088421 RchiOBHm_Chr2g0088461 RchiOBHm_Chr2g0088481 RchiOBHm_Chr2g0110401 RchiOBHm_Chr2g0110411 RchiOBHm_Chr2g0110431
rosa_laevigata RLG00000003093 RLG00000015953 RLG00000015956 RLG00000015959 RLG00000017802 RLG00000017806
rosa_multiflora Rmu_sc0001393.1_g000003 Rmu_sc0001393.1_g000009 Rmu_sc0004733.1_g000013 Rmu_sc0004733.1_g000022
rosa_roxburghii Rroxscaffold_2G00133400 Rroxscaffold_2G00133420 Rroxscaffold_2G00152640 Rroxscaffold_2G00152680
rosa_rugosa Rorug01G0484000 Rorug01G0484200 Rorug01G0484600 Rorug02G0166800 Rorug02G0166900 Rorug02G0167000 Rorug02G0167500 Rorug02G0167600 Rorug02G0167800 Rorug02G0167800 Rorug07G0116100
rosa_samantha Rh2AG038500 Rh2AG038800 Rh2AG039000 Rh2AG219300 Rh2AG219400 Rh2BG038100 Rh2BG038400 Rh2BG228800 Rh2BG229000 Rh2CG039000 Rh2CG039600 Rh2CG221000 Rh2CG221200 Rh2DG038600 Rh2DG038800 Rh2DG225500 Rh2DG225600
rosa_wichuraiana Rw2G003060 Rw2G003080 Rw2G016930 Rw2G016940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 186
AccB7I CCANNNNNTGG 1 cut(s) 483
AccBSI CCGCTC 1 cut(s) 974
AccII CGCG 3 cut(s) 44, 441, 1071
AciI CCGC 5 cut(s) 837, 972, 1065, 1071, 1172
AclWI GGATC 5 cut(s) 91, 770, 1081, 1110, 1183
AcoI YGGCCR 2 cut(s) 485, 1022
AcsI RAATTY 2 cut(s) 351, 539
AcuI CTGAAG 1 cut(s) 648
AcyI GRCGYC 1 cut(s) 183
AdeI CACNNNGTG 1 cut(s) 776
AfaI GTAC 7 cut(s) 200, 422, 521, 689, 859, 1098, 1109
AfiI CCNNNNNNNGG 5 cut(s) 32, 483, 752, 978, 1129
AgsI TTSAA 6 cut(s) 224, 530, 545, 603, 805, 1007
AhdI GACNNNNNGTC 1 cut(s) 575
AhlI ACTAGT 1 cut(s) 1093
AjnI CCWGG 2 cut(s) 126, 1162
AluBI AGCT 5 cut(s) 632, 794, 1020, 1059, 1221
AluI AGCT 5 cut(s) 632, 794, 1020, 1059, 1221
Alw21I GWGCWC 1 cut(s) 67
Alw26I GTCTC 2 cut(s) 174, 275
AlwI GGATC 5 cut(s) 91, 770, 1081, 1110, 1183
Ama87I CYCGRG 1 cut(s) 381
AoxI GGCC 5 cut(s) 485, 797, 829, 926, 1022
ApaI GGGCCC 1 cut(s) 801
ApeKI GCWGC 2 cut(s) 430, 1157
ApoI RAATTY 2 cut(s) 351, 539
Asp700I GAANNNNTTC 2 cut(s) 633, 1050
AspLEI GCGC 1 cut(s) 443
AspS9I GGNCC 6 cut(s) 721, 797, 798, 811, 830, 926
AsuC2I CCSGG 3 cut(s) 174, 445, 489
AsuHPI GGTGA 2 cut(s) 808, 914
AvaI CYCGRG 1 cut(s) 381
AvaII GGWCC 2 cut(s) 721, 811
BaeGI GKGCMC 1 cut(s) 801
BalI TGGCCA 1 cut(s) 1024
BanII GRGCYC 2 cut(s) 99, 801
BbsI GAAGAC 1 cut(s) 1053
Bbv12I GWGCWC 1 cut(s) 67
BbvI GCAGC 2 cut(s) 442, 1144
BccI CCATC 3 cut(s) 26, 723, 1174
BceAI ACGGC 1 cut(s) 734
BcgI CGANNNNNNTGC 2 cut(s) 419, 453
BciT130I CCWGG 2 cut(s) 128, 1164
BcnI CCSGG 3 cut(s) 174, 445, 489
BcoDI GTCTC 2 cut(s) 174, 275
BcuI ACTAGT 1 cut(s) 1093
BfaI CTAG 3 cut(s) 774, 1056, 1094
BisI GCNGC 2 cut(s) 431, 1158
BlsI GCNGC 2 cut(s) 432, 1159
BmcAI AGTACT 1 cut(s) 859
Bme1390I CCNGG 5 cut(s) 128, 174, 445, 489, 1164
Bme18I GGWCC 2 cut(s) 721, 811
BmeRI GACNNNNNGTC 1 cut(s) 575
BmeT110I CYCGRG 1 cut(s) 381
BmgT120I GGNCC 6 cut(s) 721, 797, 798, 811, 830, 926
BmiI GGNNCC 2 cut(s) 799, 954
BmrFI CCNGG 5 cut(s) 128, 174, 445, 489, 1164
BmsI GCATC 1 cut(s) 96
BpiI GAAGAC 1 cut(s) 1053
BpuEI CTTGAG 3 cut(s) 682, 1045, 1201
BpuMI CCSGG 3 cut(s) 174, 445, 489
Bsa29I ATCGAT 2 cut(s) 501, 1178
BsaHI GRCGYC 1 cut(s) 183
BsaJI CCNNGG 1 cut(s) 724
BsaXI ACNNNNNCTCC 2 cut(s) 168, 198
Bsc4I CCNNNNNNNGG 5 cut(s) 32, 483, 752, 978, 1129
Bse118I RCCGGY 1 cut(s) 1082
Bse1I ACTGG 1 cut(s) 85
BseBI CCWGG 2 cut(s) 128, 1164
BseCI ATCGAT 2 cut(s) 501, 1178
BseDI CCNNGG 1 cut(s) 724
BseGI GGATG 2 cut(s) 265, 734
BseLI CCNNNNNNNGG 5 cut(s) 32, 483, 752, 978, 1129
BseMII CTCAG 1 cut(s) 679
BseNI ACTGG 1 cut(s) 85
BseRI GAGGAG 2 cut(s) 192, 684
BseSI GKGCMC 1 cut(s) 801
BseXI GCAGC 2 cut(s) 442, 1144
BseYI CCCAGC 2 cut(s) 794, 869
BsgI GTGCAG 1 cut(s) 1143
Bsh1236I CGCG 3 cut(s) 44, 441, 1071
BshFI GGCC 5 cut(s) 487, 799, 831, 928, 1024
BshVI ATCGAT 2 cut(s) 501, 1178
BsiHKAI GWGCWC 1 cut(s) 67
BsiHKCI CYCGRG 1 cut(s) 381
BsiSI CCGG 5 cut(s) 154, 174, 444, 488, 1083
BslFI GGGAC 1 cut(s) 459
BslI CCNNNNNNNGG 5 cut(s) 32, 483, 752, 978, 1129
BsmAI GTCTC 2 cut(s) 174, 275
BsmBI CGTCTC 1 cut(s) 174
BsmFI GGGAC 1 cut(s) 459
BsnI GGCC 5 cut(s) 487, 799, 831, 928, 1024
BsoBI CYCGRG 1 cut(s) 381
Bsp120I GGGCCC 1 cut(s) 797
Bsp1286I GDGCHC 3 cut(s) 67, 99, 801
Bsp1407I TGTACA 1 cut(s) 519
Bsp143I GATC 7 cut(s) 83, 340, 502, 762, 1073, 1102, 1175
Bsp19I CCATGG 1 cut(s) 724
Bsp68I TCGCGA 1 cut(s) 44
BspACI CCGC 5 cut(s) 837, 972, 1065, 1071, 1172
BspANI GGCC 5 cut(s) 487, 799, 831, 928, 1024
BspCNI CTCAG 1 cut(s) 678
BspDI ATCGAT 2 cut(s) 501, 1178
BspFNI CGCG 3 cut(s) 44, 441, 1071
BspLI GGNNCC 2 cut(s) 799, 954
BspPI GGATC 5 cut(s) 91, 770, 1081, 1110, 1183
BspQI GCTCTTC 2 cut(s) 20, 55
BsrBI CCGCTC 1 cut(s) 974
BsrFI RCCGGY 1 cut(s) 1082
BsrGI TGTACA 1 cut(s) 519
BsrI ACTGG 1 cut(s) 85
BssAI RCCGGY 1 cut(s) 1082
BssECI CCNNGG 1 cut(s) 724
BssMI GATC 7 cut(s) 83, 340, 502, 762, 1073, 1102, 1175
BssNI GRCGYC 1 cut(s) 183
BssT1I CCWWGG 1 cut(s) 724
Bst2UI CCWGG 2 cut(s) 128, 1164
Bst4CI ACNGT 3 cut(s) 599, 608, 1031
Bst6I CTCTTC 2 cut(s) 20, 55
BstACI GRCGYC 1 cut(s) 183
BstAPI GCANNNNNTGC 1 cut(s) 1139
BstAUI TGTACA 1 cut(s) 519
BstC8I GCNNGC 3 cut(s) 6, 747, 1022
BstDEI CTNAG 3 cut(s) 68, 665, 741
BstDSI CCRYGG 1 cut(s) 724
BstF5I GGATG 2 cut(s) 265, 734
BstFNI CGCG 3 cut(s) 44, 441, 1071
BstHHI GCGC 1 cut(s) 443
BstKTI GATC 7 cut(s) 86, 343, 505, 765, 1076, 1105, 1178
BstMAI GTCTC 2 cut(s) 174, 275
BstMBI GATC 7 cut(s) 83, 340, 502, 762, 1073, 1102, 1175
BstMWI GCNNNNNNNGC 3 cut(s) 10, 805, 1139
BstNI CCWGG 2 cut(s) 128, 1164
BstSCI CCNGG 5 cut(s) 126, 172, 443, 487, 1162
BstSLI GKGCMC 1 cut(s) 801
BstUI CGCG 3 cut(s) 44, 441, 1071
BstV1I GCAGC 2 cut(s) 442, 1144
BstV2I GAAGAC 1 cut(s) 1053
Bsu15I ATCGAT 2 cut(s) 501, 1178
BsuRI GGCC 5 cut(s) 487, 799, 831, 928, 1024
BsuTUI ATCGAT 2 cut(s) 501, 1178
BtgI CCRYGG 1 cut(s) 724
BtsCI GGATG 2 cut(s) 265, 734
BtuMI TCGCGA 1 cut(s) 44
Cac8I GCNNGC 3 cut(s) 6, 747, 1022
CfoI GCGC 1 cut(s) 443
Cfr10I RCCGGY 1 cut(s) 1082
Cfr13I GGNCC 6 cut(s) 721, 797, 798, 811, 830, 926
ClaI ATCGAT 2 cut(s) 501, 1178
CseI GACGC 2 cut(s) 461, 1077
CsiI ACCWGGT 1 cut(s) 126
Csp6I GTAC 7 cut(s) 199, 421, 520, 688, 858, 1097, 1108
CviAII CATG 6 cut(s) 403, 550, 580, 725, 824, 909
CviQI GTAC 7 cut(s) 199, 421, 520, 688, 858, 1097, 1108
DdeI CTNAG 3 cut(s) 68, 665, 741
DpnI GATC 7 cut(s) 85, 342, 504, 764, 1075, 1104, 1177
DpnII GATC 7 cut(s) 83, 340, 502, 762, 1073, 1102, 1175
DraI TTTAAA 2 cut(s) 319, 963
DraIII CACNNNGTG 1 cut(s) 776
DriI GACNNNNNGTC 1 cut(s) 575
EaeI YGGCCR 2 cut(s) 485, 1022
Eam1104I CTCTTC 2 cut(s) 20, 55
Eam1105I GACNNNNNGTC 1 cut(s) 575
EarI CTCTTC 2 cut(s) 20, 55
Eco130I CCWWGG 1 cut(s) 724
Eco24I GRGCYC 2 cut(s) 99, 801
Eco47I GGWCC 2 cut(s) 721, 811
Eco57I CTGAAG 1 cut(s) 648
Eco88I CYCGRG 1 cut(s) 381
EcoO109I RGGNCCY 2 cut(s) 798, 811
EcoRII CCWGG 2 cut(s) 126, 1162
EcoT14I CCWWGG 1 cut(s) 724
EcoT22I ATGCAT 1 cut(s) 457
EcoT38I GRGCYC 2 cut(s) 99, 801
ErhI CCWWGG 1 cut(s) 724
Esp3I CGTCTC 1 cut(s) 174
FaeI CATG 6 cut(s) 406, 553, 583, 728, 827, 912
FalI AAGNNNNNCTT 2 cut(s) 621, 653
FaqI GGGAC 1 cut(s) 459
FatI CATG 6 cut(s) 402, 549, 579, 724, 823, 908
FauI CCCGC 1 cut(s) 1165
Fnu4HI GCNGC 2 cut(s) 431, 1158
FokI GGATG 2 cut(s) 272, 741
FriOI GRGCYC 2 cut(s) 99, 801
Fsp4HI GCNGC 2 cut(s) 431, 1158
FspBI CTAG 3 cut(s) 774, 1056, 1094
GlaI GCGC 1 cut(s) 442
GluI GCNGC 2 cut(s) 431, 1158
GsaI CCCAGC 2 cut(s) 798, 873
HaeIII GGCC 5 cut(s) 487, 799, 831, 928, 1024
HapII CCGG 5 cut(s) 154, 174, 444, 488, 1083
HgaI GACGC 2 cut(s) 461, 1077
HhaI GCGC 1 cut(s) 443
Hin1I GRCGYC 1 cut(s) 183
Hin1II CATG 6 cut(s) 406, 553, 583, 728, 827, 912
Hin6I GCGC 1 cut(s) 441
HinP1I GCGC 1 cut(s) 441
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HinfI GANTC 5 cut(s) 192, 207, 232, 968, 1214
HpaII CCGG 5 cut(s) 154, 174, 444, 488, 1083
HphI GGTGA 2 cut(s) 808, 914
Hpy166II GTNNAC 4 cut(s) 412, 520, 679, 1110
Hpy188I TCNGA 4 cut(s) 191, 562, 668, 1045
Hpy8I GTNNAC 4 cut(s) 412, 520, 679, 1110
HpyAV CCTTC 2 cut(s) 811, 868
HpyCH4III ACNGT 3 cut(s) 599, 608, 1031
HpyCH4IV ACGT 2 cut(s) 161, 183
HpyCH4V TGCA 6 cut(s) 392, 430, 455, 738, 896, 1160
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 805, 1139
HpyF3I CTNAG 3 cut(s) 68, 665, 741
HpySE526I ACGT 2 cut(s) 161, 183
Hsp92I GRCGYC 1 cut(s) 183
Hsp92II CATG 6 cut(s) 406, 553, 583, 728, 827, 912
HspAI GCGC 1 cut(s) 441
Kzo9I GATC 7 cut(s) 83, 340, 502, 762, 1073, 1102, 1175
LguI GCTCTTC 2 cut(s) 20, 55
LmnI GCTCC 1 cut(s) 72
Lsp1109I GCAGC 2 cut(s) 442, 1144
LweI GCATC 1 cut(s) 96
MabI ACCWGGT 1 cut(s) 126
MaeI CTAG 3 cut(s) 774, 1056, 1094
MaeII ACGT 2 cut(s) 161, 183
MaeIII GTNAC 2 cut(s) 35, 76
MalI GATC 7 cut(s) 85, 342, 504, 764, 1075, 1104, 1177
MbiI CCGCTC 1 cut(s) 974
MboI GATC 7 cut(s) 83, 340, 502, 762, 1073, 1102, 1175
MboII GAAGA 7 cut(s) 7, 10, 58, 72, 925, 1019, 1058
MhlI GDGCHC 3 cut(s) 67, 99, 801
MlsI TGGCCA 1 cut(s) 1024
MluCI AATT 9 cut(s) 321, 351, 507, 513, 539, 545, 946, 1088, 1206
MluNI TGGCCA 1 cut(s) 1024
MlyI GAGTC 2 cut(s) 977, 1208
MmeI TCCRAC 1 cut(s) 862
Mox20I TGGCCA 1 cut(s) 1024
Mph1103I ATGCAT 1 cut(s) 457
MroXI GAANNNNTTC 2 cut(s) 633, 1050
MscI TGGCCA 1 cut(s) 1024
MseI TTAA 3 cut(s) 318, 612, 962
MslI CAYNNNNRTG 1 cut(s) 554
Msp20I TGGCCA 1 cut(s) 1024
MspA1I CMGCKG 1 cut(s) 794
MspI CCGG 5 cut(s) 154, 174, 444, 488, 1083
MspR9I CCNGG 5 cut(s) 128, 174, 445, 489, 1164
MvaI CCWGG 2 cut(s) 128, 1164
MvnI CGCG 3 cut(s) 44, 441, 1071
MwoI GCNNNNNNNGC 3 cut(s) 10, 805, 1139
NciI CCSGG 3 cut(s) 174, 445, 489
NcoI CCATGG 1 cut(s) 724
NdeII GATC 7 cut(s) 83, 340, 502, 762, 1073, 1102, 1175
NlaIII CATG 6 cut(s) 406, 553, 583, 728, 827, 912
NlaIV GGNNCC 2 cut(s) 799, 954
NruI TCGCGA 1 cut(s) 44
NsiI ATGCAT 1 cut(s) 457
PaeR7I CTCGAG 1 cut(s) 381
PciSI GCTCTTC 2 cut(s) 20, 55
PdmI GAANNNNTTC 2 cut(s) 633, 1050
PfeI GAWTC 3 cut(s) 192, 207, 232
PflMI CCANNNNNTGG 1 cut(s) 483
PfoI TCCNGGA 1 cut(s) 172
PkrI GCNGC 2 cut(s) 432, 1159
PleI GAGTC 2 cut(s) 976, 1208
PpsI GAGTC 2 cut(s) 976, 1208
PpuMI RGGWCCY 1 cut(s) 811
Psp5II RGGWCCY 1 cut(s) 811
Psp6I CCWGG 2 cut(s) 126, 1162
PspFI CCCAGC 2 cut(s) 794, 869
PspGI CCWGG 2 cut(s) 126, 1162
PspN4I GGNNCC 2 cut(s) 799, 954
PspOMI GGGCCC 1 cut(s) 797
PspPI GGNCC 6 cut(s) 721, 797, 798, 811, 830, 926
PspPPI RGGWCCY 1 cut(s) 811
PvuII CAGCTG 1 cut(s) 794
RruI TCGCGA 1 cut(s) 44
RsaI GTAC 7 cut(s) 200, 422, 521, 689, 859, 1098, 1109
RsaNI GTAC 7 cut(s) 199, 421, 520, 688, 858, 1097, 1108
RseI CAYNNNNRTG 1 cut(s) 554
SapI GCTCTTC 2 cut(s) 20, 55
SaqAI TTAA 3 cut(s) 318, 612, 962
SatI GCNGC 2 cut(s) 431, 1158
Sau3AI GATC 7 cut(s) 83, 340, 502, 762, 1073, 1102, 1175
Sau96I GGNCC 6 cut(s) 721, 797, 798, 811, 830, 926
ScaI AGTACT 1 cut(s) 859
SchI GAGTC 2 cut(s) 977, 1208
ScrFI CCNGG 5 cut(s) 128, 174, 445, 489, 1164
SduI GDGCHC 3 cut(s) 67, 99, 801
SexAI ACCWGGT 1 cut(s) 126
SfaNI GCATC 1 cut(s) 96
Sfr274I CTCGAG 1 cut(s) 381
SinI GGWCC 2 cut(s) 721, 811
SlaI CTCGAG 1 cut(s) 381
SmiMI CAYNNNNRTG 1 cut(s) 554
SmlI CTYRAG 4 cut(s) 381, 697, 1060, 1216
SmoI CTYRAG 4 cut(s) 381, 697, 1060, 1216
SpeI ACTAGT 1 cut(s) 1093
Sse9I AATT 9 cut(s) 321, 351, 507, 513, 539, 545, 946, 1088, 1206
SsiI CCGC 5 cut(s) 837, 972, 1065, 1071, 1172
SspMI CTAG 3 cut(s) 774, 1056, 1094
StyD4I CCNGG 5 cut(s) 126, 172, 443, 487, 1162
StyI CCWWGG 1 cut(s) 724
TaaI ACNGT 3 cut(s) 599, 608, 1031
TaiI ACGT 2 cut(s) 164, 186
TaqI TCGA 6 cut(s) 99, 210, 294, 382, 501, 1178
TasI AATT 9 cut(s) 321, 351, 507, 513, 539, 545, 946, 1088, 1206
TatI WGTACW 3 cut(s) 198, 519, 857
TfiI GAWTC 3 cut(s) 192, 207, 232
Tru1I TTAA 3 cut(s) 318, 612, 962
Tru9I TTAA 3 cut(s) 318, 612, 962
TseI GCWGC 2 cut(s) 430, 1157
TspDTI ATGAA 3 cut(s) 152, 419, 538
TspGWI ACGGA 1 cut(s) 43
Van91I CCANNNNNTGG 1 cut(s) 483
VpaK11BI GGWCC 2 cut(s) 721, 811
XapI RAATTY 2 cut(s) 351, 539
XhoI CTCGAG 1 cut(s) 381
XmnI GAANNNNTTC 2 cut(s) 633, 1050
XspI CTAG 3 cut(s) 774, 1056, 1094
ZraI GACGTC 1 cut(s) 184
ZrmI AGTACT 1 cut(s) 859
Zsp2I ATGCAT 1 cut(s) 457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.