FvH4_4g07850

Pre-mRNA-splicing factor ATP-dependent RNA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000671
Physical Location & Seq
Reverse (-)
7375851 .. 7381008
5158 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g07850.t2

Sequence Viewer

Length: 1704 bp
ATGAGTTCGGCCAGGCTGACTCAGAAAGATCCGAAATGCCCAGCAGTCTCATTGAAAAGTGCTTTCGAGAAGCTTGCATACCTTTCCCTGGTCTCCAGGATCTGCACAGAGCTTGAAAACTATAATGGGGGTTTTGGAGACAAAGTCGTAACAGAGTTGATAGCTGAGGTGGGGCGAAACTGTGAGGCGGTGGACGAGTTTCGTAAAGTGATGAAGCAAAACGGTGTTGACATGCCTGAAAATGTTATGTCCGTGTTGTTAACGATTGTTCACTCTGTTCTTCATCCTACAAAGGTTTCTCAGAAAAACATAATCCCGGACATGGCGATTAACAATAGCATGGGAAGGCAACGAGACGATAAAAGAGGTAAAGGTGAGCTTAGGAGTAGGAGGAGGCATAGAAATTCACAACAGAATAAAAACTTGCCGATATACAAGTTGAAGAAAGAGCTTATTCAAGCTGTGCATGAAAATCAGGTTCTAGTTGTCATTGGTGAGACTGGTTCGGGCAAGACAACTCAGGTAACACAGTATCTTGCTGAAGCAGGTTACAGTACAAAGGGCAAGATAGGATGTACTCAACCCCGTAGAGTTGCGGTGACATCTGTGGCCATGAGGGTTGCTGAAGAATTTGGTTGTGATCGATTAGGGGAGGAAGTGGGGTATGCTATTCGTTTCGAAGATTGTACTGGACCGGATACTGTGATCAAGTATATGACTGATGGGATGCTTTTTAGGGAGTTTTTGGTTGATAATGATCTTTCTCAGTACTCGGTGATCATGCTTGATGAAGCTCATGAAAGAACAATCTTCACTGATGTCCTCTTTGGATTGCTGAAGCAACTTGTGAAGAGGCGTCCTGATCTTCGCTTGATTGTCACATCTGCCACACTGGATGCTGAGAAGTTCTCGGCTTATTTCTTCGACTGTAAGATATTTACTATTCCTGGTAGAACTTATCCTGTAGAAGTGTTCTACTTGCATCAGCCCGAAAGGGATTATTTGGATTCAGCTCTATTAACTGTTCTGCAGATTCACTTGACAGAACCTGAGGGTGACATACTTCTCTTCTTGACTGGTGAGGAGGAGATTGAATCTGCTTGTCAGTCTCTGAATGAGAGAATGAAAGAGTATGGAAAAAGGGTTCCGGAATTGATCATTCTACCGGCTTATGGTGCCCAACCTAGTGAAGAGCAGGCAAAGATATTTAATCCTACTCCTCCAGGGAAGAGGAAAGTGGTGGTGGCTACCAACATTGCTGAAGCTTCTTTAACCATTGATGGGATATTTCATGTCATTGATTCAGGATATGCAAAGCAAAATGTGTATAATCCGAAGAAAGGGATTGACATGCTGACTGTAGCTCCAATATCACAAGCATCAGCTAAGCAACGAGCAGGGCGTGCTGGGCGGACTGGACCAGGTAACTGTTACCGCCTTTACACTGAGGCTGCATTTAAGAATGAGATGTCTCCTGCTACAGTTCCAGAAATCCAGAGAACAAATCTTGTATATACCACACTTATGATGAAAGCAATGGGGATAAAGGACGTTCTATCTTTCGACTTCATGGATCCACCGCCTTCCCAAGCACTTACTTCTGCTTCAAAACAGCTGCAAAATCTAGGAGCATTGGATGCAGAGGGGTCAGTGACAAAATTGGGGAGTAGAATGGCGGTGTTGCCTCTAGATCCACCTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
DEAD HA2 Helicase_C OB_NTP_bind S1

Protein Analysis

568

Amino Acids

63.08

Weight (kDa)

7.53

Isoelectric Point (pI)

41.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 136 - 287 4.9e-08 DEAD/DEAH box helicase
Helicase_C PF00271 331 - 461 5.1e-12 Helicase conserved C-terminal domain
OB_NTP_bind PF07717 638 - 713 2e-24 Oligonucleotide/oligosaccharide-binding (OB)-fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000671)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G26560
fragaria_vesca FvH4_3g44820 FvH4_4g07500 FvH4_4g07500 FvH4_4g07500 FvH4_4g07850 FvH4_4g07850 FvH4_7g12750
malus_domestica MD09G1231900.v1.1 MD15G1068900.v1.1 MD15G1069000.v1.1 MD16G1254900.v1.1 MD17G1229800.v1.1
prunus_persica Prupe.1G082300_v2.0.a1 Prupe.1G368500_v2.0.a1 Prupe.1G422500_v2.0.a1 Prupe.2G077500_v2.0.a1 Prupe.2G077900_v2.0.a1 Prupe.2G077900_v2.0.a1 Prupe.2G078200_v2.0.a1
pyrus_communis pycom08g06730 pycom09g15120 pycom15g06530 pycom16g21640 pycom17g23220 pycom17g23230 pycom17g23240
rosa_chinensis RchiOBHm_Chr1g0351781 RchiOBHm_Chr4g0400041 RchiOBHm_Chr4g0401121 RchiOBHm_Chr5g0079971 RchiOBHm_Chr5g0081521 RchiOBHm_Chr7g0219091
rosa_laevigata RLG00000009162 RLG00000009217 RLG00000028384 RLG00000036944
rosa_multiflora Rmu_co8434143.1_g000001 Rmu_sc0001909.1_g000017 Rmu_sc0001909.1_g000025 Rmu_sc0001933.1_g000012 Rmu_sc0004005.1_g000001 Rmu_sc0007702.1_g000002 Rmu_sc0010608.1_g000004
rosa_roxburghii Rroxscaffold_1G00002030 Rroxscaffold_4G00303550 Rroxscaffold_5G00345000 Rroxscaffold_5G00345950 Rroxscaffold_5G00345970
rosa_rugosa Rorug01G0221400 Rorug01G0221500 Rorug04G0022300 Rorug04G0022400 Rorug04G0028000 Rorug05G0476900
rosa_samantha Rh1AG235400 Rh1BG205800 Rh1CG220000 Rh1DG232900 Rh2AG475800 Rh2BG083000 Rh2CG085000 Rh4AG097800 Rh4AG105600 Rh4AG109800 Rh4BG095800 Rh4CG107200 Rh4CG114200 Rh4DG092600 Rh4DG097800 Rh5BG553100 Rh5DG563200
rosa_wichuraiana Rw1G020490 Rw4G008160 Rw4G008530 Rw5G049150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 536
AccB1I GGYRCC 1 cut(s) 1175
AccIII TCCGGA 1 cut(s) 1147
AciI CCGC 6 cut(s) 188, 596, 1411, 1435, 1580, 1676
AclWI GGATC 5 cut(s) 23, 107, 1568, 1581, 1685
AcoI YGGCCR 2 cut(s) 9, 609
AcsI RAATTY 2 cut(s) 403, 629
AcuI CTGAAG 4 cut(s) 561, 645, 857, 1281
AcyI GRCGYC 1 cut(s) 856
AfaI GTAC 4 cut(s) 556, 577, 688, 770
AfiI CCNNNNNNNGG 5 cut(s) 88, 322, 1172, 1281, 1340
AgsI TTSAA 6 cut(s) 55, 116, 442, 458, 1094, 1608
AjnI CCWGG 6 cut(s) 11, 87, 95, 946, 1222, 1420
AleI CACNNNNGTG 1 cut(s) 1699
AloI GAACNNNNNNTCC 2 cut(s) 1128, 1160
Alw26I GTCTC 7 cut(s) 52, 97, 132, 348, 491, 1113, 1476
AlwI GGATC 5 cut(s) 23, 107, 1568, 1581, 1685
AlwNI CAGNNNCTG 3 cut(s) 102, 1049, 1111
Aor13HI TCCGGA 1 cut(s) 1147
AoxI GGCC 2 cut(s) 9, 609
ApeKI GCWGC 2 cut(s) 1451, 1615
ApoI RAATTY 2 cut(s) 403, 629
AspS9I GGNCC 2 cut(s) 692, 1418
AsuC2I CCSGG 1 cut(s) 317
AsuHPI GGTGA 6 cut(s) 386, 506, 610, 787, 1067, 1091
AsuII TTCGAA 1 cut(s) 678
AvaII GGWCC 2 cut(s) 692, 1418
AxyI CCTNAGG 1 cut(s) 1050
BaeGI GKGCMC 1 cut(s) 1180
BalI TGGCCA 1 cut(s) 611
BamHI GGATCC 1 cut(s) 1573
BanI GGYRCC 1 cut(s) 1175
BarI GAAGNNNNNNTAC 2 cut(s) 62, 94
BbvCI CCTCAGC 1 cut(s) 165
BbvI GCAGC 2 cut(s) 1438, 1602
BccI CCATC 2 cut(s) 716, 1274
BcgI CGANNNNNNTGC 2 cut(s) 56, 90
BciT130I CCWGG 6 cut(s) 13, 89, 97, 948, 1224, 1422
BciVI GTATCC 1 cut(s) 691
BclI TGATCA 3 cut(s) 705, 777, 1155
BcnI CCSGG 1 cut(s) 317
BcoDI GTCTC 7 cut(s) 52, 97, 132, 348, 491, 1113, 1476
BfaI CTAG 4 cut(s) 482, 1185, 1625, 1688
BfmI CTRYAG 4 cut(s) 963, 1028, 1359, 1479
BfuAI ACCTGC 1 cut(s) 536
BfuI GTATCC 1 cut(s) 691
BisI GCNGC 2 cut(s) 1452, 1616
BlpI GCTNAGC 1 cut(s) 1386
BlsI GCNGC 2 cut(s) 1453, 1617
BmcAI AGTACT 1 cut(s) 770
Bme1390I CCNGG 7 cut(s) 13, 89, 97, 317, 948, 1224, 1422
Bme18I GGWCC 2 cut(s) 692, 1418
BmgT120I GGNCC 2 cut(s) 692, 1418
BmiI GGNNCC 3 cut(s) 1146, 1177, 1575
BmrFI CCNGG 7 cut(s) 13, 89, 97, 317, 948, 1224, 1422
BmsI GCATC 5 cut(s) 717, 886, 991, 1388, 1627
BplI GAGNNNNNCTC 2 cut(s) 893, 925
BpmI CTGGAG 2 cut(s) 79, 1206
Bpu10I CCTNAGC 2 cut(s) 165, 380
Bpu1102I GCTNAGC 1 cut(s) 1386
Bpu14I TTCGAA 1 cut(s) 678
BpuMI CCSGG 1 cut(s) 317
Bsa29I ATCGAT 1 cut(s) 643
BsaBI GATNNNNATC 1 cut(s) 756
BsaHI GRCGYC 1 cut(s) 856
BsaI GGTCTC 1 cut(s) 97
BsaJI CCNNGG 2 cut(s) 87, 1223
BsaWI WCCGGW 2 cut(s) 694, 1147
BsaXI ACNNNNNCTCC 4 cut(s) 129, 159, 1348, 1378
Bsc4I CCNNNNNNNGG 5 cut(s) 88, 322, 1172, 1281, 1340
Bse118I RCCGGY 1 cut(s) 1165
Bse1I ACTGG 5 cut(s) 505, 694, 897, 1081, 1420
Bse21I CCTNAGG 1 cut(s) 1050
Bse3DI GCAATG 2 cut(s) 1254, 1542
Bse8I GATNNNNATC 1 cut(s) 756
BseAI TCCGGA 1 cut(s) 1147
BseBI CCWGG 6 cut(s) 13, 89, 97, 948, 1224, 1422
BseCI ATCGAT 1 cut(s) 643
BseDI CCNNGG 2 cut(s) 87, 1223
BseGI GGATG 5 cut(s) 283, 578, 732, 901, 1642
BseJI GATNNNNATC 1 cut(s) 756
BseLI CCNNNNNNNGG 5 cut(s) 88, 322, 1172, 1281, 1340
BseMI GCAATG 2 cut(s) 1254, 1542
BseMII CTCAG 8 cut(s) 35, 156, 314, 533, 779, 891, 1041, 1437
BseNI ACTGG 5 cut(s) 505, 694, 897, 1081, 1420
BseRI GAGGAG 4 cut(s) 406, 1097, 1100, 1209
BseSI GKGCMC 1 cut(s) 1180
BseXI GCAGC 2 cut(s) 1438, 1602
BseYI CCCAGC 2 cut(s) 40, 1406
BsgI GTGCAG 1 cut(s) 88
BshFI GGCC 2 cut(s) 11, 611
BshNI GGYRCC 1 cut(s) 1175
BshVI ATCGAT 1 cut(s) 643
BsiSI CCGG 4 cut(s) 317, 695, 1148, 1166
BslI CCNNNNNNNGG 5 cut(s) 88, 322, 1172, 1281, 1340
BsmAI GTCTC 7 cut(s) 52, 97, 132, 348, 491, 1113, 1476
BsmBI CGTCTC 1 cut(s) 348
BsnI GGCC 2 cut(s) 11, 611
Bso31I GGTCTC 1 cut(s) 97
Bsp119I TTCGAA 1 cut(s) 678
Bsp1286I GDGCHC 1 cut(s) 1180
Bsp13I TCCGGA 1 cut(s) 1147
Bsp1720I GCTNAGC 1 cut(s) 1386
BspACI CCGC 6 cut(s) 188, 596, 1411, 1435, 1580, 1676
BspANI GGCC 2 cut(s) 11, 611
BspCNI CTCAG 8 cut(s) 34, 157, 313, 532, 778, 892, 1042, 1438
BspDI ATCGAT 1 cut(s) 643
BspEI TCCGGA 1 cut(s) 1147
BspHI TCATGA 1 cut(s) 796
BspLI GGNNCC 3 cut(s) 1146, 1177, 1575
BspMAI CTGCAG 1 cut(s) 1032
BspMI ACCTGC 1 cut(s) 536
BspPI GGATC 5 cut(s) 23, 107, 1568, 1581, 1685
BspQI GCTCTTC 1 cut(s) 1185
BspT104I TTCGAA 1 cut(s) 678
BspT107I GGYRCC 1 cut(s) 1175
BspTNI GGTCTC 1 cut(s) 97
BsrDI GCAATG 2 cut(s) 1254, 1542
BsrFI RCCGGY 1 cut(s) 1165
BsrI ACTGG 5 cut(s) 505, 694, 897, 1081, 1420
BssAI RCCGGY 1 cut(s) 1165
BssECI CCNNGG 2 cut(s) 87, 1223
BssNI GRCGYC 1 cut(s) 856
Bst2UI CCWGG 6 cut(s) 13, 89, 97, 948, 1224, 1422
Bst6I CTCTTC 4 cut(s) 845, 1073, 1185, 1223
BstACI GRCGYC 1 cut(s) 856
BstAPI GCANNNNNTGC 2 cut(s) 1403, 1637
BstBI TTCGAA 1 cut(s) 678
BstC8I GCNNGC 3 cut(s) 75, 1197, 1404
BstF5I GGATG 5 cut(s) 283, 578, 732, 901, 1642
BstMAI GTCTC 7 cut(s) 52, 97, 132, 348, 491, 1113, 1476
BstMWI GCNNNNNNNGC 4 cut(s) 1175, 1403, 1408, 1637
BstNI CCWGG 6 cut(s) 13, 89, 97, 948, 1224, 1422
BstNSI RCATGY 2 cut(s) 235, 1354
BstSCI CCNGG 7 cut(s) 11, 87, 95, 315, 946, 1222, 1420
BstSFI CTRYAG 4 cut(s) 963, 1028, 1359, 1479
BstSLI GKGCMC 1 cut(s) 1180
BstV1I GCAGC 2 cut(s) 1438, 1602
BstX2I RGATCY 4 cut(s) 28, 99, 1573, 1690
BstYI RGATCY 4 cut(s) 28, 99, 1573, 1690
Bsu15I ATCGAT 1 cut(s) 643
Bsu36I CCTNAGG 1 cut(s) 1050
BsuI GTATCC 1 cut(s) 691
BsuRI GGCC 2 cut(s) 11, 611
BsuTUI ATCGAT 1 cut(s) 643
BtsCI GGATG 5 cut(s) 283, 578, 732, 901, 1642
BtsIMutI CAGTG 4 cut(s) 813, 890, 1443, 1656
BveI ACCTGC 1 cut(s) 536
Cac8I GCNNGC 3 cut(s) 75, 1197, 1404
CaiI CAGNNNCTG 3 cut(s) 102, 1049, 1111
CciI TCATGA 1 cut(s) 796
Cfr10I RCCGGY 1 cut(s) 1165
Cfr13I GGNCC 2 cut(s) 692, 1418
ClaI ATCGAT 1 cut(s) 643
CseI GACGC 1 cut(s) 845
CsiI ACCWGGT 1 cut(s) 1420
Csp6I GTAC 4 cut(s) 555, 576, 687, 769
CviQI GTAC 4 cut(s) 555, 576, 687, 769
EaeI YGGCCR 2 cut(s) 9, 609
Eam1104I CTCTTC 4 cut(s) 845, 1073, 1185, 1223
EarI CTCTTC 4 cut(s) 845, 1073, 1185, 1223
EciI GGCGGA 1 cut(s) 1426
Eco31I GGTCTC 1 cut(s) 97
Eco47I GGWCC 2 cut(s) 692, 1418
Eco57I CTGAAG 4 cut(s) 561, 645, 857, 1281
Eco81I CCTNAGG 1 cut(s) 1050
EcoRII CCWGG 6 cut(s) 11, 87, 95, 946, 1222, 1420
Esp3I CGTCTC 1 cut(s) 348
FalI AAGNNNNNCTT 2 cut(s) 363, 395
FbaI TGATCA 3 cut(s) 705, 777, 1155
Fnu4HI GCNGC 2 cut(s) 1452, 1616
FokI GGATG 5 cut(s) 270, 585, 739, 908, 1649
Fsp4HI GCNGC 2 cut(s) 1452, 1616
FspBI CTAG 4 cut(s) 482, 1185, 1625, 1688
GluI GCNGC 2 cut(s) 1452, 1616
GsaI CCCAGC 2 cut(s) 44, 1410
GsuI CTGGAG 2 cut(s) 79, 1206
HaeIII GGCC 2 cut(s) 11, 611
HapII CCGG 4 cut(s) 317, 695, 1148, 1166
HgaI GACGC 1 cut(s) 845
Hin1I GRCGYC 1 cut(s) 856
HincII GTYRAC 2 cut(s) 229, 261
HindII GTYRAC 2 cut(s) 229, 261
HindIII AAGCTT 2 cut(s) 71, 1263
HinfI GANTC 5 cut(s) 19, 1007, 1033, 1094, 1301
HpaI GTTAAC 1 cut(s) 261
HpaII CCGG 4 cut(s) 317, 695, 1148, 1166
HphI GGTGA 6 cut(s) 386, 506, 610, 787, 1067, 1091
Hpy166II GTNNAC 4 cut(s) 193, 229, 261, 271
Hpy188I TCNGA 5 cut(s) 24, 33, 303, 1113, 1335
Hpy188III TCNNGA 9 cut(s) 67, 797, 860, 1072, 1148, 1305, 1487, 1495, 1688
Hpy8I GTNNAC 4 cut(s) 193, 229, 261, 271
HpyAV CCTTC 2 cut(s) 339, 1593
HpyCH4IV ACGT 1 cut(s) 1551
HpyCH4V TGCA 9 cut(s) 77, 105, 466, 982, 1030, 1313, 1454, 1618, 1640
HpyF10VI GCNNNNNNNGC 4 cut(s) 1175, 1403, 1408, 1637
HpySE526I ACGT 1 cut(s) 1551
Hsp92I GRCGYC 1 cut(s) 856
Kpn2I TCCGGA 1 cut(s) 1147
Ksp22I TGATCA 3 cut(s) 705, 777, 1155
KspAI GTTAAC 1 cut(s) 261
LguI GCTCTTC 1 cut(s) 1185
LmnI GCTCC 2 cut(s) 1369, 1628
Lsp1109I GCAGC 2 cut(s) 1438, 1602
LweI GCATC 5 cut(s) 717, 886, 991, 1388, 1627
MabI ACCWGGT 1 cut(s) 1420
MaeI CTAG 4 cut(s) 482, 1185, 1625, 1688
MaeII ACGT 1 cut(s) 1551
MaeIII GTNAC 9 cut(s) 148, 523, 548, 598, 877, 1055, 1424, 1430, 1651
MflI RGATCY 4 cut(s) 28, 99, 1573, 1690
MhlI GDGCHC 1 cut(s) 1180
MlsI TGGCCA 1 cut(s) 611
MluCI AATT 4 cut(s) 403, 629, 1151, 1658
MluNI TGGCCA 1 cut(s) 611
MlyI GAGTC 1 cut(s) 13
Mox20I TGGCCA 1 cut(s) 611
MroI TCCGGA 1 cut(s) 1147
MscI TGGCCA 1 cut(s) 611
MseI TTAA 6 cut(s) 260, 330, 1019, 1209, 1271, 1458
MslI CAYNNNNRTG 2 cut(s) 1523, 1699
Msp20I TGGCCA 1 cut(s) 611
MspA1I CMGCKG 1 cut(s) 1615
MspI CCGG 4 cut(s) 317, 695, 1148, 1166
MspR9I CCNGG 7 cut(s) 13, 89, 97, 317, 948, 1224, 1422
MvaI CCWGG 6 cut(s) 13, 89, 97, 948, 1224, 1422
MwoI GCNNNNNNNGC 4 cut(s) 1175, 1403, 1408, 1637
NciI CCSGG 1 cut(s) 317
NlaIV GGNNCC 3 cut(s) 1146, 1177, 1575
NmeAIII GCCGAG 1 cut(s) 890
NmuCI GTSAC 4 cut(s) 598, 877, 1055, 1651
NspI RCATGY 2 cut(s) 235, 1354
NspV TTCGAA 1 cut(s) 678
OliI CACNNNNGTG 1 cut(s) 1699
PagI TCATGA 1 cut(s) 796
PciSI GCTCTTC 1 cut(s) 1185
PcsI WCGNNNNNNNCGW 1 cut(s) 1399
PfeI GAWTC 4 cut(s) 1007, 1033, 1094, 1301
PflFI GACNNNGTC 1 cut(s) 143
PfoI TCCNGGA 2 cut(s) 95, 315
PkrI GCNGC 2 cut(s) 1453, 1617
PleI GAGTC 1 cut(s) 13
PpsI GAGTC 1 cut(s) 13
Psp6I CCWGG 6 cut(s) 11, 87, 95, 946, 1222, 1420
PspFI CCCAGC 2 cut(s) 40, 1406
PspGI CCWGG 6 cut(s) 11, 87, 95, 946, 1222, 1420
PspN4I GGNNCC 3 cut(s) 1146, 1177, 1575
PspPI GGNCC 2 cut(s) 692, 1418
PstI CTGCAG 1 cut(s) 1032
PstNI CAGNNNCTG 3 cut(s) 102, 1049, 1111
PsuI RGATCY 4 cut(s) 28, 99, 1573, 1690
PsyI GACNNNGTC 1 cut(s) 143
PvuII CAGCTG 1 cut(s) 1615
RsaI GTAC 4 cut(s) 556, 577, 688, 770
RsaNI GTAC 4 cut(s) 555, 576, 687, 769
RseI CAYNNNNRTG 2 cut(s) 1523, 1699
SapI GCTCTTC 1 cut(s) 1185
SaqAI TTAA 6 cut(s) 260, 330, 1019, 1209, 1271, 1458
SatI GCNGC 2 cut(s) 1452, 1616
Sau96I GGNCC 2 cut(s) 692, 1418
ScaI AGTACT 1 cut(s) 770
SchI GAGTC 1 cut(s) 13
ScrFI CCNGG 7 cut(s) 13, 89, 97, 317, 948, 1224, 1422
SduI GDGCHC 1 cut(s) 1180
SexAI ACCWGGT 1 cut(s) 1420
SfaNI GCATC 5 cut(s) 717, 886, 991, 1388, 1627
SfcI CTRYAG 4 cut(s) 963, 1028, 1359, 1479
SfuI TTCGAA 1 cut(s) 678
SinI GGWCC 2 cut(s) 692, 1418
SmiMI CAYNNNNRTG 2 cut(s) 1523, 1699
Sse9I AATT 4 cut(s) 403, 629, 1151, 1658
SsiI CCGC 6 cut(s) 188, 596, 1411, 1435, 1580, 1676
SspMI CTAG 4 cut(s) 482, 1185, 1625, 1688
StyD4I CCNGG 7 cut(s) 11, 87, 95, 315, 946, 1222, 1420
TaiI ACGT 1 cut(s) 1554
TaqI TCGA 5 cut(s) 66, 643, 678, 924, 1563
TasI AATT 4 cut(s) 403, 629, 1151, 1658
TatI WGTACW 4 cut(s) 554, 575, 686, 768
TfiI GAWTC 4 cut(s) 1007, 1033, 1094, 1301
Tru1I TTAA 6 cut(s) 260, 330, 1019, 1209, 1271, 1458
Tru9I TTAA 6 cut(s) 260, 330, 1019, 1209, 1271, 1458
TscAI CASTG 4 cut(s) 820, 897, 1450, 1656
TseFI GTSAC 4 cut(s) 598, 877, 1055, 1651
TseI GCWGC 2 cut(s) 1451, 1615
Tsp45I GTSAC 4 cut(s) 598, 877, 1055, 1651
TspDTI ATGAA 9 cut(s) 227, 272, 483, 804, 813, 1139, 1280, 1544, 1558
TspGWI ACGGA 1 cut(s) 241
TspRI CASTG 4 cut(s) 820, 897, 1450, 1656
Tth111I GACNNNGTC 1 cut(s) 143
VpaK11BI GGWCC 2 cut(s) 692, 1418
XapI RAATTY 2 cut(s) 403, 629
XbaI TCTAGA 1 cut(s) 1687
XceI RCATGY 2 cut(s) 235, 1354
XspI CTAG 4 cut(s) 482, 1185, 1625, 1688
ZrmI AGTACT 1 cut(s) 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.