Pre-mRNA-splicing factor ATP-dependent RNA
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 3180, 4971 |
| AarI | CACCTGC | 3 cut(s) | 1142, 1391, 1714 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 449, 3454 |
| Acc36I | ACCTGC | 3 cut(s) | 1142, 1391, 1714 |
| AccB1I | GGYRCC | 2 cut(s) | 2087, 2618 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3926, 5836 |
| AccI | GTMKAC | 2 cut(s) | 852, 1830 |
| AcsI | RAATTY | 5 cut(s) | 967, 2591, 4674, 5133, 5671 |
| AcuI | CTGAAG | 6 cut(s) | 942, 1973, 2745, 4106, 4290, 5106 |
| AcyI | GRCGYC | 1 cut(s) | 6010 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 859 |
| AhlI | ACTAGT | 2 cut(s) | 1132, 4996 |
| AjiI | CACGTC | 1 cut(s) | 1516 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 2115, 2147, 3236, 3268, 4079, 4111 |
| AleI | CACNNNNGTG | 1 cut(s) | 422 |
| Alw21I | GWGCWC | 5 cut(s) | 406, 1692, 2720, 3566, 5797 |
| Alw44I | GTGCAC | 1 cut(s) | 1688 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 2147, 3926, 4190, 5063 |
| Ama87I | CYCGRG | 2 cut(s) | 2471, 3601 |
| ApaLI | GTGCAC | 1 cut(s) | 1688 |
| ApoI | RAATTY | 5 cut(s) | 967, 2591, 4674, 5133, 5671 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 232, 264, 879, 911, 4491, 4523, 4934, 4966 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 4098 |
| AspA2I | CCTAGG | 2 cut(s) | 2156, 5438 |
| AspLEI | GCGC | 2 cut(s) | 5602, 5952 |
| AsuC2I | CCSGG | 2 cut(s) | 1995, 4590 |
| AsuNHI | GCTAGC | 1 cut(s) | 1028 |
| AvaI | CYCGRG | 2 cut(s) | 2471, 3601 |
| AvaII | GGWCC | 5 cut(s) | 974, 1508, 4334, 5368, 5731 |
| AvrII | CCTAGG | 2 cut(s) | 2156, 5438 |
| AxyI | CCTNAGG | 1 cut(s) | 5591 |
| BaeGI | GKGCMC | 2 cut(s) | 1692, 4822 |
| BalI | TGGCCA | 6 cut(s) | 416, 457, 790, 1158, 1567, 5360 |
| BamHI | GGATCC | 3 cut(s) | 2246, 5215, 5332 |
| BanI | GGYRCC | 2 cut(s) | 2087, 2618 |
| BanII | GRGCYC | 2 cut(s) | 3566, 5275 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2459, 2491 |
| BauI | CACGAG | 1 cut(s) | 645 |
| BbsI | GAAGAC | 2 cut(s) | 872, 4019 |
| Bbv12I | GWGCWC | 5 cut(s) | 406, 1692, 2720, 3566, 5797 |
| BbvCI | CCTCAGC | 2 cut(s) | 219, 3678 |
| BceAI | ACGGC | 6 cut(s) | 1370, 2338, 2344, 2350, 2356, 5037 |
| BciVI | GTATCC | 1 cut(s) | 3636 |
| BclI | TGATCA | 4 cut(s) | 426, 1518, 3385, 5461 |
| BcnI | CCSGG | 2 cut(s) | 1995, 4590 |
| BcuI | ACTAGT | 2 cut(s) | 1132, 4996 |
| BfuAI | ACCTGC | 3 cut(s) | 1142, 1391, 1714 |
| BfuI | GTATCC | 1 cut(s) | 3636 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 779 |
| BlnI | CCTAGG | 2 cut(s) | 2156, 5438 |
| BlpI | GCTNAGC | 3 cut(s) | 724, 1167, 1666 |
| BmcAI | AGTACT | 3 cut(s) | 2104, 2224, 4412 |
| Bme18I | GGWCC | 5 cut(s) | 974, 1508, 4334, 5368, 5731 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 859 |
| BmeT110I | CYCGRG | 2 cut(s) | 2471, 3601 |
| BmgBI | CACGTC | 1 cut(s) | 1516 |
| BmrI | ACTGGG | 3 cut(s) | 1046, 3405, 4821 |
| BmtI | GCTAGC | 1 cut(s) | 1032 |
| BmuI | ACTGGG | 3 cut(s) | 1046, 3405, 4821 |
| BpiI | GAAGAC | 2 cut(s) | 872, 4019 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2687, 2719 |
| BpmI | CTGGAG | 2 cut(s) | 970, 1924 |
| Bpu10I | CCTNAGC | 2 cut(s) | 219, 3678 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 724, 1167, 1666 |
| BpuEI | CTTGAG | 5 cut(s) | 162, 256, 313, 1299, 3710 |
| BpuMI | CCSGG | 2 cut(s) | 1995, 4590 |
| Bsa29I | ATCGAT | 2 cut(s) | 3046, 4920 |
| BsaAI | YACGTR | 1 cut(s) | 4232 |
| BsaBI | GATNNNNATC | 2 cut(s) | 3384, 3894 |
| BsaHI | GRCGYC | 1 cut(s) | 6010 |
| BsaI | GGTCTC | 5 cut(s) | 880, 1633, 3196, 3500, 4492 |
| BsaWI | WCCGGW | 5 cut(s) | 1465, 1510, 2386, 3568, 5812 |
| Bse118I | RCCGGY | 1 cut(s) | 3543 |
| Bse21I | CCTNAGG | 1 cut(s) | 5591 |
| Bse3DI | GCAATG | 5 cut(s) | 2289, 4251, 5110, 5184, 5400 |
| Bse8I | GATNNNNATC | 2 cut(s) | 3384, 3894 |
| BseCI | ATCGAT | 2 cut(s) | 3046, 4920 |
| BseJI | GATNNNNATC | 2 cut(s) | 3384, 3894 |
| BseMI | GCAATG | 5 cut(s) | 2289, 4251, 5110, 5184, 5400 |
| BseRI | GAGGAG | 4 cut(s) | 207, 351, 1296, 2642 |
| BseSI | GKGCMC | 2 cut(s) | 1692, 4822 |
| BseYI | CCCAGC | 2 cut(s) | 4190, 5039 |
| BsgI | GTGCAG | 7 cut(s) | 948, 1425, 1707, 1998, 3792, 3804, 3822 |
| BshNI | GGYRCC | 2 cut(s) | 2087, 2618 |
| BshVI | ATCGAT | 2 cut(s) | 3046, 4920 |
| BsiHKAI | GWGCWC | 5 cut(s) | 406, 1692, 2720, 3566, 5797 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2471, 3601 |
| BsmBI | CGTCTC | 1 cut(s) | 507 |
| BsmI | GAATGC | 3 cut(s) | 14, 754, 1296 |
| Bso31I | GGTCTC | 5 cut(s) | 880, 1633, 3196, 3500, 4492 |
| BsoBI | CYCGRG | 2 cut(s) | 2471, 3601 |
| Bsp1286I | GDGCHC | 7 cut(s) | 406, 1692, 2720, 3566, 4822, 5275, 5797 |
| Bsp1407I | TGTACA | 1 cut(s) | 4220 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 724, 1167, 1666 |
| Bsp19I | CCATGG | 1 cut(s) | 304 |
| BspDI | ATCGAT | 2 cut(s) | 3046, 4920 |
| BspHI | TCATGA | 3 cut(s) | 1014, 3016, 4438 |
| BspMAI | CTGCAG | 5 cut(s) | 688, 1711, 3751, 5381, 5704 |
| BspMI | ACCTGC | 3 cut(s) | 1142, 1391, 1714 |
| BspOI | GCTAGC | 1 cut(s) | 1032 |
| BspT107I | GGYRCC | 2 cut(s) | 2087, 2618 |
| BspTNI | GGTCTC | 5 cut(s) | 880, 1633, 3196, 3500, 4492 |
| BsrDI | GCAATG | 5 cut(s) | 2289, 4251, 5110, 5184, 5400 |
| BsrFI | RCCGGY | 1 cut(s) | 3543 |
| BsrGI | TGTACA | 1 cut(s) | 4220 |
| BssAI | RCCGGY | 1 cut(s) | 3543 |
| BssNI | GRCGYC | 1 cut(s) | 6010 |
| BssSI | CACGAG | 1 cut(s) | 645 |
| Bst2BI | CACGAG | 1 cut(s) | 645 |
| BstACI | GRCGYC | 1 cut(s) | 6010 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 4069, 5699 |
| BstAUI | TGTACA | 1 cut(s) | 4220 |
| BstBAI | YACGTR | 1 cut(s) | 4232 |
| BstDSI | CCRYGG | 2 cut(s) | 304, 417 |
| BstEII | GGTNACC | 1 cut(s) | 1701 |
| BstHHI | GCGC | 2 cut(s) | 5602, 5952 |
| BstNSI | RCATGY | 4 cut(s) | 1227, 1829, 3985, 4746 |
| BstPI | GGTNACC | 1 cut(s) | 1701 |
| BstSLI | GKGCMC | 2 cut(s) | 1692, 4822 |
| BstV2I | GAAGAC | 2 cut(s) | 872, 4019 |
| BstX2I | RGATCY | 7 cut(s) | 638, 2246, 3889, 3910, 5215, 5332, 5388 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 305, 2039, 6006 |
| BstYI | RGATCY | 7 cut(s) | 638, 2246, 3889, 3910, 5215, 5332, 5388 |
| Bsu15I | ATCGAT | 2 cut(s) | 3046, 4920 |
| Bsu36I | CCTNAGG | 1 cut(s) | 5591 |
| BsuI | GTATCC | 1 cut(s) | 3636 |
| BsuTUI | ATCGAT | 2 cut(s) | 3046, 4920 |
| BtgI | CCRYGG | 2 cut(s) | 304, 417 |
| BtrI | CACGTC | 1 cut(s) | 1516 |
| BtsI | GCAGTG | 8 cut(s) | 153, 672, 2118, 2301, 2718, 4113, 5386, 5797 |
| BveI | ACCTGC | 3 cut(s) | 1142, 1391, 1714 |
| CaiI | CAGNNNCTG | 4 cut(s) | 2147, 3926, 4190, 5063 |
| CciI | TCATGA | 3 cut(s) | 1014, 3016, 4438 |
| CfoI | GCGC | 2 cut(s) | 5602, 5952 |
| Cfr10I | RCCGGY | 1 cut(s) | 3543 |
| ClaI | ATCGAT | 2 cut(s) | 3046, 4920 |
| CseI | GACGC | 2 cut(s) | 5945, 5999 |
| CsiI | ACCWGGT | 1 cut(s) | 3737 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1345, 1380 |
| DraI | TTTAAA | 1 cut(s) | 2311 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 449, 3454 |
| DriI | GACNNNNNGTC | 1 cut(s) | 859 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 449, 3454 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 859 |
| EciI | GGCGGA | 2 cut(s) | 2390, 3013 |
| Ecl136II | GAGCTC | 1 cut(s) | 3564 |
| Eco147I | AGGCCT | 2 cut(s) | 782, 5437 |
| Eco24I | GRGCYC | 2 cut(s) | 3566, 5275 |
| Eco31I | GGTCTC | 5 cut(s) | 880, 1633, 3196, 3500, 4492 |
| Eco32I | GATATC | 3 cut(s) | 1870, 2788, 3462 |
| Eco47I | GGWCC | 5 cut(s) | 974, 1508, 4334, 5368, 5731 |
| Eco53kI | GAGCTC | 1 cut(s) | 3564 |
| Eco57I | CTGAAG | 6 cut(s) | 942, 1973, 2745, 4106, 4290, 5106 |
| Eco81I | CCTNAGG | 1 cut(s) | 5591 |
| Eco88I | CYCGRG | 2 cut(s) | 2471, 3601 |
| Eco91I | GGTNACC | 1 cut(s) | 1701 |
| EcoICRI | GAGCTC | 1 cut(s) | 3564 |
| EcoO109I | RGGNCCY | 4 cut(s) | 974, 5060, 5552, 5731 |
| EcoO65I | GGTNACC | 1 cut(s) | 1701 |
| EcoRI | GAATTC | 1 cut(s) | 2591 |
| EcoRV | GATATC | 3 cut(s) | 1870, 2788, 3462 |
| EcoT22I | ATGCAT | 1 cut(s) | 4654 |
| EcoT38I | GRGCYC | 2 cut(s) | 3566, 5275 |
| Esp3I | CGTCTC | 1 cut(s) | 507 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 5274, 5306 |
| FauI | CCCGC | 2 cut(s) | 2386, 5856 |
| FbaI | TGATCA | 4 cut(s) | 426, 1518, 3385, 5461 |
| FblI | GTMKAC | 2 cut(s) | 852, 1830 |
| FriOI | GRGCYC | 2 cut(s) | 3566, 5275 |
| GlaI | GCGC | 2 cut(s) | 5601, 5951 |
| GsaI | CCCAGC | 2 cut(s) | 4194, 5043 |
| GsuI | CTGGAG | 2 cut(s) | 970, 1924 |
| HgaI | GACGC | 2 cut(s) | 5945, 5999 |
| HhaI | GCGC | 2 cut(s) | 5602, 5952 |
| Hin1I | GRCGYC | 1 cut(s) | 6010 |
| Hin6I | GCGC | 2 cut(s) | 5600, 5950 |
| HinP1I | GCGC | 2 cut(s) | 5600, 5950 |
| HincII | GTYRAC | 4 cut(s) | 442, 1549, 1831, 5881 |
| HindII | GTYRAC | 4 cut(s) | 442, 1549, 1831, 5881 |
| HindIII | AAGCTT | 6 cut(s) | 563, 712, 1045, 1064, 1199, 4040 |
| Hpy99I | CGWCG | 6 cut(s) | 2353, 2359, 2365, 2371, 2377, 3460 |
| HpyCH4IV | ACGT | 4 cut(s) | 1515, 4231, 5652, 5965 |
| HpySE526I | ACGT | 4 cut(s) | 1515, 4231, 5652, 5965 |
| Hsp92I | GRCGYC | 1 cut(s) | 6010 |
| HspAI | GCGC | 2 cut(s) | 5600, 5950 |
| KroI | GCCGGC | 1 cut(s) | 3543 |
| KroNI | GCCGGC | 1 cut(s) | 3545 |
| Ksp22I | TGATCA | 4 cut(s) | 426, 1518, 3385, 5461 |
| MabI | ACCWGGT | 1 cut(s) | 3737 |
| MaeII | ACGT | 4 cut(s) | 1515, 4231, 5652, 5965 |
| MflI | RGATCY | 7 cut(s) | 638, 2246, 3889, 3910, 5215, 5332, 5388 |
| MhlI | GDGCHC | 7 cut(s) | 406, 1692, 2720, 3566, 4822, 5275, 5797 |
| MlsI | TGGCCA | 6 cut(s) | 416, 457, 790, 1158, 1567, 5360 |
| MluNI | TGGCCA | 6 cut(s) | 416, 457, 790, 1158, 1567, 5360 |
| MlyI | GAGTC | 5 cut(s) | 459, 624, 644, 2696, 3805 |
| MmeI | TCCRAC | 7 cut(s) | 589, 958, 1486, 2194, 2787, 3852, 4282 |
| Mox20I | TGGCCA | 6 cut(s) | 416, 457, 790, 1158, 1567, 5360 |
| Mph1103I | ATGCAT | 1 cut(s) | 4654 |
| MroNI | GCCGGC | 1 cut(s) | 3543 |
| MroXI | GAANNNNTTC | 1 cut(s) | 4098 |
| MscI | TGGCCA | 6 cut(s) | 416, 457, 790, 1158, 1567, 5360 |
| Msp20I | TGGCCA | 6 cut(s) | 416, 457, 790, 1158, 1567, 5360 |
| MspA1I | CMGCKG | 2 cut(s) | 962, 3806 |
| Mva1269I | GAATGC | 3 cut(s) | 14, 754, 1296 |
| NaeI | GCCGGC | 1 cut(s) | 3545 |
| NciI | CCSGG | 2 cut(s) | 1995, 4590 |
| NcoI | CCATGG | 1 cut(s) | 304 |
| NgoMIV | GCCGGC | 1 cut(s) | 3543 |
| NheI | GCTAGC | 1 cut(s) | 1028 |
| NmeAIII | GCCGAG | 5 cut(s) | 2572, 2647, 3259, 4927, 5344 |
| NsiI | ATGCAT | 1 cut(s) | 4654 |
| NspI | RCATGY | 4 cut(s) | 1227, 1829, 3985, 4746 |
| OliI | CACNNNNGTG | 1 cut(s) | 422 |
| PaeI | GCATGC | 1 cut(s) | 4746 |
| PaeR7I | CTCGAG | 1 cut(s) | 2471 |
| PagI | TCATGA | 3 cut(s) | 1014, 3016, 4438 |
| PaqCI | CACCTGC | 3 cut(s) | 1142, 1391, 1714 |
| PceI | AGGCCT | 2 cut(s) | 782, 5437 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 945, 2357, 2363, 2369, 5041 |
| PctI | GAATGC | 3 cut(s) | 14, 754, 1296 |
| PdiI | GCCGGC | 1 cut(s) | 3545 |
| PdmI | GAANNNNTTC | 1 cut(s) | 4098 |
| PfeI | GAWTC | 9 cut(s) | 155, 2392, 3437, 3778, 3875, 3895, 4384, 4991, 5410 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3926, 5836 |
| PfoI | TCCNGGA | 2 cut(s) | 312, 1852 |
| PleI | GAGTC | 5 cut(s) | 458, 623, 644, 2696, 3804 |
| PpsI | GAGTC | 5 cut(s) | 458, 623, 644, 2696, 3804 |
| Ppu21I | YACGTR | 1 cut(s) | 4232 |
| PpuMI | RGGWCCY | 2 cut(s) | 974, 5731 |
| PsiI | TTATAA | 2 cut(s) | 3180, 4971 |
| Psp124BI | GAGCTC | 1 cut(s) | 3566 |
| Psp5II | RGGWCCY | 2 cut(s) | 974, 5731 |
| PspEI | GGTNACC | 1 cut(s) | 1701 |
| PspFI | CCCAGC | 2 cut(s) | 4190, 5039 |
| PspPPI | RGGWCCY | 2 cut(s) | 974, 5731 |
| PspXI | VCTCGAGB | 1 cut(s) | 2471 |
| PstI | CTGCAG | 5 cut(s) | 688, 1711, 3751, 5381, 5704 |
| PstNI | CAGNNNCTG | 4 cut(s) | 2147, 3926, 4190, 5063 |
| PsuI | RGATCY | 7 cut(s) | 638, 2246, 3889, 3910, 5215, 5332, 5388 |
| PvuII | CAGCTG | 2 cut(s) | 962, 3806 |
| SacI | GAGCTC | 1 cut(s) | 3566 |
| SalI | GTCGAC | 1 cut(s) | 1829 |
| ScaI | AGTACT | 3 cut(s) | 2104, 2224, 4412 |
| SchI | GAGTC | 5 cut(s) | 459, 624, 644, 2696, 3805 |
| SduI | GDGCHC | 7 cut(s) | 406, 1692, 2720, 3566, 4822, 5275, 5797 |
| SexAI | ACCWGGT | 1 cut(s) | 3737 |
| Sfr274I | CTCGAG | 1 cut(s) | 2471 |
| SinI | GGWCC | 5 cut(s) | 974, 1508, 4334, 5368, 5731 |
| SlaI | CTCGAG | 1 cut(s) | 2471 |
| SmlI | CTYRAG | 6 cut(s) | 177, 271, 292, 1314, 2471, 3689 |
| SmoI | CTYRAG | 6 cut(s) | 177, 271, 292, 1314, 2471, 3689 |
| SpeI | ACTAGT | 2 cut(s) | 1132, 4996 |
| SphI | GCATGC | 1 cut(s) | 4746 |
| SseBI | AGGCCT | 2 cut(s) | 782, 5437 |
| SspI | AATATT | 2 cut(s) | 907, 3771 |
| SstI | GAGCTC | 1 cut(s) | 3566 |
| StuI | AGGCCT | 2 cut(s) | 782, 5437 |
| TaiI | ACGT | 4 cut(s) | 1518, 4234, 5655, 5968 |
| TaqI | TCGA | 8 cut(s) | 1179, 1830, 2472, 2595, 3046, 3458, 4920, 5584 |
| TaqII | GACCGA | 1 cut(s) | 1056 |
| TatI | WGTACW | 5 cut(s) | 2102, 2222, 4220, 4353, 4410 |
| TauI | GCSGC | 1 cut(s) | 2384 |
| TfiI | GAWTC | 9 cut(s) | 155, 2392, 3437, 3778, 3875, 3895, 4384, 4991, 5410 |
| TspGWI | ACGGA | 8 cut(s) | 434, 937, 954, 2337, 2633, 3056, 4376, 4700 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3926, 5836 |
| VneI | GTGCAC | 1 cut(s) | 1688 |
| VpaK11BI | GGWCC | 5 cut(s) | 974, 1508, 4334, 5368, 5731 |
| XapI | RAATTY | 5 cut(s) | 967, 2591, 4674, 5133, 5671 |
| XceI | RCATGY | 4 cut(s) | 1227, 1829, 3985, 4746 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 5893 |
| XhoI | CTCGAG | 1 cut(s) | 2471 |
| XmaJI | CCTAGG | 2 cut(s) | 2156, 5438 |
| XmiI | GTMKAC | 2 cut(s) | 852, 1830 |
| XmnI | GAANNNNTTC | 1 cut(s) | 4098 |
| ZrmI | AGTACT | 3 cut(s) | 2104, 2224, 4412 |
| Zsp2I | ATGCAT | 1 cut(s) | 4654 |