Pre-mRNA-splicing factor ATP-dependent RNA
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 987 |
| AccB1I | GGYRCC | 2 cut(s) | 1018, 2062 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 914, 1235 |
| AccBSI | CCGCTC | 1 cut(s) | 1425 |
| AciI | CCGC | 4 cut(s) | 1256, 1292, 1425, 2081 |
| AclWI | GGATC | 5 cut(s) | 912, 925, 1757, 2220, 2304 |
| AcoI | YGGCCR | 3 cut(s) | 886, 1226, 2056 |
| AcsI | RAATTY | 6 cut(s) | 257, 371, 540, 569, 627, 1655 |
| AcuI | CTGAAG | 1 cut(s) | 2187 |
| AfaI | GTAC | 6 cut(s) | 18, 980, 1576, 1599, 1953, 2128 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 305, 914, 1235 |
| AflIII | ACRYGT | 1 cut(s) | 1864 |
| AjnI | CCWGG | 6 cut(s) | 298, 318, 1309, 1918, 1935, 2058 |
| AluBI | AGCT | 9 cut(s) | 176, 493, 854, 967, 1392, 1730, 1815, 2207, 2427 |
| AluI | AGCT | 9 cut(s) | 176, 493, 854, 967, 1392, 1730, 1815, 2207, 2427 |
| Alw26I | GTCTC | 4 cut(s) | 463, 839, 1744, 2241 |
| AlwI | GGATC | 5 cut(s) | 912, 925, 1757, 2220, 2304 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 996 |
| Ama87I | CYCGRG | 1 cut(s) | 2334 |
| ApaI | GGGCCC | 3 cut(s) | 434, 904, 1192 |
| ApeKI | GCWGC | 3 cut(s) | 808, 1389, 2078 |
| ApoI | RAATTY | 6 cut(s) | 257, 371, 540, 569, 627, 1655 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 569, 1905 |
| AspLEI | GCGC | 1 cut(s) | 182 |
| AsuHPI | GGTGA | 3 cut(s) | 92, 468, 1907 |
| AsuNHI | GCTAGC | 1 cut(s) | 176 |
| AvaI | CYCGRG | 1 cut(s) | 2334 |
| AvaII | GGWCC | 1 cut(s) | 548 |
| BaeGI | GKGCMC | 3 cut(s) | 434, 904, 1192 |
| BalI | TGGCCA | 3 cut(s) | 888, 1228, 2058 |
| BamHI | GGATCC | 1 cut(s) | 917 |
| BanI | GGYRCC | 2 cut(s) | 1018, 2062 |
| BanII | GRGCYC | 3 cut(s) | 434, 904, 1192 |
| BauI | CACGAG | 1 cut(s) | 849 |
| BbsI | GAAGAC | 1 cut(s) | 1541 |
| BbvCI | CCTCAGC | 2 cut(s) | 669, 2208 |
| BbvI | GCAGC | 3 cut(s) | 820, 1401, 2065 |
| BcgI | CGANNNNNNTGC | 3 cut(s) | 29, 2315, 2349 |
| BciT130I | CCWGG | 6 cut(s) | 300, 320, 1311, 1920, 1937, 2060 |
| BclI | TGATCA | 1 cut(s) | 1966 |
| BcoDI | GTCTC | 4 cut(s) | 463, 839, 1744, 2241 |
| BfaI | CTAG | 6 cut(s) | 177, 243, 1512, 1713, 1992, 2467 |
| BisI | GCNGC | 4 cut(s) | 809, 1390, 2079, 2082 |
| BlsI | GCNGC | 4 cut(s) | 810, 1391, 2080, 2083 |
| BmcAI | AGTACT | 2 cut(s) | 980, 1576 |
| Bme1390I | CCNGG | 6 cut(s) | 300, 320, 1311, 1920, 1937, 2060 |
| Bme18I | GGWCC | 1 cut(s) | 548 |
| BmeT110I | CYCGRG | 1 cut(s) | 2334 |
| BmrFI | CCNGG | 6 cut(s) | 300, 320, 1311, 1920, 1937, 2060 |
| BmrI | ACTGGG | 1 cut(s) | 1895 |
| BmsI | GCATC | 3 cut(s) | 183, 1349, 1449 |
| BmtI | GCTAGC | 1 cut(s) | 180 |
| BmuI | ACTGGG | 1 cut(s) | 1895 |
| BoxI | GACNNNNGTC | 1 cut(s) | 455 |
| BpiI | GAAGAC | 1 cut(s) | 1541 |
| BpmI | CTGGAG | 1 cut(s) | 2177 |
| Bpu10I | CCTNAGC | 2 cut(s) | 669, 2208 |
| BpuEI | CTTGAG | 1 cut(s) | 540 |
| BsaJI | CCNNGG | 9 cut(s) | 159, 318, 760, 1309, 1310, 1343, 1827, 1919, 1935 |
| BsaWI | WCCGGW | 1 cut(s) | 452 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 447, 477, 2346, 2376 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 305, 914, 1235 |
| Bse1I | ACTGG | 7 cut(s) | 755, 1229, 1488, 1520, 1890, 1959, 2323 |
| Bse3DI | GCAATG | 3 cut(s) | 330, 654, 1637 |
| BseBI | CCWGG | 6 cut(s) | 300, 320, 1311, 1920, 1937, 2060 |
| BseDI | CCNNGG | 9 cut(s) | 159, 318, 760, 1309, 1310, 1343, 1827, 1919, 1935 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 305, 914, 1235 |
| BseMI | GCAATG | 3 cut(s) | 330, 654, 1637 |
| BseMII | CTCAG | 4 cut(s) | 11, 210, 660, 2199 |
| BseNI | ACTGG | 7 cut(s) | 755, 1229, 1488, 1520, 1890, 1959, 2323 |
| BseSI | GKGCMC | 3 cut(s) | 434, 904, 1192 |
| BseXI | GCAGC | 3 cut(s) | 820, 1401, 2065 |
| BsgI | GTGCAG | 1 cut(s) | 798 |
| BshNI | GGYRCC | 2 cut(s) | 1018, 2062 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2334 |
| BsiSI | CCGG | 2 cut(s) | 453, 551 |
| BslFI | GGGAC | 1 cut(s) | 1505 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 305, 914, 1235 |
| BsmAI | GTCTC | 4 cut(s) | 463, 839, 1744, 2241 |
| BsmFI | GGGAC | 1 cut(s) | 1505 |
| BsmI | GAATGC | 1 cut(s) | 1622 |
| BsoBI | CYCGRG | 1 cut(s) | 2334 |
| Bsp120I | GGGCCC | 3 cut(s) | 430, 900, 1188 |
| Bsp1286I | GDGCHC | 3 cut(s) | 434, 904, 1192 |
| Bsp143I | GATC | 5 cut(s) | 917, 1762, 1966, 2212, 2296 |
| Bsp19I | CCATGG | 2 cut(s) | 159, 1343 |
| BspACI | CCGC | 4 cut(s) | 1256, 1292, 1425, 2081 |
| BspCNI | CTCAG | 4 cut(s) | 12, 211, 661, 2200 |
| BspHI | TCATGA | 1 cut(s) | 1027 |
| BspOI | GCTAGC | 1 cut(s) | 180 |
| BspPI | GGATC | 5 cut(s) | 912, 925, 1757, 2220, 2304 |
| BspT107I | GGYRCC | 2 cut(s) | 1018, 2062 |
| BsrBI | CCGCTC | 1 cut(s) | 1425 |
| BsrDI | GCAATG | 3 cut(s) | 330, 654, 1637 |
| BsrI | ACTGG | 7 cut(s) | 755, 1229, 1488, 1520, 1890, 1959, 2323 |
| BssECI | CCNNGG | 9 cut(s) | 159, 318, 760, 1309, 1310, 1343, 1827, 1919, 1935 |
| BssMI | GATC | 5 cut(s) | 917, 1762, 1966, 2212, 2296 |
| BssSI | CACGAG | 1 cut(s) | 849 |
| BssT1I | CCWWGG | 4 cut(s) | 159, 760, 1343, 1827 |
| Bst2BI | CACGAG | 1 cut(s) | 849 |
| Bst2UI | CCWGG | 6 cut(s) | 300, 320, 1311, 1920, 1937, 2060 |
| Bst4CI | ACNGT | 3 cut(s) | 839, 983, 1322 |
| Bst6I | CTCTTC | 4 cut(s) | 138, 1215, 1747, 1920 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1007 |
| BstC8I | GCNNGC | 4 cut(s) | 178, 813, 1813, 1989 |
| BstDEI | CTNAG | 5 cut(s) | 20, 219, 335, 669, 2208 |
| BstDSI | CCRYGG | 2 cut(s) | 159, 1343 |
| BstHHI | GCGC | 1 cut(s) | 182 |
| BstKTI | GATC | 5 cut(s) | 920, 1765, 1969, 2215, 2299 |
| BstMAI | GTCTC | 4 cut(s) | 463, 839, 1744, 2241 |
| BstMBI | GATC | 5 cut(s) | 917, 1762, 1966, 2212, 2296 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 665, 1007, 1016, 1196, 2087, 2204 |
| BstNI | CCWGG | 6 cut(s) | 300, 320, 1311, 1920, 1937, 2060 |
| BstNSI | RCATGY | 1 cut(s) | 1868 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 455 |
| BstSCI | CCNGG | 6 cut(s) | 298, 318, 1309, 1918, 1935, 2058 |
| BstSLI | GKGCMC | 3 cut(s) | 434, 904, 1192 |
| BstV1I | GCAGC | 3 cut(s) | 820, 1401, 2065 |
| BstV2I | GAAGAC | 1 cut(s) | 1541 |
| BstX2I | RGATCY | 3 cut(s) | 917, 2212, 2296 |
| BstYI | RGATCY | 3 cut(s) | 917, 2212, 2296 |
| BtgI | CCRYGG | 2 cut(s) | 159, 1343 |
| BtsIMutI | CAGTG | 6 cut(s) | 729, 844, 1236, 1481, 1883, 2316 |
| Cac8I | GCNNGC | 4 cut(s) | 178, 813, 1813, 1989 |
| CaiI | CAGNNNCTG | 1 cut(s) | 996 |
| CciI | TCATGA | 1 cut(s) | 1027 |
| CfoI | GCGC | 1 cut(s) | 182 |
| CseI | GACGC | 1 cut(s) | 40 |
| Csp6I | GTAC | 6 cut(s) | 17, 979, 1575, 1598, 1952, 2127 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 703, 738, 878, 913 |
| CviQI | GTAC | 6 cut(s) | 17, 979, 1575, 1598, 1952, 2127 |
| DdeI | CTNAG | 5 cut(s) | 20, 219, 335, 669, 2208 |
| DpnI | GATC | 5 cut(s) | 919, 1764, 1968, 2214, 2298 |
| DpnII | GATC | 5 cut(s) | 917, 1762, 1966, 2212, 2296 |
| EaeI | YGGCCR | 3 cut(s) | 886, 1226, 2056 |
| Eam1104I | CTCTTC | 4 cut(s) | 138, 1215, 1747, 1920 |
| EarI | CTCTTC | 4 cut(s) | 138, 1215, 1747, 1920 |
| Eco130I | CCWWGG | 4 cut(s) | 159, 760, 1343, 1827 |
| Eco147I | AGGCCT | 2 cut(s) | 2162, 2407 |
| Eco24I | GRGCYC | 3 cut(s) | 434, 904, 1192 |
| Eco47I | GGWCC | 1 cut(s) | 548 |
| Eco57I | CTGAAG | 1 cut(s) | 2187 |
| Eco88I | CYCGRG | 1 cut(s) | 2334 |
| EcoO109I | RGGNCCY | 4 cut(s) | 430, 901, 993, 1188 |
| EcoRI | GAATTC | 2 cut(s) | 257, 569 |
| EcoRII | CCWGG | 6 cut(s) | 298, 318, 1309, 1918, 1935, 2058 |
| EcoT14I | CCWWGG | 4 cut(s) | 159, 760, 1343, 1827 |
| EcoT38I | GRGCYC | 3 cut(s) | 434, 904, 1192 |
| ErhI | CCWWGG | 4 cut(s) | 159, 760, 1343, 1827 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1389, 1421 |
| FaqI | GGGAC | 1 cut(s) | 1505 |
| FbaI | TGATCA | 1 cut(s) | 1966 |
| Fnu4HI | GCNGC | 4 cut(s) | 809, 1390, 2079, 2082 |
| FriOI | GRGCYC | 3 cut(s) | 434, 904, 1192 |
| Fsp4HI | GCNGC | 4 cut(s) | 809, 1390, 2079, 2082 |
| FspBI | CTAG | 6 cut(s) | 177, 243, 1512, 1713, 1992, 2467 |
| GlaI | GCGC | 1 cut(s) | 181 |
| GluI | GCNGC | 4 cut(s) | 809, 1390, 2079, 2082 |
| GsuI | CTGGAG | 1 cut(s) | 2177 |
| HapII | CCGG | 2 cut(s) | 453, 551 |
| HgaI | GACGC | 1 cut(s) | 40 |
| HhaI | GCGC | 1 cut(s) | 182 |
| Hin6I | GCGC | 1 cut(s) | 180 |
| HinP1I | GCGC | 1 cut(s) | 180 |
| HincII | GTYRAC | 3 cut(s) | 55, 341, 835 |
| HindII | GTYRAC | 3 cut(s) | 55, 341, 835 |
| HindIII | AAGCTT | 3 cut(s) | 491, 965, 1813 |
| HpaI | GTTAAC | 1 cut(s) | 835 |
| HpaII | CCGG | 2 cut(s) | 453, 551 |
| HphI | GGTGA | 3 cut(s) | 92, 468, 1907 |
| Hpy166II | GTNNAC | 6 cut(s) | 55, 111, 341, 418, 835, 1883 |
| Hpy188I | TCNGA | 8 cut(s) | 643, 1036, 1354, 1624, 1693, 2194, 2310, 2416 |
| Hpy188III | TCNNGA | 6 cut(s) | 254, 512, 562, 1028, 1553, 2156 |
| Hpy8I | GTNNAC | 6 cut(s) | 55, 111, 341, 418, 835, 1883 |
| HpyAV | CCTTC | 8 cut(s) | 71, 90, 559, 1390, 1790, 2168, 2211, 2338 |
| HpyCH4III | ACNGT | 3 cut(s) | 839, 983, 1322 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 665, 1007, 1016, 1196, 2087, 2204 |
| HpyF3I | CTNAG | 5 cut(s) | 20, 219, 335, 669, 2208 |
| HspAI | GCGC | 1 cut(s) | 180 |
| Ksp22I | TGATCA | 1 cut(s) | 1966 |
| KspAI | GTTAAC | 1 cut(s) | 835 |
| Kzo9I | GATC | 5 cut(s) | 917, 1762, 1966, 2212, 2296 |
| LmnI | GCTCC | 2 cut(s) | 320, 1937 |
| Lsp1109I | GCAGC | 3 cut(s) | 820, 1401, 2065 |
| LweI | GCATC | 3 cut(s) | 183, 1349, 1449 |
| MaeI | CTAG | 6 cut(s) | 177, 243, 1512, 1713, 1992, 2467 |
| MaeIII | GTNAC | 3 cut(s) | 246, 1860, 2105 |
| MalI | GATC | 5 cut(s) | 919, 1764, 1968, 2214, 2298 |
| MbiI | CCGCTC | 1 cut(s) | 1425 |
| MboI | GATC | 5 cut(s) | 917, 1762, 1966, 2212, 2296 |
| MfeI | CAATTG | 1 cut(s) | 1845 |
| MflI | RGATCY | 3 cut(s) | 917, 2212, 2296 |
| MhlI | GDGCHC | 3 cut(s) | 434, 904, 1192 |
| MlsI | TGGCCA | 3 cut(s) | 888, 1228, 2058 |
| MluNI | TGGCCA | 3 cut(s) | 888, 1228, 2058 |
| MlyI | GAGTC | 3 cut(s) | 114, 465, 515 |
| MmeI | TCCRAC | 1 cut(s) | 2439 |
| Mox20I | TGGCCA | 3 cut(s) | 888, 1228, 2058 |
| MroXI | GAANNNNTTC | 2 cut(s) | 569, 1905 |
| MscI | TGGCCA | 3 cut(s) | 888, 1228, 2058 |
| MseI | TTAA | 7 cut(s) | 144, 834, 858, 1014, 1632, 2433, 2451 |
| MslI | CAYNNNNRTG | 2 cut(s) | 700, 879 |
| Msp20I | TGGCCA | 3 cut(s) | 888, 1228, 2058 |
| MspA1I | CMGCKG | 2 cut(s) | 1392, 2207 |
| MspI | CCGG | 2 cut(s) | 453, 551 |
| MspR9I | CCNGG | 6 cut(s) | 300, 320, 1311, 1920, 1937, 2060 |
| MunI | CAATTG | 1 cut(s) | 1845 |
| Mva1269I | GAATGC | 1 cut(s) | 1622 |
| MvaI | CCWGG | 6 cut(s) | 300, 320, 1311, 1920, 1937, 2060 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 665, 1007, 1016, 1196, 2087, 2204 |
| NcoI | CCATGG | 2 cut(s) | 159, 1343 |
| NdeII | GATC | 5 cut(s) | 917, 1762, 1966, 2212, 2296 |
| NheI | GCTAGC | 1 cut(s) | 176 |
| NspI | RCATGY | 1 cut(s) | 1868 |
| PagI | TCATGA | 1 cut(s) | 1027 |
| PasI | CCCWGGG | 1 cut(s) | 1310 |
| PceI | AGGCCT | 2 cut(s) | 2162, 2407 |
| PciI | ACATGT | 1 cut(s) | 1864 |
| PctI | GAATGC | 1 cut(s) | 1622 |
| PdmI | GAANNNNTTC | 2 cut(s) | 569, 1905 |
| PfeI | GAWTC | 9 cut(s) | 150, 1031, 1128, 1181, 1205, 1273, 1454, 1672, 2095 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 914, 1235 |
| PkrI | GCNGC | 4 cut(s) | 810, 1391, 2080, 2083 |
| PleI | GAGTC | 3 cut(s) | 114, 464, 515 |
| PpsI | GAGTC | 3 cut(s) | 114, 464, 515 |
| PscI | ACATGT | 1 cut(s) | 1864 |
| PshAI | GACNNNNGTC | 1 cut(s) | 455 |
| PsiI | TTATAA | 1 cut(s) | 987 |
| Psp6I | CCWGG | 6 cut(s) | 298, 318, 1309, 1918, 1935, 2058 |
| PspGI | CCWGG | 6 cut(s) | 298, 318, 1309, 1918, 1935, 2058 |
| PspOMI | GGGCCC | 3 cut(s) | 430, 900, 1188 |
| PstNI | CAGNNNCTG | 1 cut(s) | 996 |
| PsuI | RGATCY | 3 cut(s) | 917, 2212, 2296 |
| PvuII | CAGCTG | 2 cut(s) | 1392, 2207 |
| RsaI | GTAC | 6 cut(s) | 18, 980, 1576, 1599, 1953, 2128 |
| RsaNI | GTAC | 6 cut(s) | 17, 979, 1575, 1598, 1952, 2127 |
| RseI | CAYNNNNRTG | 2 cut(s) | 700, 879 |
| SaqAI | TTAA | 7 cut(s) | 144, 834, 858, 1014, 1632, 2433, 2451 |
| SatI | GCNGC | 4 cut(s) | 809, 1390, 2079, 2082 |
| Sau3AI | GATC | 5 cut(s) | 917, 1762, 1966, 2212, 2296 |
| ScaI | AGTACT | 2 cut(s) | 980, 1576 |
| SchI | GAGTC | 3 cut(s) | 114, 465, 515 |
| ScrFI | CCNGG | 6 cut(s) | 300, 320, 1311, 1920, 1937, 2060 |
| SduI | GDGCHC | 3 cut(s) | 434, 904, 1192 |
| SfaNI | GCATC | 3 cut(s) | 183, 1349, 1449 |
| SinI | GGWCC | 1 cut(s) | 548 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 700, 879 |
| SmlI | CTYRAG | 1 cut(s) | 555 |
| SmoI | CTYRAG | 1 cut(s) | 555 |
| SseBI | AGGCCT | 2 cut(s) | 2162, 2407 |
| SsiI | CCGC | 4 cut(s) | 1256, 1292, 1425, 2081 |
| SspI | AATATT | 3 cut(s) | 929, 1498, 2437 |
| SspMI | CTAG | 6 cut(s) | 177, 243, 1512, 1713, 1992, 2467 |
| StuI | AGGCCT | 2 cut(s) | 2162, 2407 |
| StyD4I | CCNGG | 6 cut(s) | 298, 318, 1309, 1918, 1935, 2058 |
| StyI | CCWWGG | 4 cut(s) | 159, 760, 1343, 1827 |
| TaaI | ACNGT | 3 cut(s) | 839, 983, 1322 |
| TaqI | TCGA | 2 cut(s) | 561, 2400 |
| TatI | WGTACW | 3 cut(s) | 978, 1574, 1951 |
| TauI | GCSGC | 1 cut(s) | 2084 |
| TfiI | GAWTC | 9 cut(s) | 150, 1031, 1128, 1181, 1205, 1273, 1454, 1672, 2095 |
| Tru1I | TTAA | 7 cut(s) | 144, 834, 858, 1014, 1632, 2433, 2451 |
| Tru9I | TTAA | 7 cut(s) | 144, 834, 858, 1014, 1632, 2433, 2451 |
| TscAI | CASTG | 6 cut(s) | 736, 844, 1236, 1488, 1890, 2323 |
| TseI | GCWGC | 3 cut(s) | 808, 1389, 2078 |
| TspDTI | ATGAA | 8 cut(s) | 225, 581, 660, 1016, 1044, 1455, 1629, 1772 |
| TspRI | CASTG | 6 cut(s) | 736, 844, 1236, 1488, 1890, 2323 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 914, 1235 |
| VpaK11BI | GGWCC | 1 cut(s) | 548 |
| XapI | RAATTY | 6 cut(s) | 257, 371, 540, 569, 627, 1655 |
| XceI | RCATGY | 1 cut(s) | 1868 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 590 |
| XmnI | GAANNNNTTC | 2 cut(s) | 569, 1905 |
| XspI | CTAG | 6 cut(s) | 177, 243, 1512, 1713, 1992, 2467 |
| ZrmI | AGTACT | 2 cut(s) | 980, 1576 |