Rorug04G0022400

Pre-mRNA-splicing factor ATP-dependent RNA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000671
Physical Location & Seq
Reverse (-)
3183067 .. 3184442
1376 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0022400.1

Sequence Viewer

Length: 1221 bp
ATGTCCAAAGCTACCAGCCTGCATCCATTAACGGCTTCAAAGCTGATCAAAAAAAGCCTCACTCAGCTAGTGAAGGAGAAAAATCTCAACCAGCTTCTGAAGCTGGGAGGGGTTGAAGAAGTGGCATCAGCTCTCAAAACTGACGCAGTGCACGGAATTAATGGTGATGATGTCGACATCGCCTCCAGGCATGAAGCATTTGGTTCCAACACATACAAGAAACCGCCAACGCAAGGATTCCTCCATTTTGTGTGGGAAGCCTTCAAAGACCTCACGATCCTAATCCTCTTGGAATGTGCTACGCTTTCACTTGGTTTCAGCATCAAAGAGCATGGATTGAAAGAAGACAGAGCAGACAGTTTGACAAGCAGTTTCGTCAGCAACAATCTCCAGATTGAGGCTGTGAGAAATGGAAGGCGCCAACTGATTTCAATATTCGAAATTGTGGTCGGTGACGTCATCTGCTTGAAAATTGGAGATCAAGTTCCAGCAGATGGATTGCTTTTAGATGGCCACTCTTTATCAGTAGATGAATCAAGCATGACAGGGGAGAGTGACCATGTTGAGATAAGGGTCACGGAGAATCCTTTCTTGTTCTATGGGACTAAAATCGCTAATGGTTATGGTCGCATGCTTGTCACGTCAGTTGGGATGAACACGAACTGGGGTGAAATGATGAGCCAAATCAGCCAAGACACCAGTGAAAAGACACCTCTGCAAGCACGTGTAGACAAGCTATCATCGTCGATGGGTAAAGGTGGTTTGGCAGTTGCTTTCTTTGTTCTTGTAGTCATGTTGGTCCAGTACTTCACAGGGAATACAGAGGATGAGAATGGAAACAAAGAATACAGTGGCAGCAAGACAAAATCTGATGGCATAATAAACGCCGTCTTTGGGATTGTAGCAGCTGCAGTTACAATTGTTGAGGTGGCAATTCCAGAAGGTCTACCATTAGCTGTGACTATCACTTTTGCTTATTCCATGAAGAGAATGATGGTTGATAATGCAATGGTCCGGAAGCTCTCTGCTTGTGAGACCATGAGATCTGCTACAACAATTTGTACCGACAAAACAGGTACTCTGACCATAAACCAGATGAAGGTAACCAAGTTTTGGTTGGGGAAAGAATCTGTGGAAGAAGAAGCTTATTCATCTATTTCTCCTTACGTTCTCAACTTGATCCAAGAAGGGGTTTCTCTCAACACAACTGTACAGGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
DEAD HA2 Helicase_C OB_NTP_bind S1

Protein Analysis

406

Amino Acids

44.11

Weight (kDa)

5.51

Isoelectric Point (pI)

24.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 35 - 103 4.5e-13 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 134 - 229 3.5e-20 P-type ATPase actuator domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000671)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G26560
fragaria_vesca FvH4_3g44820 FvH4_4g07500 FvH4_4g07500 FvH4_4g07500 FvH4_4g07850 FvH4_4g07850 FvH4_7g12750
malus_domestica MD09G1231900.v1.1 MD15G1068900.v1.1 MD15G1069000.v1.1 MD16G1254900.v1.1 MD17G1229800.v1.1
prunus_persica Prupe.1G082300_v2.0.a1 Prupe.1G368500_v2.0.a1 Prupe.1G422500_v2.0.a1 Prupe.2G077500_v2.0.a1 Prupe.2G077900_v2.0.a1 Prupe.2G077900_v2.0.a1 Prupe.2G078200_v2.0.a1
pyrus_communis pycom08g06730 pycom09g15120 pycom15g06530 pycom16g21640 pycom17g23220 pycom17g23230 pycom17g23240
rosa_chinensis RchiOBHm_Chr1g0351781 RchiOBHm_Chr4g0400041 RchiOBHm_Chr4g0401121 RchiOBHm_Chr5g0079971 RchiOBHm_Chr5g0081521 RchiOBHm_Chr7g0219091
rosa_laevigata RLG00000009162 RLG00000009217 RLG00000028384 RLG00000036944
rosa_multiflora Rmu_co8434143.1_g000001 Rmu_sc0001909.1_g000017 Rmu_sc0001909.1_g000025 Rmu_sc0001933.1_g000012 Rmu_sc0004005.1_g000001 Rmu_sc0007702.1_g000002 Rmu_sc0010608.1_g000004
rosa_roxburghii Rroxscaffold_1G00002030 Rroxscaffold_4G00303550 Rroxscaffold_5G00345000 Rroxscaffold_5G00345950 Rroxscaffold_5G00345970
rosa_rugosa Rorug01G0221400 Rorug01G0221500 Rorug04G0022300 Rorug04G0022400 Rorug04G0028000 Rorug05G0476900
rosa_samantha Rh1AG235400 Rh1BG205800 Rh1CG220000 Rh1DG232900 Rh2AG475800 Rh2BG083000 Rh2CG085000 Rh4AG097800 Rh4AG105600 Rh4AG109800 Rh4BG095800 Rh4CG107200 Rh4CG114200 Rh4DG092600 Rh4DG097800 Rh5BG553100 Rh5DG563200
rosa_wichuraiana Rw1G020490 Rw4G008160 Rw4G008530 Rw5G049150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 459
AccB1I GGYRCC 1 cut(s) 417
AccB7I CCANNNNNTGG 2 cut(s) 494, 1113
AccI GTMKAC 3 cut(s) 174, 729, 946
AccIII TCCGGA 1 cut(s) 1014
AciI CCGC 1 cut(s) 224
AclWI GGATC 2 cut(s) 271, 1174
AcoI YGGCCR 1 cut(s) 511
AcuI CTGAAG 1 cut(s) 119
AcvI CACGTG 1 cut(s) 725
AcyI GRCGYC 2 cut(s) 418, 456
AfaI GTAC 4 cut(s) 806, 1063, 1078, 1212
AfiI CCNNNNNNNGG 7 cut(s) 233, 397, 494, 894, 1099, 1113, 1189
AflIII ACRYGT 1 cut(s) 724
AgsI TTSAA 6 cut(s) 39, 116, 265, 340, 432, 469
AjiI CACGTC 1 cut(s) 642
AjnI CCWGG 1 cut(s) 185
AloI GAACNNNNNNTCC 2 cut(s) 468, 500
Alw21I GWGCWC 1 cut(s) 153
Alw26I GTCTC 1 cut(s) 1028
Alw44I GTGCAC 1 cut(s) 149
AlwI GGATC 2 cut(s) 271, 1174
AlwNI CAGNNNCTG 1 cut(s) 97
Aor13HI TCCGGA 1 cut(s) 1014
AoxI GGCC 2 cut(s) 511, 1215
ApaLI GTGCAC 1 cut(s) 149
ApeKI GCWGC 3 cut(s) 855, 905, 908
ArsI GACNNNNNNTTYG 2 cut(s) 432, 464
AseI ATTAAT 1 cut(s) 159
Asp700I GAANNNNTTC 1 cut(s) 587
AspLEI GCGC 1 cut(s) 420
AspS9I GGNCC 2 cut(s) 799, 1012
AsuHPI GGTGA 3 cut(s) 176, 464, 680
AsuII TTCGAA 1 cut(s) 438
AvaII GGWCC 2 cut(s) 799, 1012
BaeGI GKGCMC 1 cut(s) 153
BalI TGGCCA 1 cut(s) 513
BanI GGYRCC 1 cut(s) 417
BbrPI CACGTG 1 cut(s) 725
BbsI GAAGAC 1 cut(s) 351
Bbv12I GWGCWC 1 cut(s) 153
BbvI GCAGC 3 cut(s) 867, 895, 917
BccI CCATC 5 cut(s) 488, 503, 742, 866, 988
BceAI ACGGC 2 cut(s) 48, 872
BciT130I CCWGG 1 cut(s) 187
BclI TGATCA 1 cut(s) 45
BcoDI GTCTC 1 cut(s) 1028
BfaI CTAG 2 cut(s) 68, 1219
BfmI CTRYAG 1 cut(s) 909
BfoI RGCGCY 1 cut(s) 421
BglII AGATCT 1 cut(s) 1043
BisI GCNGC 3 cut(s) 856, 906, 909
BlsI GCNGC 3 cut(s) 857, 907, 910
BmcAI AGTACT 1 cut(s) 806
Bme1390I CCNGG 1 cut(s) 187
Bme18I GGWCC 2 cut(s) 799, 1012
BmgBI CACGTC 1 cut(s) 642
BmgT120I GGNCC 2 cut(s) 799, 1012
BmiI GGNNCC 2 cut(s) 205, 419
BmrFI CCNGG 1 cut(s) 187
BmrI ACTGGG 1 cut(s) 673
BmsI GCATC 3 cut(s) 31, 134, 330
BmuI ACTGGG 1 cut(s) 673
BpiI GAAGAC 1 cut(s) 351
BpmI CTGGAG 2 cut(s) 169, 374
Bpu14I TTCGAA 1 cut(s) 438
BsaAI YACGTR 1 cut(s) 725
BsaBI GATNNNNATC 1 cut(s) 281
BsaHI GRCGYC 2 cut(s) 418, 456
BsaI GGTCTC 1 cut(s) 1028
BsaWI WCCGGW 1 cut(s) 1014
BsaXI ACNNNNNCTCC 4 cut(s) 167, 197, 468, 498
Bsc4I CCNNNNNNNGG 7 cut(s) 233, 397, 494, 894, 1099, 1113, 1189
Bse1I ACTGG 3 cut(s) 668, 699, 802
Bse3DI GCAATG 1 cut(s) 1014
Bse8I GATNNNNATC 1 cut(s) 281
BseAI TCCGGA 1 cut(s) 1014
BseBI CCWGG 1 cut(s) 187
BseGI GGATG 3 cut(s) 22, 657, 832
BseJI GATNNNNATC 1 cut(s) 281
BseLI CCNNNNNNNGG 7 cut(s) 233, 397, 494, 894, 1099, 1113, 1189
BseMI GCAATG 1 cut(s) 1014
BseMII CTCAG 1 cut(s) 77
BseNI ACTGG 3 cut(s) 668, 699, 802
BseSI GKGCMC 1 cut(s) 153
BseXI GCAGC 3 cut(s) 867, 895, 917
BseYI CCCAGC 1 cut(s) 103
BshFI GGCC 2 cut(s) 513, 1217
BshNI GGYRCC 1 cut(s) 417
BsiHKAI GWGCWC 1 cut(s) 153
BsiSI CCGG 1 cut(s) 1015
BslFI GGGAC 1 cut(s) 616
BslI CCNNNNNNNGG 7 cut(s) 233, 397, 494, 894, 1099, 1113, 1189
BsmAI GTCTC 1 cut(s) 1028
BsmFI GGGAC 1 cut(s) 616
BsnI GGCC 2 cut(s) 513, 1217
Bso31I GGTCTC 1 cut(s) 1028
Bsp119I TTCGAA 1 cut(s) 438
Bsp1286I GDGCHC 1 cut(s) 153
Bsp13I TCCGGA 1 cut(s) 1014
Bsp1407I TGTACA 1 cut(s) 1210
Bsp143I GATC 5 cut(s) 45, 276, 478, 1043, 1179
BspACI CCGC 1 cut(s) 224
BspANI GGCC 2 cut(s) 513, 1217
BspCNI CTCAG 1 cut(s) 76
BspEI TCCGGA 1 cut(s) 1014
BspLI GGNNCC 2 cut(s) 205, 419
BspMAI CTGCAG 1 cut(s) 913
BspPI GGATC 2 cut(s) 271, 1174
BspT104I TTCGAA 1 cut(s) 438
BspT107I GGYRCC 1 cut(s) 417
BspTNI GGTCTC 1 cut(s) 1028
BsrDI GCAATG 1 cut(s) 1014
BsrGI TGTACA 1 cut(s) 1210
BsrI ACTGG 3 cut(s) 668, 699, 802
BssMI GATC 5 cut(s) 45, 276, 478, 1043, 1179
BssNI GRCGYC 2 cut(s) 418, 456
Bst2UI CCWGG 1 cut(s) 187
Bst4CI ACNGT 3 cut(s) 359, 851, 1210
Bst6I CTCTTC 1 cut(s) 980
BstACI GRCGYC 2 cut(s) 418, 456
BstAUI TGTACA 1 cut(s) 1210
BstBAI YACGTR 1 cut(s) 725
BstBI TTCGAA 1 cut(s) 438
BstC8I GCNNGC 3 cut(s) 20, 632, 720
BstDEI CTNAG 1 cut(s) 63
BstEII GGTNACC 1 cut(s) 1102
BstF5I GGATG 3 cut(s) 22, 657, 832
BstH2I RGCGCY 1 cut(s) 421
BstHHI GCGC 1 cut(s) 420
BstKTI GATC 5 cut(s) 48, 279, 481, 1046, 1182
BstMAI GTCTC 1 cut(s) 1028
BstMBI GATC 5 cut(s) 45, 276, 478, 1043, 1179
BstMWI GCNNNNNNNGC 2 cut(s) 100, 687
BstNI CCWGG 1 cut(s) 187
BstNSI RCATGY 1 cut(s) 634
BstPI GGTNACC 1 cut(s) 1102
BstSCI CCNGG 1 cut(s) 185
BstSFI CTRYAG 1 cut(s) 909
BstSLI GKGCMC 1 cut(s) 153
BstV1I GCAGC 3 cut(s) 867, 895, 917
BstV2I GAAGAC 1 cut(s) 351
BstX2I RGATCY 1 cut(s) 1043
BstYI RGATCY 1 cut(s) 1043
BsuRI GGCC 2 cut(s) 513, 1217
BtgZI GCGATG 1 cut(s) 163
BtrI CACGTC 1 cut(s) 642
BtsCI GGATG 3 cut(s) 22, 657, 832
BtsI GCAGTG 1 cut(s) 153
BtsIMutI CAGTG 3 cut(s) 153, 706, 856
Cac8I GCNNGC 3 cut(s) 20, 632, 720
CaiI CAGNNNCTG 1 cut(s) 97
CfoI GCGC 1 cut(s) 420
Cfr13I GGNCC 2 cut(s) 799, 1012
CseI GACGC 1 cut(s) 152
Csp6I GTAC 4 cut(s) 805, 1062, 1077, 1211
CviAII CATG 8 cut(s) 191, 332, 541, 560, 631, 793, 982, 1039
CviQI GTAC 4 cut(s) 805, 1062, 1077, 1211
DdeI CTNAG 1 cut(s) 63
DinI GGCGCC 1 cut(s) 419
DpnI GATC 5 cut(s) 47, 278, 480, 1045, 1181
DpnII GATC 5 cut(s) 45, 276, 478, 1043, 1179
EaeI YGGCCR 1 cut(s) 511
Eam1104I CTCTTC 1 cut(s) 980
EarI CTCTTC 1 cut(s) 980
Eco147I AGGCCT 1 cut(s) 1217
Eco31I GGTCTC 1 cut(s) 1028
Eco47I GGWCC 2 cut(s) 799, 1012
Eco57I CTGAAG 1 cut(s) 119
Eco72I CACGTG 1 cut(s) 725
Eco91I GGTNACC 1 cut(s) 1102
EcoO65I GGTNACC 1 cut(s) 1102
EcoRII CCWGG 1 cut(s) 185
EgeI GGCGCC 1 cut(s) 419
EheI GGCGCC 1 cut(s) 419
FaeI CATG 8 cut(s) 194, 335, 544, 563, 634, 796, 985, 1042
FaqI GGGAC 1 cut(s) 616
FatI CATG 8 cut(s) 190, 331, 540, 559, 630, 792, 981, 1038
FbaI TGATCA 1 cut(s) 45
FblI GTMKAC 3 cut(s) 174, 729, 946
Fnu4HI GCNGC 3 cut(s) 856, 906, 909
FokI GGATG 3 cut(s) 9, 664, 839
Fsp4HI GCNGC 3 cut(s) 856, 906, 909
FspBI CTAG 2 cut(s) 68, 1219
GlaI GCGC 1 cut(s) 419
GluI GCNGC 3 cut(s) 856, 906, 909
GsaI CCCAGC 1 cut(s) 107
GsuI CTGGAG 2 cut(s) 169, 374
HaeII RGCGCY 1 cut(s) 421
HaeIII GGCC 2 cut(s) 513, 1217
HapII CCGG 1 cut(s) 1015
HgaI GACGC 1 cut(s) 152
HhaI GCGC 1 cut(s) 420
Hin1I GRCGYC 2 cut(s) 418, 456
Hin1II CATG 8 cut(s) 194, 335, 544, 563, 634, 796, 985, 1042
Hin6I GCGC 1 cut(s) 418
HinP1I GCGC 1 cut(s) 418
HincII GTYRAC 1 cut(s) 175
HindII GTYRAC 1 cut(s) 175
HindIII AAGCTT 1 cut(s) 1143
HinfI GANTC 4 cut(s) 237, 533, 583, 1127
HpaII CCGG 1 cut(s) 1015
HphI GGTGA 3 cut(s) 176, 464, 680
Hpy166II GTNNAC 4 cut(s) 151, 175, 730, 947
Hpy188I TCNGA 3 cut(s) 99, 871, 1083
Hpy188III TCNNGA 4 cut(s) 274, 391, 938, 1015
Hpy8I GTNNAC 4 cut(s) 151, 175, 730, 947
Hpy99I CGWCG 1 cut(s) 748
HpyAV CCTTC 6 cut(s) 67, 271, 408, 935, 1093, 1181
HpyCH4III ACNGT 3 cut(s) 359, 851, 1210
HpyCH4IV ACGT 4 cut(s) 456, 641, 724, 1167
HpyCH4V TGCA 5 cut(s) 22, 151, 718, 911, 1007
HpyF10VI GCNNNNNNNGC 2 cut(s) 100, 687
HpyF3I CTNAG 1 cut(s) 63
HpySE526I ACGT 4 cut(s) 456, 641, 724, 1167
Hsp92I GRCGYC 2 cut(s) 418, 456
Hsp92II CATG 8 cut(s) 194, 335, 544, 563, 634, 796, 985, 1042
HspAI GCGC 1 cut(s) 418
KasI GGCGCC 1 cut(s) 417
Kpn2I TCCGGA 1 cut(s) 1014
Ksp22I TGATCA 1 cut(s) 45
Kzo9I GATC 5 cut(s) 45, 276, 478, 1043, 1179
Lsp1109I GCAGC 3 cut(s) 867, 895, 917
LweI GCATC 3 cut(s) 31, 134, 330
MaeI CTAG 2 cut(s) 68, 1219
MaeII ACGT 4 cut(s) 456, 641, 724, 1167
MaeIII GTNAC 7 cut(s) 452, 554, 574, 637, 913, 958, 1102
MalI GATC 5 cut(s) 47, 278, 480, 1045, 1181
MboI GATC 5 cut(s) 45, 276, 478, 1043, 1179
MboII GAAGA 5 cut(s) 128, 356, 997, 1148, 1151
MfeI CAATTG 1 cut(s) 918
MflI RGATCY 1 cut(s) 1043
MhlI GDGCHC 1 cut(s) 153
MlsI TGGCCA 1 cut(s) 513
MluCI AATT 6 cut(s) 156, 441, 471, 918, 933, 1056
MluNI TGGCCA 1 cut(s) 513
Mly113I GGCGCC 1 cut(s) 418
MmeI TCCRAC 1 cut(s) 231
Mox20I TGGCCA 1 cut(s) 513
MroI TCCGGA 1 cut(s) 1014
MroXI GAANNNNTTC 1 cut(s) 587
MscI TGGCCA 1 cut(s) 513
MseI TTAA 2 cut(s) 29, 159
Msp20I TGGCCA 1 cut(s) 513
MspA1I CMGCKG 1 cut(s) 908
MspI CCGG 1 cut(s) 1015
MspR9I CCNGG 1 cut(s) 187
MunI CAATTG 1 cut(s) 918
MvaI CCWGG 1 cut(s) 187
MwoI GCNNNNNNNGC 2 cut(s) 100, 687
NarI GGCGCC 1 cut(s) 418
NdeII GATC 5 cut(s) 45, 276, 478, 1043, 1179
NlaIII CATG 8 cut(s) 194, 335, 544, 563, 634, 796, 985, 1042
NlaIV GGNNCC 2 cut(s) 205, 419
NmuCI GTSAC 5 cut(s) 452, 554, 574, 637, 958
NspI RCATGY 1 cut(s) 634
NspV TTCGAA 1 cut(s) 438
PaeI GCATGC 1 cut(s) 634
PceI AGGCCT 1 cut(s) 1217
PdmI GAANNNNTTC 1 cut(s) 587
PfeI GAWTC 4 cut(s) 237, 533, 583, 1127
PflMI CCANNNNNTGG 2 cut(s) 494, 1113
PkrI GCNGC 3 cut(s) 857, 907, 910
PluTI GGCGCC 1 cut(s) 421
PmaCI CACGTG 1 cut(s) 725
PmlI CACGTG 1 cut(s) 725
Ppu21I YACGTR 1 cut(s) 725
PshBI ATTAAT 1 cut(s) 159
Psp6I CCWGG 1 cut(s) 185
PspCI CACGTG 1 cut(s) 725
PspEI GGTNACC 1 cut(s) 1102
PspFI CCCAGC 1 cut(s) 103
PspGI CCWGG 1 cut(s) 185
PspN4I GGNNCC 2 cut(s) 205, 419
PspPI GGNCC 2 cut(s) 799, 1012
PstI CTGCAG 1 cut(s) 913
PstNI CAGNNNCTG 1 cut(s) 97
PsuI RGATCY 1 cut(s) 1043
PvuII CAGCTG 1 cut(s) 908
RsaI GTAC 4 cut(s) 806, 1063, 1078, 1212
RsaNI GTAC 4 cut(s) 805, 1062, 1077, 1211
SalI GTCGAC 1 cut(s) 173
SaqAI TTAA 2 cut(s) 29, 159
SatI GCNGC 3 cut(s) 856, 906, 909
Sau3AI GATC 5 cut(s) 45, 276, 478, 1043, 1179
Sau96I GGNCC 2 cut(s) 799, 1012
ScaI AGTACT 1 cut(s) 806
ScrFI CCNGG 1 cut(s) 187
SduI GDGCHC 1 cut(s) 153
SfaNI GCATC 3 cut(s) 31, 134, 330
SfcI CTRYAG 1 cut(s) 909
SfoI GGCGCC 1 cut(s) 419
SfuI TTCGAA 1 cut(s) 438
SinI GGWCC 2 cut(s) 799, 1012
SphI GCATGC 1 cut(s) 634
Sse9I AATT 6 cut(s) 156, 441, 471, 918, 933, 1056
SseBI AGGCCT 1 cut(s) 1217
SsiI CCGC 1 cut(s) 224
SspDI GGCGCC 1 cut(s) 417
SspI AATATT 1 cut(s) 435
SspMI CTAG 2 cut(s) 68, 1219
StuI AGGCCT 1 cut(s) 1217
StyD4I CCNGG 1 cut(s) 185
TaaI ACNGT 3 cut(s) 359, 851, 1210
TaiI ACGT 4 cut(s) 459, 644, 727, 1170
TaqI TCGA 3 cut(s) 174, 438, 746
TasI AATT 6 cut(s) 156, 441, 471, 918, 933, 1056
TatI WGTACW 2 cut(s) 804, 1210
TfiI GAWTC 4 cut(s) 237, 533, 583, 1127
Tru1I TTAA 2 cut(s) 29, 159
Tru9I TTAA 2 cut(s) 29, 159
TscAI CASTG 3 cut(s) 153, 706, 856
TseFI GTSAC 5 cut(s) 452, 554, 574, 637, 958
TseI GCWGC 3 cut(s) 855, 905, 908
Tsp45I GTSAC 5 cut(s) 452, 554, 574, 637, 958
TspDTI ATGAA 6 cut(s) 207, 546, 668, 998, 1112, 1140
TspGWI ACGGA 2 cut(s) 168, 593
TspRI CASTG 3 cut(s) 153, 706, 856
Van91I CCANNNNNTGG 2 cut(s) 494, 1113
VneI GTGCAC 1 cut(s) 149
VpaK11BI GGWCC 2 cut(s) 799, 1012
VspI ATTAAT 1 cut(s) 159
XceI RCATGY 1 cut(s) 634
XcmI CCANNNNNNNNNTGG 1 cut(s) 1114
XmiI GTMKAC 3 cut(s) 174, 729, 946
XmnI GAANNNNTTC 1 cut(s) 587
XspI CTAG 2 cut(s) 68, 1219
ZraI GACGTC 1 cut(s) 457
ZrmI AGTACT 1 cut(s) 806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.