Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0000671

Physical Location & Seq

Genomic Coordinates Reverse (-)

4756766 .. 4758480

Gene Structure 1715 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1068900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGTCTGTGGCCAAGAGGGTTGCTGAGGAGTTTGGTTGTCGGTTGGGGGAGGAAGTTGGCTATTCCATTCGTTTCGAGGATTGCACTGGACCAGAAACCGTCATCAAGTACATGACGGATGGAATGCTGCTGAGGGAGATTTTGATTGATAAGGACCTTTCTCAATACTCTGTGGTCATGCTTGACGAAGCTCACGAGAGAACAGTCCACACAGACGTTCTTTTTGGATTACTCAAGCCGCTATTGAAGCGAAGGCCAGATTTTCGCTTGATTTTGGACATTCCCTATCCCTGGAAGAACTTATCCTGTGAAGGTATTTTACACGAATCAACCAGTGATTACCTTGACGCAGCTCTAATCACCGTCCTACAAATCCACTTATCCGAACCTGAAGGCGACATCCTTCTCTTCTTGACTGGACAAGAAGAGATTGATTTTGCATGCCAGTCTCTCCATGAGAGGACTAAAGGTCTTGGTAGAAACGTCCCCGAGTTGATTATTTTACCGGTGTATAGTGCGCTTCCTAGTGAAATCCAGTCGAGGATATTTGATCCTGCTCCCCAAGGGAAGAAGAAAGTAGTTGTGGCTACTAATATCGCTGAGACATCACTGACCATTGATGGGATATATTATGTGATCGATCCTGGTTTTGCAAAGCAAAATGTTTTTAACCCGAAGCTGGGGCTAGACTCATTGGTCATAACCCCGATTTCACAAGCATCCGCCAACCAGCGAAAAGGGAGAGCTGGTCGTACAGGCCCTGGGAAATGTTTCCGCCTCTACACGGAAAGCGCATACCTCAACGAGATGCTCCCTACTACAACACCAGAAATTCAGAGGATAAATCTTGGGTTTACTGCACTTACGATGAAAGCTATGGGGATGAATGATCTCTTGACTTTTGATTTTATGGATCCTCCTCCTCGCCAAGCTCTTGTTTCTGCCATGGAACAGCTGTACAAATTGGGGGCACTTGATGAGGAGGGGCTGCTGACTAAATTGGGTAGAAAAATGGCCGAGTTTCCTCTGGATCCACCCTTATCAAAGATGCTACTCGCTAGCGTGGACCTCGGATGCAGCGATGAGATCTTGACCATCATTGCAATGATTCAGACAGGCAATATCTTTTACAGACCAAGAGAAAAGCAAGCCAAGGCTGATCAGAAGCGAGCCAATTTTTTTCAGGCAGAGGGAGATCCTCTGACTTTACTCGCAGTCTATGAGGCTTGGAAAGAAAGCAATTTTTCGGGGCCATGGTGTTTCGAGAAGTTTGTTCAGTCTCGCTCCTTGAGGCGGGCACTAGACGTCAGAAAACAGCTTCTGAGCATTATGGATAAGTACAAACTCGATGTTCTGAGTGCAGGAAGGAATTTTACGAAGATCAGGAAGGCGATTACAGCAGGGTTTTTCTTCCATGCTGCTAGAAAGGACCCGCAGGAGGGTTACAGAAACCTGACAGAGAACCAGCCAGTTTATATCCATCCAAGCAGTGCCCTTTTCCAGAGACAGCCGGATTGGGTCATCTACCATGAGCTGGTTATGACCACGAAGGAGTACATGCGCGAGGTGACAGTCATCGACCCCAAATGGCTTGTGGAACTGGCGCCCATGTCCTTCAAATTTTCAGATCCTTCAAAGATGAGTAAGCGCCAGCGTCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0005739 GO:0005829 GO:0005911 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009506 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030054 GO:0032991 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0055044 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind S1

Protein Analysis

554

Amino Acids

62.74

Weight (kDa)

6.51

Isoelectric Point (pI)

45.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Helicase_C	PF00271	122 - 253	8.3e-12	Helicase conserved C-terminal domain
WHD_HA2	PF04408	315 - 343	6e-11	Helicase associated domain (HA2), winged-helix
HA2_C	PF21010	344 - 403	4.8e-14	Helicase associated domain (HA2), ratchet-like
OB_NTP_bind	PF07717	461 - 536	7e-27	Oligonucleotide/oligosaccharide-binding (OB)-fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000671)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26560
fragaria_vesca	FvH4_3g44820 FvH4_4g07500 FvH4_4g07500 FvH4_4g07500 FvH4_4g07850 FvH4_4g07850 FvH4_7g12750
malus_domestica	MD09G1231900.v1.1 MD15G1068900.v1.1 MD15G1069000.v1.1 MD16G1254900.v1.1 MD17G1229800.v1.1
prunus_persica	Prupe.1G082300_v2.0.a1 Prupe.1G368500_v2.0.a1 Prupe.1G422500_v2.0.a1 Prupe.2G077500_v2.0.a1 Prupe.2G077900_v2.0.a1 Prupe.2G077900_v2.0.a1 Prupe.2G078200_v2.0.a1
pyrus_communis	pycom08g06730 pycom09g15120 pycom15g06530 pycom16g21640 pycom17g23220 pycom17g23230 pycom17g23240
rosa_chinensis	RchiOBHm_Chr1g0351781 RchiOBHm_Chr4g0400041 RchiOBHm_Chr4g0401121 RchiOBHm_Chr5g0079971 RchiOBHm_Chr5g0081521 RchiOBHm_Chr7g0219091
rosa_laevigata	RLG00000009162 RLG00000009217 RLG00000028384 RLG00000036944
rosa_multiflora	Rmu_co8434143.1_g000001 Rmu_sc0001909.1_g000017 Rmu_sc0001909.1_g000025 Rmu_sc0001933.1_g000012 Rmu_sc0004005.1_g000001 Rmu_sc0007702.1_g000002 Rmu_sc0010608.1_g000004
rosa_roxburghii	Rroxscaffold_1G00002030 Rroxscaffold_4G00303550 Rroxscaffold_5G00345000 Rroxscaffold_5G00345950 Rroxscaffold_5G00345970
rosa_rugosa	Rorug01G0221400 Rorug01G0221500 Rorug04G0022300 Rorug04G0022400 Rorug04G0028000 Rorug05G0476900
rosa_samantha	Rh1AG235400 Rh1BG205800 Rh1CG220000 Rh1DG232900 Rh2AG475800 Rh2BG083000 Rh2CG085000 Rh4AG097800 Rh4AG105600 Rh4AG109800 Rh4BG095800 Rh4CG107200 Rh4CG114200 Rh4DG092600 Rh4DG097800 Rh5BG553100 Rh5DG563200
rosa_wichuraiana	Rw1G020490 Rw4G008160 Rw4G008530 Rw5G049150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	695
AatII	GACGTC	1 cut(s)	1308
AccB1I	GGYRCC	1 cut(s)	1603
AccB7I	CCANNNNNTGG	1 cut(s)	1534
AccII	CGCG	1 cut(s)	1563
AciI	CCGC	5 cut(s)	239, 723, 775, 1294, 1433
AclWI	GGATC	8 cut(s)	545, 635, 908, 921, 1025, 1038, 1190, 1622
AcoI	YGGCCR	2 cut(s)	9, 1014
AcsI	RAATTY	3 cut(s)	831, 1369, 1619
AcuI	CTGAAG	1 cut(s)	411
AcyI	GRCGYC	2 cut(s)	1305, 1604
AfaI	GTAC	5 cut(s)	110, 754, 959, 1340, 1556
AfiI	CCNNNNNNNGG	9 cut(s)	291, 621, 679, 680, 784, 1293, 1438, 1439, 1534
AgeI	ACCGGT	1 cut(s)	505
AgsI	TTSAA	3 cut(s)	247, 1618, 1635
AhdI	GACNNNNNGTC	1 cut(s)	468
AjnI	CCWGG	3 cut(s)	290, 643, 760
AluBI	AGCT	9 cut(s)	191, 353, 679, 746, 875, 932, 955, 1318, 1534
AluI	AGCT	9 cut(s)	191, 353, 679, 746, 875, 932, 955, 1318, 1534
Alw26I	GTCTC	4 cut(s)	453, 596, 1284, 1498
AlwI	GGATC	8 cut(s)	545, 635, 908, 921, 1025, 1038, 1190, 1622
AlwNI	CAGNNNCTG	2 cut(s)	761, 1321
Ama87I	CYCGRG	1 cut(s)	488
AoxI	GGCC	5 cut(s)	9, 254, 757, 1014, 1250
ApeKI	GCWGC	5 cut(s)	127, 350, 988, 1077, 1418
ApoI	RAATTY	3 cut(s)	831, 1369, 1619
ArsI	GACNNNNNNTTYG	2 cut(s)	206, 238
AsiGI	ACCGGT	1 cut(s)	505
Asp700I	GAANNNNTTC	1 cut(s)	770
AspLEI	GCGC	5 cut(s)	520, 794, 1563, 1606, 1650
AspS9I	GGNCC	6 cut(s)	89, 154, 758, 1066, 1250, 1429
AsuHPI	GGTGA	2 cut(s)	352, 1579
AsuNHI	GCTAGC	1 cut(s)	1058
AvaI	CYCGRG	1 cut(s)	488
AvaII	GGWCC	4 cut(s)	89, 154, 1066, 1429
BaeGI	GKGCMC	3 cut(s)	973, 1300, 1495
BalI	TGGCCA	1 cut(s)	11
BamHI	GGATCC	2 cut(s)	913, 1030
BanI	GGYRCC	1 cut(s)	1603
BarI	GAAGNNNNNNTAC	4 cut(s)	303, 335, 1357, 1389
BauI	CACGAG	1 cut(s)	194
BbvCI	CCTCAGC	2 cut(s)	24, 131
BbvI	GCAGC	5 cut(s)	114, 362, 975, 1089, 1405
BccI	CCATC	4 cut(s)	113, 614, 1103, 1488
BciT130I	CCWGG	3 cut(s)	292, 645, 762
BclI	TGATCA	1 cut(s)	1159
BcoDI	GTCTC	4 cut(s)	453, 596, 1284, 1498
BfaI	CTAG	5 cut(s)	525, 686, 1059, 1301, 1422
BfoI	RGCGCY	2 cut(s)	1607, 1651
BglII	AGATCT	1 cut(s)	1086
BisI	GCNGC	6 cut(s)	128, 239, 351, 989, 1078, 1419
BlsI	GCNGC	6 cut(s)	129, 240, 352, 990, 1079, 1420
Bme1390I	CCNGG	3 cut(s)	292, 645, 762
Bme18I	GGWCC	4 cut(s)	89, 154, 1066, 1429
BmeRI	GACNNNNNGTC	1 cut(s)	468
BmeT110I	CYCGRG	1 cut(s)	488
BmgT120I	GGNCC	6 cut(s)	89, 154, 758, 1066, 1250, 1429
BmiI	GGNNCC	5 cut(s)	915, 1032, 1251, 1431, 1605
BmrFI	CCNGG	3 cut(s)	292, 645, 762
BmsI	GCATC	4 cut(s)	728, 798, 1038, 1064
BmtI	GCTAGC	1 cut(s)	1062
Bpu10I	CCTNAGC	2 cut(s)	24, 131
BpuEI	CTTGAG	2 cut(s)	218, 1309
Bsa29I	ATCGAT	1 cut(s)	639
BsaHI	GRCGYC	2 cut(s)	1305, 1604
BsaJI	CCNNGG	8 cut(s)	290, 562, 760, 761, 945, 1069, 1152, 1253
BsaWI	WCCGGW	1 cut(s)	505
BsaXI	ACNNNNNCTCC	2 cut(s)	733, 763
Bsc4I	CCNNNNNNNGG	9 cut(s)	291, 621, 679, 680, 784, 1293, 1438, 1439, 1534
Bse118I	RCCGGY	1 cut(s)	505
Bse1I	ACTGG	7 cut(s)	91, 333, 421, 445, 535, 1469, 1605
Bse3DI	GCAATG	2 cut(s)	1098, 1110
BseBI	CCWGG	3 cut(s)	292, 645, 762
BseCI	ATCGAT	1 cut(s)	639
BseDI	CCNNGG	8 cut(s)	290, 562, 760, 761, 945, 1069, 1152, 1253
BseGI	GGATG	6 cut(s)	124, 399, 719, 888, 1079, 1480
BseLI	CCNNNNNNNGG	9 cut(s)	291, 621, 679, 680, 784, 1293, 1438, 1439, 1534
BseMI	GCAATG	2 cut(s)	1098, 1110
BseMII	CTCAG	5 cut(s)	15, 122, 591, 1313, 1346
BseNI	ACTGG	7 cut(s)	91, 333, 421, 445, 535, 1469, 1605
BseRI	GAGGAG	4 cut(s)	41, 909, 912, 995
BseSI	GKGCMC	3 cut(s)	973, 1300, 1495
BseXI	GCAGC	5 cut(s)	114, 362, 975, 1089, 1405
BseYI	CCCAGC	1 cut(s)	679
BsgI	GTGCAG	2 cut(s)	843, 1380
Bsh1236I	CGCG	1 cut(s)	1563
BshFI	GGCC	5 cut(s)	11, 256, 759, 1016, 1252
BshNI	GGYRCC	1 cut(s)	1603
BshTI	ACCGGT	1 cut(s)	505
BshVI	ATCGAT	1 cut(s)	639
BsiHKCI	CYCGRG	1 cut(s)	488
BsiSI	CCGG	2 cut(s)	506, 1511
BslFI	GGGAC	1 cut(s)	470
BslI	CCNNNNNNNGG	9 cut(s)	291, 621, 679, 680, 784, 1293, 1438, 1439, 1534
BsmAI	GTCTC	4 cut(s)	453, 596, 1284, 1498
BsmFI	GGGAC	1 cut(s)	470
BsmI	GAATGC	1 cut(s)	129
BsnI	GGCC	5 cut(s)	11, 256, 759, 1016, 1252
BsoBI	CYCGRG	1 cut(s)	488
Bsp1286I	GDGCHC	3 cut(s)	973, 1300, 1495
Bsp1407I	TGTACA	1 cut(s)	957
Bsp19I	CCATGG	2 cut(s)	945, 1253
BspACI	CCGC	5 cut(s)	239, 723, 775, 1294, 1433
BspANI	GGCC	5 cut(s)	11, 256, 759, 1016, 1252
BspCNI	CTCAG	5 cut(s)	16, 123, 592, 1314, 1347
BspDI	ATCGAT	1 cut(s)	639
BspFNI	CGCG	1 cut(s)	1563
BspLI	GGNNCC	5 cut(s)	915, 1032, 1251, 1431, 1605
BspOI	GCTAGC	1 cut(s)	1062
BspPI	GGATC	8 cut(s)	545, 635, 908, 921, 1025, 1038, 1190, 1622
BspT107I	GGYRCC	1 cut(s)	1603
BsrDI	GCAATG	2 cut(s)	1098, 1110
BsrFI	RCCGGY	1 cut(s)	505
BsrGI	TGTACA	1 cut(s)	957
BsrI	ACTGG	7 cut(s)	91, 333, 421, 445, 535, 1469, 1605
BssAI	RCCGGY	1 cut(s)	505
BssECI	CCNNGG	8 cut(s)	290, 562, 760, 761, 945, 1069, 1152, 1253
BssNI	GRCGYC	2 cut(s)	1305, 1604
BssSI	CACGAG	1 cut(s)	194
BssT1I	CCWWGG	4 cut(s)	562, 945, 1152, 1253
Bst2BI	CACGAG	1 cut(s)	194
Bst2UI	CCWGG	3 cut(s)	292, 645, 762
Bst4CI	ACNGT	4 cut(s)	100, 205, 364, 1573
Bst6I	CTCTTC	2 cut(s)	413, 420
BstACI	GRCGYC	2 cut(s)	1305, 1604
BstAUI	TGTACA	1 cut(s)	957
BstC8I	GCNNGC	6 cut(s)	442, 1060, 1149, 1170, 1296, 1652
BstDEI	CTNAG	5 cut(s)	24, 131, 600, 1322, 1355
BstDSI	CCRYGG	2 cut(s)	945, 1253
BstF5I	GGATG	6 cut(s)	124, 399, 719, 888, 1079, 1480
BstFNI	CGCG	1 cut(s)	1563
BstH2I	RGCGCY	2 cut(s)	1607, 1651
BstHHI	GCGC	5 cut(s)	520, 794, 1563, 1606, 1650
BstMAI	GTCTC	4 cut(s)	453, 596, 1284, 1498
BstMWI	GCNNNNNNNGC	2 cut(s)	247, 1397
BstNI	CCWGG	3 cut(s)	292, 645, 762
BstNSI	RCATGY	2 cut(s)	444, 1561
BstSCI	CCNGG	3 cut(s)	290, 643, 760
BstSLI	GKGCMC	3 cut(s)	973, 1300, 1495
BstUI	CGCG	1 cut(s)	1563
BstV1I	GCAGC	5 cut(s)	114, 362, 975, 1089, 1405
BstX2I	RGATCY	5 cut(s)	913, 1030, 1086, 1195, 1627
BstYI	RGATCY	5 cut(s)	913, 1030, 1086, 1195, 1627
Bsu15I	ATCGAT	1 cut(s)	639
BsuRI	GGCC	5 cut(s)	11, 256, 759, 1016, 1252
BsuTUI	ATCGAT	1 cut(s)	639
BtgI	CCRYGG	2 cut(s)	945, 1253
BtgZI	GCGATG	1 cut(s)	1095
BtsCI	GGATG	6 cut(s)	124, 399, 719, 888, 1079, 1480
BtsI	GCAGTG	1 cut(s)	1495
BtsIMutI	CAGTG	4 cut(s)	84, 340, 608, 1495
Cac8I	GCNNGC	6 cut(s)	442, 1060, 1149, 1170, 1296, 1652
CaiI	CAGNNNCTG	2 cut(s)	761, 1321
CfoI	GCGC	5 cut(s)	520, 794, 1563, 1606, 1650
Cfr10I	RCCGGY	1 cut(s)	505
Cfr13I	GGNCC	6 cut(s)	89, 154, 758, 1066, 1250, 1429
ClaI	ATCGAT	1 cut(s)	639
CseI	GACGC	2 cut(s)	356, 1643
Csp6I	GTAC	5 cut(s)	109, 753, 958, 1339, 1555
CspAI	ACCGGT	1 cut(s)	505
CviQI	GTAC	5 cut(s)	109, 753, 958, 1339, 1555
DdeI	CTNAG	5 cut(s)	24, 131, 600, 1322, 1355
DinI	GGCGCC	1 cut(s)	1605
DrdI	GACNNNNNNGTC	1 cut(s)	695
DriI	GACNNNNNGTC	1 cut(s)	468
DseDI	GACNNNNNNGTC	1 cut(s)	695
EaeI	YGGCCR	2 cut(s)	9, 1014
Eam1104I	CTCTTC	2 cut(s)	413, 420
Eam1105I	GACNNNNNGTC	1 cut(s)	468
EarI	CTCTTC	2 cut(s)	413, 420
EciI	GGCGGA	2 cut(s)	712, 764
Eco130I	CCWWGG	4 cut(s)	562, 945, 1152, 1253
Eco47I	GGWCC	4 cut(s)	89, 154, 1066, 1429
Eco57I	CTGAAG	1 cut(s)	411
Eco88I	CYCGRG	1 cut(s)	488
EcoO109I	RGGNCCY	3 cut(s)	154, 758, 1429
EcoRII	CCWGG	3 cut(s)	290, 643, 760
EcoT14I	CCWWGG	4 cut(s)	562, 945, 1152, 1253
EgeI	GGCGCC	1 cut(s)	1605
EheI	GGCGCC	1 cut(s)	1605
ErhI	CCWWGG	4 cut(s)	562, 945, 1152, 1253
FaqI	GGGAC	1 cut(s)	470
FauI	CCCGC	2 cut(s)	1287, 1440
FbaI	TGATCA	1 cut(s)	1159
Fnu4HI	GCNGC	6 cut(s)	128, 239, 351, 989, 1078, 1419
FokI	GGATG	6 cut(s)	131, 386, 706, 895, 1086, 1467
Fsp4HI	GCNGC	6 cut(s)	128, 239, 351, 989, 1078, 1419
FspBI	CTAG	5 cut(s)	525, 686, 1059, 1301, 1422
GlaI	GCGC	5 cut(s)	519, 793, 1562, 1605, 1649
GluI	GCNGC	6 cut(s)	128, 239, 351, 989, 1078, 1419
GsaI	CCCAGC	1 cut(s)	683
HaeII	RGCGCY	2 cut(s)	1607, 1651
HaeIII	GGCC	5 cut(s)	11, 256, 759, 1016, 1252
HapII	CCGG	2 cut(s)	506, 1511
HgaI	GACGC	2 cut(s)	356, 1643
HhaI	GCGC	5 cut(s)	520, 794, 1563, 1606, 1650
Hin1I	GRCGYC	2 cut(s)	1305, 1604
Hin6I	GCGC	5 cut(s)	518, 792, 1561, 1604, 1648
HinP1I	GCGC	5 cut(s)	518, 792, 1561, 1604, 1648
HinfI	GANTC	3 cut(s)	326, 689, 1108
HpaII	CCGG	2 cut(s)	506, 1511
HphI	GGTGA	2 cut(s)	352, 1579
Hpy166II	GTNNAC	3 cut(s)	208, 855, 1066
Hpy188III	TCNNGA	8 cut(s)	194, 412, 895, 1028, 1090, 1264, 1384, 1501
Hpy8I	GTNNAC	3 cut(s)	208, 855, 1066
HpyAV	CCTTC	9 cut(s)	246, 305, 386, 413, 1359, 1381, 1543, 1624, 1641
HpyCH4III	ACNGT	4 cut(s)	100, 205, 364, 1573
HpyCH4IV	ACGT	3 cut(s)	216, 483, 1305
HpyCH4V	TGCA	7 cut(s)	84, 440, 653, 860, 1077, 1103, 1361
HpyF10VI	GCNNNNNNNGC	2 cut(s)	247, 1397
HpyF3I	CTNAG	5 cut(s)	24, 131, 600, 1322, 1355
HpySE526I	ACGT	3 cut(s)	216, 483, 1305
Hsp92I	GRCGYC	2 cut(s)	1305, 1604
HspAI	GCGC	5 cut(s)	518, 792, 1561, 1604, 1648
KasI	GGCGCC	1 cut(s)	1603
Ksp22I	TGATCA	1 cut(s)	1159
LmnI	GCTCC	3 cut(s)	562, 816, 1289
Lsp1109I	GCAGC	5 cut(s)	114, 362, 975, 1089, 1405
LweI	GCATC	4 cut(s)	728, 798, 1038, 1064
MaeI	CTAG	5 cut(s)	525, 686, 1059, 1301, 1422
MaeII	ACGT	3 cut(s)	216, 483, 1305
MaeIII	GTNAC	2 cut(s)	1442, 1567
MboII	GAAGA	7 cut(s)	307, 400, 437, 580, 583, 1390, 1402
MflI	RGATCY	5 cut(s)	913, 1030, 1086, 1195, 1627
MhlI	GDGCHC	3 cut(s)	973, 1300, 1495
MlsI	TGGCCA	1 cut(s)	11
MluCI	AATT	7 cut(s)	831, 962, 998, 1174, 1240, 1369, 1619
MluNI	TGGCCA	1 cut(s)	11
Mly113I	GGCGCC	1 cut(s)	1604
MlyI	GAGTC	1 cut(s)	683
Mox20I	TGGCCA	1 cut(s)	11
MroXI	GAANNNNTTC	1 cut(s)	770
MscI	TGGCCA	1 cut(s)	11
MseI	TTAA	1 cut(s)	669
MslI	CAYNNNNRTG	1 cut(s)	1103
Msp20I	TGGCCA	1 cut(s)	11
MspA1I	CMGCKG	1 cut(s)	955
MspI	CCGG	2 cut(s)	506, 1511
MspR9I	CCNGG	3 cut(s)	292, 645, 762
Mva1269I	GAATGC	1 cut(s)	129
MvaI	CCWGG	3 cut(s)	292, 645, 762
MvnI	CGCG	1 cut(s)	1563
MwoI	GCNNNNNNNGC	2 cut(s)	247, 1397
NarI	GGCGCC	1 cut(s)	1604
NcoI	CCATGG	2 cut(s)	945, 1253
NheI	GCTAGC	1 cut(s)	1058
NlaIV	GGNNCC	5 cut(s)	915, 1032, 1251, 1431, 1605
NmeAIII	GCCGAG	1 cut(s)	1042
NmuCI	GTSAC	1 cut(s)	1567
NspI	RCATGY	2 cut(s)	444, 1561
PaeI	GCATGC	1 cut(s)	444
PasI	CCCWGGG	1 cut(s)	761
PcsI	WCGNNNNNNNCGW	2 cut(s)	192, 1077
PctI	GAATGC	1 cut(s)	129
PdmI	GAANNNNTTC	1 cut(s)	770
PfeI	GAWTC	2 cut(s)	326, 1108
PflMI	CCANNNNNTGG	1 cut(s)	1534
PinAI	ACCGGT	1 cut(s)	505
PkrI	GCNGC	6 cut(s)	129, 240, 352, 990, 1079, 1420
PleI	GAGTC	1 cut(s)	683
PluTI	GGCGCC	1 cut(s)	1607
PpsI	GAGTC	1 cut(s)	683
PpuMI	RGGWCCY	2 cut(s)	154, 1429
Psp5II	RGGWCCY	2 cut(s)	154, 1429
Psp6I	CCWGG	3 cut(s)	290, 643, 760
PspFI	CCCAGC	1 cut(s)	679
PspGI	CCWGG	3 cut(s)	290, 643, 760
PspN4I	GGNNCC	5 cut(s)	915, 1032, 1251, 1431, 1605
PspPI	GGNCC	6 cut(s)	89, 154, 758, 1066, 1250, 1429
PspPPI	RGGWCCY	2 cut(s)	154, 1429
PstNI	CAGNNNCTG	2 cut(s)	761, 1321
PsuI	RGATCY	5 cut(s)	913, 1030, 1086, 1195, 1627
PvuII	CAGCTG	1 cut(s)	955
RsaI	GTAC	5 cut(s)	110, 754, 959, 1340, 1556
RsaNI	GTAC	5 cut(s)	109, 753, 958, 1339, 1555
RseI	CAYNNNNRTG	1 cut(s)	1103
SaqAI	TTAA	1 cut(s)	669
SatI	GCNGC	6 cut(s)	128, 239, 351, 989, 1078, 1419
Sau96I	GGNCC	6 cut(s)	89, 154, 758, 1066, 1250, 1429
SchI	GAGTC	1 cut(s)	683
ScrFI	CCNGG	3 cut(s)	292, 645, 762
SduI	GDGCHC	3 cut(s)	973, 1300, 1495
SfaNI	GCATC	4 cut(s)	728, 798, 1038, 1064
SfoI	GGCGCC	1 cut(s)	1605
SinI	GGWCC	4 cut(s)	89, 154, 1066, 1429
SmiMI	CAYNNNNRTG	1 cut(s)	1103
SmlI	CTYRAG	2 cut(s)	233, 1288
SmoI	CTYRAG	2 cut(s)	233, 1288
SphI	GCATGC	1 cut(s)	444
Sse9I	AATT	7 cut(s)	831, 962, 998, 1174, 1240, 1369, 1619
SsiI	CCGC	5 cut(s)	239, 723, 775, 1294, 1433
SspDI	GGCGCC	1 cut(s)	1603
SspMI	CTAG	5 cut(s)	525, 686, 1059, 1301, 1422
StyD4I	CCNGG	3 cut(s)	290, 643, 760
StyI	CCWWGG	4 cut(s)	562, 945, 1152, 1253
TaaI	ACNGT	4 cut(s)	100, 205, 364, 1573
TaiI	ACGT	3 cut(s)	219, 486, 1308
TaqI	TCGA	6 cut(s)	75, 539, 639, 1263, 1347, 1578
TasI	AATT	7 cut(s)	831, 962, 998, 1174, 1240, 1369, 1619
TatI	WGTACW	4 cut(s)	108, 957, 1338, 1554
TauI	GCSGC	1 cut(s)	241
TfiI	GAWTC	2 cut(s)	326, 1108
Tru1I	TTAA	1 cut(s)	669
Tru9I	TTAA	1 cut(s)	669
TscAI	CASTG	4 cut(s)	91, 340, 615, 1495
TseFI	GTSAC	1 cut(s)	1567
TseI	GCWGC	5 cut(s)	127, 350, 988, 1077, 1418
Tsp45I	GTSAC	1 cut(s)	1567
TspDTI	ATGAA	2 cut(s)	884, 899
TspGWI	ACGGA	2 cut(s)	131, 800
TspRI	CASTG	4 cut(s)	91, 340, 615, 1495
Van91I	CCANNNNNTGG	1 cut(s)	1534
VpaK11BI	GGWCC	4 cut(s)	89, 154, 1066, 1429
XapI	RAATTY	3 cut(s)	831, 1369, 1619
XceI	RCATGY	2 cut(s)	444, 1561
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1591
XmnI	GAANNNNTTC	1 cut(s)	770
XspI	CTAG	5 cut(s)	525, 686, 1059, 1301, 1422
ZraI	GACGTC	1 cut(s)	1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.