MD09G1115700.v1.1
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Forward (+)
8881198 .. 8881939
742 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1115700.v1.1.491

Sequence Viewer

Length: 462 bp
ATGTTAGTCTTTGTCATTTACCCTTCTAACTTGAAATTTGTTATAGGGCCAAATTGCTGCCTCGGTTCTTCAAGCATAAATCTTTTTCTTCGACATACGCCCCAGTCCACTTCGATAAAGAATGCTATGCATCTGTTTCAGATGGTCACAAAGGGAAACATAGCAATGTACGATTATGTTTTTCCAGCAATAAACATTCAGCACTACAATCAGCCTACTCCTCCTGTGTACAACATGGAAAACATCCCGAAAGACGTTCCTCTATTCCTAAGCTATGGAGGGAGAGACCCGCTTTCGAACGTGCTTGATGTGAAGTATTTGCTGGACAACCTCAGAGATCATGACAAGGACAAGCTTGTGGCACAATATACAGCGGAGTACGCTCATATGGATTTTCTTATGGCTGAGAATGCCAACCAAGTTGTGTATGCTCCCCTACTGGATTTCTTCAAGCTCCATTGA

Protein Analysis

154

Amino Acids

17.53

Weight (kDa)

6.26

Isoelectric Point (pI)

42.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000706)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 290, 374
AcsI RAATTY 1 cut(s) 35
AfaI GTAC 3 cut(s) 170, 230, 380
AgsI TTSAA 3 cut(s) 34, 72, 451
AluBI AGCT 3 cut(s) 273, 355, 454
AluI AGCT 3 cut(s) 273, 355, 454
Alw26I GTCTC 1 cut(s) 279
AoxI GGCC 1 cut(s) 47
ApeKI GCWGC 1 cut(s) 57
ApoI RAATTY 1 cut(s) 35
AspS9I GGNCC 1 cut(s) 47
AsuII TTCGAA 1 cut(s) 296
BbvI GCAGC 1 cut(s) 44
BccI CCATC 1 cut(s) 136
BcoDI GTCTC 1 cut(s) 279
BisI GCNGC 1 cut(s) 58
BlsI GCNGC 1 cut(s) 59
BmgT120I GGNCC 1 cut(s) 47
BmrI ACTGGG 1 cut(s) 97
BmsI GCATC 1 cut(s) 139
BmuI ACTGGG 1 cut(s) 97
Bpu10I CCTNAGC 1 cut(s) 269
Bpu14I TTCGAA 1 cut(s) 296
BsaI GGTCTC 1 cut(s) 279
BsaJI CCNNGG 1 cut(s) 61
Bse1I ACTGG 2 cut(s) 103, 444
Bse3DI GCAATG 1 cut(s) 171
BseDI CCNNGG 1 cut(s) 61
BseGI GGATG 1 cut(s) 243
BseMI GCAATG 1 cut(s) 171
BseMII CTCAG 2 cut(s) 346, 396
BseNI ACTGG 2 cut(s) 103, 444
BseRI GAGGAG 1 cut(s) 210
BseXI GCAGC 1 cut(s) 44
BshFI GGCC 1 cut(s) 49
BsmAI GTCTC 1 cut(s) 279
BsmI GAATGC 2 cut(s) 127, 415
BsnI GGCC 1 cut(s) 49
Bso31I GGTCTC 1 cut(s) 279
Bsp119I TTCGAA 1 cut(s) 296
Bsp1407I TGTACA 1 cut(s) 228
Bsp143I GATC 1 cut(s) 337
BspACI CCGC 2 cut(s) 290, 374
BspANI GGCC 1 cut(s) 49
BspCNI CTCAG 2 cut(s) 345, 397
BspHI TCATGA 1 cut(s) 340
BspT104I TTCGAA 1 cut(s) 296
BspTNI GGTCTC 1 cut(s) 279
BsrDI GCAATG 1 cut(s) 171
BsrGI TGTACA 1 cut(s) 228
BsrI ACTGG 2 cut(s) 103, 444
BssECI CCNNGG 1 cut(s) 61
BssMI GATC 1 cut(s) 337
BstAUI TGTACA 1 cut(s) 228
BstBI TTCGAA 1 cut(s) 296
BstDEI CTNAG 3 cut(s) 269, 332, 405
BstF5I GGATG 1 cut(s) 243
BstKTI GATC 1 cut(s) 340
BstMAI GTCTC 1 cut(s) 279
BstMBI GATC 1 cut(s) 337
BstMWI GCNNNNNNNGC 2 cut(s) 380, 410
BstV1I GCAGC 1 cut(s) 44
BsuRI GGCC 1 cut(s) 49
BtsCI GGATG 1 cut(s) 243
CciI TCATGA 1 cut(s) 340
Cfr13I GGNCC 1 cut(s) 47
Csp6I GTAC 3 cut(s) 169, 229, 379
CviAII CATG 2 cut(s) 235, 341
CviJI RGCY 6 cut(s) 49, 214, 273, 355, 404, 454
CviKI_1 RGCY 6 cut(s) 49, 214, 273, 355, 404, 454
CviQI GTAC 3 cut(s) 169, 229, 379
DdeI CTNAG 3 cut(s) 269, 332, 405
DpnI GATC 1 cut(s) 339
DpnII GATC 1 cut(s) 337
Eco31I GGTCTC 1 cut(s) 279
EcoT22I ATGCAT 1 cut(s) 132
FaeI CATG 2 cut(s) 238, 344
FatI CATG 2 cut(s) 234, 340
FauI CCCGC 1 cut(s) 297
FauNDI CATATG 1 cut(s) 387
Fnu4HI GCNGC 1 cut(s) 58
FokI GGATG 1 cut(s) 230
Fsp4HI GCNGC 1 cut(s) 58
GluI GCNGC 1 cut(s) 58
HaeIII GGCC 1 cut(s) 49
Hin1II CATG 2 cut(s) 238, 344
HindIII AAGCTT 1 cut(s) 353
Hpy166II GTNNAC 2 cut(s) 108, 229
Hpy188I TCNGA 2 cut(s) 141, 335
Hpy188III TCNNGA 2 cut(s) 247, 341
Hpy8I GTNNAC 2 cut(s) 108, 229
HpyAV CCTTC 1 cut(s) 33
HpyCH4IV ACGT 2 cut(s) 255, 300
HpyCH4V TGCA 1 cut(s) 130
HpyF10VI GCNNNNNNNGC 2 cut(s) 380, 410
HpyF3I CTNAG 3 cut(s) 269, 332, 405
HpySE526I ACGT 2 cut(s) 255, 300
Hsp92II CATG 2 cut(s) 238, 344
Kzo9I GATC 1 cut(s) 337
LmnI GCTCC 2 cut(s) 436, 459
LpnPI CCDG 5 cut(s) 116, 198, 237, 308, 425
Lsp1109I GCAGC 1 cut(s) 44
LweI GCATC 1 cut(s) 139
MaeII ACGT 2 cut(s) 255, 300
MaeIII GTNAC 1 cut(s) 145
MalI GATC 1 cut(s) 339
MboI GATC 1 cut(s) 337
MboII GAAGA 3 cut(s) 60, 80, 439
MluCI AATT 2 cut(s) 35, 52
MnlI CCTC 5 cut(s) 71, 231, 270, 272, 341
Mph1103I ATGCAT 1 cut(s) 132
MslI CAYNNNNRTG 1 cut(s) 164
MspA1I CMGCKG 1 cut(s) 374
Mva1269I GAATGC 2 cut(s) 127, 415
MwoI GCNNNNNNNGC 2 cut(s) 380, 410
NdeI CATATG 1 cut(s) 387
NdeII GATC 1 cut(s) 337
NlaIII CATG 2 cut(s) 238, 344
NmuCI GTSAC 1 cut(s) 145
NsiI ATGCAT 1 cut(s) 132
NspV TTCGAA 1 cut(s) 296
PagI TCATGA 1 cut(s) 340
PctI GAATGC 2 cut(s) 127, 415
PkrI GCNGC 1 cut(s) 59
PspPI GGNCC 1 cut(s) 47
RsaI GTAC 3 cut(s) 170, 230, 380
RsaNI GTAC 3 cut(s) 169, 229, 379
RseI CAYNNNNRTG 1 cut(s) 164
SatI GCNGC 1 cut(s) 58
Sau3AI GATC 1 cut(s) 337
Sau96I GGNCC 1 cut(s) 47
SetI ASST 6 cut(s) 258, 275, 303, 333, 357, 456
SfaNI GCATC 1 cut(s) 139
SfuI TTCGAA 1 cut(s) 296
SmiMI CAYNNNNRTG 1 cut(s) 164
Sse9I AATT 2 cut(s) 35, 52
SsiI CCGC 2 cut(s) 290, 374
TaiI ACGT 2 cut(s) 258, 303
TaqI TCGA 3 cut(s) 91, 113, 296
TasI AATT 2 cut(s) 35, 52
TatI WGTACW 1 cut(s) 228
TseFI GTSAC 1 cut(s) 145
TseI GCWGC 1 cut(s) 57
Tsp45I GTSAC 1 cut(s) 145
XapI RAATTY 1 cut(s) 35
Zsp2I ATGCAT 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.