Rmu_sc0004191.1_g000065
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004191.1
Physical Location & Seq
Forward (+)
264895 .. 265215
321 bp
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UTR
Exon/CDS
Intron
Rmu_sc0004191.1_g000065.1.cds

Sequence Viewer

Length: 321 bp
atgatcagaagtggaaccataagaaagttcgattacactcttccactcacaaatttgcagcactaccataagtttactcctccagcgtacaacatggcaaatattccaaaagacattcctcttttcctcggctatggagggagagatacactttcggatgtcaacgatgtgaagctttttcttaatgacctcaaagatcatgacaaggacaagcttgtggaacaatacgtagagaagtatgctcatatggatttctttatgggttggaatgccaaacataaagtttatgatcctctcctcactttcttcgggcaacattga

Protein Analysis

106

Amino Acids

12.51

Weight (kDa)

7.01

Isoelectric Point (pI)

35.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000706)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 284
AcsI RAATTY 1 cut(s) 52
AfaI GTAC 1 cut(s) 89
AluBI AGCT 2 cut(s) 175, 214
AluI AGCT 2 cut(s) 175, 214
AlwI GGATC 1 cut(s) 284
ApeKI GCWGC 1 cut(s) 58
ApoI RAATTY 1 cut(s) 52
BbvI GCAGC 1 cut(s) 70
BclI TGATCA 1 cut(s) 3
BisI GCNGC 1 cut(s) 59
BlsI GCNGC 1 cut(s) 60
BmiI GGNNCC 1 cut(s) 16
BpmI CTGGAG 1 cut(s) 66
BsaAI YACGTR 1 cut(s) 229
BsaJI CCNNGG 1 cut(s) 127
BseDI CCNNGG 1 cut(s) 127
BseGI GGATG 1 cut(s) 163
BseRI GAGGAG 2 cut(s) 69, 287
BseXI GCAGC 1 cut(s) 70
BsmI GAATGC 1 cut(s) 274
Bsp143I GATC 3 cut(s) 3, 196, 289
BspHI TCATGA 1 cut(s) 199
BspLI GGNNCC 1 cut(s) 16
BspPI GGATC 1 cut(s) 284
BssECI CCNNGG 1 cut(s) 127
BssMI GATC 3 cut(s) 3, 196, 289
Bst6I CTCTTC 1 cut(s) 45
BstBAI YACGTR 1 cut(s) 229
BstF5I GGATG 1 cut(s) 163
BstKTI GATC 3 cut(s) 6, 199, 292
BstMBI GATC 3 cut(s) 3, 196, 289
BstSNI TACGTA 1 cut(s) 229
BstV1I GCAGC 1 cut(s) 70
BtsCI GGATG 1 cut(s) 163
CciI TCATGA 1 cut(s) 199
Csp6I GTAC 1 cut(s) 88
CviAII CATG 2 cut(s) 94, 200
CviJI RGCY 3 cut(s) 132, 175, 214
CviKI_1 RGCY 3 cut(s) 132, 175, 214
CviQI GTAC 1 cut(s) 88
DpnI GATC 3 cut(s) 5, 198, 291
DpnII GATC 3 cut(s) 3, 196, 289
Eam1104I CTCTTC 1 cut(s) 45
EarI CTCTTC 1 cut(s) 45
Eco105I TACGTA 1 cut(s) 229
FaeI CATG 2 cut(s) 97, 203
FatI CATG 2 cut(s) 93, 199
FauNDI CATATG 1 cut(s) 246
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 1 cut(s) 59
FokI GGATG 1 cut(s) 170
Fsp4HI GCNGC 1 cut(s) 59
GluI GCNGC 1 cut(s) 59
GsuI CTGGAG 1 cut(s) 66
Hin1II CATG 2 cut(s) 97, 203
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HindIII AAGCTT 2 cut(s) 173, 212
Hpy166II GTNNAC 2 cut(s) 75, 163
Hpy188I TCNGA 2 cut(s) 8, 157
Hpy188III TCNNGA 1 cut(s) 200
Hpy8I GTNNAC 2 cut(s) 75, 163
HpyCH4IV ACGT 1 cut(s) 228
HpyCH4V TGCA 1 cut(s) 58
HpySE526I ACGT 1 cut(s) 228
Hsp92II CATG 2 cut(s) 97, 203
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 3 cut(s) 3, 196, 289
LpnPI CCDG 1 cut(s) 96
Lsp1109I GCAGC 1 cut(s) 70
MaeII ACGT 1 cut(s) 228
MalI GATC 3 cut(s) 5, 198, 291
MboI GATC 3 cut(s) 3, 196, 289
MboII GAAGA 2 cut(s) 32, 298
MluCI AATT 1 cut(s) 52
MmeI TCCRAC 1 cut(s) 245
MnlI CCTC 7 cut(s) 90, 129, 131, 137, 200, 303, 308
MseI TTAA 1 cut(s) 183
Mva1269I GAATGC 1 cut(s) 274
NdeI CATATG 1 cut(s) 246
NdeII GATC 3 cut(s) 3, 196, 289
NlaIII CATG 2 cut(s) 97, 203
NlaIV GGNNCC 1 cut(s) 16
NmeAIII GCCGAG 1 cut(s) 108
PagI TCATGA 1 cut(s) 199
PctI GAATGC 1 cut(s) 274
PkrI GCNGC 1 cut(s) 60
Ppu21I YACGTR 1 cut(s) 229
PspN4I GGNNCC 1 cut(s) 16
RsaI GTAC 1 cut(s) 89
RsaNI GTAC 1 cut(s) 88
SaqAI TTAA 1 cut(s) 183
SatI GCNGC 1 cut(s) 59
Sau3AI GATC 3 cut(s) 3, 196, 289
SetI ASST 4 cut(s) 177, 192, 216, 231
SgeI CNNG 7 cut(s) 95, 106, 140, 212, 217, 223, 227
SnaBI TACGTA 1 cut(s) 229
Sse9I AATT 1 cut(s) 52
SspI AATATT 1 cut(s) 103
TaiI ACGT 1 cut(s) 231
TaqI TCGA 1 cut(s) 30
TasI AATT 1 cut(s) 52
Tru1I TTAA 1 cut(s) 183
Tru9I TTAA 1 cut(s) 183
TseI GCWGC 1 cut(s) 58
XapI RAATTY 1 cut(s) 52
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.