pycom17g10030
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
7749075 .. 7750905
1831 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g10030.2

Sequence Viewer

Length: 597 bp
ATGGTTGTTTATGATCTTCCTACTTCAGTCCAGTACGTCCGTGATCAAACAGGACAGAAATTACACTACGTCGGACATTCCATGGGAACTTTGGTTGTCCTCGCCGCCTTCTCGGAGAAAAAGTTGTTTAACTTGCTAAGATCAGCTGCTTTACTTAGCCCGGTTGCTTATCTGGGTCAAATACCCTCACTGATTTTAAGAACTGCTGCCGAAACATTTTTAGCAGAAGTAACACAACTTAATGAACCTTTTTGTTATCATATATGGATCCTTAAAAATCCATTGAAAGGAACCATAGAAATGTACGATTACAGTCGCGCATACATGAACATGGAACATTACAAGAAGCCTACTCCTCCTATGTACAACATGGCAAACATTCCAAAGGACATTCCTCTTTTCCTCAGCTATGGAGGGAGAGATTCAATTTCCGACGTGAATGACGTGGGAGTTTTGCTTGACGACCTCGAAGATCATGATAAGGACAAGCTTGTGGTACAGTACAGAGAGGATTATGCTCATTTGGATTTTATCATGAGTGTGAATGCCAATCAACTTGTGTATAATCCTCTAGAAGCCTTCATCAGGCTTCATTAA

Protein Analysis

199

Amino Acids

22.69

Weight (kDa)

5.58

Isoelectric Point (pI)

40.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000706)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 318
AciI CCGC 1 cut(s) 105
AclWI GGATC 2 cut(s) 262, 275
AcuI CTGAAG 1 cut(s) 9
AfaI GTAC 5 cut(s) 35, 305, 365, 498, 503
AfiI CCNNNNNNNGG 2 cut(s) 287, 585
AgsI TTSAA 2 cut(s) 286, 426
AjiI CACGTC 2 cut(s) 436, 445
AluBI AGCT 3 cut(s) 146, 408, 490
AluI AGCT 3 cut(s) 146, 408, 490
AlwI GGATC 2 cut(s) 262, 275
ApeKI GCWGC 2 cut(s) 146, 206
AspLEI GCGC 1 cut(s) 320
AsuC2I CCSGG 1 cut(s) 161
BamHI GGATCC 1 cut(s) 267
BbvCI CCTCAGC 1 cut(s) 404
BbvI GCAGC 2 cut(s) 133, 193
BclI TGATCA 1 cut(s) 43
BcnI CCSGG 1 cut(s) 161
BfaI CTAG 1 cut(s) 572
BisI GCNGC 3 cut(s) 105, 147, 207
BlsI GCNGC 3 cut(s) 106, 148, 208
Bme1390I CCNGG 1 cut(s) 161
BmgBI CACGTC 2 cut(s) 436, 445
BmiI GGNNCC 2 cut(s) 269, 292
BmrFI CCNGG 1 cut(s) 161
Bpu10I CCTNAGC 1 cut(s) 404
BpuMI CCSGG 1 cut(s) 161
BsaJI CCNNGG 1 cut(s) 81
BsaXI ACNNNNNCTCC 2 cut(s) 107, 137
Bsc4I CCNNNNNNNGG 2 cut(s) 287, 585
Bse1I ACTGG 1 cut(s) 31
BseDI CCNNGG 1 cut(s) 81
BseLI CCNNNNNNNGG 2 cut(s) 287, 585
BseMII CTCAG 1 cut(s) 418
BseNI ACTGG 1 cut(s) 31
BseRI GAGGAG 1 cut(s) 345
BseXI GCAGC 2 cut(s) 133, 193
Bsh1236I CGCG 1 cut(s) 318
BsiSI CCGG 1 cut(s) 161
BslI CCNNNNNNNGG 2 cut(s) 287, 585
BsmI GAATGC 1 cut(s) 550
Bsp1407I TGTACA 1 cut(s) 363
Bsp143I GATC 5 cut(s) 13, 43, 140, 267, 472
Bsp19I CCATGG 1 cut(s) 81
BspACI CCGC 1 cut(s) 105
BspCNI CTCAG 1 cut(s) 417
BspFNI CGCG 1 cut(s) 318
BspHI TCATGA 2 cut(s) 475, 534
BspLI GGNNCC 2 cut(s) 269, 292
BspPI GGATC 2 cut(s) 262, 275
BsrGI TGTACA 1 cut(s) 363
BsrI ACTGG 1 cut(s) 31
BssECI CCNNGG 1 cut(s) 81
BssMI GATC 5 cut(s) 13, 43, 140, 267, 472
BssT1I CCWWGG 1 cut(s) 81
Bst4CI ACNGT 2 cut(s) 314, 501
BstAUI TGTACA 1 cut(s) 363
BstDEI CTNAG 3 cut(s) 137, 155, 404
BstDSI CCRYGG 1 cut(s) 81
BstENI CCTNNNNNAGG 1 cut(s) 583
BstFNI CGCG 1 cut(s) 318
BstHHI GCGC 1 cut(s) 320
BstKTI GATC 5 cut(s) 16, 46, 143, 270, 475
BstMBI GATC 5 cut(s) 13, 43, 140, 267, 472
BstSCI CCNGG 1 cut(s) 159
BstUI CGCG 1 cut(s) 318
BstV1I GCAGC 2 cut(s) 133, 193
BstX2I RGATCY 1 cut(s) 267
BstYI RGATCY 1 cut(s) 267
BtgI CCRYGG 1 cut(s) 81
BtrI CACGTC 2 cut(s) 436, 445
BtsIMutI CAGTG 1 cut(s) 188
CciI TCATGA 2 cut(s) 475, 534
CfoI GCGC 1 cut(s) 320
Csp6I GTAC 5 cut(s) 34, 304, 364, 497, 502
CviAII CATG 6 cut(s) 82, 325, 331, 370, 476, 535
CviJI RGCY 7 cut(s) 146, 159, 349, 408, 490, 578, 589
CviKI_1 RGCY 7 cut(s) 146, 159, 349, 408, 490, 578, 589
CviQI GTAC 5 cut(s) 34, 304, 364, 497, 502
DdeI CTNAG 3 cut(s) 137, 155, 404
DpnI GATC 5 cut(s) 15, 45, 142, 269, 474
DpnII GATC 5 cut(s) 13, 43, 140, 267, 472
Eco130I CCWWGG 1 cut(s) 81
Eco57I CTGAAG 1 cut(s) 9
EcoNI CCTNNNNNAGG 1 cut(s) 583
EcoT14I CCWWGG 1 cut(s) 81
ErhI CCWWGG 1 cut(s) 81
FaeI CATG 6 cut(s) 85, 328, 334, 373, 479, 538
FatI CATG 6 cut(s) 81, 324, 330, 369, 475, 534
FbaI TGATCA 1 cut(s) 43
Fnu4HI GCNGC 3 cut(s) 105, 147, 207
Fsp4HI GCNGC 3 cut(s) 105, 147, 207
FspBI CTAG 1 cut(s) 572
GlaI GCGC 1 cut(s) 319
GluI GCNGC 3 cut(s) 105, 147, 207
HapII CCGG 1 cut(s) 161
HhaI GCGC 1 cut(s) 320
Hin1II CATG 6 cut(s) 85, 328, 334, 373, 479, 538
Hin6I GCGC 1 cut(s) 318
HinP1I GCGC 1 cut(s) 318
HindIII AAGCTT 1 cut(s) 488
HinfI GANTC 1 cut(s) 422
HpaII CCGG 1 cut(s) 161
Hpy188I TCNGA 3 cut(s) 74, 115, 433
Hpy188III TCNNGA 3 cut(s) 476, 535, 572
Hpy99I CGWCG 2 cut(s) 74, 437
HpyAV CCTTC 2 cut(s) 118, 589
HpyCH4III ACNGT 2 cut(s) 314, 501
HpyCH4IV ACGT 4 cut(s) 36, 69, 435, 444
HpyF3I CTNAG 3 cut(s) 137, 155, 404
HpySE526I ACGT 4 cut(s) 36, 69, 435, 444
Hsp92II CATG 6 cut(s) 85, 328, 334, 373, 479, 538
HspAI GCGC 1 cut(s) 318
Ksp22I TGATCA 1 cut(s) 43
Kzo9I GATC 5 cut(s) 13, 43, 140, 267, 472
LpnPI CCDG 5 cut(s) 36, 44, 158, 174, 571
Lsp1109I GCAGC 2 cut(s) 133, 193
MaeI CTAG 1 cut(s) 572
MaeII ACGT 4 cut(s) 36, 69, 435, 444
MaeIII GTNAC 1 cut(s) 229
MalI GATC 5 cut(s) 15, 45, 142, 269, 474
MboI GATC 5 cut(s) 13, 43, 140, 267, 472
MboII GAAGA 2 cut(s) 8, 482
MflI RGATCY 1 cut(s) 267
MluCI AATT 2 cut(s) 59, 426
MmeI TCCRAC 2 cut(s) 52, 456
MnlI CCTC 9 cut(s) 110, 196, 366, 405, 407, 413, 476, 502, 579
MseI TTAA 5 cut(s) 129, 197, 240, 273, 595
MslI CAYNNNNRTG 3 cut(s) 299, 329, 539
MspA1I CMGCKG 1 cut(s) 146
MspI CCGG 1 cut(s) 161
MspR9I CCNGG 1 cut(s) 161
Mva1269I GAATGC 1 cut(s) 550
MvnI CGCG 1 cut(s) 318
NciI CCSGG 1 cut(s) 161
NcoI CCATGG 1 cut(s) 81
NdeII GATC 5 cut(s) 13, 43, 140, 267, 472
NlaIII CATG 6 cut(s) 85, 328, 334, 373, 479, 538
NlaIV GGNNCC 2 cut(s) 269, 292
PagI TCATGA 2 cut(s) 475, 534
PcsI WCGNNNNNNNCGW 1 cut(s) 441
PctI GAATGC 1 cut(s) 550
PfeI GAWTC 1 cut(s) 422
PkrI GCNGC 3 cut(s) 106, 148, 208
PspN4I GGNNCC 2 cut(s) 269, 292
PsuI RGATCY 1 cut(s) 267
PvuII CAGCTG 1 cut(s) 146
RsaI GTAC 5 cut(s) 35, 305, 365, 498, 503
RsaNI GTAC 5 cut(s) 34, 304, 364, 497, 502
RseI CAYNNNNRTG 3 cut(s) 299, 329, 539
SaqAI TTAA 5 cut(s) 129, 197, 240, 273, 595
SatI GCNGC 3 cut(s) 105, 147, 207
Sau3AI GATC 5 cut(s) 13, 43, 140, 267, 472
ScrFI CCNGG 1 cut(s) 161
SetI ASST 9 cut(s) 39, 72, 148, 250, 410, 438, 447, 468, 492
SmiMI CAYNNNNRTG 3 cut(s) 299, 329, 539
Sse9I AATT 2 cut(s) 59, 426
SsiI CCGC 1 cut(s) 105
SspMI CTAG 1 cut(s) 572
StyD4I CCNGG 1 cut(s) 159
StyI CCWWGG 1 cut(s) 81
TaaI ACNGT 2 cut(s) 314, 501
TaiI ACGT 4 cut(s) 39, 72, 438, 447
TaqI TCGA 1 cut(s) 468
TasI AATT 2 cut(s) 59, 426
TatI WGTACW 2 cut(s) 363, 501
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 1 cut(s) 422
Tru1I TTAA 5 cut(s) 129, 197, 240, 273, 595
Tru9I TTAA 5 cut(s) 129, 197, 240, 273, 595
TscAI CASTG 1 cut(s) 195
TseI GCWGC 2 cut(s) 146, 206
TspDTI ATGAA 4 cut(s) 258, 341, 571, 581
TspGWI ACGGA 1 cut(s) 29
TspRI CASTG 1 cut(s) 195
XagI CCTNNNNNAGG 1 cut(s) 583
XbaI TCTAGA 1 cut(s) 571
XcmI CCANNNNNNNNNTGG 1 cut(s) 88
XspI CTAG 1 cut(s) 572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.