Rh2BG543700
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
75205713 .. 75206009
297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG543700.1

Sequence Viewer

Length: 297 bp
ATGTTTGATTACAATTTTCCGGCCATTAACATGCAACACTACAATCAGCTTACTCCTCCGGTGTACAACATGGCAAGCATTTCGAAAGACGTTCCTCTTTTCTTTGGCTATGGAGGGAGAGATGCACTTTCGGACGTCAATGATGTGAAGGCTTTACTTAATGACCTTAGTGATCATGACAAGGACAAGCTTGTGGAGCAATACGTGGAGGAGTATGCTCATATGGATTTCATTATGGGTGGGAATGCCAATAAAAAAGTCTACGATCCTCTGCTCACTTTCTTCGGGCAACATTGA

Protein Analysis

98

Amino Acids

11.26

Weight (kDa)

4.69

Isoelectric Point (pI)

29.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000706)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 138
AccI GTMKAC 1 cut(s) 261
AclWI GGATC 1 cut(s) 260
AcoI YGGCCR 1 cut(s) 21
AcyI GRCGYC 1 cut(s) 135
AfaI GTAC 1 cut(s) 65
AluBI AGCT 2 cut(s) 49, 190
AluI AGCT 2 cut(s) 49, 190
AlwI GGATC 1 cut(s) 260
AoxI GGCC 1 cut(s) 21
AsuII TTCGAA 1 cut(s) 83
BcgI CGANNNNNNTGC 2 cut(s) 63, 97
BclI TGATCA 1 cut(s) 172
BmsI GCATC 1 cut(s) 112
Bpu14I TTCGAA 1 cut(s) 83
BsaAI YACGTR 1 cut(s) 205
BsaHI GRCGYC 1 cut(s) 135
BsaWI WCCGGW 1 cut(s) 58
BseRI GAGGAG 2 cut(s) 45, 224
BshFI GGCC 1 cut(s) 23
BsiSI CCGG 2 cut(s) 20, 59
BsmI GAATGC 1 cut(s) 250
BsnI GGCC 1 cut(s) 23
Bsp119I TTCGAA 1 cut(s) 83
Bsp1407I TGTACA 1 cut(s) 63
Bsp143I GATC 2 cut(s) 172, 265
BspANI GGCC 1 cut(s) 23
BspHI TCATGA 1 cut(s) 175
BspPI GGATC 1 cut(s) 260
BspT104I TTCGAA 1 cut(s) 83
BsrGI TGTACA 1 cut(s) 63
BssMI GATC 2 cut(s) 172, 265
BssNI GRCGYC 1 cut(s) 135
BstACI GRCGYC 1 cut(s) 135
BstAUI TGTACA 1 cut(s) 63
BstBAI YACGTR 1 cut(s) 205
BstBI TTCGAA 1 cut(s) 83
BstC8I GCNNGC 1 cut(s) 76
BstDEI CTNAG 1 cut(s) 167
BstKTI GATC 2 cut(s) 175, 268
BstMBI GATC 2 cut(s) 172, 265
BstMWI GCNNNNNNNGC 1 cut(s) 196
BstNSI RCATGY 1 cut(s) 34
BsuRI GGCC 1 cut(s) 23
Cac8I GCNNGC 1 cut(s) 76
CciI TCATGA 1 cut(s) 175
Csp6I GTAC 1 cut(s) 64
CviAII CATG 3 cut(s) 31, 70, 176
CviJI RGCY 5 cut(s) 23, 49, 108, 152, 190
CviKI_1 RGCY 5 cut(s) 23, 49, 108, 152, 190
CviQI GTAC 1 cut(s) 64
DdeI CTNAG 1 cut(s) 167
DpnI GATC 2 cut(s) 174, 267
DpnII GATC 2 cut(s) 172, 265
EaeI YGGCCR 1 cut(s) 21
FaeI CATG 3 cut(s) 34, 73, 179
FaiI YATR 8 cut(s) 32, 71, 111, 177, 216, 222, 224, 236
FatI CATG 3 cut(s) 30, 69, 175
FauNDI CATATG 1 cut(s) 222
FbaI TGATCA 1 cut(s) 172
FblI GTMKAC 1 cut(s) 261
HaeIII GGCC 1 cut(s) 23
HapII CCGG 2 cut(s) 20, 59
Hin1I GRCGYC 1 cut(s) 135
Hin1II CATG 3 cut(s) 34, 73, 179
HindIII AAGCTT 1 cut(s) 188
HpaII CCGG 2 cut(s) 20, 59
Hpy166II GTNNAC 2 cut(s) 64, 262
Hpy188I TCNGA 1 cut(s) 133
Hpy188III TCNNGA 1 cut(s) 176
Hpy8I GTNNAC 2 cut(s) 64, 262
HpyAV CCTTC 1 cut(s) 142
HpyCH4IV ACGT 3 cut(s) 90, 135, 204
HpyCH4V TGCA 2 cut(s) 34, 125
HpyF10VI GCNNNNNNNGC 1 cut(s) 196
HpyF3I CTNAG 1 cut(s) 167
HpySE526I ACGT 3 cut(s) 90, 135, 204
Hsp92I GRCGYC 1 cut(s) 135
Hsp92II CATG 3 cut(s) 34, 73, 179
Ksp22I TGATCA 1 cut(s) 172
Kzo9I GATC 2 cut(s) 172, 265
LmnI GCTCC 1 cut(s) 196
LpnPI CCDG 2 cut(s) 33, 72
LweI GCATC 1 cut(s) 112
MaeII ACGT 3 cut(s) 90, 135, 204
MalI GATC 2 cut(s) 174, 267
MboI GATC 2 cut(s) 172, 265
MboII GAAGA 1 cut(s) 274
MluCI AATT 1 cut(s) 13
MnlI CCTC 5 cut(s) 66, 105, 107, 202, 279
MseI TTAA 2 cut(s) 27, 159
MslI CAYNNNNRTG 1 cut(s) 29
MspI CCGG 2 cut(s) 20, 59
Mva1269I GAATGC 1 cut(s) 250
MwoI GCNNNNNNNGC 1 cut(s) 196
NdeI CATATG 1 cut(s) 222
NdeII GATC 2 cut(s) 172, 265
NlaIII CATG 3 cut(s) 34, 73, 179
NspI RCATGY 1 cut(s) 34
NspV TTCGAA 1 cut(s) 83
PagI TCATGA 1 cut(s) 175
PctI GAATGC 1 cut(s) 250
Ppu21I YACGTR 1 cut(s) 205
RsaI GTAC 1 cut(s) 65
RsaNI GTAC 1 cut(s) 64
RseI CAYNNNNRTG 1 cut(s) 29
SaqAI TTAA 2 cut(s) 27, 159
Sau3AI GATC 2 cut(s) 172, 265
SetI ASST 6 cut(s) 51, 93, 138, 168, 192, 207
SfaNI GCATC 1 cut(s) 112
SfuI TTCGAA 1 cut(s) 83
SmiMI CAYNNNNRTG 1 cut(s) 29
Sse9I AATT 1 cut(s) 13
TaiI ACGT 3 cut(s) 93, 138, 207
TaqI TCGA 1 cut(s) 83
TasI AATT 1 cut(s) 13
TatI WGTACW 1 cut(s) 63
Tru1I TTAA 2 cut(s) 27, 159
Tru9I TTAA 2 cut(s) 27, 159
TspDTI ATGAA 1 cut(s) 220
XceI RCATGY 1 cut(s) 34
XmiI GTMKAC 1 cut(s) 261
ZraI GACGTC 1 cut(s) 136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.