Rorug05G0548800
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
73760567 .. 73761901
1335 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0548800.1

Sequence Viewer

Length: 1335 bp
ATGAAACAACAGCTGAAGTTTAATCGCTGTCACCAAGAAGTAGCCGATGCCATAATGGCGTTCATCAAGGAACAGAATCCCTCTCCCTCTGAAACCCCGGAAGCTAGAGGCGAACTAGTTGAATTTTCGATTATGGAGAATGCTGATGAGGGTGGTTTGATCACAAGGAGACAAGGGAATAATGATGTGCCAGAAAGGAGGGACGTCTCGCAATTCTTGAAGGCATTGGAAGAGGTCAAAGAACTTTTTCGTAACTCCCATGAGTCTGGTAAGGATGTCTCAAAGAAGTTGGAGACAGACAGTATTGGAATCAAAGCTGAATCATCACTACCTTCGAAACTGGTCAGGTCACTGTCAAGAAGCAGCTCTAGAGTTGGTTGTTCAACCTTTTATGGTTCTGAAATAATGGGTGAAACCCTAGGAGCACTGAGGCGTTGGGAGGAGAAACTCTATCATGAACTGAAGACGATCAAAAAGGCCGAACCCAAGAGGCAGAAACCCGAAGATTCCAGCAGCGAAAACCATCCTAATTCAGAAACCGAGATGAAAATAATGTCGAATGTGAAATGTAAAGTTGCCAAAAGGGCCGCTGATAATGACTCCGAAGAGATTACAAGATTGAGAAAGGAATGTTTGCTTCCCAAACTTGGTGAGCAGCTAGATGGGTTGGCGGGAAACTGGAAAGCAATGTCAGAGTTTCATGAAAGCCAAAAGAAGATTATGTCTCAAGTAAGAGAATCTCCCAACCATCCATTACTCTGCGAAGATGAGCACCAAAAAGCTACCAAAAAGCTCAAAGCACAGCTTTGCAATTGGCTCGACTGCTTTAAGTCCTACGTTTCTCTACAAAAGAAATACATGGAATCTCTTTGTTGGTGGCTCTTTCATAACGACAAACCAATAATACTCGGAGACAATGATGGTGATTGGTTGATTAACCTGAAAAATCTGGAAAGTAATACAAAGGAGGTGACTACTGAGATGAAAAGGTTCCAGAAAGATGTTGCAGCCCTATTAGGCCAACAAGGGAAGGAGCATGACCAAAAGAGGGAGGTCAAGCGACTTGAGAGCCGACTCGAGATTAAGAAGCGGATGATTAATCCTGTGAACGAGAAGCAAACCTTGGAGGAGATTGAGAAGTTAAAGGAGAGGATCGAGAGAACTAAAGAGACGCATCGAAGTAAAATGCAGGAGACGCAGCAAATGGTGAATCAATTTCAGACAGGGTTCTCTGATGTTTTCAAAAAGCTAGCGGATTTTTCAAGAAAAGCTAACGAAATCTATACCGAGCTTATCAAACACCTGCCAAAAACCCATCTGGACACGCAAACATAA

Protein Analysis

444

Amino Acids

51.5

Weight (kDa)

8.55

Isoelectric Point (pI)

56.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF632 PF04782 73 - 296 6.4e-30 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000706)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1311
AatII GACGTC 1 cut(s) 207
Acc36I ACCTGC 1 cut(s) 1311
AciI CCGC 4 cut(s) 588, 671, 1090, 1253
AclWI GGATC 1 cut(s) 1160
AcsI RAATTY 1 cut(s) 122
AcuI CTGAAG 2 cut(s) 35, 482
AcyI GRCGYC 1 cut(s) 204
AfiI CCNNNNNNNGG 2 cut(s) 647, 1048
AgsI TTSAA 5 cut(s) 122, 220, 384, 1243, 1263
AhlI ACTAGT 1 cut(s) 115
AjuI GAANNNNNNNTTGG 2 cut(s) 1106, 1138
Alw21I GWGCWC 2 cut(s) 427, 774
Alw26I GTCTC 8 cut(s) 163, 211, 283, 287, 729, 906, 1163, 1187
AlwI GGATC 1 cut(s) 1160
Ama87I CYCGRG 1 cut(s) 1076
AoxI GGCC 3 cut(s) 477, 585, 1018
ApeKI GCWGC 5 cut(s) 363, 513, 655, 1007, 1198
ApoI RAATTY 1 cut(s) 122
AseI ATTAAT 1 cut(s) 1098
Asp700I GAANNNNTTC 2 cut(s) 246, 989
AspA2I CCTAGG 1 cut(s) 418
AspS9I GGNCC 1 cut(s) 585
AsuC2I CCSGG 1 cut(s) 98
AsuHPI GGTGA 6 cut(s) 23, 422, 662, 935, 982, 1219
AsuII TTCGAA 1 cut(s) 335
AsuNHI GCTAGC 1 cut(s) 1249
AvaI CYCGRG 1 cut(s) 1076
AvrII CCTAGG 1 cut(s) 418
BbsI GAAGAC 1 cut(s) 470
Bbv12I GWGCWC 2 cut(s) 427, 774
BbvI GCAGC 5 cut(s) 375, 525, 667, 1019, 1210
BccI CCATC 5 cut(s) 531, 656, 756, 914, 1323
BcgI CGANNNNNNTGC 2 cut(s) 799, 833
BclI TGATCA 1 cut(s) 159
BcnI CCSGG 1 cut(s) 98
BcoDI GTCTC 8 cut(s) 163, 211, 283, 287, 729, 906, 1163, 1187
BcuI ACTAGT 1 cut(s) 115
BfaI CTAG 6 cut(s) 105, 116, 369, 419, 659, 1250
BfuAI ACCTGC 1 cut(s) 1311
BglI GCCNNNNNGGC 2 cut(s) 56, 584
BisI GCNGC 6 cut(s) 364, 514, 588, 656, 1008, 1199
BlnI CCTAGG 1 cut(s) 418
BlsI GCNGC 6 cut(s) 365, 515, 589, 657, 1009, 1200
Bme1390I CCNGG 1 cut(s) 98
BmeT110I CYCGRG 1 cut(s) 1076
BmgT120I GGNCC 1 cut(s) 585
BmiI GGNNCC 1 cut(s) 992
BmrFI CCNGG 1 cut(s) 98
BmsI GCATC 2 cut(s) 37, 1183
BmtI GCTAGC 1 cut(s) 1253
BpiI GAAGAC 1 cut(s) 470
Bpu14I TTCGAA 1 cut(s) 335
BpuEI CTTGAG 2 cut(s) 711, 1085
BpuMI CCSGG 1 cut(s) 98
BsaHI GRCGYC 1 cut(s) 204
BsaJI CCNNGG 3 cut(s) 96, 418, 1122
Bsc4I CCNNNNNNNGG 2 cut(s) 647, 1048
Bse1I ACTGG 2 cut(s) 345, 683
Bse3DI GCAATG 1 cut(s) 693
BseDI CCNNGG 3 cut(s) 96, 418, 1122
BseGI GGATG 4 cut(s) 280, 523, 748, 1098
BseLI CCNNNNNNNGG 2 cut(s) 647, 1048
BseMI GCAATG 1 cut(s) 693
BseMII CTCAG 2 cut(s) 419, 969
BseNI ACTGG 2 cut(s) 345, 683
BseRI GAGGAG 2 cut(s) 455, 1142
BseXI GCAGC 5 cut(s) 375, 525, 667, 1019, 1210
BshFI GGCC 3 cut(s) 479, 587, 1020
BsiHKAI GWGCWC 2 cut(s) 427, 774
BsiHKCI CYCGRG 1 cut(s) 1076
BsiSI CCGG 1 cut(s) 98
BslFI GGGAC 1 cut(s) 215
BslI CCNNNNNNNGG 2 cut(s) 647, 1048
BsmAI GTCTC 8 cut(s) 163, 211, 283, 287, 729, 906, 1163, 1187
BsmBI CGTCTC 3 cut(s) 211, 1163, 1187
BsmFI GGGAC 1 cut(s) 215
BsmI GAATGC 1 cut(s) 145
BsnI GGCC 3 cut(s) 479, 587, 1020
BsoBI CYCGRG 1 cut(s) 1076
Bsp119I TTCGAA 1 cut(s) 335
Bsp1286I GDGCHC 2 cut(s) 427, 774
Bsp143I GATC 3 cut(s) 159, 468, 1152
BspACI CCGC 4 cut(s) 588, 671, 1090, 1253
BspANI GGCC 3 cut(s) 479, 587, 1020
BspCNI CTCAG 2 cut(s) 420, 970
BspHI TCATGA 2 cut(s) 454, 700
BspLI GGNNCC 1 cut(s) 992
BspMI ACCTGC 1 cut(s) 1311
BspOI GCTAGC 1 cut(s) 1253
BspPI GGATC 1 cut(s) 1160
BspT104I TTCGAA 1 cut(s) 335
BsrDI GCAATG 1 cut(s) 693
BsrI ACTGG 2 cut(s) 345, 683
BssECI CCNNGG 3 cut(s) 96, 418, 1122
BssMI GATC 3 cut(s) 159, 468, 1152
BssNI GRCGYC 1 cut(s) 204
BssT1I CCWWGG 2 cut(s) 418, 1122
Bst4CI ACNGT 2 cut(s) 302, 354
Bst6I CTCTTC 2 cut(s) 225, 600
BstACI GRCGYC 1 cut(s) 204
BstBI TTCGAA 1 cut(s) 335
BstC8I GCNNGC 1 cut(s) 1251
BstDEI CTNAG 2 cut(s) 428, 978
BstF5I GGATG 4 cut(s) 280, 523, 748, 1098
BstKTI GATC 3 cut(s) 162, 471, 1155
BstMAI GTCTC 8 cut(s) 163, 211, 283, 287, 729, 906, 1163, 1187
BstMBI GATC 3 cut(s) 159, 468, 1152
BstMWI GCNNNNNNNGC 3 cut(s) 56, 584, 1195
BstSCI CCNGG 1 cut(s) 96
BstV1I GCAGC 5 cut(s) 375, 525, 667, 1019, 1210
BstV2I GAAGAC 1 cut(s) 470
BstXI CCANNNNNNTGG 1 cut(s) 266
BsuRI GGCC 3 cut(s) 479, 587, 1020
BtsCI GGATG 4 cut(s) 280, 523, 748, 1098
BtsIMutI CAGTG 2 cut(s) 350, 425
BveI ACCTGC 1 cut(s) 1311
Cac8I GCNNGC 1 cut(s) 1251
CciI TCATGA 2 cut(s) 454, 700
Cfr13I GGNCC 1 cut(s) 585
CseI GACGC 2 cut(s) 1180, 1204
CviAII CATG 5 cut(s) 260, 455, 701, 859, 1037
DdeI CTNAG 2 cut(s) 428, 978
DpnI GATC 3 cut(s) 161, 470, 1154
DpnII GATC 3 cut(s) 159, 468, 1152
Eam1104I CTCTTC 2 cut(s) 225, 600
EarI CTCTTC 2 cut(s) 225, 600
Eco130I CCWWGG 2 cut(s) 418, 1122
Eco57I CTGAAG 2 cut(s) 35, 482
Eco88I CYCGRG 1 cut(s) 1076
EcoT14I CCWWGG 2 cut(s) 418, 1122
ErhI CCWWGG 2 cut(s) 418, 1122
Esp3I CGTCTC 3 cut(s) 211, 1163, 1187
FaeI CATG 5 cut(s) 263, 458, 704, 862, 1040
FalI AAGNNNNNCTT 4 cut(s) 789, 821, 1106, 1138
FaqI GGGAC 1 cut(s) 215
FatI CATG 5 cut(s) 259, 454, 700, 858, 1036
FauI CCCGC 1 cut(s) 664
FbaI TGATCA 1 cut(s) 159
Fnu4HI GCNGC 6 cut(s) 364, 514, 588, 656, 1008, 1199
FokI GGATG 4 cut(s) 287, 510, 735, 1105
Fsp4HI GCNGC 6 cut(s) 364, 514, 588, 656, 1008, 1199
FspBI CTAG 6 cut(s) 105, 116, 369, 419, 659, 1250
GluI GCNGC 6 cut(s) 364, 514, 588, 656, 1008, 1199
HaeIII GGCC 3 cut(s) 479, 587, 1020
HapII CCGG 1 cut(s) 98
HgaI GACGC 2 cut(s) 1180, 1204
Hin1I GRCGYC 1 cut(s) 204
Hin1II CATG 5 cut(s) 263, 458, 704, 862, 1040
HpaII CCGG 1 cut(s) 98
HphI GGTGA 6 cut(s) 23, 422, 662, 935, 982, 1219
Hpy166II GTNNAC 1 cut(s) 1108
Hpy188I TCNGA 8 cut(s) 91, 400, 535, 604, 694, 911, 1221, 1234
Hpy8I GTNNAC 1 cut(s) 1108
HpyAV CCTTC 3 cut(s) 214, 342, 1024
HpyCH4III ACNGT 2 cut(s) 302, 354
HpyCH4IV ACGT 2 cut(s) 204, 837
HpyCH4V TGCA 3 cut(s) 810, 1007, 1189
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 584, 1195
HpyF3I CTNAG 2 cut(s) 428, 978
HpySE526I ACGT 2 cut(s) 204, 837
Hsp92I GRCGYC 1 cut(s) 204
Hsp92II CATG 5 cut(s) 263, 458, 704, 862, 1040
Ksp22I TGATCA 1 cut(s) 159
Kzo9I GATC 3 cut(s) 159, 468, 1152
LmnI GCTCC 2 cut(s) 422, 1033
Lsp1109I GCAGC 5 cut(s) 375, 525, 667, 1019, 1210
LweI GCATC 2 cut(s) 37, 1183
MaeI CTAG 6 cut(s) 105, 116, 369, 419, 659, 1250
MaeII ACGT 2 cut(s) 204, 837
MaeIII GTNAC 4 cut(s) 29, 251, 348, 970
MalI GATC 3 cut(s) 161, 470, 1154
MboI GATC 3 cut(s) 159, 468, 1152
MboII GAAGA 6 cut(s) 242, 475, 515, 617, 727, 776
MfeI CAATTG 1 cut(s) 811
MhlI GDGCHC 2 cut(s) 427, 774
MluCI AATT 5 cut(s) 122, 212, 529, 811, 1214
MlyI GAGTC 3 cut(s) 272, 593, 1068
MmeI TCCRAC 1 cut(s) 270
MroXI GAANNNNTTC 2 cut(s) 246, 989
MseI TTAA 6 cut(s) 21, 828, 936, 1083, 1098, 1142
MspA1I CMGCKG 2 cut(s) 13, 590
MspI CCGG 1 cut(s) 98
MspR9I CCNGG 1 cut(s) 98
MunI CAATTG 1 cut(s) 811
Mva1269I GAATGC 1 cut(s) 145
MwoI GCNNNNNNNGC 3 cut(s) 56, 584, 1195
NciI CCSGG 1 cut(s) 98
NdeII GATC 3 cut(s) 159, 468, 1152
NheI GCTAGC 1 cut(s) 1249
NlaIII CATG 5 cut(s) 263, 458, 704, 862, 1040
NlaIV GGNNCC 1 cut(s) 992
NmuCI GTSAC 3 cut(s) 29, 348, 970
NspV TTCGAA 1 cut(s) 335
PaeR7I CTCGAG 1 cut(s) 1076
PagI TCATGA 2 cut(s) 454, 700
PaqCI CACCTGC 1 cut(s) 1311
PctI GAATGC 1 cut(s) 145
PdmI GAANNNNTTC 2 cut(s) 246, 989
PfeI GAWTC 7 cut(s) 76, 309, 320, 506, 737, 863, 1210
PkrI GCNGC 6 cut(s) 365, 515, 589, 657, 1009, 1200
PleI GAGTC 3 cut(s) 271, 593, 1068
PpsI GAGTC 3 cut(s) 271, 593, 1068
PshBI ATTAAT 1 cut(s) 1098
PspN4I GGNNCC 1 cut(s) 992
PspPI GGNCC 1 cut(s) 585
PvuII CAGCTG 1 cut(s) 13
SaqAI TTAA 6 cut(s) 21, 828, 936, 1083, 1098, 1142
SatI GCNGC 6 cut(s) 364, 514, 588, 656, 1008, 1199
Sau3AI GATC 3 cut(s) 159, 468, 1152
Sau96I GGNCC 1 cut(s) 585
SchI GAGTC 3 cut(s) 272, 593, 1068
ScrFI CCNGG 1 cut(s) 98
SduI GDGCHC 2 cut(s) 427, 774
SfaNI GCATC 2 cut(s) 37, 1183
Sfr274I CTCGAG 1 cut(s) 1076
SfuI TTCGAA 1 cut(s) 335
SlaI CTCGAG 1 cut(s) 1076
SmlI CTYRAG 3 cut(s) 726, 1064, 1076
SmoI CTYRAG 3 cut(s) 726, 1064, 1076
SpeI ACTAGT 1 cut(s) 115
Sse9I AATT 5 cut(s) 122, 212, 529, 811, 1214
SsiI CCGC 4 cut(s) 588, 671, 1090, 1253
SspMI CTAG 6 cut(s) 105, 116, 369, 419, 659, 1250
StyD4I CCNGG 1 cut(s) 96
StyI CCWWGG 2 cut(s) 418, 1122
TaaI ACNGT 2 cut(s) 302, 354
TaiI ACGT 2 cut(s) 207, 840
TaqI TCGA 7 cut(s) 128, 335, 557, 819, 1077, 1155, 1177
TasI AATT 5 cut(s) 122, 212, 529, 811, 1214
TauI GCSGC 1 cut(s) 590
TfiI GAWTC 7 cut(s) 76, 309, 320, 506, 737, 863, 1210
Tru1I TTAA 6 cut(s) 21, 828, 936, 1083, 1098, 1142
Tru9I TTAA 6 cut(s) 21, 828, 936, 1083, 1098, 1142
TscAI CASTG 2 cut(s) 357, 432
TseFI GTSAC 3 cut(s) 29, 348, 970
TseI GCWGC 5 cut(s) 363, 513, 655, 1007, 1198
Tsp45I GTSAC 3 cut(s) 29, 348, 970
TspDTI ATGAA 8 cut(s) 17, 52, 471, 560, 689, 717, 875, 998
TspRI CASTG 2 cut(s) 357, 432
VspI ATTAAT 1 cut(s) 1098
XapI RAATTY 1 cut(s) 122
XbaI TCTAGA 1 cut(s) 368
XhoI CTCGAG 1 cut(s) 1076
XmaJI CCTAGG 1 cut(s) 418
XmnI GAANNNNTTC 2 cut(s) 246, 989
XspI CTAG 6 cut(s) 105, 116, 369, 419, 659, 1250
ZraI GACGTC 1 cut(s) 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.