pycom09g04030
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
2980519 .. 2981134
616 bp
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UTR
Exon/CDS
Intron
pycom09g04030.2

Sequence Viewer

Length: 336 bp
ATGCATCTGTTTCAGATGGTCACAAAGGGAAACATAGCAATGTACGATTATGTTTTTCCAGCAATAAACATTCAGCACTACAATCAGACTACTCCTCCTGTGTACAACATGGAAAACATCCCAAAAGACGTTCCTCTATTCCTAAGCTATGGAGGGAGAGACCCGCTTTCGAACGTGCTTGATGTGAAGTATTTGCTGGACAACCTCAGAGATCATGACAAGGACAAGCTGGTGGCACAATATACAGCAGAGTACGCTCATATGGATTTTCTTATGGCTGAGAGTGCCAACCAAGTTGTCTATGCTCCCCTACTGGATTTCTTCAAGCTCCATTGA

Protein Analysis

112

Amino Acids

12.92

Weight (kDa)

5.31

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000706)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 164
AfaI GTAC 3 cut(s) 44, 104, 254
AgsI TTSAA 1 cut(s) 325
AluBI AGCT 3 cut(s) 147, 229, 328
AluI AGCT 3 cut(s) 147, 229, 328
Alw26I GTCTC 1 cut(s) 153
AsuII TTCGAA 1 cut(s) 170
BccI CCATC 1 cut(s) 10
BcoDI GTCTC 1 cut(s) 153
BmsI GCATC 1 cut(s) 13
Bpu10I CCTNAGC 1 cut(s) 143
Bpu14I TTCGAA 1 cut(s) 170
BsaI GGTCTC 1 cut(s) 153
BsaXI ACNNNNNCTCC 2 cut(s) 79, 109
Bse1I ACTGG 1 cut(s) 318
Bse3DI GCAATG 1 cut(s) 45
BseGI GGATG 1 cut(s) 117
BseMI GCAATG 1 cut(s) 45
BseMII CTCAG 2 cut(s) 220, 270
BseNI ACTGG 1 cut(s) 318
BseRI GAGGAG 1 cut(s) 84
BsmAI GTCTC 1 cut(s) 153
Bso31I GGTCTC 1 cut(s) 153
Bsp119I TTCGAA 1 cut(s) 170
Bsp1407I TGTACA 1 cut(s) 102
Bsp143I GATC 1 cut(s) 211
BspACI CCGC 1 cut(s) 164
BspCNI CTCAG 2 cut(s) 219, 271
BspHI TCATGA 1 cut(s) 214
BspT104I TTCGAA 1 cut(s) 170
BspTNI GGTCTC 1 cut(s) 153
BsrDI GCAATG 1 cut(s) 45
BsrGI TGTACA 1 cut(s) 102
BsrI ACTGG 1 cut(s) 318
BssMI GATC 1 cut(s) 211
BstAUI TGTACA 1 cut(s) 102
BstBI TTCGAA 1 cut(s) 170
BstDEI CTNAG 3 cut(s) 143, 206, 279
BstF5I GGATG 1 cut(s) 117
BstKTI GATC 1 cut(s) 214
BstMAI GTCTC 1 cut(s) 153
BstMBI GATC 1 cut(s) 211
BstMWI GCNNNNNNNGC 2 cut(s) 254, 284
BtsCI GGATG 1 cut(s) 117
CciI TCATGA 1 cut(s) 214
Csp6I GTAC 3 cut(s) 43, 103, 253
CviAII CATG 2 cut(s) 109, 215
CviJI RGCY 4 cut(s) 147, 229, 278, 328
CviKI_1 RGCY 4 cut(s) 147, 229, 278, 328
CviQI GTAC 3 cut(s) 43, 103, 253
DdeI CTNAG 3 cut(s) 143, 206, 279
DpnI GATC 1 cut(s) 213
DpnII GATC 1 cut(s) 211
Eco31I GGTCTC 1 cut(s) 153
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 2 cut(s) 112, 218
FatI CATG 2 cut(s) 108, 214
FauI CCCGC 1 cut(s) 171
FauNDI CATATG 1 cut(s) 261
FokI GGATG 1 cut(s) 104
Hin1II CATG 2 cut(s) 112, 218
Hpy166II GTNNAC 1 cut(s) 103
Hpy188I TCNGA 3 cut(s) 15, 87, 209
Hpy188III TCNNGA 1 cut(s) 215
Hpy8I GTNNAC 1 cut(s) 103
HpyCH4IV ACGT 2 cut(s) 129, 174
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 2 cut(s) 254, 284
HpyF3I CTNAG 3 cut(s) 143, 206, 279
HpySE526I ACGT 2 cut(s) 129, 174
Hsp92II CATG 2 cut(s) 112, 218
Kzo9I GATC 1 cut(s) 211
LmnI GCTCC 2 cut(s) 310, 333
LpnPI CCDG 5 cut(s) 72, 111, 182, 215, 299
LweI GCATC 1 cut(s) 13
MaeII ACGT 2 cut(s) 129, 174
MaeIII GTNAC 1 cut(s) 19
MalI GATC 1 cut(s) 213
MboI GATC 1 cut(s) 211
MboII GAAGA 1 cut(s) 313
MnlI CCTC 4 cut(s) 105, 144, 146, 215
Mph1103I ATGCAT 1 cut(s) 6
MslI CAYNNNNRTG 1 cut(s) 38
MwoI GCNNNNNNNGC 2 cut(s) 254, 284
NdeI CATATG 1 cut(s) 261
NdeII GATC 1 cut(s) 211
NlaIII CATG 2 cut(s) 112, 218
NmuCI GTSAC 1 cut(s) 19
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 170
PagI TCATGA 1 cut(s) 214
RsaI GTAC 3 cut(s) 44, 104, 254
RsaNI GTAC 3 cut(s) 43, 103, 253
RseI CAYNNNNRTG 1 cut(s) 38
Sau3AI GATC 1 cut(s) 211
SetI ASST 6 cut(s) 132, 149, 177, 207, 231, 330
SfaNI GCATC 1 cut(s) 13
SfuI TTCGAA 1 cut(s) 170
SmiMI CAYNNNNRTG 1 cut(s) 38
SsiI CCGC 1 cut(s) 164
TaiI ACGT 2 cut(s) 132, 177
TaqI TCGA 1 cut(s) 170
TatI WGTACW 1 cut(s) 102
TseFI GTSAC 1 cut(s) 19
Tsp45I GTSAC 1 cut(s) 19
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.