Rw2G043780
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
70325606 .. 70327678
2073 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G043780.1

Sequence Viewer

Length: 1188 bp
ATGGCCGAGTACCCTTCAAACCCTCTGCTTCTTGTGGCTCTACTTTGTGCTTTTGCTGCTGCAGGAATCAACAGTCTTGATCAAAATGGTATTTGCAAATCATTGGTGGAGACACAAGGCTATACTTGCCAAGACCATCAAGTAACGACAGAAGATGGTTACATCCTTGGATTGCAGAGGATTCCATCTGGACGTTCCAGTAACAATTCGACCGCTCAGAAGCTGCCTGTTTTATTACAACATGGACTTACGATGGATGCTGCCGCATGGCTAATCAATCCTCCAGATCAAGCTTTGGCGTTTATCTTAGCCGACAAGGGGTTTGATGTATGGCTTGCTAATGCTCGAGGAACGCAGGCTAGCCGTGGACACCAATCACTTAGTACTAATGATCCGACTTATTGGGAATGGACATGGGATCAATTGGCTGCTTATGATCTTCCTGCTTTCTTTAATTATGTGAACAATCAAACAGGACAGAAAGTACACTATGTTGGCCATTCACTGGGAACATTGTCAGTATTAGCTGCCTTGTCACAACAAAAGCTGAGTAACACACTAAGATCAGCTGCTTTACTTAGCCCGGTTGCTTATCTGGGTCAGATCACCACAGTGTTGGGAAAAATTTCTGCTCAATCATATTCTGCTGATGGACTCTACGCCTCTGGTATCCGCGAATATCCTCCTCAAGGGGTAGCTGGACAGAACTTGGAGACATTTCTCTGCTCACAACCGGGTGTGGACTGCTCCAATTTTATGGCGGCTGTAACCGGTCCTAATTGCTGCATAACTCCAACAAGTTCAAATCTTATCTTTCAGCATATACCACAATCCACTTCCACAAAAAATATGGTACATTTGTCTGAAATGATCAGGAGAGGAACAATAACAATGTTTGATTACAATTTTCCGGCCATTAACATGCAACACTACAATCAGCTTACTCCTCCGGTGTACAACATGGCAAGCATTTCGAAAGACGTTCCTCTTTTCTTTGGCTATGGAGGGAGAGATGCACTTTCGGACGTCAATGATGTGAAGGCTTTGCTTAATGACCTTAGTGATCATGACAAGGACAAGCTTGTGGAACAATACGTGGAGGAGTATGCTCATATGGATTTCATTATGGGTGGGAATGCCAATAAAAAAGTCTACGATCCTCTGCTCACTTTCTTCGGGCAACATTGA

Protein Analysis

395

Amino Acids

43.24

Weight (kDa)

5.36

Isoelectric Point (pI)

32.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydro_lipase PF04083 34 - 93 5.9e-21 Partial alpha/beta-hydrolase lipase region
Abhydrolase_1 PF00561 76 - 195 1.8e-10 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000706)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1029
AccB7I CCANNNNNTGG 1 cut(s) 505
AccBSI CCGCTC 1 cut(s) 215
AccI GTMKAC 1 cut(s) 1152
AccII CGCG 1 cut(s) 675
AciI CCGC 4 cut(s) 213, 264, 673, 761
AclWI GGATC 3 cut(s) 386, 426, 1151
AcoI YGGCCR 3 cut(s) 3, 496, 912
AcsI RAATTY 1 cut(s) 624
AcyI GRCGYC 1 cut(s) 1026
AfaI GTAC 5 cut(s) 11, 385, 486, 855, 956
AfiI CCNNNNNNNGG 3 cut(s) 318, 505, 689
AgeI ACCGGT 1 cut(s) 770
AgsI TTSAA 2 cut(s) 18, 804
AleI CACNNNNGTG 1 cut(s) 611
AluBI AGCT 8 cut(s) 223, 293, 527, 547, 569, 698, 940, 1081
AluI AGCT 8 cut(s) 223, 293, 527, 547, 569, 698, 940, 1081
Alw26I GTCTC 2 cut(s) 104, 707
AlwI GGATC 3 cut(s) 386, 426, 1151
AlwNI CAGNNNCTG 1 cut(s) 223
Ama87I CYCGRG 1 cut(s) 345
AoxI GGCC 3 cut(s) 3, 496, 912
ApeKI GCWGC 8 cut(s) 56, 59, 223, 260, 428, 527, 569, 783
ApoI RAATTY 1 cut(s) 624
ArsI GACNNNNNNTTYG 2 cut(s) 305, 337
AsiGI ACCGGT 1 cut(s) 770
Asp700I GAANNNNTTC 1 cut(s) 625
AspS9I GGNCC 1 cut(s) 773
AsuC2I CCSGG 2 cut(s) 584, 735
AsuHPI GGTGA 1 cut(s) 598
AsuII TTCGAA 1 cut(s) 974
AsuNHI GCTAGC 1 cut(s) 359
AvaI CYCGRG 1 cut(s) 345
AvaII GGWCC 1 cut(s) 773
BaeI ACNNNNGTAYC 2 cut(s) 845, 878
BalI TGGCCA 1 cut(s) 498
BbvI GCAGC 8 cut(s) 43, 46, 210, 247, 415, 514, 556, 770
BccI CCATC 5 cut(s) 144, 149, 193, 247, 644
BceAI ACGGC 1 cut(s) 348
BcgI CGANNNNNNTGC 2 cut(s) 954, 988
BciVI GTATCC 1 cut(s) 680
BclI TGATCA 3 cut(s) 79, 870, 1063
BcnI CCSGG 2 cut(s) 584, 735
BcoDI GTCTC 2 cut(s) 104, 707
BfaI CTAG 1 cut(s) 360
BfmI CTRYAG 1 cut(s) 60
BfuI GTATCC 1 cut(s) 680
BmcAI AGTACT 1 cut(s) 385
Bme1390I CCNGG 2 cut(s) 584, 735
Bme18I GGWCC 1 cut(s) 773
BmeT110I CYCGRG 1 cut(s) 345
BmgT120I GGNCC 1 cut(s) 773
BmrFI CCNGG 2 cut(s) 584, 735
BmrI ACTGGG 1 cut(s) 515
BmsI GCATC 2 cut(s) 247, 1003
BmtI GCTAGC 1 cut(s) 363
BmuI ACTGGG 1 cut(s) 515
BpmI CTGGAG 1 cut(s) 267
Bpu14I TTCGAA 1 cut(s) 974
BpuEI CTTGAG 1 cut(s) 672
BpuMI CCSGG 2 cut(s) 584, 735
BsaAI YACGTR 1 cut(s) 1096
BsaHI GRCGYC 1 cut(s) 1026
BsaJI CCNNGG 2 cut(s) 166, 364
BsaWI WCCGGW 2 cut(s) 770, 949
Bsc4I CCNNNNNNNGG 3 cut(s) 318, 505, 689
Bse118I RCCGGY 1 cut(s) 770
Bse1I ACTGG 2 cut(s) 198, 510
BseDI CCNNGG 2 cut(s) 166, 364
BseGI GGATG 2 cut(s) 162, 262
BseLI CCNNNNNNNGG 3 cut(s) 318, 505, 689
BseMII CTCAG 2 cut(s) 230, 539
BseNI ACTGG 2 cut(s) 198, 510
BseRI GAGGAG 3 cut(s) 675, 936, 1115
BseXI GCAGC 8 cut(s) 43, 46, 210, 247, 415, 514, 556, 770
Bsh1236I CGCG 1 cut(s) 675
Bsh1285I CGRYCG 1 cut(s) 213
BshFI GGCC 3 cut(s) 5, 498, 914
BshTI ACCGGT 1 cut(s) 770
BsiEI CGRYCG 1 cut(s) 213
BsiHKCI CYCGRG 1 cut(s) 345
BsiSI CCGG 5 cut(s) 584, 734, 771, 911, 950
BslI CCNNNNNNNGG 3 cut(s) 318, 505, 689
BsmAI GTCTC 2 cut(s) 104, 707
BsmI GAATGC 1 cut(s) 1141
BsnI GGCC 3 cut(s) 5, 498, 914
BsoBI CYCGRG 1 cut(s) 345
Bsp119I TTCGAA 1 cut(s) 974
Bsp1407I TGTACA 1 cut(s) 954
BspACI CCGC 4 cut(s) 213, 264, 673, 761
BspANI GGCC 3 cut(s) 5, 498, 914
BspCNI CTCAG 2 cut(s) 229, 540
BspFNI CGCG 1 cut(s) 675
BspHI TCATGA 1 cut(s) 1066
BspMAI CTGCAG 1 cut(s) 64
BspOI GCTAGC 1 cut(s) 363
BspPI GGATC 3 cut(s) 386, 426, 1151
BspT104I TTCGAA 1 cut(s) 974
BsrBI CCGCTC 1 cut(s) 215
BsrFI RCCGGY 1 cut(s) 770
BsrGI TGTACA 1 cut(s) 954
BsrI ACTGG 2 cut(s) 198, 510
BssAI RCCGGY 1 cut(s) 770
BssECI CCNNGG 2 cut(s) 166, 364
BssNI GRCGYC 1 cut(s) 1026
BssT1I CCWWGG 1 cut(s) 166
Bst4CI ACNGT 2 cut(s) 74, 613
BstACI GRCGYC 1 cut(s) 1026
BstAUI TGTACA 1 cut(s) 954
BstBAI YACGTR 1 cut(s) 1096
BstBI TTCGAA 1 cut(s) 974
BstC8I GCNNGC 4 cut(s) 336, 357, 361, 967
BstDEI CTNAG 7 cut(s) 216, 307, 380, 548, 560, 578, 1058
BstDSI CCRYGG 1 cut(s) 364
BstENI CCTNNNNNAGG 1 cut(s) 687
BstF5I GGATG 2 cut(s) 162, 262
BstFNI CGCG 1 cut(s) 675
BstMAI GTCTC 2 cut(s) 104, 707
BstMCI CGRYCG 1 cut(s) 213
BstMWI GCNNNNNNNGC 2 cut(s) 56, 126
BstNSI RCATGY 1 cut(s) 925
BstSCI CCNGG 2 cut(s) 582, 733
BstSFI CTRYAG 1 cut(s) 60
BstUI CGCG 1 cut(s) 675
BstV1I GCAGC 8 cut(s) 43, 46, 210, 247, 415, 514, 556, 770
BstXI CCANNNNNNTGG 2 cut(s) 616, 757
BsuI GTATCC 1 cut(s) 680
BsuRI GGCC 3 cut(s) 5, 498, 914
BtgI CCRYGG 1 cut(s) 364
BtsCI GGATG 2 cut(s) 162, 262
BtsIMutI CAGTG 2 cut(s) 503, 618
Cac8I GCNNGC 4 cut(s) 336, 357, 361, 967
CaiI CAGNNNCTG 1 cut(s) 223
CciI TCATGA 1 cut(s) 1066
Cfr10I RCCGGY 1 cut(s) 770
Cfr13I GGNCC 1 cut(s) 773
Csp6I GTAC 5 cut(s) 10, 384, 485, 854, 955
CspAI ACCGGT 1 cut(s) 770
CviAII CATG 6 cut(s) 242, 267, 414, 922, 961, 1067
CviQI GTAC 5 cut(s) 10, 384, 485, 854, 955
DdeI CTNAG 7 cut(s) 216, 307, 380, 548, 560, 578, 1058
EaeI YGGCCR 3 cut(s) 3, 496, 912
Eco130I CCWWGG 1 cut(s) 166
Eco47I GGWCC 1 cut(s) 773
Eco88I CYCGRG 1 cut(s) 345
EcoNI CCTNNNNNAGG 1 cut(s) 687
EcoT14I CCWWGG 1 cut(s) 166
ErhI CCWWGG 1 cut(s) 166
FaeI CATG 6 cut(s) 245, 270, 417, 925, 964, 1070
FatI CATG 6 cut(s) 241, 266, 413, 921, 960, 1066
FauNDI CATATG 1 cut(s) 1113
FbaI TGATCA 3 cut(s) 79, 870, 1063
FblI GTMKAC 1 cut(s) 1152
FokI GGATG 2 cut(s) 149, 269
FspBI CTAG 1 cut(s) 360
GsuI CTGGAG 1 cut(s) 267
HaeIII GGCC 3 cut(s) 5, 498, 914
HapII CCGG 5 cut(s) 584, 734, 771, 911, 950
Hin1I GRCGYC 1 cut(s) 1026
Hin1II CATG 6 cut(s) 245, 270, 417, 925, 964, 1070
HindIII AAGCTT 2 cut(s) 291, 1079
HinfI GANTC 3 cut(s) 66, 181, 654
HpaII CCGG 5 cut(s) 584, 734, 771, 911, 950
HphI GGTGA 1 cut(s) 598
Hpy166II GTNNAC 6 cut(s) 368, 463, 487, 742, 955, 1153
Hpy188I TCNGA 5 cut(s) 219, 396, 603, 865, 1024
Hpy188III TCNNGA 5 cut(s) 77, 189, 284, 874, 1067
Hpy8I GTNNAC 6 cut(s) 368, 463, 487, 742, 955, 1153
HpyAV CCTTC 2 cut(s) 24, 1033
HpyCH4III ACNGT 2 cut(s) 74, 613
HpyCH4IV ACGT 4 cut(s) 193, 981, 1026, 1095
HpyCH4V TGCA 6 cut(s) 62, 96, 175, 786, 925, 1016
HpyF10VI GCNNNNNNNGC 2 cut(s) 56, 126
HpyF3I CTNAG 7 cut(s) 216, 307, 380, 548, 560, 578, 1058
HpySE526I ACGT 4 cut(s) 193, 981, 1026, 1095
Hsp92I GRCGYC 1 cut(s) 1026
Hsp92II CATG 6 cut(s) 245, 270, 417, 925, 964, 1070
Ksp22I TGATCA 3 cut(s) 79, 870, 1063
LmnI GCTCC 1 cut(s) 752
Lsp1109I GCAGC 8 cut(s) 43, 46, 210, 247, 415, 514, 556, 770
LweI GCATC 2 cut(s) 247, 1003
MaeI CTAG 1 cut(s) 360
MaeII ACGT 4 cut(s) 193, 981, 1026, 1095
MaeIII GTNAC 6 cut(s) 142, 158, 200, 534, 551, 766
MbiI CCGCTC 1 cut(s) 215
MboII GAAGA 3 cut(s) 164, 431, 1165
MfeI CAATTG 1 cut(s) 422
MlsI TGGCCA 1 cut(s) 498
MluCI AATT 7 cut(s) 205, 422, 454, 624, 751, 778, 904
MluNI TGGCCA 1 cut(s) 498
MlyI GAGTC 1 cut(s) 648
MmeI TCCRAC 2 cut(s) 419, 818
Mox20I TGGCCA 1 cut(s) 498
MroXI GAANNNNTTC 1 cut(s) 625
MscI TGGCCA 1 cut(s) 498
MseI TTAA 3 cut(s) 453, 918, 1050
MslI CAYNNNNRTG 2 cut(s) 611, 920
Msp20I TGGCCA 1 cut(s) 498
MspA1I CMGCKG 1 cut(s) 569
MspI CCGG 5 cut(s) 584, 734, 771, 911, 950
MspR9I CCNGG 2 cut(s) 584, 735
MunI CAATTG 1 cut(s) 422
Mva1269I GAATGC 1 cut(s) 1141
MvnI CGCG 1 cut(s) 675
MwoI GCNNNNNNNGC 2 cut(s) 56, 126
NciI CCSGG 2 cut(s) 584, 735
NdeI CATATG 1 cut(s) 1113
NheI GCTAGC 1 cut(s) 359
NlaIII CATG 6 cut(s) 245, 270, 417, 925, 964, 1070
NmeAIII GCCGAG 1 cut(s) 31
NmuCI GTSAC 1 cut(s) 534
NspI RCATGY 1 cut(s) 925
NspV TTCGAA 1 cut(s) 974
OliI CACNNNNGTG 1 cut(s) 611
PaeR7I CTCGAG 1 cut(s) 345
PagI TCATGA 1 cut(s) 1066
PctI GAATGC 1 cut(s) 1141
PdmI GAANNNNTTC 1 cut(s) 625
PfeI GAWTC 2 cut(s) 66, 181
PflMI CCANNNNNTGG 1 cut(s) 505
PinAI ACCGGT 1 cut(s) 770
PleI GAGTC 1 cut(s) 648
PpsI GAGTC 1 cut(s) 648
Ppu21I YACGTR 1 cut(s) 1096
PspPI GGNCC 1 cut(s) 773
PspXI VCTCGAGB 1 cut(s) 345
PstI CTGCAG 1 cut(s) 64
PstNI CAGNNNCTG 1 cut(s) 223
PvuII CAGCTG 1 cut(s) 569
RsaI GTAC 5 cut(s) 11, 385, 486, 855, 956
RsaNI GTAC 5 cut(s) 10, 384, 485, 854, 955
RseI CAYNNNNRTG 2 cut(s) 611, 920
SaqAI TTAA 3 cut(s) 453, 918, 1050
Sau96I GGNCC 1 cut(s) 773
ScaI AGTACT 1 cut(s) 385
SchI GAGTC 1 cut(s) 648
ScrFI CCNGG 2 cut(s) 584, 735
SfaNI GCATC 2 cut(s) 247, 1003
SfcI CTRYAG 1 cut(s) 60
Sfr274I CTCGAG 1 cut(s) 345
SfuI TTCGAA 1 cut(s) 974
SinI GGWCC 1 cut(s) 773
SlaI CTCGAG 1 cut(s) 345
SmiMI CAYNNNNRTG 2 cut(s) 611, 920
SmlI CTYRAG 2 cut(s) 345, 687
SmoI CTYRAG 2 cut(s) 345, 687
Sse9I AATT 7 cut(s) 205, 422, 454, 624, 751, 778, 904
SsiI CCGC 4 cut(s) 213, 264, 673, 761
SspMI CTAG 1 cut(s) 360
StyD4I CCNGG 2 cut(s) 582, 733
StyI CCWWGG 1 cut(s) 166
TaaI ACNGT 2 cut(s) 74, 613
TaiI ACGT 4 cut(s) 196, 984, 1029, 1098
TaqI TCGA 3 cut(s) 209, 346, 974
TasI AATT 7 cut(s) 205, 422, 454, 624, 751, 778, 904
TatI WGTACW 3 cut(s) 383, 484, 954
TauI GCSGC 2 cut(s) 266, 764
TfiI GAWTC 2 cut(s) 66, 181
Tru1I TTAA 3 cut(s) 453, 918, 1050
Tru9I TTAA 3 cut(s) 453, 918, 1050
TscAI CASTG 2 cut(s) 510, 618
TseFI GTSAC 1 cut(s) 534
TseI GCWGC 8 cut(s) 56, 59, 223, 260, 428, 527, 569, 783
Tsp45I GTSAC 1 cut(s) 534
TspDTI ATGAA 1 cut(s) 1111
TspRI CASTG 2 cut(s) 510, 618
Van91I CCANNNNNTGG 1 cut(s) 505
VpaK11BI GGWCC 1 cut(s) 773
XagI CCTNNNNNAGG 1 cut(s) 687
XapI RAATTY 1 cut(s) 624
XceI RCATGY 1 cut(s) 925
XcmI CCANNNNNNNNNTGG 1 cut(s) 847
XhoI CTCGAG 1 cut(s) 345
XmiI GTMKAC 1 cut(s) 1152
XmnI GAANNNNTTC 1 cut(s) 625
XspI CTAG 1 cut(s) 360
ZraI GACGTC 1 cut(s) 1027
ZrmI AGTACT 1 cut(s) 385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.