Prupe.3G208700_v2.0.a1
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000706
Physical Location & Seq
Reverse (-)
21465202 .. 21468128
2927 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G208700.1

Sequence Viewer

Length: 1194 bp
ATGTCTAACCCTTCAACCACTCTACTTCTTTTGGCTCTACTCTGTGTTTCAGCAGTTGCAGCAACAAGAACAAAGTTGAACTCAATCAACAATCTGGATGATGGGATTTGCAAGTCAATGGTGGAGACACAAGGCTATACTTGCCAAGAACACGAATTAACAACAGCAGATGGGTACATCCTTGGCTTGCAGAGGATTCCGAATGGACGATCCGGTAATGAGACAGCAGAAAAGCTGCCTGTTCTGTTACAACATGGGGTCTTCCTGGATGCTTCATCATGGCTACTCAATCCGCCGGATCAAGCTTTGCCATTTATCTTGGCTGACAATGGTTTTGATGTATGGCTTGTCAACAGTCGCGGGACAAGCCCTAGCCGCGGACACACATCGCTTAGTCCTAAAGATCCGGCTTACTGGGACTGGTCATGGGATGAATTGGTTGCGTATGATCTTCCTGCTTCATTCCAGTATGTGAACAATCAAACAGGACATAAATTACACTATGTGGGGCATTCCTTGGGAACTTTGACTGCCCTTGCCGCCTTCTCCGAAGAAAAGCTGTTAAACTTGCTAAGATCAGCAGCTTTGCTTAGCCCTGTAGCTTATCTGGGTCACATTTCCTCACTGATTTTAAGACCTGCTGTTGATATATTTGCTGCAGAAAAACTGAAATTGTTGGGCTGGCTGGAATTTCCGAATGGGCAGATCCAACAACTTGTGGAGTTTGTCTGCACAACACGGGGCATTGACTGCTCGAACCTCCTGGCAGCTATAGGAGGCCCAAATTGCTGCCTCAATTCTTCAAGCATAGATGCTTTAGTTGAACATGATCCACAGCCAACTGCGACGAAAAACCTTATACATCTATCTCAGATTGTCAGAAAGGGAACCGTAGAAATGTATGATTATGGTCTTGAAGACACGAACATAAAACACTACAAGAAACCCACTCCTCCTGTGTACAACATGGCAAACATTCCGAAAAACGTTCCTCTTTTCTTCAGCTATGGAGGGAGAGATTCGATTGCTGACGTTAACGATGTGGGGATTTTGCTTGACAAGCTCAGAGATCATGACAGGGACAAGCTTGTGATAGAATACAGAGAGGAGTATGCTCATGTGGATTTTATTATGAGTGTGAATGCCAACCAAGTTGTGTATGGTCCTCTACTGGCCTTCTTCAGGCTCCATTGA

Protein Analysis

398

Amino Acids

43.89

Weight (kDa)

5.5

Isoelectric Point (pI)

38.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000706)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g03230 FvH4_5g03471 FvH4_5g03472 FvH4_6g41950 FvH4_6g41951
malus_domestica MD09G1115700.v1.1 MD09G1115900.v1.1 MD17G1107600.v1.1 MD17G1107700.v1.1
prunus_persica Prupe.3G208700_v2.0.a1 Prupe.3G208800_v2.0.a1 Prupe.5G037500_v2.0.a1
pyrus_communis pycom09g04010 pycom09g04030 pycom17g10020 pycom17g10030
rosa_chinensis RchiOBHm_Chr2g0101861 RchiOBHm_Chr2g0157451 RchiOBHm_Chr2g0157461 RchiOBHm_Chr2g0157841 RchiOBHm_Chr2g0157851 RchiOBHm_Chr3g0484721 RchiOBHm_Chr3g0484731 RchiOBHm_Chr3g0484741 RchiOBHm_Chr3g0484751 RchiOBHm_Chr6g0253931 RchiOBHm_Chr6g0253991
rosa_laevigata RLG00000014950 RLG00000014954 RLG00000020989 RLG00000021024 RLG00000021026 RLG00000021027 RLG00000021029 RLG00000021030
rosa_multiflora Rmu_sc0000195.1_g000023 Rmu_sc0000195.1_g000028 Rmu_sc0001689.1_g000007 Rmu_sc0001716.1_g000018 Rmu_sc0002441.1_g000012 Rmu_sc0004191.1_g000065 Rmu_sc0004473.1_g000004
rosa_roxburghii Rroxscaffold_1G00036760 Rroxscaffold_1G00036780 Rroxscaffold_2G00091900 Rroxscaffold_2G00092180 Rroxscaffold_2G00092200 Rroxscaffold_2G00127230 Rroxscaffold_7G00211340 Rroxscaffold_7G00211380
rosa_rugosa Rorug02G0102500 Rorug02G0206400 Rorug02G0206500 Rorug02G0461400 Rorug02G0464100 Rorug05G0548600 Rorug05G0548800
rosa_samantha Rh2BG155500 Rh2BG540100 Rh2BG540200 Rh2BG543500 Rh2BG543700 Rh2BG543800 Rh3CG296800 Rh6AG064700 Rh6AG065300
rosa_wichuraiana Rw2G020570 Rw2G043520 Rw2G043530 Rw2G043770 Rw2G043780 Rw3G023530 Rw3G023540 Rw6G005750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 646
AccII CGCG 2 cut(s) 360, 378
AciI CCGC 5 cut(s) 293, 360, 376, 378, 540
AclI AACGTT 1 cut(s) 987
AclWI GGATC 5 cut(s) 204, 306, 398, 700, 824
AcsI RAATTY 1 cut(s) 689
AcuI CTGAAG 2 cut(s) 985, 1165
AdeI CACNNNGTG 1 cut(s) 505
AfaI GTAC 2 cut(s) 176, 962
AfiI CCNNNNNNNGG 2 cut(s) 377, 1182
AgsI TTSAA 5 cut(s) 15, 79, 804, 824, 917
AjnI CCWGG 2 cut(s) 264, 762
AluBI AGCT 9 cut(s) 235, 305, 559, 584, 602, 770, 1005, 1063, 1087
AluI AGCT 9 cut(s) 235, 305, 559, 584, 602, 770, 1005, 1063, 1087
Alw26I GTCTC 2 cut(s) 119, 215
AlwI GGATC 5 cut(s) 204, 306, 398, 700, 824
AoxI GGCC 2 cut(s) 778, 1173
ApeKI GCWGC 6 cut(s) 59, 235, 581, 656, 767, 789
ApoI RAATTY 1 cut(s) 689
ArsI GACNNNNNNTTYG 2 cut(s) 317, 349
AspS9I GGNCC 2 cut(s) 779, 1163
AvaII GGWCC 1 cut(s) 1163
BbsI GAAGAC 2 cut(s) 253, 924
BbvI GCAGC 6 cut(s) 71, 222, 593, 643, 776, 779
BccI CCATC 2 cut(s) 95, 164
BciT130I CCWGG 2 cut(s) 266, 764
BcoDI GTCTC 2 cut(s) 119, 215
BfaI CTAG 1 cut(s) 372
BfmI CTRYAG 3 cut(s) 597, 657, 771
BfuAI ACCTGC 1 cut(s) 646
BisI GCNGC 8 cut(s) 60, 236, 376, 540, 582, 657, 768, 790
BlpI GCTNAGC 1 cut(s) 590
BlsI GCNGC 8 cut(s) 61, 237, 377, 541, 583, 658, 769, 791
Bme1390I CCNGG 2 cut(s) 266, 764
Bme18I GGWCC 1 cut(s) 1163
BmgT120I GGNCC 2 cut(s) 779, 1163
BmiI GGNNCC 2 cut(s) 889, 1187
BmrFI CCNGG 2 cut(s) 266, 764
BmrI ACTGGG 1 cut(s) 424
BmsI GCATC 2 cut(s) 259, 802
BmuI ACTGGG 1 cut(s) 424
BpiI GAAGAC 2 cut(s) 253, 924
Bpu1102I GCTNAGC 1 cut(s) 590
BsaJI CCNNGG 3 cut(s) 181, 376, 516
BsaWI WCCGGW 1 cut(s) 212
Bsc4I CCNNNNNNNGG 2 cut(s) 377, 1182
Bse1I ACTGG 4 cut(s) 419, 425, 466, 1176
BseBI CCWGG 2 cut(s) 266, 764
BseDI CCNNGG 3 cut(s) 181, 376, 516
BseGI GGATG 4 cut(s) 103, 177, 274, 436
BseLI CCNNNNNNNGG 2 cut(s) 377, 1182
BseMII CTCAG 2 cut(s) 884, 1078
BseNI ACTGG 4 cut(s) 419, 425, 466, 1176
BseRI GAGGAG 2 cut(s) 942, 1121
BseXI GCAGC 6 cut(s) 71, 222, 593, 643, 776, 779
BsgI GTGCAG 1 cut(s) 715
Bsh1236I CGCG 2 cut(s) 360, 378
BshFI GGCC 2 cut(s) 780, 1175
BsiSI CCGG 3 cut(s) 213, 296, 407
BslFI GGGAC 3 cut(s) 376, 431, 1094
BslI CCNNNNNNNGG 2 cut(s) 377, 1182
BsmAI GTCTC 2 cut(s) 119, 215
BsmFI GGGAC 3 cut(s) 376, 431, 1094
BsmI GAATGC 2 cut(s) 511, 1147
BsnI GGCC 2 cut(s) 780, 1175
Bsp1407I TGTACA 1 cut(s) 960
Bsp143I GATC 8 cut(s) 209, 298, 403, 448, 575, 705, 829, 1069
Bsp1720I GCTNAGC 1 cut(s) 590
BspACI CCGC 5 cut(s) 293, 360, 376, 378, 540
BspANI GGCC 2 cut(s) 780, 1175
BspCNI CTCAG 2 cut(s) 883, 1077
BspFNI CGCG 2 cut(s) 360, 378
BspHI TCATGA 1 cut(s) 1072
BspLI GGNNCC 2 cut(s) 889, 1187
BspMAI CTGCAG 1 cut(s) 661
BspMI ACCTGC 1 cut(s) 646
BspPI GGATC 5 cut(s) 204, 306, 398, 700, 824
BsrGI TGTACA 1 cut(s) 960
BsrI ACTGG 4 cut(s) 419, 425, 466, 1176
BssECI CCNNGG 3 cut(s) 181, 376, 516
BssMI GATC 8 cut(s) 209, 298, 403, 448, 575, 705, 829, 1069
BssT1I CCWWGG 2 cut(s) 181, 516
Bst2UI CCWGG 2 cut(s) 266, 764
Bst4CI ACNGT 2 cut(s) 356, 892
BstAPI GCANNNNNTGC 1 cut(s) 750
BstAUI TGTACA 1 cut(s) 960
BstC8I GCNNGC 2 cut(s) 188, 683
BstDEI CTNAG 5 cut(s) 392, 572, 590, 870, 1064
BstDSI CCRYGG 1 cut(s) 376
BstENI CCTNNNNNAGG 1 cut(s) 1180
BstF5I GGATG 4 cut(s) 103, 177, 274, 436
BstFNI CGCG 2 cut(s) 360, 378
BstKTI GATC 8 cut(s) 212, 301, 406, 451, 578, 708, 832, 1072
BstMAI GTCTC 2 cut(s) 119, 215
BstMBI GATC 8 cut(s) 209, 298, 403, 448, 575, 705, 829, 1069
BstMWI GCNNNNNNNGC 8 cut(s) 59, 141, 366, 375, 539, 750, 786, 1060
BstNI CCWGG 2 cut(s) 266, 764
BstSCI CCNGG 2 cut(s) 264, 762
BstSFI CTRYAG 3 cut(s) 597, 657, 771
BstUI CGCG 2 cut(s) 360, 378
BstV1I GCAGC 6 cut(s) 71, 222, 593, 643, 776, 779
BstV2I GAAGAC 2 cut(s) 253, 924
BstX2I RGATCY 2 cut(s) 403, 705
BstYI RGATCY 2 cut(s) 403, 705
BsuRI GGCC 2 cut(s) 780, 1175
BtgI CCRYGG 1 cut(s) 376
BtgZI GCGATG 1 cut(s) 372
BtsCI GGATG 4 cut(s) 103, 177, 274, 436
BtsIMutI CAGTG 1 cut(s) 623
BveI ACCTGC 1 cut(s) 646
Cac8I GCNNGC 2 cut(s) 188, 683
CciI TCATGA 1 cut(s) 1072
Cfr13I GGNCC 2 cut(s) 779, 1163
Cfr42I CCGCGG 1 cut(s) 379
Csp6I GTAC 2 cut(s) 175, 961
CviAII CATG 7 cut(s) 254, 279, 426, 827, 967, 1073, 1118
CviQI GTAC 2 cut(s) 175, 961
DdeI CTNAG 5 cut(s) 392, 572, 590, 870, 1064
DpnI GATC 8 cut(s) 211, 300, 405, 450, 577, 707, 831, 1071
DpnII GATC 8 cut(s) 209, 298, 403, 448, 575, 705, 829, 1069
DraIII CACNNNGTG 1 cut(s) 505
EciI GGCGGA 1 cut(s) 282
Eco130I CCWWGG 2 cut(s) 181, 516
Eco47I GGWCC 1 cut(s) 1163
Eco57I CTGAAG 2 cut(s) 985, 1165
EcoNI CCTNNNNNAGG 1 cut(s) 1180
EcoRII CCWGG 2 cut(s) 264, 762
EcoT14I CCWWGG 2 cut(s) 181, 516
ErhI CCWWGG 2 cut(s) 181, 516
FaeI CATG 7 cut(s) 257, 282, 429, 830, 970, 1076, 1121
FaqI GGGAC 3 cut(s) 376, 431, 1094
FatI CATG 7 cut(s) 253, 278, 425, 826, 966, 1072, 1117
FauI CCCGC 1 cut(s) 353
Fnu4HI GCNGC 8 cut(s) 60, 236, 376, 540, 582, 657, 768, 790
FokI GGATG 4 cut(s) 110, 164, 281, 443
Fsp4HI GCNGC 8 cut(s) 60, 236, 376, 540, 582, 657, 768, 790
FspBI CTAG 1 cut(s) 372
GluI GCNGC 8 cut(s) 60, 236, 376, 540, 582, 657, 768, 790
HaeIII GGCC 2 cut(s) 780, 1175
HapII CCGG 3 cut(s) 213, 296, 407
Hin1II CATG 7 cut(s) 257, 282, 429, 830, 970, 1076, 1121
HincII GTYRAC 2 cut(s) 352, 1036
HindII GTYRAC 2 cut(s) 352, 1036
HindIII AAGCTT 2 cut(s) 303, 1085
HinfI GANTC 2 cut(s) 196, 1019
HpaI GTTAAC 1 cut(s) 1036
HpaII CCGG 3 cut(s) 213, 296, 407
Hpy166II GTNNAC 4 cut(s) 352, 475, 961, 1036
Hpy188I TCNGA 7 cut(s) 201, 550, 696, 873, 881, 981, 1067
Hpy188III TCNNGA 3 cut(s) 95, 914, 1073
Hpy8I GTNNAC 4 cut(s) 352, 475, 961, 1036
Hpy99I CGWCG 1 cut(s) 850
HpyAV CCTTC 3 cut(s) 21, 553, 1186
HpyCH4III ACNGT 2 cut(s) 356, 892
HpyCH4IV ACGT 2 cut(s) 987, 1032
HpyCH4V TGCA 5 cut(s) 59, 111, 190, 659, 732
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 141, 366, 375, 539, 750, 786, 1060
HpyF3I CTNAG 5 cut(s) 392, 572, 590, 870, 1064
HpySE526I ACGT 2 cut(s) 987, 1032
Hsp92II CATG 7 cut(s) 257, 282, 429, 830, 970, 1076, 1121
KspAI GTTAAC 1 cut(s) 1036
KspI CCGCGG 1 cut(s) 379
Kzo9I GATC 8 cut(s) 209, 298, 403, 448, 575, 705, 829, 1069
LmnI GCTCC 1 cut(s) 1191
Lsp1109I GCAGC 6 cut(s) 71, 222, 593, 643, 776, 779
LweI GCATC 2 cut(s) 259, 802
MaeI CTAG 1 cut(s) 372
MaeII ACGT 2 cut(s) 987, 1032
MaeIII GTNAC 2 cut(s) 246, 611
MalI GATC 8 cut(s) 211, 300, 405, 450, 577, 707, 831, 1071
MboI GATC 8 cut(s) 209, 298, 403, 448, 575, 705, 829, 1069
MboII GAAGA 7 cut(s) 253, 443, 563, 792, 929, 991, 1171
MflI RGATCY 2 cut(s) 403, 705
MluCI AATT 7 cut(s) 155, 434, 494, 671, 689, 784, 796
MmeI TCCRAC 1 cut(s) 733
MseI TTAA 4 cut(s) 158, 563, 632, 1035
MspA1I CMGCKG 1 cut(s) 378
MspI CCGG 3 cut(s) 213, 296, 407
MspR9I CCNGG 2 cut(s) 266, 764
Mva1269I GAATGC 2 cut(s) 511, 1147
MvaI CCWGG 2 cut(s) 266, 764
MvnI CGCG 2 cut(s) 360, 378
MwoI GCNNNNNNNGC 8 cut(s) 59, 141, 366, 375, 539, 750, 786, 1060
NdeII GATC 8 cut(s) 209, 298, 403, 448, 575, 705, 829, 1069
NlaIII CATG 7 cut(s) 257, 282, 429, 830, 970, 1076, 1121
NlaIV GGNNCC 2 cut(s) 889, 1187
NmuCI GTSAC 1 cut(s) 611
PagI TCATGA 1 cut(s) 1072
PctI GAATGC 2 cut(s) 511, 1147
PfeI GAWTC 2 cut(s) 196, 1019
PfoI TCCNGGA 1 cut(s) 264
PkrI GCNGC 8 cut(s) 61, 237, 377, 541, 583, 658, 769, 791
Psp1406I AACGTT 1 cut(s) 987
Psp6I CCWGG 2 cut(s) 264, 762
PspGI CCWGG 2 cut(s) 264, 762
PspN4I GGNNCC 2 cut(s) 889, 1187
PspPI GGNCC 2 cut(s) 779, 1163
PstI CTGCAG 1 cut(s) 661
PsuI RGATCY 2 cut(s) 403, 705
RsaI GTAC 2 cut(s) 176, 962
RsaNI GTAC 2 cut(s) 175, 961
SacII CCGCGG 1 cut(s) 379
SaqAI TTAA 4 cut(s) 158, 563, 632, 1035
SatI GCNGC 8 cut(s) 60, 236, 376, 540, 582, 657, 768, 790
Sau3AI GATC 8 cut(s) 209, 298, 403, 448, 575, 705, 829, 1069
Sau96I GGNCC 2 cut(s) 779, 1163
ScrFI CCNGG 2 cut(s) 266, 764
SfaNI GCATC 2 cut(s) 259, 802
SfcI CTRYAG 3 cut(s) 597, 657, 771
Sfr303I CCGCGG 1 cut(s) 379
SgrBI CCGCGG 1 cut(s) 379
SinI GGWCC 1 cut(s) 1163
Sse9I AATT 7 cut(s) 155, 434, 494, 671, 689, 784, 796
SsiI CCGC 5 cut(s) 293, 360, 376, 378, 540
SspMI CTAG 1 cut(s) 372
StyD4I CCNGG 2 cut(s) 264, 762
StyI CCWWGG 2 cut(s) 181, 516
TaaI ACNGT 2 cut(s) 356, 892
TaiI ACGT 2 cut(s) 990, 1035
TaqI TCGA 2 cut(s) 755, 1022
TasI AATT 7 cut(s) 155, 434, 494, 671, 689, 784, 796
TatI WGTACW 1 cut(s) 960
TauI GCSGC 2 cut(s) 378, 542
TfiI GAWTC 2 cut(s) 196, 1019
Tru1I TTAA 4 cut(s) 158, 563, 632, 1035
Tru9I TTAA 4 cut(s) 158, 563, 632, 1035
TscAI CASTG 1 cut(s) 630
TseFI GTSAC 1 cut(s) 611
TseI GCWGC 6 cut(s) 59, 235, 581, 656, 767, 789
Tsp45I GTSAC 1 cut(s) 611
TspDTI ATGAA 3 cut(s) 264, 447, 450
TspRI CASTG 1 cut(s) 630
VpaK11BI GGWCC 1 cut(s) 1163
XagI CCTNNNNNAGG 1 cut(s) 1180
XapI RAATTY 1 cut(s) 689
XcmI CCANNNNNNNNNTGG 1 cut(s) 1157
XspI CTAG 1 cut(s) 372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.