Prupe.5G037500_v2.0.a1
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000706
Physical Location & Seq
Reverse (-)
4210113 .. 4212451
2339 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G037500.1

Sequence Viewer

Length: 1149 bp
ATGGCCAACCCTTTGAGCACTCTACTTCTTGTGGCTCTACTTTCTCTTTCAGCTGCTGCAGCAACAAGAACTAAGCTGCAACCAACCAACAATGTGGATGGTGGCATTTGCAAATCATTGGTGGAGACACAAGGCTATGCTTGCGAAGAACATAAAGTAACAACAGCAGATGGTTATGTCCTTGGCTTGCAAAGGATTCCAGCTGGTCGGTCCGGTAACAAGACAGCAGCTAAGCTGCCTGTTTTGTTACAACATGGACTCCTTATGGATGCTTCAGCTTGGCTGCTCAATGAGCCGGATAAGGCTTTGGCATTCATCTTGGCAGATAAGGGTTTTGATGTATGGCTTGCCAACGCTCGCGGGACAGAATCTAGCCGCGGACACACATCACTTAGCCCTAATGATCCGGCATACTGGGACTGGTCATGGGATGAATTGACTGCTTATGATCTTCCTGCTGCATTCCAGTATGTGAACAATCAAACAGGACAGAAATTACACTATGTTGGTCATTCCTTGGGAACTTTGACTGCCCTTGCCGCCTTCTCCCAAGAAAAGCTGTTAAACCTGCTAAGATCAGCTGCTTTGCTTAGTCCAATTGCTTATCTTGGTCAGATATCGCCGTTTGGAAGAACTGCTGCCGACATATTTTTAGCTCAAGTGAACCGACTTTTGGATTTTATCTGCACAAGACCAGGCATTGACTGCTCCAACTTTCTATCAGTTACAACAGGCCCAAATTGCTGCCTCAGTTCTTCAAGCATTGATGCTCTTTTTAAGCATACGCCACAGACCACTTCGACAAAGAATGCTCTACATCTCTTTCAGATGGTCAGAAAGGGCACCATAGAAATGTATGATTACGGTCTGCCAATCACAAACATGCAGCACTACAGGCAGCCTACTCCTCCTGTGTACAACATGGCAAACATTCCGAAAGATGTTCCTCTATTCCTCAGCTATGGAGGGAGGGATCTGCTTTCGAACGTGTTTGATGTGAACCTTTTGCTGGACAACCTCAAAGATCATGACAAGGACAAGCTTGTGGTACAGTTCAGAGAGGATTATGCCCATATGGATTTTATTATGGCTATGAATGCCAATCAAGTTGTGTATGATCCTCTACTTTCCTTCTTTAGGCTCCATTGA

Protein Analysis

383

Amino Acids

42.14

Weight (kDa)

6.25

Isoelectric Point (pI)

34.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000706)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g03230 FvH4_5g03471 FvH4_5g03472 FvH4_6g41950 FvH4_6g41951
malus_domestica MD09G1115700.v1.1 MD09G1115900.v1.1 MD17G1107600.v1.1 MD17G1107700.v1.1
prunus_persica Prupe.3G208700_v2.0.a1 Prupe.3G208800_v2.0.a1 Prupe.5G037500_v2.0.a1
pyrus_communis pycom09g04010 pycom09g04030 pycom17g10020 pycom17g10030
rosa_chinensis RchiOBHm_Chr2g0101861 RchiOBHm_Chr2g0157451 RchiOBHm_Chr2g0157461 RchiOBHm_Chr2g0157841 RchiOBHm_Chr2g0157851 RchiOBHm_Chr3g0484721 RchiOBHm_Chr3g0484731 RchiOBHm_Chr3g0484741 RchiOBHm_Chr3g0484751 RchiOBHm_Chr6g0253931 RchiOBHm_Chr6g0253991
rosa_laevigata RLG00000014950 RLG00000014954 RLG00000020989 RLG00000021024 RLG00000021026 RLG00000021027 RLG00000021029 RLG00000021030
rosa_multiflora Rmu_sc0000195.1_g000023 Rmu_sc0000195.1_g000028 Rmu_sc0001689.1_g000007 Rmu_sc0001716.1_g000018 Rmu_sc0002441.1_g000012 Rmu_sc0004191.1_g000065 Rmu_sc0004473.1_g000004
rosa_roxburghii Rroxscaffold_1G00036760 Rroxscaffold_1G00036780 Rroxscaffold_2G00091900 Rroxscaffold_2G00092180 Rroxscaffold_2G00092200 Rroxscaffold_2G00127230 Rroxscaffold_7G00211340 Rroxscaffold_7G00211380
rosa_rugosa Rorug02G0102500 Rorug02G0206400 Rorug02G0206500 Rorug02G0461400 Rorug02G0464100 Rorug05G0548600 Rorug05G0548800
rosa_samantha Rh2BG155500 Rh2BG540100 Rh2BG540200 Rh2BG543500 Rh2BG543700 Rh2BG543800 Rh3CG296800 Rh6AG064700 Rh6AG065300
rosa_wichuraiana Rw2G020570 Rw2G043520 Rw2G043530 Rw2G043770 Rw2G043780 Rw3G023530 Rw3G023540 Rw6G005750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 576
AccB1I GGYRCC 1 cut(s) 842
AccII CGCG 2 cut(s) 360, 378
AciI CCGC 4 cut(s) 360, 376, 378, 540
AclWI GGATC 3 cut(s) 398, 981, 1112
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 258
AfaI GTAC 2 cut(s) 917, 1050
AfiI CCNNNNNNNGG 3 cut(s) 673, 1009, 1137
AflIII ACRYGT 1 cut(s) 987
AgsI TTSAA 1 cut(s) 759
AjnI CCWGG 1 cut(s) 694
AjuI GAANNNNNNNTTGG 2 cut(s) 656, 688
Alw21I GWGCWC 1 cut(s) 20
Alw26I GTCTC 1 cut(s) 119
AlwI GGATC 3 cut(s) 398, 981, 1112
AlwNI CAGNNNCTG 1 cut(s) 56
AoxI GGCC 2 cut(s) 3, 733
AspS9I GGNCC 2 cut(s) 210, 734
AsuII TTCGAA 1 cut(s) 983
AvaII GGWCC 1 cut(s) 210
BaeGI GKGCMC 1 cut(s) 845
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 842
Bbv12I GWGCWC 1 cut(s) 20
BbvCI CCTCAGC 1 cut(s) 956
BccI CCATC 3 cut(s) 92, 164, 823
BceAI ACGGC 1 cut(s) 607
BciT130I CCWGG 1 cut(s) 696
BcoDI GTCTC 1 cut(s) 119
BfaI CTAG 1 cut(s) 372
BfmI CTRYAG 2 cut(s) 57, 892
BfuAI ACCTGC 1 cut(s) 576
BlpI GCTNAGC 1 cut(s) 231
Bme1390I CCNGG 1 cut(s) 696
Bme18I GGWCC 1 cut(s) 210
BmgT120I GGNCC 2 cut(s) 210, 734
BmiI GGNNCC 2 cut(s) 844, 1142
BmrFI CCNGG 1 cut(s) 696
BmrI ACTGGG 1 cut(s) 424
BmsI GCATC 2 cut(s) 259, 757
BmuI ACTGGG 1 cut(s) 424
Bpu10I CCTNAGC 1 cut(s) 956
Bpu1102I GCTNAGC 1 cut(s) 231
Bpu14I TTCGAA 1 cut(s) 983
BpuEI CTTGAG 1 cut(s) 642
BsaJI CCNNGG 3 cut(s) 181, 376, 516
BsaWI WCCGGW 1 cut(s) 212
BsaXI ACNNNNNCTCC 2 cut(s) 243, 273
Bsc4I CCNNNNNNNGG 3 cut(s) 673, 1009, 1137
Bse1I ACTGG 3 cut(s) 419, 425, 466
BseBI CCWGG 1 cut(s) 696
BseDI CCNNGG 3 cut(s) 181, 376, 516
BseGI GGATG 3 cut(s) 103, 274, 436
BseLI CCNNNNNNNGG 3 cut(s) 673, 1009, 1137
BseMII CTCAG 2 cut(s) 763, 970
BseNI ACTGG 3 cut(s) 419, 425, 466
BseRI GAGGAG 1 cut(s) 897
BseSI GKGCMC 1 cut(s) 845
BsgI GTGCAG 1 cut(s) 670
Bsh1236I CGCG 2 cut(s) 360, 378
BshFI GGCC 2 cut(s) 5, 735
BshNI GGYRCC 1 cut(s) 842
BsiHKAI GWGCWC 1 cut(s) 20
BsiSI CCGG 3 cut(s) 213, 296, 407
BslFI GGGAC 2 cut(s) 376, 431
BslI CCNNNNNNNGG 3 cut(s) 673, 1009, 1137
BsmAI GTCTC 1 cut(s) 119
BsmFI GGGAC 2 cut(s) 376, 431
BsmI GAATGC 4 cut(s) 311, 461, 814, 1102
BsnI GGCC 2 cut(s) 5, 735
Bsp119I TTCGAA 1 cut(s) 983
Bsp1286I GDGCHC 2 cut(s) 20, 845
Bsp1407I TGTACA 1 cut(s) 915
Bsp143I GATC 6 cut(s) 403, 448, 575, 973, 1024, 1117
Bsp1720I GCTNAGC 1 cut(s) 231
BspACI CCGC 4 cut(s) 360, 376, 378, 540
BspANI GGCC 2 cut(s) 5, 735
BspCNI CTCAG 2 cut(s) 762, 969
BspFNI CGCG 2 cut(s) 360, 378
BspHI TCATGA 1 cut(s) 1027
BspLI GGNNCC 2 cut(s) 844, 1142
BspMAI CTGCAG 1 cut(s) 61
BspMI ACCTGC 1 cut(s) 576
BspPI GGATC 3 cut(s) 398, 981, 1112
BspT104I TTCGAA 1 cut(s) 983
BspT107I GGYRCC 1 cut(s) 842
BsrGI TGTACA 1 cut(s) 915
BsrI ACTGG 3 cut(s) 419, 425, 466
BssECI CCNNGG 3 cut(s) 181, 376, 516
BssMI GATC 6 cut(s) 403, 448, 575, 973, 1024, 1117
BssT1I CCWWGG 2 cut(s) 181, 516
Bst2UI CCWGG 1 cut(s) 696
Bst4CI ACNGT 2 cut(s) 866, 1053
BstAPI GCANNNNNTGC 1 cut(s) 705
BstAUI TGTACA 1 cut(s) 915
BstBI TTCGAA 1 cut(s) 983
BstC8I GCNNGC 4 cut(s) 142, 188, 348, 358
BstDEI CTNAG 7 cut(s) 72, 231, 392, 572, 590, 749, 956
BstDSI CCRYGG 1 cut(s) 376
BstENI CCTNNNNNAGG 1 cut(s) 1135
BstF5I GGATG 3 cut(s) 103, 274, 436
BstFNI CGCG 2 cut(s) 360, 378
BstKTI GATC 6 cut(s) 406, 451, 578, 976, 1027, 1120
BstMAI GTCTC 1 cut(s) 119
BstMBI GATC 6 cut(s) 403, 448, 575, 973, 1024, 1117
BstMWI GCNNNNNNNGC 8 cut(s) 59, 141, 292, 539, 705, 741, 895, 1097
BstNI CCWGG 1 cut(s) 696
BstNSI RCATGY 1 cut(s) 886
BstSCI CCNGG 1 cut(s) 694
BstSFI CTRYAG 2 cut(s) 57, 892
BstSLI GKGCMC 1 cut(s) 845
BstUI CGCG 2 cut(s) 360, 378
BstX2I RGATCY 1 cut(s) 973
BstXI CCANNNNNNTGG 1 cut(s) 94
BstYI RGATCY 1 cut(s) 973
BsuRI GGCC 2 cut(s) 5, 735
BtgI CCRYGG 1 cut(s) 376
BtsCI GGATG 3 cut(s) 103, 274, 436
BveI ACCTGC 1 cut(s) 576
Cac8I GCNNGC 4 cut(s) 142, 188, 348, 358
CaiI CAGNNNCTG 1 cut(s) 56
CciI TCATGA 1 cut(s) 1027
Cfr13I GGNCC 2 cut(s) 210, 734
Cfr42I CCGCGG 1 cut(s) 379
CpoI CGGWCCG 1 cut(s) 210
Csp6I GTAC 2 cut(s) 916, 1049
CspI CGGWCCG 1 cut(s) 210
CviAII CATG 5 cut(s) 254, 426, 883, 922, 1028
CviQI GTAC 2 cut(s) 916, 1049
DdeI CTNAG 7 cut(s) 72, 231, 392, 572, 590, 749, 956
DpnI GATC 6 cut(s) 405, 450, 577, 975, 1026, 1119
DpnII GATC 6 cut(s) 403, 448, 575, 973, 1024, 1117
EaeI YGGCCR 1 cut(s) 3
Eco130I CCWWGG 2 cut(s) 181, 516
Eco32I GATATC 1 cut(s) 618
Eco47I GGWCC 1 cut(s) 210
Eco57I CTGAAG 1 cut(s) 258
EcoNI CCTNNNNNAGG 1 cut(s) 1135
EcoRII CCWGG 1 cut(s) 694
EcoRV GATATC 1 cut(s) 618
EcoT14I CCWWGG 2 cut(s) 181, 516
ErhI CCWWGG 2 cut(s) 181, 516
FaeI CATG 5 cut(s) 257, 429, 886, 925, 1031
FaqI GGGAC 2 cut(s) 376, 431
FatI CATG 5 cut(s) 253, 425, 882, 921, 1027
FauI CCCGC 1 cut(s) 353
FauNDI CATATG 1 cut(s) 1074
FokI GGATG 3 cut(s) 110, 281, 443
FspBI CTAG 1 cut(s) 372
HaeIII GGCC 2 cut(s) 5, 735
HapII CCGG 3 cut(s) 213, 296, 407
Hin1II CATG 5 cut(s) 257, 429, 886, 925, 1031
HindIII AAGCTT 1 cut(s) 1040
HinfI GANTC 3 cut(s) 196, 258, 368
HpaII CCGG 3 cut(s) 213, 296, 407
Hpy166II GTNNAC 4 cut(s) 475, 664, 916, 1000
Hpy188I TCNGA 5 cut(s) 615, 828, 836, 936, 1058
Hpy188III TCNNGA 1 cut(s) 1028
Hpy8I GTNNAC 4 cut(s) 475, 664, 916, 1000
HpyAV CCTTC 2 cut(s) 553, 1141
HpyCH4III ACNGT 2 cut(s) 866, 1053
HpyCH4IV ACGT 1 cut(s) 987
HpyCH4V TGCA 7 cut(s) 59, 79, 111, 190, 461, 687, 886
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 141, 292, 539, 705, 741, 895, 1097
HpyF3I CTNAG 7 cut(s) 72, 231, 392, 572, 590, 749, 956
HpySE526I ACGT 1 cut(s) 987
Hsp92II CATG 5 cut(s) 257, 429, 886, 925, 1031
KspI CCGCGG 1 cut(s) 379
Kzo9I GATC 6 cut(s) 403, 448, 575, 973, 1024, 1117
LmnI GCTCC 2 cut(s) 713, 1146
LweI GCATC 2 cut(s) 259, 757
MaeI CTAG 1 cut(s) 372
MaeII ACGT 1 cut(s) 987
MaeIII GTNAC 4 cut(s) 157, 215, 246, 724
MalI GATC 6 cut(s) 405, 450, 577, 975, 1026, 1119
MboI GATC 6 cut(s) 403, 448, 575, 973, 1024, 1117
MboII GAAGA 4 cut(s) 158, 443, 642, 747
MfeI CAATTG 1 cut(s) 597
MflI RGATCY 1 cut(s) 973
MhlI GDGCHC 2 cut(s) 20, 845
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 434, 494, 597, 739
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 252
MmeI TCCRAC 1 cut(s) 735
MnlI CCTC 9 cut(s) 758, 918, 957, 959, 963, 965, 1028, 1054, 1131
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 563, 777
MslI CAYNNNNRTG 2 cut(s) 851, 881
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 4 cut(s) 53, 203, 378, 581
MspI CCGG 3 cut(s) 213, 296, 407
MspR9I CCNGG 1 cut(s) 696
MunI CAATTG 1 cut(s) 597
Mva1269I GAATGC 4 cut(s) 311, 461, 814, 1102
MvaI CCWGG 1 cut(s) 696
MvnI CGCG 2 cut(s) 360, 378
MwoI GCNNNNNNNGC 8 cut(s) 59, 141, 292, 539, 705, 741, 895, 1097
NdeI CATATG 1 cut(s) 1074
NdeII GATC 6 cut(s) 403, 448, 575, 973, 1024, 1117
NlaIII CATG 5 cut(s) 257, 429, 886, 925, 1031
NlaIV GGNNCC 2 cut(s) 844, 1142
NspI RCATGY 1 cut(s) 886
NspV TTCGAA 1 cut(s) 983
PagI TCATGA 1 cut(s) 1027
PctI GAATGC 4 cut(s) 311, 461, 814, 1102
PfeI GAWTC 2 cut(s) 196, 368
PleI GAGTC 1 cut(s) 252
PpsI GAGTC 1 cut(s) 252
Psp6I CCWGG 1 cut(s) 694
PspGI CCWGG 1 cut(s) 694
PspN4I GGNNCC 2 cut(s) 844, 1142
PspPI GGNCC 2 cut(s) 210, 734
PstI CTGCAG 1 cut(s) 61
PstNI CAGNNNCTG 1 cut(s) 56
PsuI RGATCY 1 cut(s) 973
PvuII CAGCTG 3 cut(s) 53, 203, 581
RsaI GTAC 2 cut(s) 917, 1050
RsaNI GTAC 2 cut(s) 916, 1049
RseI CAYNNNNRTG 2 cut(s) 851, 881
Rsr2I CGGWCCG 1 cut(s) 210
RsrII CGGWCCG 1 cut(s) 210
SacII CCGCGG 1 cut(s) 379
SaqAI TTAA 2 cut(s) 563, 777
Sau3AI GATC 6 cut(s) 403, 448, 575, 973, 1024, 1117
Sau96I GGNCC 2 cut(s) 210, 734
SchI GAGTC 1 cut(s) 252
ScrFI CCNGG 1 cut(s) 696
SduI GDGCHC 2 cut(s) 20, 845
SfaNI GCATC 2 cut(s) 259, 757
SfcI CTRYAG 2 cut(s) 57, 892
Sfr303I CCGCGG 1 cut(s) 379
SfuI TTCGAA 1 cut(s) 983
SgrBI CCGCGG 1 cut(s) 379
SinI GGWCC 1 cut(s) 210
SmiMI CAYNNNNRTG 2 cut(s) 851, 881
SmlI CTYRAG 1 cut(s) 657
SmoI CTYRAG 1 cut(s) 657
Sse9I AATT 4 cut(s) 434, 494, 597, 739
SsiI CCGC 4 cut(s) 360, 376, 378, 540
SspMI CTAG 1 cut(s) 372
StyD4I CCNGG 1 cut(s) 694
StyI CCWWGG 2 cut(s) 181, 516
TaaI ACNGT 2 cut(s) 866, 1053
TaiI ACGT 1 cut(s) 990
TaqI TCGA 2 cut(s) 800, 983
TaqII GACCGA 1 cut(s) 198
TasI AATT 4 cut(s) 434, 494, 597, 739
TatI WGTACW 1 cut(s) 915
TauI GCSGC 2 cut(s) 378, 542
TfiI GAWTC 2 cut(s) 196, 368
Tru1I TTAA 2 cut(s) 563, 777
Tru9I TTAA 2 cut(s) 563, 777
TspDTI ATGAA 3 cut(s) 304, 447, 1109
VpaK11BI GGWCC 1 cut(s) 210
XagI CCTNNNNNAGG 1 cut(s) 1135
XceI RCATGY 1 cut(s) 886
XspI CTAG 1 cut(s) 372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.