Rh3CG296800
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
30406907 .. 30412897
5991 bp
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UTR
Exon/CDS
Intron
Rh3CG296800.1

Sequence Viewer

Length: 228 bp
ATGGCCAAGTACCCTTCAAACCCTCTGCTTCTTGTGGCTCTACTTTGTGCTTTTGCAGCTGCAGGAATCAACAGTCTTGATCAAAATGGTATTTGCAAATCATTGGTGGGGACACAAGGCTATACTTGCCAAGACCATCAAAGAGTAGAATTTAAAGGAGAAGAATGGAGGCTAGAAGACGAAACCCATGAGGTGGAGTTCGATGGCGCGGCAGGTTCCAAGAACTAG

Protein Analysis

75

Amino Acids

8.19

Weight (kDa)

4.74

Isoelectric Point (pI)

8.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000706)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 203
AccB7I CCANNNNNTGG 1 cut(s) 193
AccII CGCG 1 cut(s) 209
AciI CCGC 1 cut(s) 209
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 149
AfaI GTAC 1 cut(s) 11
AfiI CCNNNNNNNGG 1 cut(s) 193
AgsI TTSAA 1 cut(s) 18
AluBI AGCT 1 cut(s) 59
AluI AGCT 1 cut(s) 59
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 2 cut(s) 56, 59
ApoI RAATTY 1 cut(s) 149
AspLEI GCGC 1 cut(s) 209
BalI TGGCCA 1 cut(s) 5
BbsI GAAGAC 1 cut(s) 183
BbvI GCAGC 2 cut(s) 46, 68
BccI CCATC 2 cut(s) 144, 197
BclI TGATCA 1 cut(s) 79
BfaI CTAG 2 cut(s) 173, 226
BfmI CTRYAG 1 cut(s) 60
BfuAI ACCTGC 1 cut(s) 203
BisI GCNGC 3 cut(s) 57, 60, 210
BlsI GCNGC 3 cut(s) 58, 61, 211
BmiI GGNNCC 1 cut(s) 217
BpiI GAAGAC 1 cut(s) 183
Bsc4I CCNNNNNNNGG 1 cut(s) 193
BseLI CCNNNNNNNGG 1 cut(s) 193
BseXI GCAGC 2 cut(s) 46, 68
Bsh1236I CGCG 1 cut(s) 209
BshFI GGCC 1 cut(s) 5
BslFI GGGAC 1 cut(s) 124
BslI CCNNNNNNNGG 1 cut(s) 193
BsmFI GGGAC 1 cut(s) 124
BsnI GGCC 1 cut(s) 5
Bsp143I GATC 1 cut(s) 79
BspACI CCGC 1 cut(s) 209
BspANI GGCC 1 cut(s) 5
BspFNI CGCG 1 cut(s) 209
BspLI GGNNCC 1 cut(s) 217
BspMAI CTGCAG 1 cut(s) 64
BspMI ACCTGC 1 cut(s) 203
BssMI GATC 1 cut(s) 79
Bst4CI ACNGT 1 cut(s) 74
BstFNI CGCG 1 cut(s) 209
BstHHI GCGC 1 cut(s) 209
BstKTI GATC 1 cut(s) 82
BstMBI GATC 1 cut(s) 79
BstMWI GCNNNNNNNGC 2 cut(s) 56, 126
BstSFI CTRYAG 1 cut(s) 60
BstUI CGCG 1 cut(s) 209
BstV1I GCAGC 2 cut(s) 46, 68
BstV2I GAAGAC 1 cut(s) 183
BsuRI GGCC 1 cut(s) 5
BveI ACCTGC 1 cut(s) 203
CfoI GCGC 1 cut(s) 209
Csp6I GTAC 1 cut(s) 10
CviAII CATG 1 cut(s) 188
CviJI RGCY 5 cut(s) 5, 38, 59, 120, 172
CviKI_1 RGCY 5 cut(s) 5, 38, 59, 120, 172
CviQI GTAC 1 cut(s) 10
DpnI GATC 1 cut(s) 81
DpnII GATC 1 cut(s) 79
DraI TTTAAA 1 cut(s) 154
EaeI YGGCCR 1 cut(s) 3
FaeI CATG 1 cut(s) 191
FaiI YATR 2 cut(s) 123, 189
FaqI GGGAC 1 cut(s) 124
FatI CATG 1 cut(s) 187
FbaI TGATCA 1 cut(s) 79
Fnu4HI GCNGC 3 cut(s) 57, 60, 210
Fsp4HI GCNGC 3 cut(s) 57, 60, 210
FspBI CTAG 2 cut(s) 173, 226
GlaI GCGC 1 cut(s) 208
GluI GCNGC 3 cut(s) 57, 60, 210
HaeIII GGCC 1 cut(s) 5
HhaI GCGC 1 cut(s) 209
Hin1II CATG 1 cut(s) 191
Hin6I GCGC 1 cut(s) 207
HinP1I GCGC 1 cut(s) 207
HinfI GANTC 1 cut(s) 66
Hpy188III TCNNGA 1 cut(s) 77
HpyAV CCTTC 1 cut(s) 24
HpyCH4III ACNGT 1 cut(s) 74
HpyCH4V TGCA 3 cut(s) 56, 62, 96
HpyF10VI GCNNNNNNNGC 2 cut(s) 56, 126
Hsp92II CATG 1 cut(s) 191
HspAI GCGC 1 cut(s) 207
Ksp22I TGATCA 1 cut(s) 79
Kzo9I GATC 1 cut(s) 79
LpnPI CCDG 2 cut(s) 48, 198
Lsp1109I GCAGC 2 cut(s) 46, 68
MaeI CTAG 2 cut(s) 173, 226
MalI GATC 1 cut(s) 81
MboI GATC 1 cut(s) 79
MboII GAAGA 2 cut(s) 173, 188
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 1 cut(s) 149
MluNI TGGCCA 1 cut(s) 5
MnlI CCTC 3 cut(s) 33, 162, 184
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 153
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 59
MvnI CGCG 1 cut(s) 209
MwoI GCNNNNNNNGC 2 cut(s) 56, 126
NdeII GATC 1 cut(s) 79
NlaIII CATG 1 cut(s) 191
NlaIV GGNNCC 1 cut(s) 217
PfeI GAWTC 1 cut(s) 66
PflMI CCANNNNNTGG 1 cut(s) 193
PkrI GCNGC 3 cut(s) 58, 61, 211
PspN4I GGNNCC 1 cut(s) 217
PstI CTGCAG 1 cut(s) 64
PvuII CAGCTG 1 cut(s) 59
RsaI GTAC 1 cut(s) 11
RsaNI GTAC 1 cut(s) 10
SaqAI TTAA 1 cut(s) 153
SatI GCNGC 3 cut(s) 57, 60, 210
Sau3AI GATC 1 cut(s) 79
SetI ASST 3 cut(s) 61, 195, 217
SfcI CTRYAG 1 cut(s) 60
Sse9I AATT 1 cut(s) 149
SsiI CCGC 1 cut(s) 209
SspMI CTAG 2 cut(s) 173, 226
TaaI ACNGT 1 cut(s) 74
TaqI TCGA 1 cut(s) 201
TasI AATT 1 cut(s) 149
TauI GCSGC 1 cut(s) 212
TfiI GAWTC 1 cut(s) 66
Tru1I TTAA 1 cut(s) 153
Tru9I TTAA 1 cut(s) 153
TseI GCWGC 2 cut(s) 56, 59
Van91I CCANNNNNTGG 1 cut(s) 193
XapI RAATTY 1 cut(s) 149
XspI CTAG 2 cut(s) 173, 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.