MD14G1034600.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase At2g19130

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
3083625 .. 3083819
195 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1034600.v1.1.491

Sequence Viewer

Length: 195 bp
ATGCCAAATGGTTCTCTGCAATATCTTCTACTTGGAAAGAACCCGACAATTTTAGATTGGAAGGCTAGATATCACATTGCAGTAGGGACTGCCAGAGGATTGGCTTACCTCCATAAAGAGTGCAGAGACTGCATAATACACTGCGATATTAAGCCGGAGAACATCTTGTTGGATTCAGAATACTGTTTGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

65

Amino Acids

7.32

Weight (kDa)

6.24

Isoelectric Point (pI)

57.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 1 - 59 1.6e-09 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AjuI GAANNNNNNNTTGG 2 cut(s) 152, 184
Alw26I GTCTC 1 cut(s) 120
AlwNI CAGNNNCTG 1 cut(s) 129
BcoDI GTCTC 1 cut(s) 120
BfaI CTAG 1 cut(s) 66
Bse3DI GCAATG 1 cut(s) 75
BseMI GCAATG 1 cut(s) 75
BsgI GTGCAG 1 cut(s) 142
BsiSI CCGG 1 cut(s) 155
BslFI GGGAC 1 cut(s) 100
BsmAI GTCTC 1 cut(s) 120
BsmFI GGGAC 1 cut(s) 100
BsrDI GCAATG 1 cut(s) 75
Bst4CI ACNGT 1 cut(s) 185
BstAPI GCANNNNNTGC 1 cut(s) 129
BstMAI GTCTC 1 cut(s) 120
BstMWI GCNNNNNNNGC 1 cut(s) 129
BstXI CCANNNNNNTGG 1 cut(s) 100
BtsI GCAGTG 1 cut(s) 139
BtsIMutI CAGTG 1 cut(s) 139
CaiI CAGNNNCTG 1 cut(s) 129
CviJI RGCY 3 cut(s) 65, 104, 154
CviKI_1 RGCY 3 cut(s) 65, 104, 154
Eco32I GATATC 1 cut(s) 71
EcoRV GATATC 1 cut(s) 71
FaiI YATR 2 cut(s) 114, 134
FaqI GGGAC 1 cut(s) 100
FspBI CTAG 1 cut(s) 66
HapII CCGG 1 cut(s) 155
HinfI GANTC 1 cut(s) 173
HpaII CCGG 1 cut(s) 155
Hpy188I TCNGA 1 cut(s) 178
HpyAV CCTTC 1 cut(s) 55
HpyCH4III ACNGT 1 cut(s) 185
HpyCH4V TGCA 4 cut(s) 19, 80, 123, 132
HpyF10VI GCNNNNNNNGC 1 cut(s) 129
LpnPI CCDG 2 cut(s) 106, 168
MaeI CTAG 1 cut(s) 66
MboII GAAGA 1 cut(s) 17
MluCI AATT 1 cut(s) 48
MmeI TCCRAC 1 cut(s) 150
MnlI CCTC 2 cut(s) 89, 119
MseI TTAA 2 cut(s) 150, 193
MspI CCGG 1 cut(s) 155
MwoI GCNNNNNNNGC 1 cut(s) 129
PfeI GAWTC 1 cut(s) 173
PstNI CAGNNNCTG 1 cut(s) 129
SaqAI TTAA 2 cut(s) 150, 193
SetI ASST 1 cut(s) 111
SgeI CNNG 6 cut(s) 44, 55, 78, 105, 167, 178
Sse9I AATT 1 cut(s) 48
SspMI CTAG 1 cut(s) 66
TaaI ACNGT 1 cut(s) 185
TasI AATT 1 cut(s) 48
TfiI GAWTC 1 cut(s) 173
Tru1I TTAA 2 cut(s) 150, 193
Tru9I TTAA 2 cut(s) 150, 193
TscAI CASTG 1 cut(s) 146
TspRI CASTG 1 cut(s) 146
XspI CTAG 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.