Rmu_ssc0000093.1_g000017

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000093.1
Physical Location & Seq
Reverse (-)
88798 .. 89151
354 bp
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UTR
Exon/CDS
Intron
Rmu_ssc0000093.1_g000017.1.cds

Sequence Viewer

Length: 354 bp
atggaaacagacgaggattctttgctgctattcaagtacaaagatttgagaagagcaacacacaacttctcacaaaaaattggggaaggagcttttggttccgttttcaagggcatgttgtctaattcaacaaccatagcagtgaaagagcttaaaagtctggagcagggagacaagcaatttcatgcagaagtcagaactattggtgcaatccaacacatcaatcttgttcgcttgagggggttttgtgcagaatcttcaaaaagacttttagtttatgactacatgccaaatggttctctacaatctattttagttgataagaaatcactcatactagattggaaagcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

117

Amino Acids

13.24

Weight (kDa)

9.07

Isoelectric Point (pI)

43.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 38
AgsI TTSAA 4 cut(s) 34, 109, 129, 261
AjuI GAANNNNNNNTTGG 2 cut(s) 78, 110
AluBI AGCT 2 cut(s) 92, 151
AluI AGCT 2 cut(s) 92, 151
Alw26I GTCTC 1 cut(s) 165
ApeKI GCWGC 1 cut(s) 25
BbvI GCAGC 1 cut(s) 12
BcoDI GTCTC 1 cut(s) 165
BfaI CTAG 1 cut(s) 338
BisI GCNGC 1 cut(s) 26
BlsI GCNGC 1 cut(s) 27
BmiI GGNNCC 1 cut(s) 100
BpmI CTGGAG 1 cut(s) 182
BpuEI CTTGAG 1 cut(s) 256
BseXI GCAGC 1 cut(s) 12
BsgI GTGCAG 1 cut(s) 270
BsmAI GTCTC 1 cut(s) 165
BspLI GGNNCC 1 cut(s) 100
BspQI GCTCTTC 1 cut(s) 46
Bst6I CTCTTC 1 cut(s) 46
BstMAI GTCTC 1 cut(s) 165
BstNSI RCATGY 2 cut(s) 118, 289
BstV1I GCAGC 1 cut(s) 12
BtsI GCAGTG 1 cut(s) 147
BtsIMutI CAGTG 1 cut(s) 147
Csp6I GTAC 1 cut(s) 37
CviAII CATG 3 cut(s) 115, 185, 286
CviJI RGCY 3 cut(s) 92, 151, 350
CviKI_1 RGCY 3 cut(s) 92, 151, 350
CviQI GTAC 1 cut(s) 37
Eam1104I CTCTTC 1 cut(s) 46
EarI CTCTTC 1 cut(s) 46
FaeI CATG 3 cut(s) 118, 188, 289
FaiI YATR 6 cut(s) 116, 137, 186, 279, 287, 335
FatI CATG 3 cut(s) 114, 184, 285
Fnu4HI GCNGC 1 cut(s) 26
Fsp4HI GCNGC 1 cut(s) 26
FspBI CTAG 1 cut(s) 338
GluI GCNGC 1 cut(s) 26
GsuI CTGGAG 1 cut(s) 182
Hin1II CATG 3 cut(s) 118, 188, 289
HinfI GANTC 2 cut(s) 17, 254
Hpy188I TCNGA 1 cut(s) 197
Hpy188III TCNNGA 1 cut(s) 161
HpyAV CCTTC 1 cut(s) 80
HpyCH4V TGCA 3 cut(s) 188, 209, 251
Hsp92II CATG 3 cut(s) 118, 188, 289
LguI GCTCTTC 1 cut(s) 46
LmnI GCTCC 2 cut(s) 89, 163
LpnPI CCDG 2 cut(s) 146, 152
Lsp1109I GCAGC 1 cut(s) 12
MaeI CTAG 1 cut(s) 338
MboII GAAGA 2 cut(s) 63, 249
MluCI AATT 3 cut(s) 78, 124, 179
MmeI TCCRAC 1 cut(s) 238
MnlI CCTC 2 cut(s) 7, 231
MseI TTAA 1 cut(s) 153
MslI CAYNNNNRTG 1 cut(s) 140
NlaIII CATG 3 cut(s) 118, 188, 289
NlaIV GGNNCC 1 cut(s) 100
NspI RCATGY 2 cut(s) 118, 289
PciSI GCTCTTC 1 cut(s) 46
PfeI GAWTC 2 cut(s) 17, 254
PkrI GCNGC 1 cut(s) 27
PspN4I GGNNCC 1 cut(s) 100
RsaI GTAC 1 cut(s) 38
RsaNI GTAC 1 cut(s) 37
RseI CAYNNNNRTG 1 cut(s) 140
SapI GCTCTTC 1 cut(s) 46
SaqAI TTAA 1 cut(s) 153
SatI GCNGC 1 cut(s) 26
SetI ASST 2 cut(s) 94, 153
SmiMI CAYNNNNRTG 1 cut(s) 140
SmlI CTYRAG 1 cut(s) 235
SmoI CTYRAG 1 cut(s) 235
Sse9I AATT 3 cut(s) 78, 124, 179
SspMI CTAG 1 cut(s) 338
TasI AATT 3 cut(s) 78, 124, 179
TatI WGTACW 1 cut(s) 36
TfiI GAWTC 2 cut(s) 17, 254
Tru1I TTAA 1 cut(s) 153
Tru9I TTAA 1 cut(s) 153
TscAI CASTG 1 cut(s) 147
TseI GCWGC 1 cut(s) 25
TspDTI ATGAA 1 cut(s) 173
TspGWI ACGGA 1 cut(s) 91
TspRI CASTG 1 cut(s) 147
XceI RCATGY 2 cut(s) 118, 289
XspI CTAG 1 cut(s) 338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.