MD14G1034700.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase At2g19130

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0000916
Physical Location & Seq
Reverse (-)
3083881 .. 3084360
480 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1034700.v1.1.491

Sequence Viewer

Length: 480 bp
ATGCACTGCCTTTTTTATATTTCTTTTGATATTGGTCGATGTTACACGTGGATAGGGGATGTATATAATATACGGGGAACATCCGAATCTAGCTATAATCCGGACGGCATAGAATTGAAAATACCGCTTGTGTATCCTACAAGTGAGACGAAGAGAAAGACTACTTGGATTGTACTTGGAGTACTTGCAGGGTTCTTTTCCATCTTAAGTGATGCCACTCTCATGGTAGTTTTTAGAAGGAGATGGTCAGCGGCAGTGTTAGTGACTACCGATGATTCTTTGGTGCTATACAAGCATAGAGATTTAAGAAGAGCAACAAAGAACTTCTCCCAAAAACTCGGGGAAGGAGCCTTTGGTTCTGTATTTAAGGGGATGCTGCCTAACTCAACAACCATAGCAGTGAAACAGCTGAAATTTATGGACCAGGGAGAGAAACAATTTCGTACTGAAGTGGGAACTATCGGTAATCCAACACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

160

Amino Acids

17.97

Weight (kDa)

9.45

Isoelectric Point (pI)

39.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 100
AciI CCGC 2 cut(s) 125, 251
AcsI RAATTY 1 cut(s) 413
AcuI CTGAAG 1 cut(s) 468
AcvI CACGTG 1 cut(s) 48
AfaI GTAC 3 cut(s) 174, 183, 445
AflII CTTAAG 1 cut(s) 205
AflIII ACRYGT 1 cut(s) 45
AgsI TTSAA 1 cut(s) 118
AjnI CCWGG 1 cut(s) 423
AjuI GAANNNNNNNTTGG 4 cut(s) 148, 180, 336, 368
AluBI AGCT 2 cut(s) 93, 409
AluI AGCT 2 cut(s) 93, 409
Alw26I GTCTC 1 cut(s) 140
Ama87I CYCGRG 1 cut(s) 338
Aor13HI TCCGGA 1 cut(s) 100
ApeKI GCWGC 1 cut(s) 376
ApoI RAATTY 1 cut(s) 413
AspS9I GGNCC 1 cut(s) 421
AvaI CYCGRG 1 cut(s) 338
AvaII GGWCC 1 cut(s) 421
BbrPI CACGTG 1 cut(s) 48
BbvI GCAGC 1 cut(s) 363
BccI CCATC 2 cut(s) 209, 237
BceAI ACGGC 1 cut(s) 121
BciT130I CCWGG 1 cut(s) 425
BciVI GTATCC 1 cut(s) 144
BcoDI GTCTC 1 cut(s) 140
BfaI CTAG 1 cut(s) 90
BfrI CTTAAG 1 cut(s) 205
BfuI GTATCC 1 cut(s) 144
BisI GCNGC 2 cut(s) 252, 377
BlsI GCNGC 2 cut(s) 253, 378
BmcAI AGTACT 1 cut(s) 183
Bme1390I CCNGG 1 cut(s) 425
Bme18I GGWCC 1 cut(s) 421
BmeT110I CYCGRG 1 cut(s) 338
BmgT120I GGNCC 1 cut(s) 421
BmiI GGNNCC 1 cut(s) 349
BmrFI CCNGG 1 cut(s) 425
BmsI GCATC 2 cut(s) 202, 363
BsaAI YACGTR 1 cut(s) 48
BsaJI CCNNGG 1 cut(s) 424
BsaWI WCCGGW 1 cut(s) 100
BseAI TCCGGA 1 cut(s) 100
BseBI CCWGG 1 cut(s) 425
BseDI CCNNGG 1 cut(s) 424
BseGI GGATG 3 cut(s) 64, 80, 378
BseXI GCAGC 1 cut(s) 363
BsiHKCI CYCGRG 1 cut(s) 338
BsiSI CCGG 1 cut(s) 101
BsmAI GTCTC 1 cut(s) 140
BsmBI CGTCTC 1 cut(s) 140
BsoBI CYCGRG 1 cut(s) 338
Bsp13I TCCGGA 1 cut(s) 100
BspACI CCGC 2 cut(s) 125, 251
BspEI TCCGGA 1 cut(s) 100
BspLI GGNNCC 1 cut(s) 349
BspQI GCTCTTC 1 cut(s) 304
BspTI CTTAAG 1 cut(s) 205
BssECI CCNNGG 1 cut(s) 424
Bst2UI CCWGG 1 cut(s) 425
Bst6I CTCTTC 2 cut(s) 146, 304
BstAFI CTTAAG 1 cut(s) 205
BstBAI YACGTR 1 cut(s) 48
BstF5I GGATG 3 cut(s) 64, 80, 378
BstMAI GTCTC 1 cut(s) 140
BstMWI GCNNNNNNNGC 1 cut(s) 292
BstNI CCWGG 1 cut(s) 425
BstSCI CCNGG 1 cut(s) 423
BstV1I GCAGC 1 cut(s) 363
BstXI CCANNNNNNTGG 1 cut(s) 223
BsuI GTATCC 1 cut(s) 144
BtsCI GGATG 3 cut(s) 64, 80, 378
BtsI GCAGTG 3 cut(s) 4, 261, 405
BtsIMutI CAGTG 3 cut(s) 4, 261, 405
Cfr13I GGNCC 1 cut(s) 421
Csp6I GTAC 3 cut(s) 173, 182, 444
CviAII CATG 1 cut(s) 223
CviJI RGCY 3 cut(s) 93, 350, 409
CviKI_1 RGCY 3 cut(s) 93, 350, 409
CviQI GTAC 3 cut(s) 173, 182, 444
Eam1104I CTCTTC 2 cut(s) 146, 304
EarI CTCTTC 2 cut(s) 146, 304
Eco47I GGWCC 1 cut(s) 421
Eco57I CTGAAG 1 cut(s) 468
Eco72I CACGTG 1 cut(s) 48
Eco88I CYCGRG 1 cut(s) 338
EcoRII CCWGG 1 cut(s) 423
Esp3I CGTCTC 1 cut(s) 140
FaeI CATG 1 cut(s) 226
FatI CATG 1 cut(s) 222
Fnu4HI GCNGC 2 cut(s) 252, 377
FokI GGATG 3 cut(s) 67, 71, 385
Fsp4HI GCNGC 2 cut(s) 252, 377
FspBI CTAG 1 cut(s) 90
GluI GCNGC 2 cut(s) 252, 377
HapII CCGG 1 cut(s) 101
Hin1II CATG 1 cut(s) 226
HinfI GANTC 2 cut(s) 86, 275
HpaII CCGG 1 cut(s) 101
Hpy188I TCNGA 1 cut(s) 85
Hpy188III TCNNGA 1 cut(s) 101
HpyAV CCTTC 2 cut(s) 231, 338
HpyCH4IV ACGT 1 cut(s) 47
HpyCH4V TGCA 2 cut(s) 4, 188
HpyF10VI GCNNNNNNNGC 1 cut(s) 292
HpySE526I ACGT 1 cut(s) 47
Hsp92II CATG 1 cut(s) 226
Kpn2I TCCGGA 1 cut(s) 100
LguI GCTCTTC 1 cut(s) 304
LmnI GCTCC 1 cut(s) 347
LpnPI CCDG 4 cut(s) 114, 174, 410, 437
Lsp1109I GCAGC 1 cut(s) 363
LweI GCATC 2 cut(s) 202, 363
MaeI CTAG 1 cut(s) 90
MaeII ACGT 1 cut(s) 47
MaeIII GTNAC 2 cut(s) 41, 262
MboII GAAGA 2 cut(s) 163, 321
MluCI AATT 3 cut(s) 113, 413, 437
MroI TCCGGA 1 cut(s) 100
MseI TTAA 3 cut(s) 206, 305, 366
MslI CAYNNNNRTG 2 cut(s) 221, 398
MspA1I CMGCKG 2 cut(s) 251, 409
MspCI CTTAAG 1 cut(s) 205
MspI CCGG 1 cut(s) 101
MspR9I CCNGG 1 cut(s) 425
MvaI CCWGG 1 cut(s) 425
MwoI GCNNNNNNNGC 1 cut(s) 292
NlaIII CATG 1 cut(s) 226
NlaIV GGNNCC 1 cut(s) 349
NmuCI GTSAC 1 cut(s) 262
PciSI GCTCTTC 1 cut(s) 304
PfeI GAWTC 2 cut(s) 86, 275
PkrI GCNGC 2 cut(s) 253, 378
PmaCI CACGTG 1 cut(s) 48
PmlI CACGTG 1 cut(s) 48
Ppu21I YACGTR 1 cut(s) 48
Psp6I CCWGG 1 cut(s) 423
PspCI CACGTG 1 cut(s) 48
PspGI CCWGG 1 cut(s) 423
PspN4I GGNNCC 1 cut(s) 349
PspPI GGNCC 1 cut(s) 421
PvuII CAGCTG 1 cut(s) 409
RsaI GTAC 3 cut(s) 174, 183, 445
RsaNI GTAC 3 cut(s) 173, 182, 444
RseI CAYNNNNRTG 2 cut(s) 221, 398
SapI GCTCTTC 1 cut(s) 304
SaqAI TTAA 3 cut(s) 206, 305, 366
SatI GCNGC 2 cut(s) 252, 377
Sau96I GGNCC 1 cut(s) 421
ScaI AGTACT 1 cut(s) 183
ScrFI CCNGG 1 cut(s) 425
SetI ASST 3 cut(s) 50, 95, 411
SfaNI GCATC 2 cut(s) 202, 363
SinI GGWCC 1 cut(s) 421
SmiMI CAYNNNNRTG 2 cut(s) 221, 398
SmlI CTYRAG 1 cut(s) 205
SmoI CTYRAG 1 cut(s) 205
Sse9I AATT 3 cut(s) 113, 413, 437
SsiI CCGC 2 cut(s) 125, 251
SspMI CTAG 1 cut(s) 90
StyD4I CCNGG 1 cut(s) 423
TaiI ACGT 1 cut(s) 50
TaqI TCGA 1 cut(s) 37
TasI AATT 3 cut(s) 113, 413, 437
TatI WGTACW 2 cut(s) 172, 181
TauI GCSGC 1 cut(s) 254
TfiI GAWTC 2 cut(s) 86, 275
Tru1I TTAA 3 cut(s) 206, 305, 366
Tru9I TTAA 3 cut(s) 206, 305, 366
TscAI CASTG 2 cut(s) 261, 405
TseFI GTSAC 1 cut(s) 262
TseI GCWGC 1 cut(s) 376
Tsp45I GTSAC 1 cut(s) 262
TspRI CASTG 2 cut(s) 261, 405
Vha464I CTTAAG 1 cut(s) 205
VpaK11BI GGWCC 1 cut(s) 421
XapI RAATTY 1 cut(s) 413
XspI CTAG 1 cut(s) 90
ZrmI AGTACT 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.