Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000916

Physical Location & Seq

Genomic Coordinates Reverse (-)

42852819 .. 42855639

Gene Structure 2821 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ49982

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGATTCATTTTGGTTCGGAGTGTGTGCTTGTTGTGTTATGTTGTTTCATCATCATCAGCTTCGGAGCTCATCTCTCAACGGCGTCTGACAAGCTCATCCCAGGCCGGTCACTTTCCGGCAACCAGACATTAACCTCTCCGGCAGGCAAATTTGAACTGGGTTTCTTCACTCGAGGTAACTCTAACAATTACTACATAGGCATTTGGTACGCAAATCTGCCCGATCATACAGTTGTCTGGGTGGCTAATAGAAACCACCCTGTTTCTGATCCAGTTTCTTCAGAGTTTAGATTCCTTGAAAATGGAAACTTTACCTTGCTGGACCAGTCCAAATCTTCAATTTGGTCAACCCAGAATTCTATGTCTTCAGTGTCCAAATCCGCCACATATACAGCAAGGCTTCTTGACAATGGCAACTTTGTTATTCAAGATGCATCTGGTGTAATATGGCAGAGTTTTGATCACCCAACTGATACTTGGCTCCCAGGTGGTGCCAGGCTTGGTTACAACAAGCTTACCAATCAGAAACTAGCTCTCACTCCCTGGAAAAACCCACAAGACCCAGCCCCTGGAATTTTTTCCCTTGAGATTGAACCAAATGGGACAAGTTTTTGGTTGCTCTATAATGGCTCTCAACAGTATTGGAACAGTGGGCCTTGGAATGGCAAATCTTTTGCCCAAGTCCCTGAAATAGAGCGGAACGATCATATAACAAATGTTACTTTTGTTCCAGATGACAAGGGGAGCTATTTTTCTTATGATTCTGCGGACCCTGACACTTATATTAGGTACATGATTGACTTCACTGGGCAGTTCAAGGTCTATATGTGGGGGAAGGGCTTCACCCAGTGGAATTCATTTTGGTTGAGGCCAACCCAATTCTGTGAGGTTTATGGATTTTGTGGTGCTTCTAGCATCTGCCAGCAAAACGCTAGTCTGTGTGTTTGTATGGAGGGATATGAACCTAAAGTCCCAAAAGAGTGGGGATTAGGGGATCACACAGATGGGTGTGTCAGGAAAGCACCTTTAAAATGCATTGCTGGAGTAGATGATACTTTTAAGGTGGTATCTGATGTCCGCCTTCCTGTGAATCCAGAGACTTTAGCAGTTGATAACAGTGATGATTGCAGATTAGCGTGCTTAAGAAATTGCTCATGTACAGCTTTTGCTTATGATAATAGGTGTCTTGTTTGGGGAGGGGATCTATTCAACGTCAAACAATTTACACCAGACGAGAAGGAAGGCAAGGACTTGCATCTGAAAATTTCAGCTTCTGAGAGAATAGAGGGGAAGAAAGAGAACAGGACTCTTTGGATCATCATCGGAGTACTTGGAGGTTTATTTATTGTTATTACCATTGTTGTGGTACTATTTGTGAAGCATCGATGTTTTGGGGAAAAGTTAGATACACTTGATGGTTCCTTGGTGATGTTCAGGTGTAGGGCTTTAAGAAAGGCAACAAACAACTTTTCGGAGAAACTTGGGGAAGGAGGCTTTGGTTCTGTTTTCAAAGGGACATTGCAGGGATCAATTGCCATTGCGGTGAAGAGACTCAACTGTCCCAAGCAAGAGGATAAGCAATTCCTTACAGAAATTGGAAAGCTAGAATATGTCCCAAAAGTAGCAGATTTTGGTCTAGCAAAGCTCATAGACAGAGACATTAGCCGGATAATAACAACCATGAAAGGAACCAGAGGCTATATTGCTCCAGAGTGGATTTCAGGAGAAGCTATAACATCGAAAGCTGATACCTTTAGCTATGGAATGCTGTTATTTGAACTGATCTCGGGAAGGAGAAACAGAGATGTATTAGATGATGCTTTAGAAAATTACTTCCCAACCCGTGTTGCCAATGTGTTGAATAAAGAAGAAGATGTTGATGCCTTGTTGGATTACAGGTTAGAAGGTAATGCTGACAAAGACCAACTGAGTAGAGCATGCAAAGTCGCTTGTTGGTGCATTCAAGACGACGAGAAGGGTAGGCCAACTATGGGGCAGGTTGTTCAACTTCTGGAGGGAGTTATAGATGCTGGAATTCCACCAATGCCAAAGTTCCTTGACCGCTTTTCTAAGAGTCTAGTTGCATCCATCAATTATCGGTACATCACTTCCAGCAGTTCTGATTCATGTCGTCATGATATACTATCTGAGTACTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

719

Amino Acids

80.42

Weight (kDa)

5.82

Isoelectric Point (pI)

29.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	77 - 183	2.9e-29	D-mannose binding lectin
S_locus_glycop	PF00954	215 - 323	3.7e-22	S-locus glycoprotein domain
PAN_2	PF08276	348 - 405	1.6e-13	PAN-like domain
Pkinase	PF00069	539 - 669	1.2e-15	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	539 - 670	4.5e-10	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000916)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g26420 FvH4_6g26420 FvH4_6g26450 FvH4_6g26451
malus_domestica	MD09G1116700.v1.1 MD09G1233200.v1.1 MD12G1033500.v1.1 MD14G1034400.v1.1 MD14G1034600.v1.1 MD14G1034700.v1.1 MD14G1034800.v1.1 MD14G1034900.v1.1 MD14G1035200.v1.1 MD17G1090300.v1.1 MD17G1108200.v1.1 MD17G1237700.v1.1 MD17G1237800.v1.1 MD17G1238000.v1.1 MD17G1238400.v1.1
prunus_persica	Prupe.3G131100_v2.0.a1 Prupe.3G141400_v2.0.a1
pyrus_communis	pycom09g04120 pycom12g03080 pycom14g03020 pycom14g03080 pycom14g03090 pycom17g24250
rosa_chinensis	RchiOBHm_Chr2g0127791 RchiOBHm_Chr2g0127811 RchiOBHm_Chr2g0127821 RchiOBHm_Chr2g0128001
rosa_laevigata	RLG00000002113 RLG00000018931 RLG00000018932 RLG00000018933 RLG00000018934 RLG00000023426
rosa_multiflora	Rmu_sc0000516.1_g000026 Rmu_sc0000516.1_g000045 Rmu_ssc0000093.1_g000010 Rmu_ssc0000093.1_g000016 Rmu_ssc0000093.1_g000017 Rmu_ssc0000093.1_g000024
rosa_roxburghii	Rroxscaffold_2G00116790 Rroxscaffold_2G00116800 Rroxscaffold_2G00116810 Rroxscaffold_2G00116840
rosa_rugosa	Rorug02G0270500 Rorug02G0270600 Rorug02G0270800 Rorug02G0270900 Rorug02G0271000
rosa_samantha	Rh2AG323100 Rh2BG332100 Rh2BG332200 Rh2BG332300 Rh2CG310900 Rh2CG311000 Rh2DG350400 Rh2DG350500 Rh2DG350600 Rh2DG350700
rosa_wichuraiana	Rw2G026190 Rw2G026210 Rw2G026230

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1557
Acc36I	ACCTGC	1 cut(s)	1987
AccB1I	GGYRCC	1 cut(s)	491
AccB7I	CCANNNNNTGG	1 cut(s)	569
AccBSI	CCGCTC	1 cut(s)	697
AciI	CCGC	6 cut(s)	381, 697, 767, 1078, 1541, 2062
AclWI	GGATC	5 cut(s)	263, 1002, 1209, 1322, 1534
AcsI	RAATTY	6 cut(s)	149, 355, 573, 853, 1263, 2034
AcuI	CTGAAG	2 cut(s)	264, 351
AcyI	GRCGYC	1 cut(s)	83
AdeI	CACNNNGTG	1 cut(s)	849
AfaI	GTAC	7 cut(s)	209, 791, 1159, 1329, 1368, 2102, 2153
AfiI	CCNNNNNNNGG	3 cut(s)	569, 662, 1991
AflII	CTTAAG	1 cut(s)	1141
AjnI	CCWGG	5 cut(s)	100, 484, 494, 542, 568
AjuI	GAANNNNNNNTTGG	2 cut(s)	1479, 1511
AloI	GAACNNNNNNTCC	2 cut(s)	954, 986
Alw21I	GWGCWC	1 cut(s)	70
Alw26I	GTCTC	3 cut(s)	1091, 1543, 1650
AlwI	GGATC	5 cut(s)	263, 1002, 1209, 1322, 1534
AlwNI	CAGNNNCTG	2 cut(s)	569, 1274
Ama87I	CYCGRG	2 cut(s)	171, 1786
AoxI	GGCC	4 cut(s)	103, 653, 869, 1982
ApoI	RAATTY	6 cut(s)	149, 355, 573, 853, 1263, 2034
ArsI	GACNNNNNNTTYG	2 cut(s)	919, 951
Asp700I	GAANNNNTTC	2 cut(s)	577, 839
AspS9I	GGNCC	3 cut(s)	322, 653, 769
AsuHPI	GGTGA	4 cut(s)	455, 835, 1438, 1555
AvaI	CYCGRG	2 cut(s)	171, 1786
AvaII	GGWCC	2 cut(s)	322, 769
BanI	GGYRCC	1 cut(s)	491
BanII	GRGCYC	1 cut(s)	70
BbsI	GAAGAC	1 cut(s)	357
Bbv12I	GWGCWC	1 cut(s)	70
BccI	CCATC	3 cut(s)	998, 1409, 2096
BceAI	ACGGC	1 cut(s)	96
BciT130I	CCWGG	5 cut(s)	102, 486, 496, 544, 570
BclI	TGATCA	1 cut(s)	460
BcoDI	GTCTC	3 cut(s)	1091, 1543, 1650
BfaI	CTAG	6 cut(s)	530, 912, 933, 1604, 1637, 2078
BfrI	CTTAAG	1 cut(s)	1141
BfuAI	ACCTGC	1 cut(s)	1987
BmcAI	AGTACT	2 cut(s)	1329, 2153
Bme1390I	CCNGG	5 cut(s)	102, 486, 496, 544, 570
Bme18I	GGWCC	2 cut(s)	322, 769
BmeT110I	CYCGRG	2 cut(s)	171, 1786
BmgT120I	GGNCC	3 cut(s)	322, 653, 769
BmiI	GGNNCC	5 cut(s)	482, 493, 771, 1420, 1690
BmrFI	CCNGG	5 cut(s)	102, 486, 496, 544, 570
BmrI	ACTGGG	3 cut(s)	167, 816, 841
BmsI	GCATC	9 cut(s)	421, 443, 924, 1264, 1390, 1807, 1870, 2017, 2093
BmuI	ACTGGG	3 cut(s)	167, 816, 841
BpiI	GAAGAC	1 cut(s)	357
BplI	GAGNNNNNCTC	2 cut(s)	57, 89
BpmI	CTGGAG	3 cut(s)	1062, 1692, 2033
BpuEI	CTTGAG	1 cut(s)	605
Bsa29I	ATCGAT	1 cut(s)	1384
BsaBI	GATNNNNATC	1 cut(s)	1319
BsaHI	GRCGYC	1 cut(s)	83
BsaJI	CCNNGG	6 cut(s)	100, 484, 542, 568, 656, 1422
Bsc4I	CCNNNNNNNGG	3 cut(s)	569, 662, 1991
Bse118I	RCCGGY	1 cut(s)	105
Bse1I	ACTGG	5 cut(s)	162, 272, 325, 811, 847
Bse3DI	GCAATG	3 cut(s)	1035, 1517, 1536
Bse8I	GATNNNNATC	1 cut(s)	1319
BseBI	CCWGG	5 cut(s)	102, 486, 496, 544, 570
BseCI	ATCGAT	1 cut(s)	1384
BseDI	CCNNGG	6 cut(s)	100, 484, 542, 568, 656, 1422
BseGI	GGATG	2 cut(s)	96, 2084
BseJI	GATNNNNATC	1 cut(s)	1319
BseLI	CCNNNNNNNGG	3 cut(s)	569, 662, 1991
BseMI	GCAATG	3 cut(s)	1035, 1517, 1536
BseMII	CTCAG	3 cut(s)	1266, 1919, 2139
BseNI	ACTGG	5 cut(s)	162, 272, 325, 811, 847
BseYI	CCCAGC	1 cut(s)	562
BshFI	GGCC	4 cut(s)	105, 655, 871, 1984
BshNI	GGYRCC	1 cut(s)	491
BshVI	ATCGAT	1 cut(s)	1384
BsiHKAI	GWGCWC	1 cut(s)	70
BsiHKCI	CYCGRG	2 cut(s)	171, 1786
BsiSI	CCGG	4 cut(s)	106, 117, 140, 1666
BslFI	GGGAC	6 cut(s)	616, 668, 956, 1528, 1545, 1598
BslI	CCNNNNNNNGG	3 cut(s)	569, 662, 1991
BsmAI	GTCTC	3 cut(s)	1091, 1543, 1650
BsmFI	GGGAC	6 cut(s)	616, 668, 956, 1528, 1545, 1598
BsmI	GAATGC	2 cut(s)	1770, 1959
BsnI	GGCC	4 cut(s)	105, 655, 871, 1984
BsoBI	CYCGRG	2 cut(s)	171, 1786
Bsp1286I	GDGCHC	1 cut(s)	70
Bsp1407I	TGTACA	1 cut(s)	1157
Bsp143I	GATC	9 cut(s)	223, 268, 460, 703, 994, 1201, 1314, 1526, 1782
BspACI	CCGC	6 cut(s)	381, 697, 767, 1078, 1541, 2062
BspANI	GGCC	4 cut(s)	105, 655, 871, 1984
BspCNI	CTCAG	3 cut(s)	1267, 1920, 2140
BspDI	ATCGAT	1 cut(s)	1384
BspHI	TCATGA	2 cut(s)	2134, 2156
BspLI	GGNNCC	5 cut(s)	482, 493, 771, 1420, 1690
BspMI	ACCTGC	1 cut(s)	1987
BspPI	GGATC	5 cut(s)	263, 1002, 1209, 1322, 1534
BspT107I	GGYRCC	1 cut(s)	491
BspTI	CTTAAG	1 cut(s)	1141
BsrBI	CCGCTC	1 cut(s)	697
BsrDI	GCAATG	3 cut(s)	1035, 1517, 1536
BsrFI	RCCGGY	1 cut(s)	105
BsrGI	TGTACA	1 cut(s)	1157
BsrI	ACTGG	5 cut(s)	162, 272, 325, 811, 847
BssAI	RCCGGY	1 cut(s)	105
BssECI	CCNNGG	6 cut(s)	100, 484, 542, 568, 656, 1422
BssMI	GATC	9 cut(s)	223, 268, 460, 703, 994, 1201, 1314, 1526, 1782
BssNI	GRCGYC	1 cut(s)	83
BssT1I	CCWWGG	2 cut(s)	656, 1422
Bst2UI	CCWGG	5 cut(s)	102, 486, 496, 544, 570
Bst4CI	ACNGT	5 cut(s)	232, 639, 650, 1118, 1559
Bst6I	CTCTTC	1 cut(s)	1541
BstACI	GRCGYC	1 cut(s)	83
BstAFI	CTTAAG	1 cut(s)	1141
BstAUI	TGTACA	1 cut(s)	1157
BstC8I	GCNNGC	4 cut(s)	145, 923, 1138, 1939
BstDEI	CTNAG	4 cut(s)	1275, 1928, 2070, 2148
BstF5I	GGATG	2 cut(s)	96, 2084
BstKTI	GATC	9 cut(s)	226, 271, 463, 706, 997, 1204, 1317, 1529, 1785
BstMAI	GTCTC	3 cut(s)	1091, 1543, 1650
BstMBI	GATC	9 cut(s)	223, 268, 460, 703, 994, 1201, 1314, 1526, 1782
BstNI	CCWGG	5 cut(s)	102, 486, 496, 544, 570
BstNSI	RCATGY	1 cut(s)	1941
BstSCI	CCNGG	5 cut(s)	100, 484, 494, 542, 568
BstV2I	GAAGAC	1 cut(s)	357
BstX2I	RGATCY	1 cut(s)	1201
BstXI	CCANNNNNNTGG	2 cut(s)	981, 1363
BstYI	RGATCY	1 cut(s)	1201
Bsu15I	ATCGAT	1 cut(s)	1384
BsuRI	GGCC	4 cut(s)	105, 655, 871, 1984
BsuTUI	ATCGAT	1 cut(s)	1384
BtsCI	GGATG	2 cut(s)	96, 2084
BtsIMutI	CAGTG	5 cut(s)	375, 655, 804, 854, 1123
BveI	ACCTGC	1 cut(s)	1987
Cac8I	GCNNGC	4 cut(s)	145, 923, 1138, 1939
CaiI	CAGNNNCTG	2 cut(s)	569, 1274
CciI	TCATGA	2 cut(s)	2134, 2156
Cfr10I	RCCGGY	1 cut(s)	105
Cfr13I	GGNCC	3 cut(s)	322, 653, 769
ClaI	ATCGAT	1 cut(s)	1384
CseI	GACGC	1 cut(s)	72
Csp6I	GTAC	7 cut(s)	208, 790, 1158, 1328, 1367, 2101, 2152
CviAII	CATG	7 cut(s)	793, 1155, 1681, 1938, 2127, 2135, 2157
CviQI	GTAC	7 cut(s)	208, 790, 1158, 1328, 1367, 2101, 2152
DdeI	CTNAG	4 cut(s)	1275, 1928, 2070, 2148
DpnI	GATC	9 cut(s)	225, 270, 462, 705, 996, 1203, 1316, 1528, 1784
DpnII	GATC	9 cut(s)	223, 268, 460, 703, 994, 1201, 1314, 1526, 1782
DraI	TTTAAA	1 cut(s)	1029
DraIII	CACNNNGTG	1 cut(s)	849
DrdI	GACNNNNNNGTC	1 cut(s)	1557
DseDI	GACNNNNNNGTC	1 cut(s)	1557
Eam1104I	CTCTTC	1 cut(s)	1541
EarI	CTCTTC	1 cut(s)	1541
EciI	GGCGGA	2 cut(s)	370, 1067
Ecl136II	GAGCTC	1 cut(s)	68
Eco130I	CCWWGG	2 cut(s)	656, 1422
Eco24I	GRGCYC	1 cut(s)	70
Eco47I	GGWCC	2 cut(s)	322, 769
Eco53kI	GAGCTC	1 cut(s)	68
Eco57I	CTGAAG	2 cut(s)	264, 351
Eco88I	CYCGRG	2 cut(s)	171, 1786
EcoICRI	GAGCTC	1 cut(s)	68
EcoRI	GAATTC	3 cut(s)	355, 853, 2034
EcoRII	CCWGG	5 cut(s)	100, 484, 494, 542, 568
EcoT14I	CCWWGG	2 cut(s)	656, 1422
EcoT22I	ATGCAT	2 cut(s)	436, 1037
EcoT38I	GRGCYC	1 cut(s)	70
ErhI	CCWWGG	2 cut(s)	656, 1422
FaeI	CATG	7 cut(s)	796, 1158, 1684, 1941, 2130, 2138, 2160
FaqI	GGGAC	6 cut(s)	616, 668, 956, 1528, 1545, 1598
FatI	CATG	7 cut(s)	792, 1154, 1680, 1937, 2126, 2134, 2156
FbaI	TGATCA	1 cut(s)	460
FokI	GGATG	2 cut(s)	83, 2071
FriOI	GRGCYC	1 cut(s)	70
FspBI	CTAG	6 cut(s)	530, 912, 933, 1604, 1637, 2078
GsaI	CCCAGC	1 cut(s)	566
GsuI	CTGGAG	3 cut(s)	1062, 1692, 2033
HaeIII	GGCC	4 cut(s)	105, 655, 871, 1984
HapII	CCGG	4 cut(s)	106, 117, 140, 1666
HgaI	GACGC	1 cut(s)	72
Hin1I	GRCGYC	1 cut(s)	83
Hin1II	CATG	7 cut(s)	796, 1158, 1684, 1941, 2130, 2138, 2160
HincII	GTYRAC	1 cut(s)	348
HindII	GTYRAC	1 cut(s)	348
HindIII	AAGCTT	1 cut(s)	512
HinfI	GANTC	8 cut(s)	4, 291, 761, 1090, 1306, 1551, 2074, 2123
HpaII	CCGG	4 cut(s)	106, 117, 140, 1666
HphI	GGTGA	4 cut(s)	455, 835, 1438, 1555
Hpy166II	GTNNAC	1 cut(s)	348
Hpy8I	GTNNAC	1 cut(s)	348
Hpy99I	CGWCG	1 cut(s)	1973
HpyAV	CCTTC	8 cut(s)	829, 1091, 1231, 1235, 1481, 1785, 1898, 1969
HpyCH4III	ACNGT	5 cut(s)	232, 639, 650, 1118, 1559
HpyCH4IV	ACGT	1 cut(s)	1212
HpyCH4V	TGCA	8 cut(s)	434, 1035, 1128, 1255, 1522, 1941, 1959, 2084
HpyF3I	CTNAG	4 cut(s)	1275, 1928, 2070, 2148
HpySE526I	ACGT	1 cut(s)	1212
Hsp92I	GRCGYC	1 cut(s)	83
Hsp92II	CATG	7 cut(s)	796, 1158, 1684, 1941, 2130, 2138, 2160
Ksp22I	TGATCA	1 cut(s)	460
Kzo9I	GATC	9 cut(s)	223, 268, 460, 703, 994, 1201, 1314, 1526, 1782
LmnI	GCTCC	4 cut(s)	65, 486, 744, 1711
LweI	GCATC	9 cut(s)	421, 443, 924, 1264, 1390, 1807, 1870, 2017, 2093
MaeI	CTAG	6 cut(s)	530, 912, 933, 1604, 1637, 2078
MaeII	ACGT	1 cut(s)	1212
MaeIII	GTNAC	4 cut(s)	108, 176, 503, 718
MalI	GATC	9 cut(s)	225, 270, 462, 705, 996, 1203, 1316, 1528, 1784
MbiI	CCGCTC	1 cut(s)	697
MboI	GATC	9 cut(s)	223, 268, 460, 703, 994, 1201, 1314, 1526, 1782
MboII	GAAGA	8 cut(s)	157, 270, 327, 357, 1303, 1558, 1880, 1883
MfeI	CAATTG	1 cut(s)	1530
MflI	RGATCY	1 cut(s)	1201
MhlI	GDGCHC	1 cut(s)	70
MlyI	GAGTC	3 cut(s)	1300, 1545, 2083
MmeI	TCCRAC	1 cut(s)	1869
Mph1103I	ATGCAT	2 cut(s)	436, 1037
MroXI	GAANNNNTTC	2 cut(s)	577, 839
MseI	TTAA	5 cut(s)	131, 1028, 1059, 1142, 1448
MslI	CAYNNNNRTG	3 cut(s)	1002, 1361, 1541
MspCI	CTTAAG	1 cut(s)	1141
MspI	CCGG	4 cut(s)	106, 117, 140, 1666
MspR9I	CCNGG	5 cut(s)	102, 486, 496, 544, 570
MunI	CAATTG	1 cut(s)	1530
Mva1269I	GAATGC	2 cut(s)	1770, 1959
MvaI	CCWGG	5 cut(s)	102, 486, 496, 544, 570
NdeII	GATC	9 cut(s)	223, 268, 460, 703, 994, 1201, 1314, 1526, 1782
NlaIII	CATG	7 cut(s)	796, 1158, 1684, 1941, 2130, 2138, 2160
NlaIV	GGNNCC	5 cut(s)	482, 493, 771, 1420, 1690
NmuCI	GTSAC	1 cut(s)	108
NsiI	ATGCAT	2 cut(s)	436, 1037
NspI	RCATGY	1 cut(s)	1941
PaeI	GCATGC	1 cut(s)	1941
PaeR7I	CTCGAG	1 cut(s)	171
PagI	TCATGA	2 cut(s)	2134, 2156
PctI	GAATGC	2 cut(s)	1770, 1959
PdmI	GAANNNNTTC	2 cut(s)	577, 839
PfeI	GAWTC	5 cut(s)	4, 291, 761, 1090, 2123
PflMI	CCANNNNNTGG	1 cut(s)	569
PleI	GAGTC	3 cut(s)	1300, 1545, 2082
PpsI	GAGTC	3 cut(s)	1300, 1545, 2082
Psp124BI	GAGCTC	1 cut(s)	70
Psp6I	CCWGG	5 cut(s)	100, 484, 494, 542, 568
PspFI	CCCAGC	1 cut(s)	562
PspGI	CCWGG	5 cut(s)	100, 484, 494, 542, 568
PspN4I	GGNNCC	5 cut(s)	482, 493, 771, 1420, 1690
PspPI	GGNCC	3 cut(s)	322, 653, 769
PspXI	VCTCGAGB	1 cut(s)	171
PstNI	CAGNNNCTG	2 cut(s)	569, 1274
PsuI	RGATCY	1 cut(s)	1201
RsaI	GTAC	7 cut(s)	209, 791, 1159, 1329, 1368, 2102, 2153
RsaNI	GTAC	7 cut(s)	208, 790, 1158, 1328, 1367, 2101, 2152
RseI	CAYNNNNRTG	3 cut(s)	1002, 1361, 1541
SacI	GAGCTC	1 cut(s)	70
SaqAI	TTAA	5 cut(s)	131, 1028, 1059, 1142, 1448
Sau3AI	GATC	9 cut(s)	223, 268, 460, 703, 994, 1201, 1314, 1526, 1782
Sau96I	GGNCC	3 cut(s)	322, 653, 769
ScaI	AGTACT	2 cut(s)	1329, 2153
SchI	GAGTC	3 cut(s)	1300, 1545, 2083
ScrFI	CCNGG	5 cut(s)	102, 486, 496, 544, 570
SduI	GDGCHC	1 cut(s)	70
SfaNI	GCATC	9 cut(s)	421, 443, 924, 1264, 1390, 1807, 1870, 2017, 2093
Sfr274I	CTCGAG	1 cut(s)	171
SinI	GGWCC	2 cut(s)	322, 769
SlaI	CTCGAG	1 cut(s)	171
SmiMI	CAYNNNNRTG	3 cut(s)	1002, 1361, 1541
SmlI	CTYRAG	3 cut(s)	171, 584, 1141
SmoI	CTYRAG	3 cut(s)	171, 584, 1141
SphI	GCATGC	1 cut(s)	1941
SsiI	CCGC	6 cut(s)	381, 697, 767, 1078, 1541, 2062
SspMI	CTAG	6 cut(s)	530, 912, 933, 1604, 1637, 2078
SstI	GAGCTC	1 cut(s)	70
StyD4I	CCNGG	5 cut(s)	100, 484, 494, 542, 568
StyI	CCWWGG	2 cut(s)	656, 1422
TaaI	ACNGT	5 cut(s)	232, 639, 650, 1118, 1559
TaiI	ACGT	1 cut(s)	1215
TaqI	TCGA	3 cut(s)	172, 1384, 1739
TatI	WGTACW	3 cut(s)	1157, 1327, 2151
TfiI	GAWTC	5 cut(s)	4, 291, 761, 1090, 2123
Tru1I	TTAA	5 cut(s)	131, 1028, 1059, 1142, 1448
Tru9I	TTAA	5 cut(s)	131, 1028, 1059, 1142, 1448
TscAI	CASTG	5 cut(s)	375, 655, 811, 854, 1123
TseFI	GTSAC	1 cut(s)	108
Tsp45I	GTSAC	1 cut(s)	108
TspDTI	ATGAA	5 cut(s)	37, 846, 975, 1697, 2115
TspRI	CASTG	5 cut(s)	375, 655, 811, 854, 1123
Van91I	CCANNNNNTGG	1 cut(s)	569
Vha464I	CTTAAG	1 cut(s)	1141
VpaK11BI	GGWCC	2 cut(s)	322, 769
XapI	RAATTY	6 cut(s)	149, 355, 573, 853, 1263, 2034
XceI	RCATGY	1 cut(s)	1941
XcmI	CCANNNNNNNNNTGG	1 cut(s)	474
XhoI	CTCGAG	1 cut(s)	171
XmnI	GAANNNNTTC	2 cut(s)	577, 839
XspI	CTAG	6 cut(s)	530, 912, 933, 1604, 1637, 2078
ZrmI	AGTACT	2 cut(s)	1329, 2153
Zsp2I	ATGCAT	2 cut(s)	436, 1037

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.