Rorug02G0270900

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000916
Physical Location & Seq
Reverse (-)
28704425 .. 28706564
2140 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0270900.1

Sequence Viewer

Length: 1035 bp
ATGTCCAACACGCGCCAGACAACGGCCCACCCGCTACGGGACAAGAAATTGTCTTGCACGCGCAAGACTGCTCGCGTTTCTCTCTCCACATTGAGGCCTGACGTCACCCACTTCTTCTGTTGGGCTGAGCTGGTGACTGGCTTGCCTGGAAGACATGCTTCACATTTGGCGGAGGCATTGACTTTTACGGAAGAGGCAGTGGTTGATTTTGGCGAGATTGGTGTGGCAGCTGTCACAGAGGAACACCATTACCTGGTTGGACGTCTGGTCCAAATGAAGAGTGGAGATGCTCGTGGTCTGCCCGGAACGCTAGCTACTATTTGGGGTCTGAGGGATCGCCTAGCAATCTCGATGGTGGGAGAAAGGCGGTTCCTTTCTGGTTTCAACTTTCTGGTGACACATGCGACCAAGACAAAGGAGGCGGCGGCGGCTAGGGAGCTGGAACCACTGGCTTCATGGGGGCTTGGGCTGGATCTGACTCTAGGATCTGTTTTGGGCTCTCTATTGAGTGGCTATAGGGTTTCTAGACCTAAGGTTTTGCCGGTGATTGCAGGTTGTGCTACAAGCCTAGTGGCAGCTATGGTGGTGACACAAGAACCCAGCCTTGCAGTGGGACCTTCGATGAGGAAGACGGCTGGTAGTGGACTAGTGGTGGTGGAGTGCATCTTAGGGAGGGAGGCAAAAAGCCACAGCGCTCTTCCCATGCAAACCCTAACCCTAGGGGACTTTTTGCTACAAACTTTTCGACTTCGACTCCCCAATGATAATGGGGTTATCAACTTGTCTCCAACCAAGAAACGGGGAAGACCAAAGGGAAGTAAGAGCAAGACTACAAGACTAGAGGTCTTAAGCCCCGAAGGAGTAAGGTGCCCAAGGTTCCTAAAGGGATTAGGGAAGAGGACGTGGCAGCCATGCATGCTGATGGTGAATGAAGATGAATCTGTTGGTGGTGCTGAAATCAATAAGATGGGAGACATTGCTGAGGAAGGTCGTAATCTGCTCTTGGCAGATGCGCCTTCCTCAATAGATGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

344

Amino Acids

37.07

Weight (kDa)

9.48

Isoelectric Point (pI)

36.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 105, 265
Acc36I ACCTGC 1 cut(s) 542
AccB1I GGYRCC 1 cut(s) 867
AccB7I CCANNNNNTGG 1 cut(s) 253
AccII CGCG 3 cut(s) 13, 61, 75
AciI CCGC 6 cut(s) 32, 170, 367, 422, 425, 428
AclWI GGATC 3 cut(s) 342, 480, 493
AcyI GRCGYC 2 cut(s) 102, 262
AfeI AGCGCT 1 cut(s) 694
AfiI CCNNNNNNNGG 6 cut(s) 22, 37, 93, 253, 610, 798
AflII CTTAAG 1 cut(s) 847
AgsI TTSAA 1 cut(s) 385
AhdI GACNNNNNGTC 2 cut(s) 266, 842
AhlI ACTAGT 1 cut(s) 646
AjiI CACGTC 1 cut(s) 903
AjnI CCWGG 2 cut(s) 145, 252
AluBI AGCT 5 cut(s) 130, 230, 314, 439, 578
AluI AGCT 5 cut(s) 130, 230, 314, 439, 578
Alw26I GTCTC 2 cut(s) 789, 966
AlwI GGATC 3 cut(s) 342, 480, 493
Aor51HI AGCGCT 1 cut(s) 694
AoxI GGCC 2 cut(s) 24, 95
ApeKI GCWGC 3 cut(s) 227, 575, 907
AspA2I CCTAGG 1 cut(s) 718
AspLEI GCGC 4 cut(s) 15, 63, 695, 1015
AspS9I GGNCC 3 cut(s) 25, 268, 614
AsuC2I CCSGG 1 cut(s) 303
AsuHPI GGTGA 6 cut(s) 97, 145, 406, 556, 598, 937
AsuNHI GCTAGC 1 cut(s) 310
AvaII GGWCC 2 cut(s) 268, 614
AvrII CCTAGG 1 cut(s) 718
AxyI CCTNAGG 1 cut(s) 531
BaeGI GKGCMC 1 cut(s) 872
BanI GGYRCC 1 cut(s) 867
BanII GRGCYC 1 cut(s) 500
BauI CACGAG 1 cut(s) 291
BbsI GAAGAC 3 cut(s) 157, 635, 811
BbvCI CCTCAGC 1 cut(s) 981
BbvI GCAGC 3 cut(s) 239, 587, 919
BccI CCATC 3 cut(s) 346, 916, 961
BceAI ACGGC 2 cut(s) 39, 648
BciT130I CCWGG 2 cut(s) 147, 254
BcnI CCSGG 1 cut(s) 303
BcoDI GTCTC 2 cut(s) 789, 966
BcuI ACTAGT 1 cut(s) 646
BfaI CTAG 9 cut(s) 311, 341, 432, 482, 525, 569, 647, 719, 839
BfmI CTRYAG 1 cut(s) 514
BfoI RGCGCY 1 cut(s) 696
BfrI CTTAAG 1 cut(s) 847
BfuAI ACCTGC 1 cut(s) 542
BisI GCNGC 6 cut(s) 228, 423, 426, 429, 576, 908
BlnI CCTAGG 1 cut(s) 718
BlpI GCTNAGC 1 cut(s) 126
BlsI GCNGC 6 cut(s) 229, 424, 427, 430, 577, 909
Bme1390I CCNGG 3 cut(s) 147, 254, 303
Bme18I GGWCC 2 cut(s) 268, 614
BmeRI GACNNNNNGTC 2 cut(s) 266, 842
BmgBI CACGTC 1 cut(s) 903
BmgT120I GGNCC 3 cut(s) 25, 268, 614
BmiI GGNNCC 5 cut(s) 371, 444, 615, 869, 878
BmrFI CCNGG 3 cut(s) 147, 254, 303
BmsI GCATC 3 cut(s) 277, 672, 1000
BmtI GCTAGC 1 cut(s) 314
BpiI GAAGAC 3 cut(s) 157, 635, 811
Bpu10I CCTNAGC 1 cut(s) 981
Bpu1102I GCTNAGC 1 cut(s) 126
BpuMI CCSGG 1 cut(s) 303
BsaHI GRCGYC 2 cut(s) 102, 262
BsaJI CCNNGG 2 cut(s) 718, 872
BsaXI ACNNNNNCTCC 2 cut(s) 738, 768
Bsc4I CCNNNNNNNGG 6 cut(s) 22, 37, 93, 253, 610, 798
Bse118I RCCGGY 1 cut(s) 541
Bse1I ACTGG 2 cut(s) 142, 453
Bse21I CCTNAGG 1 cut(s) 531
Bse3DI GCAATG 1 cut(s) 975
BseBI CCWGG 2 cut(s) 147, 254
BseDI CCNNGG 2 cut(s) 718, 872
BseLI CCNNNNNNNGG 6 cut(s) 22, 37, 93, 253, 610, 798
BseMI GCAATG 1 cut(s) 975
BseMII CTCAG 3 cut(s) 117, 320, 972
BseNI ACTGG 2 cut(s) 142, 453
BseSI GKGCMC 1 cut(s) 872
BseXI GCAGC 3 cut(s) 239, 587, 919
BseYI CCCAGC 1 cut(s) 599
Bsh1236I CGCG 3 cut(s) 13, 61, 75
BshFI GGCC 2 cut(s) 26, 97
BshNI GGYRCC 1 cut(s) 867
BsiSI CCGG 2 cut(s) 303, 542
BslFI GGGAC 3 cut(s) 53, 627, 737
BslI CCNNNNNNNGG 6 cut(s) 22, 37, 93, 253, 610, 798
BsmAI GTCTC 2 cut(s) 789, 966
BsmFI GGGAC 3 cut(s) 53, 627, 737
BsnI GGCC 2 cut(s) 26, 97
Bsp1286I GDGCHC 2 cut(s) 500, 872
Bsp143I GATC 3 cut(s) 334, 472, 485
Bsp1720I GCTNAGC 1 cut(s) 126
BspACI CCGC 6 cut(s) 32, 170, 367, 422, 425, 428
BspANI GGCC 2 cut(s) 26, 97
BspCNI CTCAG 3 cut(s) 118, 321, 973
BspFNI CGCG 3 cut(s) 13, 61, 75
BspLI GGNNCC 5 cut(s) 371, 444, 615, 869, 878
BspMI ACCTGC 1 cut(s) 542
BspOI GCTAGC 1 cut(s) 314
BspPI GGATC 3 cut(s) 342, 480, 493
BspQI GCTCTTC 1 cut(s) 702
BspT107I GGYRCC 1 cut(s) 867
BspTI CTTAAG 1 cut(s) 847
BsrDI GCAATG 1 cut(s) 975
BsrFI RCCGGY 1 cut(s) 541
BsrI ACTGG 2 cut(s) 142, 453
BssAI RCCGGY 1 cut(s) 541
BssECI CCNNGG 2 cut(s) 718, 872
BssMI GATC 3 cut(s) 334, 472, 485
BssNI GRCGYC 2 cut(s) 102, 262
BssSI CACGAG 1 cut(s) 291
BssT1I CCWWGG 2 cut(s) 718, 872
Bst2BI CACGAG 1 cut(s) 291
Bst2UI CCWGG 2 cut(s) 147, 254
Bst6I CTCTTC 4 cut(s) 186, 272, 702, 890
BstACI GRCGYC 2 cut(s) 102, 262
BstAFI CTTAAG 1 cut(s) 847
BstAPI GCANNNNNTGC 1 cut(s) 557
BstC8I GCNNGC 5 cut(s) 59, 73, 143, 312, 917
BstDEI CTNAG 5 cut(s) 126, 329, 531, 667, 981
BstFNI CGCG 3 cut(s) 13, 61, 75
BstH2I RGCGCY 1 cut(s) 696
BstHHI GCGC 4 cut(s) 15, 63, 695, 1015
BstKTI GATC 3 cut(s) 337, 475, 488
BstMAI GTCTC 2 cut(s) 789, 966
BstMBI GATC 3 cut(s) 334, 472, 485
BstMWI GCNNNNNNNGC 4 cut(s) 307, 428, 557, 916
BstNI CCWGG 2 cut(s) 147, 254
BstNSI RCATGY 3 cut(s) 158, 404, 919
BstSCI CCNGG 3 cut(s) 145, 252, 301
BstSFI CTRYAG 1 cut(s) 514
BstSLI GKGCMC 1 cut(s) 872
BstUI CGCG 3 cut(s) 13, 61, 75
BstV1I GCAGC 3 cut(s) 239, 587, 919
BstV2I GAAGAC 3 cut(s) 157, 635, 811
BstX2I RGATCY 2 cut(s) 472, 485
BstYI RGATCY 2 cut(s) 472, 485
Bsu36I CCTNAGG 1 cut(s) 531
BsuRI GGCC 2 cut(s) 26, 97
BtrI CACGTC 1 cut(s) 903
BtsI GCAGTG 2 cut(s) 204, 615
BtsIMutI CAGTG 3 cut(s) 204, 446, 615
BveI ACCTGC 1 cut(s) 542
Cac8I GCNNGC 5 cut(s) 59, 73, 143, 312, 917
CfoI GCGC 4 cut(s) 15, 63, 695, 1015
Cfr10I RCCGGY 1 cut(s) 541
Cfr13I GGNCC 3 cut(s) 25, 268, 614
CsiI ACCWGGT 1 cut(s) 252
CspCI CAANNNNNGTGG 2 cut(s) 552, 587
CviAII CATG 6 cut(s) 155, 401, 456, 703, 912, 916
DdeI CTNAG 5 cut(s) 126, 329, 531, 667, 981
DpnI GATC 3 cut(s) 336, 474, 487
DpnII GATC 3 cut(s) 334, 472, 485
DriI GACNNNNNGTC 2 cut(s) 266, 842
Eam1104I CTCTTC 4 cut(s) 186, 272, 702, 890
Eam1105I GACNNNNNGTC 2 cut(s) 266, 842
EarI CTCTTC 4 cut(s) 186, 272, 702, 890
EciI GGCGGA 1 cut(s) 185
Eco130I CCWWGG 2 cut(s) 718, 872
Eco147I AGGCCT 1 cut(s) 97
Eco24I GRGCYC 1 cut(s) 500
Eco47I GGWCC 2 cut(s) 268, 614
Eco47III AGCGCT 1 cut(s) 694
Eco81I CCTNAGG 1 cut(s) 531
EcoO109I RGGNCCY 1 cut(s) 614
EcoRII CCWGG 2 cut(s) 145, 252
EcoT14I CCWWGG 2 cut(s) 718, 872
EcoT22I ATGCAT 1 cut(s) 917
EcoT38I GRGCYC 1 cut(s) 500
ErhI CCWWGG 2 cut(s) 718, 872
FaeI CATG 6 cut(s) 158, 404, 459, 706, 915, 919
FaiI YATR 8 cut(s) 156, 402, 457, 516, 581, 704, 913, 917
FalI AAGNNNNNCTT 2 cut(s) 142, 174
FaqI GGGAC 3 cut(s) 53, 627, 737
FatI CATG 6 cut(s) 154, 400, 455, 702, 911, 915
FauI CCCGC 1 cut(s) 39
Fnu4HI GCNGC 6 cut(s) 228, 423, 426, 429, 576, 908
FriOI GRGCYC 1 cut(s) 500
Fsp4HI GCNGC 6 cut(s) 228, 423, 426, 429, 576, 908
FspBI CTAG 9 cut(s) 311, 341, 432, 482, 525, 569, 647, 719, 839
GlaI GCGC 4 cut(s) 14, 62, 694, 1014
GluI GCNGC 6 cut(s) 228, 423, 426, 429, 576, 908
GsaI CCCAGC 1 cut(s) 603
HaeII RGCGCY 1 cut(s) 696
HaeIII GGCC 2 cut(s) 26, 97
HapII CCGG 2 cut(s) 303, 542
HhaI GCGC 4 cut(s) 15, 63, 695, 1015
Hin1I GRCGYC 2 cut(s) 102, 262
Hin1II CATG 6 cut(s) 158, 404, 459, 706, 915, 919
Hin6I GCGC 4 cut(s) 13, 61, 693, 1013
HinP1I GCGC 4 cut(s) 13, 61, 693, 1013
HinfI GANTC 3 cut(s) 478, 753, 938
HpaII CCGG 2 cut(s) 303, 542
HphI GGTGA 6 cut(s) 97, 145, 406, 556, 598, 937
Hpy166II GTNNAC 1 cut(s) 644
Hpy188I TCNGA 2 cut(s) 330, 477
Hpy188III TCNNGA 2 cut(s) 349, 525
Hpy8I GTNNAC 1 cut(s) 644
HpyAV CCTTC 4 cut(s) 627, 851, 980, 1026
HpyCH4IV ACGT 3 cut(s) 102, 262, 902
HpyCH4V TGCA 6 cut(s) 57, 551, 608, 663, 706, 915
HpyF10VI GCNNNNNNNGC 4 cut(s) 307, 428, 557, 916
HpyF3I CTNAG 5 cut(s) 126, 329, 531, 667, 981
HpySE526I ACGT 3 cut(s) 102, 262, 902
Hsp92I GRCGYC 2 cut(s) 102, 262
Hsp92II CATG 6 cut(s) 158, 404, 459, 706, 915, 919
HspAI GCGC 4 cut(s) 13, 61, 693, 1013
Kzo9I GATC 3 cut(s) 334, 472, 485
LguI GCTCTTC 1 cut(s) 702
LmnI GCTCC 1 cut(s) 436
Lsp1109I GCAGC 3 cut(s) 239, 587, 919
LweI GCATC 3 cut(s) 277, 672, 1000
MabI ACCWGGT 1 cut(s) 252
MaeI CTAG 9 cut(s) 311, 341, 432, 482, 525, 569, 647, 719, 839
MaeII ACGT 3 cut(s) 102, 262, 902
MaeIII GTNAC 5 cut(s) 103, 133, 232, 394, 586
MalI GATC 3 cut(s) 336, 474, 487
MboI GATC 3 cut(s) 334, 472, 485
MboII GAAGA 9 cut(s) 106, 162, 203, 289, 640, 689, 816, 907, 944
MflI RGATCY 2 cut(s) 472, 485
MhlI GDGCHC 2 cut(s) 500, 872
MluCI AATT 1 cut(s) 47
MlyI GAGTC 2 cut(s) 472, 747
MmeI TCCRAC 3 cut(s) 30, 238, 812
Mph1103I ATGCAT 1 cut(s) 917
MseI TTAA 1 cut(s) 848
MslI CAYNNNNRTG 1 cut(s) 920
MspA1I CMGCKG 1 cut(s) 230
MspCI CTTAAG 1 cut(s) 847
MspI CCGG 2 cut(s) 303, 542
MspR9I CCNGG 3 cut(s) 147, 254, 303
MvaI CCWGG 2 cut(s) 147, 254
MvnI CGCG 3 cut(s) 13, 61, 75
MwoI GCNNNNNNNGC 4 cut(s) 307, 428, 557, 916
NciI CCSGG 1 cut(s) 303
NdeII GATC 3 cut(s) 334, 472, 485
NheI GCTAGC 1 cut(s) 310
NlaIII CATG 6 cut(s) 158, 404, 459, 706, 915, 919
NlaIV GGNNCC 5 cut(s) 371, 444, 615, 869, 878
NmuCI GTSAC 5 cut(s) 103, 133, 232, 394, 586
NsiI ATGCAT 1 cut(s) 917
NspI RCATGY 3 cut(s) 158, 404, 919
PaeI GCATGC 1 cut(s) 919
PceI AGGCCT 1 cut(s) 97
PciSI GCTCTTC 1 cut(s) 702
PfeI GAWTC 1 cut(s) 938
PflMI CCANNNNNTGG 1 cut(s) 253
PkrI GCNGC 6 cut(s) 229, 424, 427, 430, 577, 909
PleI GAGTC 2 cut(s) 472, 747
PpsI GAGTC 2 cut(s) 472, 747
PpuMI RGGWCCY 1 cut(s) 614
Psp5II RGGWCCY 1 cut(s) 614
Psp6I CCWGG 2 cut(s) 145, 252
PspFI CCCAGC 1 cut(s) 599
PspGI CCWGG 2 cut(s) 145, 252
PspN4I GGNNCC 5 cut(s) 371, 444, 615, 869, 878
PspPI GGNCC 3 cut(s) 25, 268, 614
PspPPI RGGWCCY 1 cut(s) 614
PsrI GAACNNNNNNTAC 2 cut(s) 298, 330
PsuI RGATCY 2 cut(s) 472, 485
PvuII CAGCTG 1 cut(s) 230
RseI CAYNNNNRTG 1 cut(s) 920
SapI GCTCTTC 1 cut(s) 702
SaqAI TTAA 1 cut(s) 848
SatI GCNGC 6 cut(s) 228, 423, 426, 429, 576, 908
Sau3AI GATC 3 cut(s) 334, 472, 485
Sau96I GGNCC 3 cut(s) 25, 268, 614
SchI GAGTC 2 cut(s) 472, 747
ScrFI CCNGG 3 cut(s) 147, 254, 303
SduI GDGCHC 2 cut(s) 500, 872
SexAI ACCWGGT 1 cut(s) 252
SfaNI GCATC 3 cut(s) 277, 672, 1000
SfcI CTRYAG 1 cut(s) 514
SinI GGWCC 2 cut(s) 268, 614
SmiMI CAYNNNNRTG 1 cut(s) 920
SmlI CTYRAG 1 cut(s) 847
SmoI CTYRAG 1 cut(s) 847
SpeI ACTAGT 1 cut(s) 646
SphI GCATGC 1 cut(s) 919
Sse9I AATT 1 cut(s) 47
SseBI AGGCCT 1 cut(s) 97
SsiI CCGC 6 cut(s) 32, 170, 367, 422, 425, 428
SspMI CTAG 9 cut(s) 311, 341, 432, 482, 525, 569, 647, 719, 839
StuI AGGCCT 1 cut(s) 97
StyD4I CCNGG 3 cut(s) 145, 252, 301
StyI CCWWGG 2 cut(s) 718, 872
TaiI ACGT 3 cut(s) 105, 265, 905
TaqI TCGA 4 cut(s) 350, 620, 745, 751
TasI AATT 1 cut(s) 47
TauI GCSGC 3 cut(s) 425, 428, 431
TfiI GAWTC 1 cut(s) 938
Tru1I TTAA 1 cut(s) 848
Tru9I TTAA 1 cut(s) 848
TscAI CASTG 3 cut(s) 204, 453, 615
TseFI GTSAC 5 cut(s) 103, 133, 232, 394, 586
TseI GCWGC 3 cut(s) 227, 575, 907
Tsp45I GTSAC 5 cut(s) 103, 133, 232, 394, 586
TspDTI ATGAA 4 cut(s) 290, 444, 945, 951
TspGWI ACGGA 1 cut(s) 203
TspRI CASTG 3 cut(s) 204, 453, 615
Van91I CCANNNNNTGG 1 cut(s) 253
Vha464I CTTAAG 1 cut(s) 847
VpaK11BI GGWCC 2 cut(s) 268, 614
XbaI TCTAGA 1 cut(s) 524
XceI RCATGY 3 cut(s) 158, 404, 919
XcmI CCANNNNNNNNNTGG 4 cut(s) 254, 278, 453, 607
XmaJI CCTAGG 1 cut(s) 718
XspI CTAG 9 cut(s) 311, 341, 432, 482, 525, 569, 647, 719, 839
ZraI GACGTC 2 cut(s) 103, 263
Zsp2I ATGCAT 1 cut(s) 917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.