pycom09g04120

G-type lectin S-receptor-like serine threonine-protein kinase At2g19130

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
3050535 .. 3052080
1546 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g04120.2

Sequence Viewer

Length: 1500 bp
ATGAGATACAAACTTTTGATCAATGGTCGACTCAAGTTTTATGACGGGGTTGAGACAAAAGACTCTTGGGGTGTTCAGCTTGGAGAATGTACTGACGATGCTTCATGTGGTGCTTTTAGTATCTGCGACTCTCAGAATTTGCCTCGTTGTCGATGCTTGGACGGATTTGAACCCCAAATCCCAGAAGATTGGGATTTTGGAGGTTATTCTTATGGTTGTGTGAGGAAAACTCCTTTGCAGTGCAGTGATGTAGGAACTTACAAATTTTTGGGAGAGCCTGATGTTTATTCTTCGCAACATGCTGAGTCTTTAAAGGTTAAAAGCATTGAGGAATGTATATTAGCATGCTCAAGAGATTGCTCAATCACCGCCTTTGTTTACGATGACGACTGTAAGATTTGGAAAGGGGATATATTCAATCTGATTCAACTACCATCTTCCCTGACTAAACTAATAGATTACAGAAAAATGCATGTACGAGTTGCAGATTCTACCAACGAGGTAAAGAGAAAGATTACTTGGATTGCTGTTGGAGTACTTGCGGGGTTCCTTCCAATCTCAACCATTCTCATGGTATTTCTCATAAGGAAGCGGTCAAAAGGAGCATCGCCAATAGTTCAGGATTCCTTGGTGCTGTTCAAGTATAAAGATTTAAGAAGAGCAACAGACAACTTCTCAGAAAAACTTGGGGAAGGAGGTTTTGGTTCTGTTTTCAAGGGGATATTGCCTAATTCAACTGATATAGCAGTGAAAAAACTTAAATATCTGGAGCAGGGAGAGAAACAATTTCGTGTTGAAGTGGGAACCATTGGCGCTATCCACCACATTAATGTTGTTCGCCTTTGGGGTTTTTGCACAGAAACTTCAAAACGACTTTTGGTCTATGAGTACATGCCAAATAGTTCTCTGCAATCTCTTTTTCATCAAGAGAATGCACTAATGTTAGATTGGGATGCCAGATATCATATTGCAGTAGGGACTGCCAGAGGATTGGCTTACCTACATGAGGAGTGCCGAGACTGCATAATACACTGTGATATTAAGCCCGACAACATTTTGTTGGATGCAGAATACAGTCCAAAACTGGCTGATTTTGGTCTTGCAAAACTTGTCGGAAGACACCATAGCCGCGTTCTGACAACCATGAGAGGAACTGTAGGTTATCTTGCACCAGAATGGTTTTCAGGTGAAGCCATCACACCAAAAGCTGATGTATTTAGCTATGGCATGTTGCTGATTGAGGTTATAACAGGAAGGAGAAATAGAGAAGGGTTAAATGAGGGGTTAGAAAACTATCGTCCTCTCATGGTTGCCAATGTAGTTAATAAGGGAGAAGATGTTGGTACTTTGTTGGATTACAGGTTGGAAGGCCGTGCTGACAAAGATGAACTCGCTAAAGCATGCAAAGTCGCTTGTTGGTGCATTCAAGAAGATGAGAAGGATAGGCCAACGATGAGGCAGGTTGTTCAAATTCTTGAGGGAGTTTCAGATGTCCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

500

Amino Acids

56.29

Weight (kDa)

6.17

Isoelectric Point (pI)

42.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1247
Acc36I ACCTGC 1 cut(s) 1450
AccI GTMKAC 1 cut(s) 28
AccII CGCG 1 cut(s) 1131
AciI CCGC 4 cut(s) 369, 542, 592, 1129
AcsI RAATTY 3 cut(s) 136, 263, 1470
AfaI GTAC 5 cut(s) 91, 477, 537, 890, 1345
AfiI CCNNNNNNNGG 1 cut(s) 1006
AhdI GACNNNNNGTC 1 cut(s) 878
AjuI GAANNNNNNNTTGG 4 cut(s) 502, 534, 684, 716
AloI GAACNNNNNNTCC 2 cut(s) 162, 194
AluBI AGCT 3 cut(s) 79, 1208, 1221
AluI AGCT 3 cut(s) 79, 1208, 1221
Alw26I GTCTC 2 cut(s) 47, 1011
AoxI GGCC 2 cut(s) 1369, 1445
ApoI RAATTY 3 cut(s) 136, 263, 1470
AseI ATTAAT 1 cut(s) 828
AspLEI GCGC 1 cut(s) 815
AsuHPI GGTGA 2 cut(s) 358, 1199
BbsI GAAGAC 1 cut(s) 1123
BccI CCATC 2 cut(s) 442, 1202
BceAI ACGGC 1 cut(s) 1356
BclI TGATCA 1 cut(s) 18
BcoDI GTCTC 2 cut(s) 47, 1011
BfmI CTRYAG 1 cut(s) 1155
BfoI RGCGCY 1 cut(s) 816
BfuAI ACCTGC 1 cut(s) 1450
BisI GCNGC 1 cut(s) 1129
BlsI GCNGC 1 cut(s) 1130
BmcAI AGTACT 1 cut(s) 537
BmeRI GACNNNNNGTC 1 cut(s) 878
BmiI GGNNCC 2 cut(s) 548, 805
BmsI GCATC 5 cut(s) 88, 143, 614, 943, 1054
BpiI GAAGAC 1 cut(s) 1123
BplI GAGNNNNNCTC 2 cut(s) 214, 246
BpmI CTGGAG 1 cut(s) 788
BpuEI CTTGAG 3 cut(s) 17, 334, 1496
BsaJI CCNNGG 1 cut(s) 627
BsaXI ACNNNNNCTCC 2 cut(s) 1323, 1353
Bsc4I CCNNNNNNNGG 1 cut(s) 1006
Bse1I ACTGG 1 cut(s) 1089
BseDI CCNNGG 1 cut(s) 627
BseGI GGATG 2 cut(s) 958, 1069
BseLI CCNNNNNNNGG 1 cut(s) 1006
BseMII CTCAG 3 cut(s) 146, 294, 690
BseNI ACTGG 1 cut(s) 1089
BseRI GAGGAG 1 cut(s) 1022
BsgI GTGCAG 1 cut(s) 262
Bsh1236I CGCG 1 cut(s) 1131
BshFI GGCC 2 cut(s) 1371, 1447
BslFI GGGAC 1 cut(s) 991
BslI CCNNNNNNNGG 1 cut(s) 1006
BsmAI GTCTC 2 cut(s) 47, 1011
BsmFI GGGAC 1 cut(s) 991
BsmI GAATGC 2 cut(s) 937, 1422
BsnI GGCC 2 cut(s) 1371, 1447
Bsp143I GATC 1 cut(s) 18
BspACI CCGC 4 cut(s) 369, 542, 592, 1129
BspANI GGCC 2 cut(s) 1371, 1447
BspCNI CTCAG 3 cut(s) 145, 295, 689
BspFNI CGCG 1 cut(s) 1131
BspLI GGNNCC 2 cut(s) 548, 805
BspMI ACCTGC 1 cut(s) 1450
BspQI GCTCTTC 1 cut(s) 652
BsrI ACTGG 1 cut(s) 1089
BssECI CCNNGG 1 cut(s) 627
BssMI GATC 1 cut(s) 18
BssT1I CCWWGG 1 cut(s) 627
Bst4CI ACNGT 4 cut(s) 392, 1034, 1076, 1156
Bst6I CTCTTC 1 cut(s) 652
BstC8I GCNNGC 2 cut(s) 346, 1402
BstDEI CTNAG 3 cut(s) 132, 303, 676
BstENI CCTNNNNNAGG 1 cut(s) 1004
BstF5I GGATG 2 cut(s) 958, 1069
BstFNI CGCG 1 cut(s) 1131
BstH2I RGCGCY 1 cut(s) 816
BstHHI GCGC 1 cut(s) 815
BstKTI GATC 1 cut(s) 21
BstMAI GTCTC 2 cut(s) 47, 1011
BstMBI GATC 1 cut(s) 18
BstMWI GCNNNNNNNGC 1 cut(s) 1020
BstNSI RCATGY 6 cut(s) 302, 348, 476, 895, 1231, 1404
BstSFI CTRYAG 1 cut(s) 1155
BstUI CGCG 1 cut(s) 1131
BstV2I GAAGAC 1 cut(s) 1123
BstXI CCANNNNNNTGG 3 cut(s) 189, 571, 991
BsuRI GGCC 2 cut(s) 1371, 1447
BtgZI GCGATG 1 cut(s) 591
BtsCI GGATG 2 cut(s) 958, 1069
BtsI GCAGTG 3 cut(s) 245, 250, 753
BtsIMutI CAGTG 4 cut(s) 245, 250, 753, 1030
BveI ACCTGC 1 cut(s) 1450
Cac8I GCNNGC 2 cut(s) 346, 1402
CfoI GCGC 1 cut(s) 815
Csp6I GTAC 5 cut(s) 90, 476, 536, 889, 1344
CviQI GTAC 5 cut(s) 90, 476, 536, 889, 1344
DdeI CTNAG 3 cut(s) 132, 303, 676
DpnI GATC 1 cut(s) 20
DpnII GATC 1 cut(s) 18
DraI TTTAAA 1 cut(s) 312
DriI GACNNNNNGTC 1 cut(s) 878
Eam1104I CTCTTC 1 cut(s) 652
Eam1105I GACNNNNNGTC 1 cut(s) 878
EarI CTCTTC 1 cut(s) 652
Eco130I CCWWGG 1 cut(s) 627
Eco32I GATATC 1 cut(s) 962
EcoNI CCTNNNNNAGG 1 cut(s) 1004
EcoRV GATATC 1 cut(s) 962
EcoT14I CCWWGG 1 cut(s) 627
EcoT22I ATGCAT 1 cut(s) 474
ErhI CCWWGG 1 cut(s) 627
FaqI GGGAC 1 cut(s) 991
FauI CCCGC 1 cut(s) 535
FbaI TGATCA 1 cut(s) 18
FblI GTMKAC 1 cut(s) 28
Fnu4HI GCNGC 1 cut(s) 1129
FokI GGATG 2 cut(s) 965, 1076
Fsp4HI GCNGC 1 cut(s) 1129
GlaI GCGC 1 cut(s) 814
GluI GCNGC 1 cut(s) 1129
GsuI CTGGAG 1 cut(s) 788
HaeII RGCGCY 1 cut(s) 816
HaeIII GGCC 2 cut(s) 1371, 1447
HhaI GCGC 1 cut(s) 815
Hin6I GCGC 1 cut(s) 813
HinP1I GCGC 1 cut(s) 813
HincII GTYRAC 1 cut(s) 29
HindII GTYRAC 1 cut(s) 29
HinfI GANTC 7 cut(s) 30, 62, 128, 305, 424, 488, 623
HphI GGTGA 2 cut(s) 358, 1199
Hpy166II GTNNAC 2 cut(s) 29, 379
Hpy188I TCNGA 6 cut(s) 135, 423, 679, 1115, 1137, 1489
Hpy188III TCNNGA 6 cut(s) 351, 620, 767, 926, 1427, 1475
Hpy8I GTNNAC 2 cut(s) 29, 379
HpyAV CCTTC 6 cut(s) 560, 686, 1248, 1262, 1361, 1432
HpyCH4III ACNGT 4 cut(s) 392, 1034, 1076, 1156
HpyF10VI GCNNNNNNNGC 1 cut(s) 1020
HpyF3I CTNAG 3 cut(s) 132, 303, 676
HspAI GCGC 1 cut(s) 813
Ksp22I TGATCA 1 cut(s) 18
Kzo9I GATC 1 cut(s) 18
LguI GCTCTTC 1 cut(s) 652
LmnI GCTCC 2 cut(s) 602, 769
LweI GCATC 5 cut(s) 88, 143, 614, 943, 1054
MalI GATC 1 cut(s) 20
MboI GATC 1 cut(s) 18
MboII GAAGA 7 cut(s) 197, 282, 429, 669, 1128, 1346, 1442
MluCI AATT 5 cut(s) 136, 263, 730, 785, 1470
MlyI GAGTC 4 cut(s) 24, 56, 122, 314
MmeI TCCRAC 5 cut(s) 511, 1041, 1093, 1332, 1344
Mph1103I ATGCAT 1 cut(s) 474
MseI TTAA 8 cut(s) 311, 318, 653, 759, 828, 1041, 1274, 1323
MslI CAYNNNNRTG 3 cut(s) 569, 828, 1174
Mva1269I GAATGC 2 cut(s) 937, 1422
MvnI CGCG 1 cut(s) 1131
MwoI GCNNNNNNNGC 1 cut(s) 1020
NdeII GATC 1 cut(s) 18
NlaIV GGNNCC 2 cut(s) 548, 805
NmeAIII GCCGAG 1 cut(s) 1040
NsiI ATGCAT 1 cut(s) 474
NspI RCATGY 6 cut(s) 302, 348, 476, 895, 1231, 1404
PaeI GCATGC 2 cut(s) 348, 1404
PciSI GCTCTTC 1 cut(s) 652
PctI GAATGC 2 cut(s) 937, 1422
PfeI GAWTC 3 cut(s) 424, 488, 623
PkrI GCNGC 1 cut(s) 1130
PleI GAGTC 4 cut(s) 24, 56, 122, 313
PpsI GAGTC 4 cut(s) 24, 56, 122, 313
PshBI ATTAAT 1 cut(s) 828
PsiI TTATAA 1 cut(s) 1247
PspN4I GGNNCC 2 cut(s) 548, 805
RsaI GTAC 5 cut(s) 91, 477, 537, 890, 1345
RsaNI GTAC 5 cut(s) 90, 476, 536, 889, 1344
RseI CAYNNNNRTG 3 cut(s) 569, 828, 1174
SalI GTCGAC 1 cut(s) 27
SapI GCTCTTC 1 cut(s) 652
SaqAI TTAA 8 cut(s) 311, 318, 653, 759, 828, 1041, 1274, 1323
SatI GCNGC 1 cut(s) 1129
Sau3AI GATC 1 cut(s) 18
ScaI AGTACT 1 cut(s) 537
SchI GAGTC 4 cut(s) 24, 56, 122, 314
SfaNI GCATC 5 cut(s) 88, 143, 614, 943, 1054
SfcI CTRYAG 1 cut(s) 1155
SmiMI CAYNNNNRTG 3 cut(s) 569, 828, 1174
SmlI CTYRAG 3 cut(s) 32, 349, 1475
SmoI CTYRAG 3 cut(s) 32, 349, 1475
SphI GCATGC 2 cut(s) 348, 1404
Sse9I AATT 5 cut(s) 136, 263, 730, 785, 1470
SsiI CCGC 4 cut(s) 369, 542, 592, 1129
StyI CCWWGG 1 cut(s) 627
TaaI ACNGT 4 cut(s) 392, 1034, 1076, 1156
TaqI TCGA 2 cut(s) 28, 151
TasI AATT 5 cut(s) 136, 263, 730, 785, 1470
TatI WGTACW 3 cut(s) 89, 535, 888
TauI GCSGC 1 cut(s) 1131
TfiI GAWTC 3 cut(s) 424, 488, 623
Tru1I TTAA 8 cut(s) 311, 318, 653, 759, 828, 1041, 1274, 1323
Tru9I TTAA 8 cut(s) 311, 318, 653, 759, 828, 1041, 1274, 1323
TscAI CASTG 4 cut(s) 245, 250, 753, 1037
TspDTI ATGAA 3 cut(s) 93, 911, 1401
TspGWI ACGGA 1 cut(s) 177
TspRI CASTG 4 cut(s) 245, 250, 753, 1037
VspI ATTAAT 1 cut(s) 828
XagI CCTNNNNNAGG 1 cut(s) 1004
XapI RAATTY 3 cut(s) 136, 263, 1470
XceI RCATGY 6 cut(s) 302, 348, 476, 895, 1231, 1404
XmiI GTMKAC 1 cut(s) 28
ZrmI AGTACT 1 cut(s) 537
Zsp2I ATGCAT 1 cut(s) 474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.