tetratricopeptide repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TTC5_OB | PF16669 | 298 - 410 | 3.1e-37 | Tetratricopeptide repeat protein 5 OB fold domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 449 |
| AccB1I | GGYRCC | 1 cut(s) | 449 |
| AciI | CCGC | 1 cut(s) | 42 |
| AclI | AACGTT | 1 cut(s) | 987 |
| AclWI | GGATC | 3 cut(s) | 270, 746, 759 |
| AcoI | YGGCCR | 2 cut(s) | 33, 90 |
| AcsI | RAATTY | 1 cut(s) | 529 |
| AcuI | CTGAAG | 1 cut(s) | 339 |
| AfaI | GTAC | 4 cut(s) | 451, 539, 1001, 1228 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 388 |
| AhlI | ACTAGT | 1 cut(s) | 949 |
| AjnI | CCWGG | 1 cut(s) | 754 |
| AluBI | AGCT | 8 cut(s) | 50, 59, 278, 584, 737, 905, 1087, 1220 |
| AluI | AGCT | 8 cut(s) | 50, 59, 278, 584, 737, 905, 1087, 1220 |
| Alw26I | GTCTC | 2 cut(s) | 69, 764 |
| AlwI | GGATC | 3 cut(s) | 270, 746, 759 |
| AoxI | GGCC | 4 cut(s) | 33, 90, 717, 1200 |
| ApaI | GGGCCC | 1 cut(s) | 721 |
| ApeKI | GCWGC | 3 cut(s) | 50, 737, 740 |
| ApoI | RAATTY | 1 cut(s) | 529 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 483, 1104 |
| Asp718I | GGTACC | 1 cut(s) | 449 |
| AspS9I | GGNCC | 5 cut(s) | 392, 589, 717, 718, 1201 |
| AsuC2I | CCSGG | 1 cut(s) | 98 |
| AsuHPI | GGTGA | 1 cut(s) | 1205 |
| AvaII | GGWCC | 2 cut(s) | 392, 589 |
| BaeGI | GKGCMC | 1 cut(s) | 721 |
| BalI | TGGCCA | 1 cut(s) | 35 |
| BamHI | GGATCC | 1 cut(s) | 751 |
| BanI | GGYRCC | 1 cut(s) | 449 |
| BanII | GRGCYC | 1 cut(s) | 721 |
| BbsI | GAAGAC | 1 cut(s) | 27 |
| BbvI | GCAGC | 3 cut(s) | 37, 724, 727 |
| BccI | CCATC | 2 cut(s) | 301, 518 |
| BceAI | ACGGC | 1 cut(s) | 488 |
| BciT130I | CCWGG | 1 cut(s) | 756 |
| BcnI | CCSGG | 1 cut(s) | 98 |
| BcoDI | GTCTC | 2 cut(s) | 69, 764 |
| BcuI | ACTAGT | 1 cut(s) | 949 |
| BfaI | CTAG | 2 cut(s) | 834, 950 |
| BfmI | CTRYAG | 2 cut(s) | 768, 909 |
| BglII | AGATCT | 2 cut(s) | 346, 836 |
| BisI | GCNGC | 4 cut(s) | 42, 51, 738, 741 |
| BlsI | GCNGC | 4 cut(s) | 43, 52, 739, 742 |
| Bme1390I | CCNGG | 2 cut(s) | 98, 756 |
| Bme18I | GGWCC | 2 cut(s) | 392, 589 |
| BmgT120I | GGNCC | 5 cut(s) | 392, 589, 717, 718, 1201 |
| BmiI | GGNNCC | 6 cut(s) | 393, 451, 590, 719, 753, 1101 |
| BmrFI | CCNGG | 2 cut(s) | 98, 756 |
| BmsI | GCATC | 3 cut(s) | 295, 414, 869 |
| BoxI | GACNNNNGTC | 1 cut(s) | 850 |
| BpiI | GAAGAC | 1 cut(s) | 27 |
| BpmI | CTGGAG | 2 cut(s) | 97, 600 |
| Bpu10I | CCTNAGC | 1 cut(s) | 383 |
| BpuEI | CTTGAG | 2 cut(s) | 188, 429 |
| BpuMI | CCSGG | 1 cut(s) | 98 |
| BsaBI | GATNNNNATC | 2 cut(s) | 132, 1020 |
| BsaI | GGTCTC | 1 cut(s) | 764 |
| BsaJI | CCNNGG | 1 cut(s) | 495 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 95, 125, 872, 902 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 388 |
| Bse1I | ACTGG | 4 cut(s) | 36, 231, 583, 1101 |
| Bse8I | GATNNNNATC | 2 cut(s) | 132, 1020 |
| BseBI | CCWGG | 1 cut(s) | 756 |
| BseDI | CCNNGG | 1 cut(s) | 495 |
| BseGI | GGATG | 5 cut(s) | 106, 181, 235, 529, 646 |
| BseJI | GATNNNNATC | 2 cut(s) | 132, 1020 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 388 |
| BseMII | CTCAG | 1 cut(s) | 203 |
| BseNI | ACTGG | 4 cut(s) | 36, 231, 583, 1101 |
| BseRI | GAGGAG | 5 cut(s) | 59, 140, 788, 880, 1200 |
| BseSI | GKGCMC | 1 cut(s) | 721 |
| BseX3I | CGGCCG | 1 cut(s) | 90 |
| BseXI | GCAGC | 3 cut(s) | 37, 724, 727 |
| Bsh1285I | CGRYCG | 1 cut(s) | 93 |
| BshFI | GGCC | 4 cut(s) | 35, 92, 719, 1202 |
| BshNI | GGYRCC | 1 cut(s) | 449 |
| BsiEI | CGRYCG | 1 cut(s) | 93 |
| BsiSI | CCGG | 4 cut(s) | 89, 98, 185, 869 |
| BslFI | GGGAC | 1 cut(s) | 602 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 388 |
| BsmAI | GTCTC | 2 cut(s) | 69, 764 |
| BsmFI | GGGAC | 1 cut(s) | 602 |
| BsmI | GAATGC | 3 cut(s) | 483, 654, 1053 |
| BsnI | GGCC | 4 cut(s) | 35, 92, 719, 1202 |
| Bso31I | GGTCTC | 1 cut(s) | 764 |
| Bsp120I | GGGCCC | 1 cut(s) | 717 |
| Bsp1286I | GDGCHC | 1 cut(s) | 721 |
| Bsp143I | GATC | 7 cut(s) | 133, 262, 346, 751, 836, 1068, 1081 |
| BspACI | CCGC | 1 cut(s) | 42 |
| BspANI | GGCC | 4 cut(s) | 35, 92, 719, 1202 |
| BspCNI | CTCAG | 1 cut(s) | 204 |
| BspLI | GGNNCC | 6 cut(s) | 393, 451, 590, 719, 753, 1101 |
| BspPI | GGATC | 3 cut(s) | 270, 746, 759 |
| BspT107I | GGYRCC | 1 cut(s) | 449 |
| BspTNI | GGTCTC | 1 cut(s) | 764 |
| BsrI | ACTGG | 4 cut(s) | 36, 231, 583, 1101 |
| BssECI | CCNNGG | 1 cut(s) | 495 |
| BssMI | GATC | 7 cut(s) | 133, 262, 346, 751, 836, 1068, 1081 |
| BssT1I | CCWWGG | 1 cut(s) | 495 |
| Bst2UI | CCWGG | 1 cut(s) | 756 |
| Bst4CI | ACNGT | 5 cut(s) | 680, 688, 910, 999, 1182 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 50 |
| BstC8I | GCNNGC | 2 cut(s) | 831, 1012 |
| BstDEI | CTNAG | 2 cut(s) | 212, 383 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 386 |
| BstF5I | GGATG | 5 cut(s) | 106, 181, 235, 529, 646 |
| BstKTI | GATC | 7 cut(s) | 136, 265, 349, 754, 839, 1071, 1084 |
| BstMAI | GTCTC | 2 cut(s) | 69, 764 |
| BstMBI | GATC | 7 cut(s) | 133, 262, 346, 751, 836, 1068, 1081 |
| BstMCI | CGRYCG | 1 cut(s) | 93 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 41, 47, 50, 56, 194, 500 |
| BstNI | CCWGG | 1 cut(s) | 756 |
| BstNSI | RCATGY | 4 cut(s) | 494, 558, 833, 1014 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 850 |
| BstSCI | CCNGG | 2 cut(s) | 96, 754 |
| BstSFI | CTRYAG | 2 cut(s) | 768, 909 |
| BstSLI | GKGCMC | 1 cut(s) | 721 |
| BstV1I | GCAGC | 3 cut(s) | 37, 724, 727 |
| BstV2I | GAAGAC | 1 cut(s) | 27 |
| BstX2I | RGATCY | 3 cut(s) | 346, 751, 836 |
| BstYI | RGATCY | 3 cut(s) | 346, 751, 836 |
| BstZI | CGGCCG | 1 cut(s) | 90 |
| BsuRI | GGCC | 4 cut(s) | 35, 92, 719, 1202 |
| BtsCI | GGATG | 5 cut(s) | 106, 181, 235, 529, 646 |
| BtsI | GCAGTG | 1 cut(s) | 21 |
| BtsIMutI | CAGTG | 4 cut(s) | 21, 29, 684, 995 |
| Cac8I | GCNNGC | 2 cut(s) | 831, 1012 |
| Cfr13I | GGNCC | 5 cut(s) | 392, 589, 717, 718, 1201 |
| CseI | GACGC | 1 cut(s) | 35 |
| Csp6I | GTAC | 4 cut(s) | 450, 538, 1000, 1227 |
| CviAII | CATG | 7 cut(s) | 491, 534, 555, 830, 980, 1011, 1254 |
| CviQI | GTAC | 4 cut(s) | 450, 538, 1000, 1227 |
| DdeI | CTNAG | 2 cut(s) | 212, 383 |
| DpnI | GATC | 7 cut(s) | 135, 264, 348, 753, 838, 1070, 1083 |
| DpnII | GATC | 7 cut(s) | 133, 262, 346, 751, 836, 1068, 1081 |
| DraI | TTTAAA | 1 cut(s) | 747 |
| EaeI | YGGCCR | 2 cut(s) | 33, 90 |
| EagI | CGGCCG | 1 cut(s) | 90 |
| EclXI | CGGCCG | 1 cut(s) | 90 |
| Eco130I | CCWWGG | 1 cut(s) | 495 |
| Eco24I | GRGCYC | 1 cut(s) | 721 |
| Eco31I | GGTCTC | 1 cut(s) | 764 |
| Eco32I | GATATC | 1 cut(s) | 698 |
| Eco47I | GGWCC | 2 cut(s) | 392, 589 |
| Eco52I | CGGCCG | 1 cut(s) | 90 |
| Eco57I | CTGAAG | 1 cut(s) | 339 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 386 |
| EcoO109I | RGGNCCY | 3 cut(s) | 717, 718, 1201 |
| EcoRI | GAATTC | 1 cut(s) | 529 |
| EcoRII | CCWGG | 1 cut(s) | 754 |
| EcoRV | GATATC | 1 cut(s) | 698 |
| EcoT14I | CCWWGG | 1 cut(s) | 495 |
| EcoT22I | ATGCAT | 1 cut(s) | 556 |
| EcoT38I | GRGCYC | 1 cut(s) | 721 |
| ErhI | CCWWGG | 1 cut(s) | 495 |
| FaeI | CATG | 7 cut(s) | 494, 537, 558, 833, 983, 1014, 1257 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 353, 385 |
| FaqI | GGGAC | 1 cut(s) | 602 |
| FatI | CATG | 7 cut(s) | 490, 533, 554, 829, 979, 1010, 1253 |
| Fnu4HI | GCNGC | 4 cut(s) | 42, 51, 738, 741 |
| FokI | GGATG | 5 cut(s) | 113, 168, 242, 536, 653 |
| FriOI | GRGCYC | 1 cut(s) | 721 |
| Fsp4HI | GCNGC | 4 cut(s) | 42, 51, 738, 741 |
| FspBI | CTAG | 2 cut(s) | 834, 950 |
| GluI | GCNGC | 4 cut(s) | 42, 51, 738, 741 |
| GsuI | CTGGAG | 2 cut(s) | 97, 600 |
| HaeIII | GGCC | 4 cut(s) | 35, 92, 719, 1202 |
| HapII | CCGG | 4 cut(s) | 89, 98, 185, 869 |
| HgaI | GACGC | 1 cut(s) | 35 |
| Hin1II | CATG | 7 cut(s) | 494, 537, 558, 833, 983, 1014, 1257 |
| HincII | GTYRAC | 1 cut(s) | 416 |
| HindII | GTYRAC | 1 cut(s) | 416 |
| HinfI | GANTC | 5 cut(s) | 128, 155, 289, 1016, 1064 |
| HpaII | CCGG | 4 cut(s) | 89, 98, 185, 869 |
| HphI | GGTGA | 1 cut(s) | 1205 |
| Hpy166II | GTNNAC | 4 cut(s) | 416, 691, 880, 1192 |
| Hpy188I | TCNGA | 5 cut(s) | 74, 133, 213, 925, 933 |
| Hpy188III | TCNNGA | 7 cut(s) | 114, 167, 512, 662, 701, 726, 800 |
| Hpy8I | GTNNAC | 4 cut(s) | 416, 691, 880, 1192 |
| Hpy99I | CGWCG | 1 cut(s) | 29 |
| HpyAV | CCTTC | 4 cut(s) | 334, 610, 806, 1070 |
| HpyCH4III | ACNGT | 5 cut(s) | 680, 688, 910, 999, 1182 |
| HpyCH4IV | ACGT | 2 cut(s) | 193, 987 |
| HpyCH4V | TGCA | 6 cut(s) | 302, 330, 554, 607, 652, 1241 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 41, 47, 50, 56, 194, 500 |
| HpyF3I | CTNAG | 2 cut(s) | 212, 383 |
| HpySE526I | ACGT | 2 cut(s) | 193, 987 |
| Hsp92II | CATG | 7 cut(s) | 494, 537, 558, 833, 983, 1014, 1257 |
| KpnI | GGTACC | 1 cut(s) | 453 |
| Kzo9I | GATC | 7 cut(s) | 133, 262, 346, 751, 836, 1068, 1081 |
| LmnI | GCTCC | 2 cut(s) | 581, 997 |
| Lsp1109I | GCAGC | 3 cut(s) | 37, 724, 727 |
| LweI | GCATC | 3 cut(s) | 295, 414, 869 |
| MaeI | CTAG | 2 cut(s) | 834, 950 |
| MaeII | ACGT | 2 cut(s) | 193, 987 |
| MaeIII | GTNAC | 3 cut(s) | 323, 505, 574 |
| MalI | GATC | 7 cut(s) | 135, 264, 348, 753, 838, 1070, 1083 |
| MboI | GATC | 7 cut(s) | 133, 262, 346, 751, 836, 1068, 1081 |
| MboII | GAAGA | 3 cut(s) | 32, 345, 349 |
| MflI | RGATCY | 3 cut(s) | 346, 751, 836 |
| MhlI | GDGCHC | 1 cut(s) | 721 |
| MlsI | TGGCCA | 1 cut(s) | 35 |
| MluCI | AATT | 3 cut(s) | 241, 529, 1233 |
| MluNI | TGGCCA | 1 cut(s) | 35 |
| Mox20I | TGGCCA | 1 cut(s) | 35 |
| Mph1103I | ATGCAT | 1 cut(s) | 556 |
| MroXI | GAANNNNTTC | 2 cut(s) | 483, 1104 |
| MscI | TGGCCA | 1 cut(s) | 35 |
| MseI | TTAA | 6 cut(s) | 119, 282, 675, 746, 821, 975 |
| Msp20I | TGGCCA | 1 cut(s) | 35 |
| MspI | CCGG | 4 cut(s) | 89, 98, 185, 869 |
| MspR9I | CCNGG | 2 cut(s) | 98, 756 |
| Mva1269I | GAATGC | 3 cut(s) | 483, 654, 1053 |
| MvaI | CCWGG | 1 cut(s) | 756 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 41, 47, 50, 56, 194, 500 |
| NciI | CCSGG | 1 cut(s) | 98 |
| NdeII | GATC | 7 cut(s) | 133, 262, 346, 751, 836, 1068, 1081 |
| NlaIII | CATG | 7 cut(s) | 494, 537, 558, 833, 983, 1014, 1257 |
| NlaIV | GGNNCC | 6 cut(s) | 393, 451, 590, 719, 753, 1101 |
| NmuCI | GTSAC | 1 cut(s) | 574 |
| NsiI | ATGCAT | 1 cut(s) | 556 |
| NspI | RCATGY | 4 cut(s) | 494, 558, 833, 1014 |
| PaeI | GCATGC | 2 cut(s) | 833, 1014 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 129 |
| PctI | GAATGC | 3 cut(s) | 483, 654, 1053 |
| PdmI | GAANNNNTTC | 2 cut(s) | 483, 1104 |
| PfeI | GAWTC | 5 cut(s) | 128, 155, 289, 1016, 1064 |
| PkrI | GCNGC | 4 cut(s) | 43, 52, 739, 742 |
| PshAI | GACNNNNGTC | 1 cut(s) | 850 |
| Psp1406I | AACGTT | 1 cut(s) | 987 |
| Psp6I | CCWGG | 1 cut(s) | 754 |
| PspGI | CCWGG | 1 cut(s) | 754 |
| PspN4I | GGNNCC | 6 cut(s) | 393, 451, 590, 719, 753, 1101 |
| PspOMI | GGGCCC | 1 cut(s) | 717 |
| PspPI | GGNCC | 5 cut(s) | 392, 589, 717, 718, 1201 |
| PsuI | RGATCY | 3 cut(s) | 346, 751, 836 |
| RsaI | GTAC | 4 cut(s) | 451, 539, 1001, 1228 |
| RsaNI | GTAC | 4 cut(s) | 450, 538, 1000, 1227 |
| SaqAI | TTAA | 6 cut(s) | 119, 282, 675, 746, 821, 975 |
| SatI | GCNGC | 4 cut(s) | 42, 51, 738, 741 |
| Sau3AI | GATC | 7 cut(s) | 133, 262, 346, 751, 836, 1068, 1081 |
| Sau96I | GGNCC | 5 cut(s) | 392, 589, 717, 718, 1201 |
| ScrFI | CCNGG | 2 cut(s) | 98, 756 |
| SduI | GDGCHC | 1 cut(s) | 721 |
| SfaNI | GCATC | 3 cut(s) | 295, 414, 869 |
| SfcI | CTRYAG | 2 cut(s) | 768, 909 |
| SinI | GGWCC | 2 cut(s) | 392, 589 |
| SmlI | CTYRAG | 2 cut(s) | 167, 444 |
| SmoI | CTYRAG | 2 cut(s) | 167, 444 |
| SpeI | ACTAGT | 1 cut(s) | 949 |
| SphI | GCATGC | 2 cut(s) | 833, 1014 |
| Sse9I | AATT | 3 cut(s) | 241, 529, 1233 |
| SsiI | CCGC | 1 cut(s) | 42 |
| SspMI | CTAG | 2 cut(s) | 834, 950 |
| StyD4I | CCNGG | 2 cut(s) | 96, 754 |
| StyI | CCWWGG | 1 cut(s) | 495 |
| TaaI | ACNGT | 5 cut(s) | 680, 688, 910, 999, 1182 |
| TaiI | ACGT | 2 cut(s) | 196, 990 |
| TaqI | TCGA | 4 cut(s) | 10, 153, 422, 1067 |
| TasI | AATT | 3 cut(s) | 241, 529, 1233 |
| TatI | WGTACW | 1 cut(s) | 999 |
| TauI | GCSGC | 1 cut(s) | 44 |
| TfiI | GAWTC | 5 cut(s) | 128, 155, 289, 1016, 1064 |
| Tru1I | TTAA | 6 cut(s) | 119, 282, 675, 746, 821, 975 |
| Tru9I | TTAA | 6 cut(s) | 119, 282, 675, 746, 821, 975 |
| TscAI | CASTG | 4 cut(s) | 21, 36, 691, 1002 |
| TseFI | GTSAC | 1 cut(s) | 574 |
| TseI | GCWGC | 3 cut(s) | 50, 737, 740 |
| Tsp45I | GTSAC | 1 cut(s) | 574 |
| TspDTI | ATGAA | 7 cut(s) | 219, 492, 522, 657, 726, 1097, 1162 |
| TspGWI | ACGGA | 2 cut(s) | 1209, 1214 |
| TspRI | CASTG | 4 cut(s) | 21, 36, 691, 1002 |
| VpaK11BI | GGWCC | 2 cut(s) | 392, 589 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 386 |
| XapI | RAATTY | 1 cut(s) | 529 |
| XceI | RCATGY | 4 cut(s) | 494, 558, 833, 1014 |
| XmnI | GAANNNNTTC | 2 cut(s) | 483, 1104 |
| XspI | CTAG | 2 cut(s) | 834, 950 |
| Zsp2I | ATGCAT | 1 cut(s) | 556 |