Rh5CG248100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
26089529 .. 26091886
2358 bp
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UTR
Exon/CDS
Intron
Rh5CG248100.1

Sequence Viewer

Length: 186 bp
ATGGATTTGGGGATTGGGGATTTCATAGAACTCGATTTAGGGAAGCTGAAGAATTTGAATGACTTCTACATGCTGACACATGCAAGAGCTTGGTGCACATCTTCTTTGCTCAATGTGGAACATCAAAGCCTCAAGAATCTGGACCAGCACCCTTTCTCTAACACACTTGTTGAGTCAAAGGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

61

Amino Acids

6.93

Weight (kDa)

5.35

Isoelectric Point (pI)

39.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 52
AcuI CTGAAG 1 cut(s) 68
AgsI TTSAA 1 cut(s) 58
AluBI AGCT 2 cut(s) 46, 89
AluI AGCT 2 cut(s) 46, 89
Alw21I GWGCWC 1 cut(s) 98
Alw44I GTGCAC 1 cut(s) 94
ApaLI GTGCAC 1 cut(s) 94
ApoI RAATTY 1 cut(s) 52
Asp700I GAANNNNTTC 1 cut(s) 62
AspS9I GGNCC 1 cut(s) 142
AvaII GGWCC 1 cut(s) 142
BaeGI GKGCMC 1 cut(s) 98
Bbv12I GWGCWC 1 cut(s) 98
Bme18I GGWCC 1 cut(s) 142
BmgT120I GGNCC 1 cut(s) 142
BpuEI CTTGAG 1 cut(s) 116
BseSI GKGCMC 1 cut(s) 98
BsiHKAI GWGCWC 1 cut(s) 98
Bsp1286I GDGCHC 1 cut(s) 98
BstNSI RCATGY 2 cut(s) 73, 83
BstSLI GKGCMC 1 cut(s) 98
Cfr13I GGNCC 1 cut(s) 142
CviAII CATG 2 cut(s) 70, 80
CviJI RGCY 3 cut(s) 46, 89, 129
CviKI_1 RGCY 3 cut(s) 46, 89, 129
Eco47I GGWCC 1 cut(s) 142
Eco57I CTGAAG 1 cut(s) 68
FaeI CATG 2 cut(s) 73, 83
FaiI YATR 4 cut(s) 26, 71, 81, 184
FatI CATG 2 cut(s) 69, 79
Hin1II CATG 2 cut(s) 73, 83
HinfI GANTC 2 cut(s) 136, 173
Hpy166II GTNNAC 1 cut(s) 96
Hpy188III TCNNGA 2 cut(s) 133, 140
Hpy8I GTNNAC 1 cut(s) 96
HpyCH4V TGCA 2 cut(s) 83, 96
Hsp92II CATG 2 cut(s) 73, 83
LpnPI CCDG 2 cut(s) 125, 158
MboII GAAGA 2 cut(s) 61, 93
MhlI GDGCHC 1 cut(s) 98
MluCI AATT 1 cut(s) 52
MlyI GAGTC 1 cut(s) 182
MnlI CCTC 1 cut(s) 140
MroXI GAANNNNTTC 1 cut(s) 62
NlaIII CATG 2 cut(s) 73, 83
NspI RCATGY 2 cut(s) 73, 83
PdmI GAANNNNTTC 1 cut(s) 62
PfeI GAWTC 1 cut(s) 136
PleI GAGTC 1 cut(s) 181
PpsI GAGTC 1 cut(s) 181
PspPI GGNCC 1 cut(s) 142
Sau96I GGNCC 1 cut(s) 142
SchI GAGTC 1 cut(s) 182
SduI GDGCHC 1 cut(s) 98
SetI ASST 2 cut(s) 48, 91
SgeI CNNG 9 cut(s) 44, 82, 92, 96, 102, 145, 152, 157, 179
SinI GGWCC 1 cut(s) 142
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
Sse9I AATT 1 cut(s) 52
TaqI TCGA 1 cut(s) 33
TasI AATT 1 cut(s) 52
TfiI GAWTC 1 cut(s) 136
TspDTI ATGAA 1 cut(s) 13
VneI GTGCAC 1 cut(s) 94
VpaK11BI GGWCC 1 cut(s) 142
XapI RAATTY 1 cut(s) 52
XceI RCATGY 2 cut(s) 73, 83
XmnI GAANNNNTTC 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.