Belongs to the disease resistance NB-LRR family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 860 |
| AatII | GACGTC | 1 cut(s) | 1156 |
| Acc36I | ACCTGC | 1 cut(s) | 860 |
| AccB1I | GGYRCC | 1 cut(s) | 517 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 88, 1036 |
| AccI | GTMKAC | 1 cut(s) | 102 |
| AccII | CGCG | 1 cut(s) | 78 |
| AciI | CCGC | 4 cut(s) | 134, 173, 362, 1060 |
| AclWI | GGATC | 2 cut(s) | 722, 1508 |
| AcoI | YGGCCR | 1 cut(s) | 243 |
| AcsI | RAATTY | 4 cut(s) | 60, 213, 429, 1423 |
| AcuI | CTGAAG | 1 cut(s) | 1340 |
| AcyI | GRCGYC | 1 cut(s) | 1153 |
| AfaI | GTAC | 2 cut(s) | 343, 477 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 88, 1036, 1695 |
| AflIII | ACRYGT | 3 cut(s) | 561, 635, 910 |
| AgeI | ACCGGT | 1 cut(s) | 1580 |
| AjnI | CCWGG | 2 cut(s) | 168, 829 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1211, 1243 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1425, 1457 |
| AluBI | AGCT | 8 cut(s) | 127, 153, 759, 886, 1318, 1438, 1537, 1732 |
| AluI | AGCT | 8 cut(s) | 127, 153, 759, 886, 1318, 1438, 1537, 1732 |
| Alw21I | GWGCWC | 1 cut(s) | 180 |
| Alw26I | GTCTC | 2 cut(s) | 1250, 1402 |
| Alw44I | GTGCAC | 1 cut(s) | 176 |
| AlwI | GGATC | 2 cut(s) | 722, 1508 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1183 |
| AoxI | GGCC | 1 cut(s) | 243 |
| ApaLI | GTGCAC | 1 cut(s) | 176 |
| ApeKI | GCWGC | 1 cut(s) | 26 |
| ApoI | RAATTY | 4 cut(s) | 60, 213, 429, 1423 |
| AseI | ATTAAT | 2 cut(s) | 446, 1800 |
| AsiGI | ACCGGT | 1 cut(s) | 1580 |
| AspS9I | GGNCC | 1 cut(s) | 672 |
| AsuHPI | GGTGA | 4 cut(s) | 228, 313, 1376, 1796 |
| AsuNHI | GCTAGC | 1 cut(s) | 202 |
| AvaII | GGWCC | 1 cut(s) | 672 |
| BaeGI | GKGCMC | 1 cut(s) | 180 |
| BalI | TGGCCA | 1 cut(s) | 245 |
| BanI | GGYRCC | 1 cut(s) | 517 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 459, 491 |
| BbsI | GAAGAC | 1 cut(s) | 403 |
| Bbv12I | GWGCWC | 1 cut(s) | 180 |
| BbvI | GCAGC | 1 cut(s) | 38 |
| BccI | CCATC | 4 cut(s) | 254, 614, 1217, 1457 |
| BciT130I | CCWGG | 2 cut(s) | 170, 831 |
| BclI | TGATCA | 1 cut(s) | 709 |
| BcoDI | GTCTC | 2 cut(s) | 1250, 1402 |
| BfaI | CTAG | 7 cut(s) | 203, 968, 1379, 1416, 1439, 1604, 1610 |
| BfmI | CTRYAG | 2 cut(s) | 890, 1088 |
| BfuAI | ACCTGC | 1 cut(s) | 860 |
| BglII | AGATCT | 1 cut(s) | 1667 |
| BisI | GCNGC | 1 cut(s) | 27 |
| BlsI | GCNGC | 1 cut(s) | 28 |
| Bme1390I | CCNGG | 2 cut(s) | 170, 831 |
| Bme18I | GGWCC | 1 cut(s) | 672 |
| BmgT120I | GGNCC | 1 cut(s) | 672 |
| BmiI | GGNNCC | 1 cut(s) | 519 |
| BmrFI | CCNGG | 2 cut(s) | 170, 831 |
| BmsI | GCATC | 2 cut(s) | 341, 1590 |
| BmtI | GCTAGC | 1 cut(s) | 206 |
| BpiI | GAAGAC | 1 cut(s) | 403 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1397, 1429 |
| BpmI | CTGGAG | 4 cut(s) | 834, 852, 1160, 1806 |
| BpuEI | CTTGAG | 3 cut(s) | 270, 994, 1424 |
| Bsa29I | ATCGAT | 1 cut(s) | 335 |
| BsaAI | YACGTR | 1 cut(s) | 564 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1345 |
| BsaHI | GRCGYC | 1 cut(s) | 1153 |
| BsaJI | CCNNGG | 2 cut(s) | 416, 1035 |
| BsaWI | WCCGGW | 1 cut(s) | 1580 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 88, 1036, 1695 |
| Bse118I | RCCGGY | 1 cut(s) | 1580 |
| Bse1I | ACTGG | 5 cut(s) | 35, 246, 1242, 1270, 1823 |
| Bse3DI | GCAATG | 2 cut(s) | 864, 1644 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1345 |
| BseBI | CCWGG | 2 cut(s) | 170, 831 |
| BseCI | ATCGAT | 1 cut(s) | 335 |
| BseDI | CCNNGG | 2 cut(s) | 416, 1035 |
| BseGI | GGATG | 4 cut(s) | 1045, 1228, 1605, 1627 |
| BseJI | GATNNNNATC | 1 cut(s) | 1345 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 88, 1036, 1695 |
| BseMI | GCAATG | 2 cut(s) | 864, 1644 |
| BseMII | CTCAG | 3 cut(s) | 774, 1261, 1663 |
| BseNI | ACTGG | 5 cut(s) | 35, 246, 1242, 1270, 1823 |
| BseRI | GAGGAG | 1 cut(s) | 454 |
| BseSI | GKGCMC | 1 cut(s) | 180 |
| BseXI | GCAGC | 1 cut(s) | 38 |
| Bsh1236I | CGCG | 1 cut(s) | 78 |
| Bsh1285I | CGRYCG | 1 cut(s) | 134 |
| BshFI | GGCC | 1 cut(s) | 245 |
| BshNI | GGYRCC | 1 cut(s) | 517 |
| BshTI | ACCGGT | 1 cut(s) | 1580 |
| BshVI | ATCGAT | 1 cut(s) | 335 |
| BsiEI | CGRYCG | 1 cut(s) | 134 |
| BsiHKAI | GWGCWC | 1 cut(s) | 180 |
| BsiSI | CCGG | 1 cut(s) | 1581 |
| BslFI | GGGAC | 2 cut(s) | 602, 1716 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 88, 1036, 1695 |
| BsmAI | GTCTC | 2 cut(s) | 1250, 1402 |
| BsmFI | GGGAC | 2 cut(s) | 602, 1716 |
| BsmI | GAATGC | 2 cut(s) | 1265, 1690 |
| BsnI | GGCC | 1 cut(s) | 245 |
| Bsp1286I | GDGCHC | 1 cut(s) | 180 |
| BspACI | CCGC | 4 cut(s) | 134, 173, 362, 1060 |
| BspANI | GGCC | 1 cut(s) | 245 |
| BspCNI | CTCAG | 3 cut(s) | 773, 1260, 1662 |
| BspDI | ATCGAT | 1 cut(s) | 335 |
| BspFNI | CGCG | 1 cut(s) | 78 |
| BspLI | GGNNCC | 1 cut(s) | 519 |
| BspMI | ACCTGC | 1 cut(s) | 860 |
| BspOI | GCTAGC | 1 cut(s) | 206 |
| BspPI | GGATC | 2 cut(s) | 722, 1508 |
| BspT107I | GGYRCC | 1 cut(s) | 517 |
| BsrDI | GCAATG | 2 cut(s) | 864, 1644 |
| BsrFI | RCCGGY | 1 cut(s) | 1580 |
| BsrI | ACTGG | 5 cut(s) | 35, 246, 1242, 1270, 1823 |
| BssAI | RCCGGY | 1 cut(s) | 1580 |
| BssECI | CCNNGG | 2 cut(s) | 416, 1035 |
| BssNI | GRCGYC | 1 cut(s) | 1153 |
| BssT1I | CCWWGG | 2 cut(s) | 416, 1035 |
| Bst2UI | CCWGG | 2 cut(s) | 170, 831 |
| Bst4CI | ACNGT | 2 cut(s) | 722, 1185 |
| Bst6I | CTCTTC | 1 cut(s) | 141 |
| BstACI | GRCGYC | 1 cut(s) | 1153 |
| BstBAI | YACGTR | 1 cut(s) | 564 |
| BstC8I | GCNNGC | 3 cut(s) | 155, 204, 644 |
| BstDEI | CTNAG | 5 cut(s) | 760, 1127, 1247, 1467, 1649 |
| BstF5I | GGATG | 4 cut(s) | 1045, 1228, 1605, 1627 |
| BstFNI | CGCG | 1 cut(s) | 78 |
| BstMAI | GTCTC | 2 cut(s) | 1250, 1402 |
| BstMCI | CGRYCG | 1 cut(s) | 134 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 133 |
| BstNI | CCWGG | 2 cut(s) | 170, 831 |
| BstNSI | RCATGY | 1 cut(s) | 639 |
| BstSCI | CCNGG | 2 cut(s) | 168, 829 |
| BstSFI | CTRYAG | 2 cut(s) | 890, 1088 |
| BstSLI | GKGCMC | 1 cut(s) | 180 |
| BstUI | CGCG | 1 cut(s) | 78 |
| BstV1I | GCAGC | 1 cut(s) | 38 |
| BstV2I | GAAGAC | 1 cut(s) | 403 |
| BstX2I | RGATCY | 2 cut(s) | 1513, 1667 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1830 |
| BstYI | RGATCY | 2 cut(s) | 1513, 1667 |
| Bsu15I | ATCGAT | 1 cut(s) | 335 |
| BsuRI | GGCC | 1 cut(s) | 245 |
| BsuTUI | ATCGAT | 1 cut(s) | 335 |
| BtsCI | GGATG | 4 cut(s) | 1045, 1228, 1605, 1627 |
| BtsIMutI | CAGTG | 4 cut(s) | 239, 1181, 1476, 1719 |
| BveI | ACCTGC | 1 cut(s) | 860 |
| Cac8I | GCNNGC | 3 cut(s) | 155, 204, 644 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1183 |
| Cfr10I | RCCGGY | 1 cut(s) | 1580 |
| Cfr13I | GGNCC | 1 cut(s) | 672 |
| ClaI | ATCGAT | 1 cut(s) | 335 |
| Csp6I | GTAC | 2 cut(s) | 342, 476 |
| CspAI | ACCGGT | 1 cut(s) | 1580 |
| CviAII | CATG | 2 cut(s) | 636, 1373 |
| CviQI | GTAC | 2 cut(s) | 342, 476 |
| DdeI | CTNAG | 5 cut(s) | 760, 1127, 1247, 1467, 1649 |
| EaeI | YGGCCR | 1 cut(s) | 243 |
| Eam1104I | CTCTTC | 1 cut(s) | 141 |
| EarI | CTCTTC | 1 cut(s) | 141 |
| Eco130I | CCWWGG | 2 cut(s) | 416, 1035 |
| Eco47I | GGWCC | 1 cut(s) | 672 |
| Eco57I | CTGAAG | 1 cut(s) | 1340 |
| EcoRI | GAATTC | 1 cut(s) | 60 |
| EcoRII | CCWGG | 2 cut(s) | 168, 829 |
| EcoT14I | CCWWGG | 2 cut(s) | 416, 1035 |
| ErhI | CCWWGG | 2 cut(s) | 416, 1035 |
| FaeI | CATG | 2 cut(s) | 639, 1376 |
| FaqI | GGGAC | 2 cut(s) | 602, 1716 |
| FatI | CATG | 2 cut(s) | 635, 1372 |
| FauNDI | CATATG | 3 cut(s) | 251, 1054, 1079 |
| FbaI | TGATCA | 1 cut(s) | 709 |
| FblI | GTMKAC | 1 cut(s) | 102 |
| Fnu4HI | GCNGC | 1 cut(s) | 27 |
| FokI | GGATG | 4 cut(s) | 1052, 1235, 1612, 1634 |
| Fsp4HI | GCNGC | 1 cut(s) | 27 |
| FspBI | CTAG | 7 cut(s) | 203, 968, 1379, 1416, 1439, 1604, 1610 |
| GluI | GCNGC | 1 cut(s) | 27 |
| GsuI | CTGGAG | 4 cut(s) | 834, 852, 1160, 1806 |
| HaeIII | GGCC | 1 cut(s) | 245 |
| HapII | CCGG | 1 cut(s) | 1581 |
| Hin1I | GRCGYC | 1 cut(s) | 1153 |
| Hin1II | CATG | 2 cut(s) | 639, 1376 |
| HincII | GTYRAC | 2 cut(s) | 103, 1145 |
| HindII | GTYRAC | 2 cut(s) | 103, 1145 |
| HinfI | GANTC | 9 cut(s) | 304, 337, 627, 773, 809, 992, 1309, 1388, 1410 |
| HpaII | CCGG | 1 cut(s) | 1581 |
| HphI | GGTGA | 4 cut(s) | 228, 313, 1376, 1796 |
| Hpy166II | GTNNAC | 9 cut(s) | 103, 178, 236, 478, 981, 1133, 1145, 1239, 1367 |
| Hpy188I | TCNGA | 6 cut(s) | 21, 574, 696, 763, 920, 1250 |
| Hpy188III | TCNNGA | 9 cut(s) | 287, 587, 631, 770, 813, 899, 905, 1177, 1508 |
| Hpy8I | GTNNAC | 9 cut(s) | 103, 178, 236, 478, 981, 1133, 1145, 1239, 1367 |
| Hpy99I | CGWCG | 1 cut(s) | 1158 |
| HpyAV | CCTTC | 7 cut(s) | 384, 461, 812, 1213, 1273, 1337, 1742 |
| HpyCH4III | ACNGT | 2 cut(s) | 722, 1185 |
| HpyCH4IV | ACGT | 4 cut(s) | 563, 686, 910, 1153 |
| HpyCH4V | TGCA | 6 cut(s) | 178, 464, 646, 869, 1642, 1674 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 133 |
| HpyF3I | CTNAG | 5 cut(s) | 760, 1127, 1247, 1467, 1649 |
| HpySE526I | ACGT | 4 cut(s) | 563, 686, 910, 1153 |
| Hsp92I | GRCGYC | 1 cut(s) | 1153 |
| Hsp92II | CATG | 2 cut(s) | 639, 1376 |
| Ksp22I | TGATCA | 1 cut(s) | 709 |
| LmnI | GCTCC | 2 cut(s) | 54, 1542 |
| Lsp1109I | GCAGC | 1 cut(s) | 38 |
| LweI | GCATC | 2 cut(s) | 341, 1590 |
| MaeI | CTAG | 7 cut(s) | 203, 968, 1379, 1416, 1439, 1604, 1610 |
| MaeII | ACGT | 4 cut(s) | 563, 686, 910, 1153 |
| MaeIII | GTNAC | 6 cut(s) | 37, 369, 752, 1583, 1756, 1836 |
| MfeI | CAATTG | 2 cut(s) | 1350, 1828 |
| MflI | RGATCY | 2 cut(s) | 1513, 1667 |
| MhlI | GDGCHC | 1 cut(s) | 180 |
| MlsI | TGGCCA | 1 cut(s) | 245 |
| MluNI | TGGCCA | 1 cut(s) | 245 |
| MlyI | GAGTC | 3 cut(s) | 636, 767, 1404 |
| MmeI | TCCRAC | 3 cut(s) | 1365, 1593, 1638 |
| Mox20I | TGGCCA | 1 cut(s) | 245 |
| MscI | TGGCCA | 1 cut(s) | 245 |
| MseI | TTAA | 8 cut(s) | 446, 578, 716, 950, 1337, 1548, 1709, 1800 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1053 |
| Msp20I | TGGCCA | 1 cut(s) | 245 |
| MspI | CCGG | 1 cut(s) | 1581 |
| MspR9I | CCNGG | 2 cut(s) | 170, 831 |
| MunI | CAATTG | 2 cut(s) | 1350, 1828 |
| Mva1269I | GAATGC | 2 cut(s) | 1265, 1690 |
| MvaI | CCWGG | 2 cut(s) | 170, 831 |
| MvnI | CGCG | 1 cut(s) | 78 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 133 |
| NdeI | CATATG | 3 cut(s) | 251, 1054, 1079 |
| NheI | GCTAGC | 1 cut(s) | 202 |
| NlaIII | CATG | 2 cut(s) | 639, 1376 |
| NlaIV | GGNNCC | 1 cut(s) | 519 |
| NmuCI | GTSAC | 2 cut(s) | 752, 1836 |
| NspI | RCATGY | 1 cut(s) | 639 |
| PaqCI | CACCTGC | 1 cut(s) | 860 |
| PciI | ACATGT | 1 cut(s) | 635 |
| PctI | GAATGC | 2 cut(s) | 1265, 1690 |
| PfeI | GAWTC | 6 cut(s) | 304, 337, 809, 992, 1309, 1388 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 88, 1036 |
| PinAI | ACCGGT | 1 cut(s) | 1580 |
| PkrI | GCNGC | 1 cut(s) | 28 |
| PleI | GAGTC | 3 cut(s) | 635, 767, 1404 |
| PpsI | GAGTC | 3 cut(s) | 635, 767, 1404 |
| Ppu21I | YACGTR | 1 cut(s) | 564 |
| PscI | ACATGT | 1 cut(s) | 635 |
| PshBI | ATTAAT | 2 cut(s) | 446, 1800 |
| Psp6I | CCWGG | 2 cut(s) | 168, 829 |
| PspGI | CCWGG | 2 cut(s) | 168, 829 |
| PspN4I | GGNNCC | 1 cut(s) | 519 |
| PspPI | GGNCC | 1 cut(s) | 672 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1183 |
| PsuI | RGATCY | 2 cut(s) | 1513, 1667 |
| RsaI | GTAC | 2 cut(s) | 343, 477 |
| RsaNI | GTAC | 2 cut(s) | 342, 476 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1053 |
| SalI | GTCGAC | 1 cut(s) | 101 |
| SaqAI | TTAA | 8 cut(s) | 446, 578, 716, 950, 1337, 1548, 1709, 1800 |
| SatI | GCNGC | 1 cut(s) | 27 |
| Sau96I | GGNCC | 1 cut(s) | 672 |
| SchI | GAGTC | 3 cut(s) | 636, 767, 1404 |
| ScrFI | CCNGG | 2 cut(s) | 170, 831 |
| SduI | GDGCHC | 1 cut(s) | 180 |
| SfaNI | GCATC | 2 cut(s) | 341, 1590 |
| SfcI | CTRYAG | 2 cut(s) | 890, 1088 |
| SinI | GGWCC | 1 cut(s) | 672 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1053 |
| SmlI | CTYRAG | 3 cut(s) | 285, 973, 1403 |
| SmoI | CTYRAG | 3 cut(s) | 285, 973, 1403 |
| SsiI | CCGC | 4 cut(s) | 134, 173, 362, 1060 |
| SspMI | CTAG | 7 cut(s) | 203, 968, 1379, 1416, 1439, 1604, 1610 |
| StyD4I | CCNGG | 2 cut(s) | 168, 829 |
| StyI | CCWWGG | 2 cut(s) | 416, 1035 |
| TaaI | ACNGT | 2 cut(s) | 722, 1185 |
| TaiI | ACGT | 4 cut(s) | 566, 689, 913, 1156 |
| TaqI | TCGA | 4 cut(s) | 102, 130, 335, 1099 |
| TfiI | GAWTC | 6 cut(s) | 304, 337, 809, 992, 1309, 1388 |
| Tru1I | TTAA | 8 cut(s) | 446, 578, 716, 950, 1337, 1548, 1709, 1800 |
| Tru9I | TTAA | 8 cut(s) | 446, 578, 716, 950, 1337, 1548, 1709, 1800 |
| TscAI | CASTG | 4 cut(s) | 246, 1188, 1483, 1726 |
| TseFI | GTSAC | 2 cut(s) | 752, 1836 |
| TseI | GCWGC | 1 cut(s) | 26 |
| Tsp45I | GTSAC | 2 cut(s) | 752, 1836 |
| TspDTI | ATGAA | 4 cut(s) | 522, 561, 737, 1371 |
| TspRI | CASTG | 4 cut(s) | 246, 1188, 1483, 1726 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 88, 1036 |
| VneI | GTGCAC | 1 cut(s) | 176 |
| VpaK11BI | GGWCC | 1 cut(s) | 672 |
| VspI | ATTAAT | 2 cut(s) | 446, 1800 |
| XapI | RAATTY | 4 cut(s) | 60, 213, 429, 1423 |
| XceI | RCATGY | 1 cut(s) | 639 |
| XmiI | GTMKAC | 1 cut(s) | 102 |
| XspI | CTAG | 7 cut(s) | 203, 968, 1379, 1416, 1439, 1604, 1610 |
| ZraI | GACGTC | 1 cut(s) | 1154 |