Rroxscaffold_152G00434570

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000152
Physical Location & Seq
Reverse (-)
84263 .. 86048
1786 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_152G00434570.1

Sequence Viewer

Length: 1704 bp
ATGGCCATTGCAATTATCATCGATTTTATCTATGGTCTTGTTCTTATTTACTTACTTTACATGGTCGCAAGTGAATTTGCTTTCAGATTCTCCAAGAGAAAGTATAAGTTGATTAAAAGAGAATGGAGATTACTGGGTGCTCTATTAGAGGATTTTGATGAAGTTACAAGATCTGGGATTCAAATTACCCAGAAAGCCAGTACACTCTTGGATTCAGGACCTGTCCAAGCTGGATTAACTATACAACTGAATGATAAGGAAATCGGCTGGATAACGAATGCAAGAAAAGTGGTTACTTGTGTTCAAAGCTTTCAGAGATTGAGAAAGAGAAGACAATATCCAATGCTGTTTTTCTTCGTCTTGGTTGATCTGGTACAGATGATTGGTGTTGCCTTTGGGATGCAATGGCTCACTGATGTCCTGGGAGAGATATTATGTGCCGACATCTGTAGATCACTGGAGCAGACAAGTTCCAAAGTTCGAAGTCTGCAGGACAGATCTTATGTTGATGAACTTGAATGTATATCTGTCAATTCTGAGCCACCAACAGCCCAACTTGGCTTGAGAATTGGTCCTGAGTTGATCATTTCCTCTGTCAGAACCTCTGTCACTGAAAAACCAGAAGTTAAATCCTTCATAATGCATTTGCAGCTACCGCAGGCTTTCATGAAAGATTCGCGAAGGCTCAAAGTACTGGAAAGTAAGAGGGAGGAGTCCTGGGTGATAGCAGCAAACAAGACCCTTGAAAAGGCAAAGGGTGCCATTAAAATCATTAAAAAAGCAGCAGCAAATCAACGAAGAAGTTGGCTTTCAGATGGCAGAAATTGGAGGGCTGGGAGGAAGCTTAAGGGGCACATAATCAATCAATATCAGATCACAGATGATAAGGATCTCTCTGATTTAAACAACATTCGGAACCGGCTCATTCAACTGCCAAAAACAAGCAATAAGGTGGTATCCCATGTCAGCTCGTTAAGCAAGGAGCTGGAGCACATGCATAAGCTGTTGGAAGATACAAAAGCAACTGAATATGCCGGTAATTTTAGAAATTCTTGCTTGGAGCAATTGAAGAAAATGGTTTTTGAAGCAGAGCGGTACTCAATAACCCACATGGAGGACTCTGACTCAGAGTGTATGTCTGAGATTCAACGAATCACAGATGCTGTCATTCTTTTTCAACAATGTGTGAAAGTATACTCCATTGAGGTCAGGAAGGAGTCATGCTCGGTCGTTGGGTTTGACGAAGACATATATAAACTGGTCCAGCAATTGACAGCTAACAGTGAATTGCATATCATTTCTGTTGGGGGAATGAAGGGCATTGGTAAGACAACTCTGGCGAAGAAAGTTTATCACCATGGTACCATTGCAAGCCATTTTAAAGTCCGACGATGGGTATCTGTACCTCACATGCATAATGAAAATGCACTTTTGAGAAGTGTTGGAAGCCAGATTGTGAAGAGCGAAGAGAAATGGAGTGCAAAAGATTTCTGGATCAAGAACGTGCGTGATTTCTTGAAGGAGAAGCGATACCTTTTAGTTTTGGACAATGTCCCATCAAAGGAAGTCTTGGATTCTCTTAAAGCAGCATTATTTCCAAAAATGATGAATGGGAGTAAGGTTGTGCTAACCACAAACAGCAAGGCCCTGGCTTTACATGTTGATACTGACCAAAGTAGTACTCAATATCCAATTCGGCTATGA

Protein Analysis

567

Amino Acids

64.84

Weight (kDa)

9.42

Isoelectric Point (pI)

47.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 415 - 556 1.8e-27 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000657)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g34770
malus_domestica MD17G1025700.v1.1
prunus_persica Prupe.3G040600_v2.0.a1 Prupe.3G040800_v2.0.a1 Prupe.3G041000_v2.0.a1 Prupe.3G041100_v2.0.a1 Prupe.3G041500_v2.0.a1 Prupe.4G109400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037700_v2.0.a1
pyrus_communis pycom09g10040 pycom17g16000
rosa_chinensis RchiOBHm_Chr2g0145591 RchiOBHm_Chr2g0145611
rosa_laevigata RLG00000020146 RLG00000020149 RLG00000020151 RLG00000020154
rosa_multiflora Rmu_co7986250.1_g000001 Rmu_co8305779.1_g000001 Rmu_sc0002718.1_g000011 Rmu_sc0002835.1_g000009 Rmu_sc0002835.1_g000016 Rmu_sc0003046.1_g000007 Rmu_sc0003046.1_g000010 Rmu_sc0004445.1_g000006 Rmu_sc0004810.1_g000002 Rmu_sc0006477.1_g000008 Rmu_sc0014329.1_g000001 Rmu_sc0020976.1_g000003 Rmu_sc0021168.1_g000001 Rmu_sc0022199.1_g000001 Rmu_sc0036991.1_g000001 Rmu_sc0041497.1_g000003
rosa_roxburghii Rroxscaffold_152G00434560 Rroxscaffold_152G00434570 Rroxscaffold_152G00434600 Rroxscaffold_152G00434610 Rroxscaffold_2G00100630 Rroxscaffold_2G00100640 Rroxscaffold_2G00100660 Rroxscaffold_2G00100670 Rroxscaffold_2G00100680 Rroxscaffold_2G00100690
rosa_rugosa Rorug02G0392300 Rorug02G0392400 Rorug02G0392400
rosa_samantha Rh2AG445700 Rh2AG445800 Rh2AG446000 Rh2AG446100 Rh2AG446300 Rh2AG446600 Rh2BG457400 Rh2BG457500 Rh2BG457600 Rh2BG457900 Rh2BG458300 Rh2CG432300 Rh2CG432400 Rh2CG432500 Rh2CG432700 Rh2CG432900 Rh2CG433000 Rh2CG433300 Rh2DG467100 Rh2DG467200 Rh2DG467300 Rh2DG467600 Rh2DG467900 Rh3DG194100
rosa_wichuraiana Rw2G036420 Rw2G036450 Rw2G036470 Rw3G014900 Rw3G014920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1361
AccB1I GGYRCC 2 cut(s) 758, 1361
AccBSI CCGCTC 1 cut(s) 1093
AccI GTMKAC 1 cut(s) 1194
AccII CGCG 1 cut(s) 679
AciI CCGC 2 cut(s) 656, 1093
AclWI GGATC 2 cut(s) 897, 1502
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 74, 1048
AfaI GTAC 7 cut(s) 202, 375, 693, 1097, 1363, 1404, 1681
AfiI CCNNNNNNNGG 4 cut(s) 748, 1114, 1393, 1561
AflII CTTAAG 1 cut(s) 845
AflIII ACRYGT 1 cut(s) 1657
AjnI CCWGG 3 cut(s) 420, 716, 1647
AluBI AGCT 8 cut(s) 230, 309, 652, 844, 969, 985, 1003, 1277
AluI AGCT 8 cut(s) 230, 309, 652, 844, 969, 985, 1003, 1277
Alw21I GWGCWC 2 cut(s) 142, 993
AlwI GGATC 2 cut(s) 897, 1502
AlwNI CAGNNNCTG 2 cut(s) 221, 1163
AoxI GGCC 2 cut(s) 3, 1644
ApeKI GCWGC 5 cut(s) 649, 728, 782, 785, 1586
ApoI RAATTY 2 cut(s) 74, 1048
Asp718I GGTACC 1 cut(s) 1361
AspS9I GGNCC 4 cut(s) 218, 572, 1261, 1645
AsuHPI GGTGA 2 cut(s) 733, 1346
AsuII TTCGAA 1 cut(s) 481
AvaII GGWCC 3 cut(s) 218, 572, 1261
BaeGI GKGCMC 1 cut(s) 855
BaeI ACNNNNGTAYC 2 cut(s) 1345, 1378
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 758, 1361
BbsI GAAGAC 2 cut(s) 337, 1251
Bbv12I GWGCWC 2 cut(s) 142, 993
BbvI GCAGC 5 cut(s) 661, 740, 794, 797, 1598
BccI CCATC 3 cut(s) 809, 1386, 1564
BciT130I CCWGG 3 cut(s) 422, 718, 1649
BciVI GTATCC 1 cut(s) 967
BclI TGATCA 1 cut(s) 582
BfmI CTRYAG 2 cut(s) 448, 488
BfrI CTTAAG 1 cut(s) 845
BfuI GTATCC 1 cut(s) 967
BglII AGATCT 2 cut(s) 170, 497
BisI GCNGC 5 cut(s) 650, 729, 783, 786, 1587
BlsI GCNGC 5 cut(s) 651, 730, 784, 787, 1588
BmcAI AGTACT 2 cut(s) 693, 1681
Bme1390I CCNGG 3 cut(s) 422, 718, 1649
Bme18I GGWCC 3 cut(s) 218, 572, 1261
BmgT120I GGNCC 4 cut(s) 218, 572, 1261, 1645
BmiI GGNNCC 3 cut(s) 760, 917, 1363
BmrFI CCNGG 3 cut(s) 422, 718, 1649
BmrI ACTGGG 1 cut(s) 143
BmsI GCATC 2 cut(s) 390, 1150
BmuI ACTGGG 1 cut(s) 143
BpiI GAAGAC 2 cut(s) 337, 1251
BplI GAGNNNNNCTC 4 cut(s) 1082, 1114, 1208, 1240
BpmI CTGGAG 2 cut(s) 479, 1007
Bpu14I TTCGAA 1 cut(s) 481
BpuEI CTTGAG 1 cut(s) 583
Bsa29I ATCGAT 1 cut(s) 21
BsaBI GATNNNNATC 2 cut(s) 888, 1396
BsaJI CCNNGG 4 cut(s) 421, 717, 1357, 1647
Bsc4I CCNNNNNNNGG 4 cut(s) 748, 1114, 1393, 1561
Bse118I RCCGGY 2 cut(s) 918, 1034
Bse1I ACTGG 5 cut(s) 138, 198, 462, 699, 1263
Bse3DI GCAATG 3 cut(s) 6, 410, 1365
Bse8I GATNNNNATC 2 cut(s) 888, 1396
BseBI CCWGG 3 cut(s) 422, 718, 1649
BseCI ATCGAT 1 cut(s) 21
BseDI CCNNGG 4 cut(s) 421, 717, 1357, 1647
BseGI GGATG 1 cut(s) 405
BseJI GATNNNNATC 2 cut(s) 888, 1396
BseLI CCNNNNNNNGG 4 cut(s) 748, 1114, 1393, 1561
BseMI GCAATG 3 cut(s) 6, 410, 1365
BseMII CTCAG 4 cut(s) 528, 567, 1131, 1140
BseNI ACTGG 5 cut(s) 138, 198, 462, 699, 1263
BseRI GAGGAG 1 cut(s) 725
BseSI GKGCMC 1 cut(s) 855
BseXI GCAGC 5 cut(s) 661, 740, 794, 797, 1598
BseYI CCCAGC 1 cut(s) 833
Bsh1236I CGCG 1 cut(s) 679
Bsh1285I CGRYCG 1 cut(s) 1230
BshFI GGCC 2 cut(s) 5, 1646
BshNI GGYRCC 2 cut(s) 758, 1361
BshVI ATCGAT 1 cut(s) 21
BsiEI CGRYCG 1 cut(s) 1230
BsiHKAI GWGCWC 2 cut(s) 142, 993
BsiSI CCGG 2 cut(s) 919, 1035
BslFI GGGAC 1 cut(s) 1538
BslI CCNNNNNNNGG 4 cut(s) 748, 1114, 1393, 1561
BsmFI GGGAC 1 cut(s) 1538
BsmI GAATGC 1 cut(s) 283
BsnI GGCC 2 cut(s) 5, 1646
Bsp119I TTCGAA 1 cut(s) 481
Bsp1286I GDGCHC 3 cut(s) 142, 855, 993
Bsp143I GATC 8 cut(s) 170, 367, 452, 497, 582, 873, 889, 1494
Bsp19I CCATGG 1 cut(s) 1357
Bsp68I TCGCGA 1 cut(s) 679
BspACI CCGC 2 cut(s) 656, 1093
BspANI GGCC 2 cut(s) 5, 1646
BspCNI CTCAG 4 cut(s) 529, 568, 1132, 1139
BspDI ATCGAT 1 cut(s) 21
BspFNI CGCG 1 cut(s) 679
BspHI TCATGA 1 cut(s) 666
BspLI GGNNCC 3 cut(s) 760, 917, 1363
BspMAI CTGCAG 1 cut(s) 492
BspPI GGATC 2 cut(s) 897, 1502
BspQI GCTCTTC 1 cut(s) 1454
BspT104I TTCGAA 1 cut(s) 481
BspT107I GGYRCC 2 cut(s) 758, 1361
BspTI CTTAAG 1 cut(s) 845
BsrBI CCGCTC 1 cut(s) 1093
BsrDI GCAATG 3 cut(s) 6, 410, 1365
BsrFI RCCGGY 2 cut(s) 918, 1034
BsrI ACTGG 5 cut(s) 138, 198, 462, 699, 1263
BssAI RCCGGY 2 cut(s) 918, 1034
BssECI CCNNGG 4 cut(s) 421, 717, 1357, 1647
BssMI GATC 8 cut(s) 170, 367, 452, 497, 582, 873, 889, 1494
BssNAI GTATAC 1 cut(s) 1195
BssT1I CCWWGG 1 cut(s) 1357
Bst1107I GTATAC 1 cut(s) 1195
Bst2UI CCWGG 3 cut(s) 422, 718, 1649
Bst4CI ACNGT 1 cut(s) 1283
Bst6I CTCTTC 2 cut(s) 1454, 1461
BstAFI CTTAAG 1 cut(s) 845
BstAPI GCANNNNNTGC 1 cut(s) 758
BstBI TTCGAA 1 cut(s) 481
BstC8I GCNNGC 2 cut(s) 660, 1372
BstDEI CTNAG 4 cut(s) 537, 576, 1126, 1140
BstDSI CCRYGG 1 cut(s) 1357
BstENI CCTNNNNNAGG 1 cut(s) 746
BstF5I GGATG 1 cut(s) 405
BstFNI CGCG 1 cut(s) 679
BstKTI GATC 8 cut(s) 173, 370, 455, 500, 585, 876, 892, 1497
BstMBI GATC 8 cut(s) 170, 367, 452, 497, 582, 873, 889, 1494
BstMCI CGRYCG 1 cut(s) 1230
BstMWI GCNNNNNNNGC 5 cut(s) 649, 655, 758, 850, 975
BstNI CCWGG 3 cut(s) 422, 718, 1649
BstNSI RCATGY 3 cut(s) 997, 1414, 1661
BstSCI CCNGG 3 cut(s) 420, 716, 1647
BstSFI CTRYAG 2 cut(s) 448, 488
BstSLI GKGCMC 1 cut(s) 855
BstUI CGCG 1 cut(s) 679
BstV1I GCAGC 5 cut(s) 661, 740, 794, 797, 1598
BstV2I GAAGAC 2 cut(s) 337, 1251
BstX2I RGATCY 3 cut(s) 170, 497, 889
BstYI RGATCY 3 cut(s) 170, 497, 889
BstZ17I GTATAC 1 cut(s) 1195
Bsu15I ATCGAT 1 cut(s) 21
BsuI GTATCC 1 cut(s) 967
BsuRI GGCC 2 cut(s) 5, 1646
BsuTUI ATCGAT 1 cut(s) 21
BtgI CCRYGG 1 cut(s) 1357
BtsCI GGATG 1 cut(s) 405
BtsIMutI CAGTG 4 cut(s) 411, 455, 609, 1288
BtuMI TCGCGA 1 cut(s) 679
Cac8I GCNNGC 2 cut(s) 660, 1372
CaiI CAGNNNCTG 2 cut(s) 221, 1163
CciI TCATGA 1 cut(s) 666
Cfr10I RCCGGY 2 cut(s) 918, 1034
Cfr13I GGNCC 4 cut(s) 218, 572, 1261, 1645
ClaI ATCGAT 1 cut(s) 21
Csp6I GTAC 7 cut(s) 201, 374, 692, 1096, 1362, 1403, 1680
CspCI CAANNNNNGTGG 2 cut(s) 270, 305
CviAII CATG 9 cut(s) 61, 667, 962, 994, 1111, 1221, 1358, 1411, 1658
CviQI GTAC 7 cut(s) 201, 374, 692, 1096, 1362, 1403, 1680
DdeI CTNAG 4 cut(s) 537, 576, 1126, 1140
DpnI GATC 8 cut(s) 172, 369, 454, 499, 584, 875, 891, 1496
DpnII GATC 8 cut(s) 170, 367, 452, 497, 582, 873, 889, 1494
DraI TTTAAA 2 cut(s) 903, 1381
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 1454, 1461
EarI CTCTTC 2 cut(s) 1454, 1461
Eco130I CCWWGG 1 cut(s) 1357
Eco47I GGWCC 3 cut(s) 218, 572, 1261
EcoNI CCTNNNNNAGG 1 cut(s) 746
EcoO109I RGGNCCY 2 cut(s) 218, 1645
EcoRII CCWGG 3 cut(s) 420, 716, 1647
EcoT14I CCWWGG 1 cut(s) 1357
EcoT22I ATGCAT 3 cut(s) 645, 999, 1416
ErhI CCWWGG 1 cut(s) 1357
FaeI CATG 9 cut(s) 64, 670, 965, 997, 1114, 1224, 1361, 1414, 1661
FalI AAGNNNNNCTT 2 cut(s) 1553, 1585
FaqI GGGAC 1 cut(s) 1538
FatI CATG 9 cut(s) 60, 666, 961, 993, 1110, 1220, 1357, 1410, 1657
FbaI TGATCA 1 cut(s) 582
FblI GTMKAC 1 cut(s) 1194
Fnu4HI GCNGC 5 cut(s) 650, 729, 783, 786, 1587
FokI GGATG 1 cut(s) 412
Fsp4HI GCNGC 5 cut(s) 650, 729, 783, 786, 1587
GluI GCNGC 5 cut(s) 650, 729, 783, 786, 1587
GsaI CCCAGC 1 cut(s) 837
GsuI CTGGAG 2 cut(s) 479, 1007
HaeIII GGCC 2 cut(s) 5, 1646
HapII CCGG 2 cut(s) 919, 1035
Hin1II CATG 9 cut(s) 64, 670, 965, 997, 1114, 1224, 1361, 1414, 1661
HindIII AAGCTT 2 cut(s) 307, 842
HpaII CCGG 2 cut(s) 919, 1035
HphI GGTGA 2 cut(s) 733, 1346
Hpy166II GTNNAC 2 cut(s) 203, 1195
Hpy188III TCNNGA 8 cut(s) 216, 575, 667, 678, 1210, 1492, 1498, 1516
Hpy8I GTNNAC 2 cut(s) 203, 1195
Hpy99I CGWCG 1 cut(s) 1392
HpyAV CCTTC 5 cut(s) 643, 675, 1207, 1309, 1513
HpyCH4III ACNGT 1 cut(s) 1283
HpyCH4IV ACGT 1 cut(s) 1503
HpyF10VI GCNNNNNNNGC 5 cut(s) 649, 655, 758, 850, 975
HpyF3I CTNAG 4 cut(s) 537, 576, 1126, 1140
HpySE526I ACGT 1 cut(s) 1503
Hsp92II CATG 9 cut(s) 64, 670, 965, 997, 1114, 1224, 1361, 1414, 1661
KpnI GGTACC 1 cut(s) 1365
Ksp22I TGATCA 1 cut(s) 582
Kzo9I GATC 8 cut(s) 170, 367, 452, 497, 582, 873, 889, 1494
LguI GCTCTTC 1 cut(s) 1454
LmnI GCTCC 4 cut(s) 460, 982, 988, 1060
Lsp1109I GCAGC 5 cut(s) 661, 740, 794, 797, 1598
LweI GCATC 2 cut(s) 390, 1150
MaeII ACGT 1 cut(s) 1503
MaeIII GTNAC 3 cut(s) 163, 292, 607
MalI GATC 8 cut(s) 172, 369, 454, 499, 584, 875, 891, 1496
MbiI CCGCTC 1 cut(s) 1093
MboI GATC 8 cut(s) 170, 367, 452, 497, 582, 873, 889, 1494
MboII GAAGA 9 cut(s) 342, 346, 810, 1022, 1081, 1256, 1354, 1471, 1478
MfeI CAATTG 2 cut(s) 1064, 1268
MflI RGATCY 3 cut(s) 170, 497, 889
MhlI GDGCHC 3 cut(s) 142, 855, 993
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 4 cut(s) 722, 1112, 1118, 1226
MmeI TCCRAC 3 cut(s) 987, 1411, 1423
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 3 cut(s) 645, 999, 1416
MscI TGGCCA 1 cut(s) 5
Msp20I TGGCCA 1 cut(s) 5
MspCI CTTAAG 1 cut(s) 845
MspI CCGG 2 cut(s) 919, 1035
MspR9I CCNGG 3 cut(s) 422, 718, 1649
MunI CAATTG 2 cut(s) 1064, 1268
Mva1269I GAATGC 1 cut(s) 283
MvaI CCWGG 3 cut(s) 422, 718, 1649
MvnI CGCG 1 cut(s) 679
MwoI GCNNNNNNNGC 5 cut(s) 649, 655, 758, 850, 975
NcoI CCATGG 1 cut(s) 1357
NdeII GATC 8 cut(s) 170, 367, 452, 497, 582, 873, 889, 1494
NlaIII CATG 9 cut(s) 64, 670, 965, 997, 1114, 1224, 1361, 1414, 1661
NlaIV GGNNCC 3 cut(s) 760, 917, 1363
NmuCI GTSAC 1 cut(s) 607
NruI TCGCGA 1 cut(s) 679
NsiI ATGCAT 3 cut(s) 645, 999, 1416
NspI RCATGY 3 cut(s) 997, 1414, 1661
NspV TTCGAA 1 cut(s) 481
PagI TCATGA 1 cut(s) 666
PciI ACATGT 1 cut(s) 1657
PciSI GCTCTTC 1 cut(s) 1454
PctI GAATGC 1 cut(s) 283
PfeI GAWTC 7 cut(s) 87, 178, 212, 674, 1144, 1152, 1574
PflFI GACNNNGTC 1 cut(s) 1550
PkrI GCNGC 5 cut(s) 651, 730, 784, 787, 1588
PleI GAGTC 4 cut(s) 721, 1112, 1118, 1225
PpsI GAGTC 4 cut(s) 721, 1112, 1118, 1225
PpuMI RGGWCCY 1 cut(s) 218
PscI ACATGT 1 cut(s) 1657
Psp5II RGGWCCY 1 cut(s) 218
Psp6I CCWGG 3 cut(s) 420, 716, 1647
PspFI CCCAGC 1 cut(s) 833
PspGI CCWGG 3 cut(s) 420, 716, 1647
PspN4I GGNNCC 3 cut(s) 760, 917, 1363
PspPI GGNCC 4 cut(s) 218, 572, 1261, 1645
PspPPI RGGWCCY 1 cut(s) 218
PstI CTGCAG 1 cut(s) 492
PstNI CAGNNNCTG 2 cut(s) 221, 1163
PsuI RGATCY 3 cut(s) 170, 497, 889
PsyI GACNNNGTC 1 cut(s) 1550
RruI TCGCGA 1 cut(s) 679
RsaI GTAC 7 cut(s) 202, 375, 693, 1097, 1363, 1404, 1681
RsaNI GTAC 7 cut(s) 201, 374, 692, 1096, 1362, 1403, 1680
SapI GCTCTTC 1 cut(s) 1454
SatI GCNGC 5 cut(s) 650, 729, 783, 786, 1587
Sau3AI GATC 8 cut(s) 170, 367, 452, 497, 582, 873, 889, 1494
Sau96I GGNCC 4 cut(s) 218, 572, 1261, 1645
ScaI AGTACT 2 cut(s) 693, 1681
SchI GAGTC 4 cut(s) 722, 1112, 1118, 1226
ScrFI CCNGG 3 cut(s) 422, 718, 1649
SduI GDGCHC 3 cut(s) 142, 855, 993
SfaNI GCATC 2 cut(s) 390, 1150
SfcI CTRYAG 2 cut(s) 448, 488
SfuI TTCGAA 1 cut(s) 481
SinI GGWCC 3 cut(s) 218, 572, 1261
SmlI CTYRAG 2 cut(s) 562, 845
SmoI CTYRAG 2 cut(s) 562, 845
SsiI CCGC 2 cut(s) 656, 1093
StyD4I CCNGG 3 cut(s) 420, 716, 1647
StyI CCWWGG 1 cut(s) 1357
TaaI ACNGT 1 cut(s) 1283
TaiI ACGT 1 cut(s) 1506
TaqI TCGA 2 cut(s) 21, 481
TaqII GACCGA 1 cut(s) 1216
TatI WGTACW 3 cut(s) 200, 691, 1679
TfiI GAWTC 7 cut(s) 87, 178, 212, 674, 1144, 1152, 1574
TscAI CASTG 4 cut(s) 418, 462, 616, 1288
TseFI GTSAC 1 cut(s) 607
TseI GCWGC 5 cut(s) 649, 728, 782, 785, 1586
Tsp45I GTSAC 1 cut(s) 607
TspDTI ATGAA 8 cut(s) 174, 525, 625, 655, 683, 1328, 1434, 1622
TspRI CASTG 4 cut(s) 418, 462, 616, 1288
Tth111I GACNNNGTC 1 cut(s) 1550
Vha464I CTTAAG 1 cut(s) 845
VpaK11BI GGWCC 3 cut(s) 218, 572, 1261
XagI CCTNNNNNAGG 1 cut(s) 746
XapI RAATTY 2 cut(s) 74, 1048
XceI RCATGY 3 cut(s) 997, 1414, 1661
XcmI CCANNNNNNNNNTGG 1 cut(s) 205
XmiI GTMKAC 1 cut(s) 1194
ZrmI AGTACT 2 cut(s) 693, 1681
Zsp2I ATGCAT 3 cut(s) 645, 999, 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.