Rh2AG446300

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
65918398 .. 65921982
3585 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG446300.1

Sequence Viewer

Length: 3585 bp
ATGGCGGACCACACATTTGCCATCTTTTGCATCCTGTTTGTCATTGTCGTTATCCTTTACCTTGTCGCAAGTGAAGGTGCTTTCAGATACTCGGACGGGAAGTACGAGTTGGTTAGAAGAGAACTCAGGTTAACGCATGCTCTGTTAAAAGATTGCGCGAAAGTGTCCAGGTCAGCCGAACTAGTCACTCGAACAGCCAGTCAGTTTTCGGATTCCGATCAAATCCAAGATGGAACGAGTGCACAAGTACTAAATGAGAGCGAGAAAGGCTGGATAAAGAAAGCAAGAGAATCAGTTGTTGATGCAACTCCGTGCCTCCAAAGCTTTAAAAATTTGAGGAGCAGAAGAAATGCCAAATGGTTGCTCTCCATCGTGCTTGATATCGCACCGAGGTTTGATGCTGCCCTTAAGATGAAACTGTTCGACGAAACCATAAATGATAACCTTGGAGTGGATCAGAGCGAGAAGAAAGTATGTGCCAGTGGAATCAATAAATCAGTGGAGCAGTCAAGATCCATGATCAGAAGCCTGCTAGACAGATCTAGTGTACATGAGGTTGAATCTGCCAAGTTCAGACCACCTGTTGGCACAATAAAAGCTGATGAATTAACTTCGTCTCTGAAGACTTTGAGCACTAGACACCCATATTTGATGCAGGCCCAGCTTGAGGTGCACGTAAAATCCACCATGATGCATTTACAGCTACTTCATGCTTTCATGGAAGATGTACACGGCCTCAAAGTGCTGGAAAGTGAAATGGAAAAAACCTGGGTGATGGAAGCGAACGACACCATTAGTCAAGCGAAGGATGTGATTGACACCATAAATGCCACAGAAAACAAGAGAGGATGGATTTCAGAACCGAATAACTGGATTCGTAGGTGGAAGCATAGGGAGGACATAGTGTCTGTTGGCACCCGGATCTCTGGCCTCCTCACAACAAAGGAAAGATTTGGTGTCAATTTCATCAAATTTATTGAGTCATCAAAATCTGCCCACCACTCTCCTCAGCACCAAGCCTTTCAGCAACCAACTGAAGCTGAAATTGGCTTGTCGGATGCAGTCAACAACATCCGTAACTTGCTCGATCAACTGCTAAAGAAGAGCACCAAGTTAGTATCTCTAGTCAGCAAAGTGAATGAGGAGTTGGATAAACTTTTCGAACATACAAAGGAAACTGAAGAATATGCTGTGAATCTGAGAAATGCTTCCTGGAAGCTGTTGAAGAAAACCGCTTCAGAAGCAAACGAGCAGTACCAGAAAACCGCTTCGAAGTTTCTATCAAAAACAATACTTGTTCGCATCAAGAATGCTGTCAATGTTCTTGAGAGATGCCTGAAAGTATATTCCATTGACGCAAGGGAGGAGTCATGCTCAGTAGTTGGTTTGGACGAAGACATACACGAACTGGTCTCGAGACTCACTACTAATAGTGAACGTGCTAGTTCTATCATACCCATTGTGGGGATGAAGGGCATAGGTAAGACCACTCTAGCCAAGCAAGTTTACTACCATGCTAACATTGTGGAGCACTTTCCAGTCCGTCGTTGGGTATCCCTACCTCCATACCAAAACTCTGATGAATTTGCATTTTTAAGAAGTGTTGGGATCCAGGTCCGGGAGACCAAAGAGAAGTATTCGAATGCATACGAATCAAAAGCCTACTGGATCAACAGAGTGCGCAATTTCTTGAACATGAACATGTTCCTTTTAGTATTGGACAATGTCGTGTCCATGGAAGTCTGGGATTCTCTCAAGCAAGCACTGCCAGAGAGGACTAAAGGGAGCAAGATTGTGCTGATCACACGCAACAAGGCAATTGCTTTAAATGCTGACCGAGATAGCATTCCTCACCAACTGAGGCTACGAACTCAAGAAGAGAGCTGGGAGCTTTTCTCTCAGATAGTGCTAGTACAGTACAATGATCCCAAGAAAAAGGAAACCAATCGTGTGAAGGAAGTTGTAGGAAGCAGCTTTGGAGGCTTACCACTTGACATTATAGGCTCTGGCAGTTTACTTTGGGGGAAACAAATCACAACCGAAGAAATTTTGAGGGTTCTTGGACGTAGCACTACTCAAGGACAGGACCAAAATCCTTGGTCACTGAACAAGGCAGTAAATGAAGACGACTTGCAAGAGAATCAGAGTTTTAGGCACTGTTTGTCTTACTTCCAGCTCTTCCCGCCGGACTTTGAAATCCCTGTCAGGAGAATAGTGGCTTGGTGGGTTGCAAGAGAGCTGGAAGGAATCAATGAGAATCATATTCCTGAAAACTGGGTTACTCAACGGTTGAGACGAGTTAATGAGATTCGTATTCCTGAAACTCTTGCGAATGAGTATCTACAAGAGTTGATCGGCCGTAACATGATTCAAGTAGTCAAGAAAAAGCCTGATGGGAAAGCCAAGACATGTCGATTGCCTAGTTCTATGGGAGCTCTGTTGTTGCAAGGCCAAGGCGTTAATAGCAGCGAAACTGATCCCTCTGAATCATCTCCTGATCAAGATCATGGTCCTACCGGAACAAATACACAGCAGAATGAAAGCGAACACAAGTCCATTATCTTCTTCGAGACTGTAGAGCGAAATAAACCGAATCAAGAAATATGTGACTTCCTACGCAAAGGCATTGCTGATGGTTTCTTGGGACAACTACAATTTCTTGACCTTGAACGTGTATTCCAACCACTGTTGCCGAACGCCATCGGAAATTTAAAGCGGCTGGTATATCTGGGCTTAAGGTGGACTTACCTTGAGTCGATTCCAAAATCTATTGGCAAGTTGGTCGAACTCCAGACCCTTGATTTGAAGCATACTTACATTCAGCACAATCTTCCTAGTTCAATCTGGAAACTGAAGAAACTTCGGTATCTCTACTTAAATCACAACTGTCAATTGCCACAATTGACTCGGTTGATATTATTGCCTCGATCAAATACCATTGGCATGAAGGATCTACAGAAATTGTCTGGTGTGTTTGTGGATAATGTAAATCTGGTTAAGGATGGGCTTGGAAAGTTGATCAACCTAAGAAAATTGGAGTTGGCATTCCAGCTTGACACTTCGGACGAGCAAGATGTAGTGGAAAGTTGGATTGCGAAGCTCAAGTTCTTAGAGTCTTTGAAGTTGAAATCAATTGATAAGAAGAGGAAACTTCGGGATCTGAAATTACAGTTTCTCCCAACCCTTGAGCTACTGTCCCGGTTACATTTGTTTGGAAAGCTTGTAAATCGACAAATCATCAACCAAGTTCCACAAAGCCTAACTCATCTTACCCTCTCTGCCTCTGAAATCGAAGACGATCCAATGCCGGTGCTAGGCACGCTTCAGAATCTCATATCGCTATCTTTCTACTCTGGTTCTTATCTTGGAAGACGCATGGTTTGCCGCATGAATGGGTTTCCGAAGCTTGTAGTTCTGAAGCTTTGTAAGCTTGATGCCCTGGAAATATTGGATTTGCAAGAAGCAATGCCAAAGCTAAGCAATTTAGTGATTAAATATTCCAAGAAGCCCAAGGTGACTGTTGTTGGATTGACGCGTTTAACCACCGTCCAAGAATTTGAACAATCAGCTGCAGCCGAGGAATAA

Protein Analysis

1194

Amino Acids

136.26

Weight (kDa)

9.01

Isoelectric Point (pI)

43.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 465 - 637 1.9e-30 NB-ARC domain
LRR_14 PF23598 885 - 1183 3.9e-35 Leucine-rich repeat region
LRR_8 PF13855 906 - 962 2.1e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000657)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g34770
malus_domestica MD17G1025700.v1.1
prunus_persica Prupe.3G040600_v2.0.a1 Prupe.3G040800_v2.0.a1 Prupe.3G041000_v2.0.a1 Prupe.3G041100_v2.0.a1 Prupe.3G041500_v2.0.a1 Prupe.4G109400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037700_v2.0.a1
pyrus_communis pycom09g10040 pycom17g16000
rosa_chinensis RchiOBHm_Chr2g0145591 RchiOBHm_Chr2g0145611
rosa_laevigata RLG00000020146 RLG00000020149 RLG00000020151 RLG00000020154
rosa_multiflora Rmu_co7986250.1_g000001 Rmu_co8305779.1_g000001 Rmu_sc0002718.1_g000011 Rmu_sc0002835.1_g000009 Rmu_sc0002835.1_g000016 Rmu_sc0003046.1_g000007 Rmu_sc0003046.1_g000010 Rmu_sc0004445.1_g000006 Rmu_sc0004810.1_g000002 Rmu_sc0006477.1_g000008 Rmu_sc0014329.1_g000001 Rmu_sc0020976.1_g000003 Rmu_sc0021168.1_g000001 Rmu_sc0022199.1_g000001 Rmu_sc0036991.1_g000001 Rmu_sc0041497.1_g000003
rosa_roxburghii Rroxscaffold_152G00434560 Rroxscaffold_152G00434570 Rroxscaffold_152G00434600 Rroxscaffold_152G00434610 Rroxscaffold_2G00100630 Rroxscaffold_2G00100640 Rroxscaffold_2G00100660 Rroxscaffold_2G00100670 Rroxscaffold_2G00100680 Rroxscaffold_2G00100690
rosa_rugosa Rorug02G0392300 Rorug02G0392400 Rorug02G0392400
rosa_samantha Rh2AG445700 Rh2AG445800 Rh2AG446000 Rh2AG446100 Rh2AG446300 Rh2AG446600 Rh2BG457400 Rh2BG457500 Rh2BG457600 Rh2BG457900 Rh2BG458300 Rh2CG432300 Rh2CG432400 Rh2CG432500 Rh2CG432700 Rh2CG432900 Rh2CG433000 Rh2CG433300 Rh2DG467100 Rh2DG467200 Rh2DG467300 Rh2DG467600 Rh2DG467900 Rh3DG194100
rosa_wichuraiana Rw2G036420 Rw2G036450 Rw2G036470 Rw3G014900 Rw3G014920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1682
AccB1I GGYRCC 1 cut(s) 914
AccB7I CCANNNNNTGG 1 cut(s) 584
AccII CGCG 2 cut(s) 158, 3535
AciI CCGC 6 cut(s) 5, 1233, 1266, 2183, 2716, 3385
AcoI YGGCCR 1 cut(s) 2356
AcsI RAATTY 6 cut(s) 331, 971, 1583, 2046, 2707, 3554
AcuI CTGAAG 7 cut(s) 641, 1056, 1200, 1221, 2873, 3308, 3437
AfaI GTAC 7 cut(s) 104, 249, 549, 729, 1256, 1914, 1919
AfiI CCNNNNNNNGG 8 cut(s) 451, 584, 667, 1463, 1464, 1549, 1618, 3314
AflII CTTAAG 2 cut(s) 407, 2734
AflIII ACRYGT 4 cut(s) 1701, 2408, 2671, 3533
AhdI GACNNNNNGTC 1 cut(s) 904
AhlI ACTAGT 1 cut(s) 181
AjnI CCWGG 5 cut(s) 167, 767, 1211, 1611, 3438
AjuI GAANNNNNNNTTGG 8 cut(s) 92, 124, 1029, 1061, 1130, 1162, 2203, 2235
AloI GAACNNNNNNTCC 2 cut(s) 2661, 2693
Alw21I GWGCWC 6 cut(s) 244, 635, 675, 1109, 1533, 2437
Alw26I GTCTC 6 cut(s) 621, 1411, 1417, 1616, 2287, 2564
Alw44I GTGCAC 2 cut(s) 240, 671
Ama87I CYCGRG 1 cut(s) 1414
AoxI GGCC 5 cut(s) 657, 733, 928, 2356, 2449
ApaLI GTGCAC 2 cut(s) 240, 671
ApeKI GCWGC 5 cut(s) 401, 1971, 2466, 3569, 3572
ApoI RAATTY 6 cut(s) 331, 971, 1583, 2046, 2707, 3554
ArsI GACNNNNNNTTYG 7 cut(s) 31, 184, 216, 2785, 2817, 3363, 3395
Asp700I GAANNNNTTC 3 cut(s) 419, 1207, 1703
AspLEI GCGC 2 cut(s) 158, 1683
AspS9I GGNCC 5 cut(s) 7, 658, 1615, 2086, 2510
AsuC2I CCSGG 3 cut(s) 919, 1619, 3199
AsuHPI GGTGA 3 cut(s) 784, 1844, 3526
AsuII TTCGAA 3 cut(s) 1161, 1271, 1640
AvaI CYCGRG 1 cut(s) 1414
AvaII GGWCC 4 cut(s) 7, 1615, 2086, 2510
BaeGI GKGCMC 2 cut(s) 244, 675
BaeI ACNNNNGTAYC 2 cut(s) 2849, 2882
BamHI GGATCC 1 cut(s) 1608
BanI GGYRCC 1 cut(s) 914
BanII GRGCYC 1 cut(s) 2437
BarI GAAGNNNNNNTAC 2 cut(s) 2798, 2830
BbsI GAAGAC 5 cut(s) 629, 1401, 2130, 3300, 3376
Bbv12I GWGCWC 6 cut(s) 244, 635, 675, 1109, 1533, 2437
BbvCI CCTCAGC 1 cut(s) 1008
BbvI GCAGC 4 cut(s) 388, 1983, 2478, 3556
BccI CCATC 9 cut(s) 29, 224, 377, 769, 843, 2387, 2627, 2708, 2996
BceAI ACGGC 2 cut(s) 748, 2343
BcgI CGANNNNNNTGC 2 cut(s) 2764, 2798
BciT130I CCWGG 5 cut(s) 169, 769, 1213, 1613, 3440
BciVI GTATCC 1 cut(s) 1564
BclI TGATCA 4 cut(s) 519, 1800, 2497, 3018
BcnI CCSGG 3 cut(s) 919, 1619, 3199
BcoDI GTCTC 6 cut(s) 621, 1411, 1417, 1616, 2287, 2564
BcuI ACTAGT 1 cut(s) 181
BfmI CTRYAG 3 cut(s) 2574, 2954, 3570
BfrI CTTAAG 2 cut(s) 407, 2734
BfuI GTATCC 1 cut(s) 1564
BglII AGATCT 1 cut(s) 539
BisI GCNGC 7 cut(s) 402, 1972, 2467, 2717, 3385, 3570, 3573
BlpI GCTNAGC 1 cut(s) 3476
BlsI GCNGC 7 cut(s) 403, 1973, 2468, 2718, 3386, 3571, 3574
BmcAI AGTACT 1 cut(s) 249
Bme1390I CCNGG 8 cut(s) 169, 769, 919, 1213, 1613, 1619, 3199, 3440
Bme18I GGWCC 4 cut(s) 7, 1615, 2086, 2510
BmeRI GACNNNNNGTC 1 cut(s) 904
BmeT110I CYCGRG 1 cut(s) 1414
BmgT120I GGNCC 5 cut(s) 7, 658, 1615, 2086, 2510
BmiI GGNNCC 2 cut(s) 916, 1610
BmrFI CCNGG 8 cut(s) 169, 769, 919, 1213, 1613, 1619, 3199, 3440
BmrI ACTGGG 1 cut(s) 2284
BmsI GCATC 9 cut(s) 39, 292, 388, 642, 681, 1048, 1311, 1322, 3424
BmuI ACTGGG 1 cut(s) 2284
BpiI GAAGAC 5 cut(s) 629, 1401, 2130, 3300, 3376
BplI GAGNNNNNCTC 4 cut(s) 1358, 1390, 1880, 1912
BpmI CTGGAG 1 cut(s) 2774
Bpu10I CCTNAGC 1 cut(s) 1008
Bpu1102I GCTNAGC 1 cut(s) 3476
Bpu14I TTCGAA 3 cut(s) 1161, 1271, 1640
BpuEI CTTGAG 8 cut(s) 686, 1346, 1739, 1857, 2061, 2771, 3086, 3206
BpuMI CCSGG 3 cut(s) 919, 1619, 3199
BsaAI YACGTR 1 cut(s) 676
BsaBI GATNNNNATC 2 cut(s) 216, 2502
BsaI GGTCTC 2 cut(s) 1417, 1616
BsaJI CCNNGG 9 cut(s) 389, 445, 768, 1734, 2096, 2452, 3438, 3510, 3576
BsaWI WCCGGW 1 cut(s) 2516
BsaXI ACNNNNNCTCC 2 cut(s) 3159, 3189
Bsc4I CCNNNNNNNGG 8 cut(s) 451, 584, 667, 1463, 1464, 1549, 1618, 3314
Bse118I RCCGGY 1 cut(s) 3307
Bse1I ACTGG 7 cut(s) 198, 480, 875, 1413, 1538, 1670, 2279
Bse3DI GCAATG 2 cut(s) 2625, 3471
Bse8I GATNNNNATC 2 cut(s) 216, 2502
BseBI CCWGG 5 cut(s) 169, 769, 1213, 1613, 3440
BseDI CCNNGG 9 cut(s) 389, 445, 768, 1734, 2096, 2452, 3438, 3510, 3576
BseGI GGATG 7 cut(s) 30, 814, 854, 1063, 1071, 1473, 3007
BseJI GATNNNNATC 2 cut(s) 216, 2502
BseLI CCNNNNNNNGG 8 cut(s) 451, 584, 667, 1463, 1464, 1549, 1618, 3314
BseMI GCAATG 2 cut(s) 2625, 3471
BseMII CTCAG 6 cut(s) 139, 1022, 1190, 1389, 1850, 1913
BseNI ACTGG 7 cut(s) 198, 480, 875, 1413, 1538, 1670, 2279
BseRI GAGGAG 5 cut(s) 352, 923, 996, 1157, 1379
BseSI GKGCMC 2 cut(s) 244, 675
BseX3I CGGCCG 1 cut(s) 2356
BseXI GCAGC 4 cut(s) 388, 1983, 2478, 3556
BseYI CCCAGC 2 cut(s) 660, 1884
Bsh1236I CGCG 2 cut(s) 158, 3535
Bsh1285I CGRYCG 1 cut(s) 2359
BshFI GGCC 5 cut(s) 659, 735, 930, 2358, 2451
BshNI GGYRCC 1 cut(s) 914
BsiEI CGRYCG 1 cut(s) 2359
BsiHKAI GWGCWC 6 cut(s) 244, 635, 675, 1109, 1533, 2437
BsiHKCI CYCGRG 1 cut(s) 1414
BsiSI CCGG 6 cut(s) 919, 1618, 2186, 2517, 3199, 3308
BslFI GGGAC 2 cut(s) 2658, 3181
BslI CCNNNNNNNGG 8 cut(s) 451, 584, 667, 1463, 1464, 1549, 1618, 3314
BsmAI GTCTC 6 cut(s) 621, 1411, 1417, 1616, 2287, 2564
BsmBI CGTCTC 2 cut(s) 621, 2287
BsmFI GGGAC 2 cut(s) 2658, 3181
BsmI GAATGC 4 cut(s) 1315, 1648, 1845, 3044
BsnI GGCC 5 cut(s) 659, 735, 930, 2358, 2451
Bso31I GGTCTC 2 cut(s) 1417, 1616
BsoBI CYCGRG 1 cut(s) 1414
Bsp119I TTCGAA 3 cut(s) 1161, 1271, 1640
Bsp1286I GDGCHC 6 cut(s) 244, 635, 675, 1109, 1533, 2437
Bsp1407I TGTACA 2 cut(s) 547, 727
Bsp1720I GCTNAGC 1 cut(s) 3476
Bsp19I CCATGG 1 cut(s) 1734
BspACI CCGC 6 cut(s) 5, 1233, 1266, 2183, 2716, 3385
BspANI GGCC 5 cut(s) 659, 735, 930, 2358, 2451
BspCNI CTCAG 6 cut(s) 138, 1021, 1191, 1388, 1851, 1912
BspFNI CGCG 2 cut(s) 158, 3535
BspLI GGNNCC 2 cut(s) 916, 1610
BspMAI CTGCAG 1 cut(s) 3574
BspQI GCTCTTC 2 cut(s) 1097, 2183
BspT104I TTCGAA 3 cut(s) 1161, 1271, 1640
BspT107I GGYRCC 1 cut(s) 914
BspTI CTTAAG 2 cut(s) 407, 2734
BspTNI GGTCTC 2 cut(s) 1417, 1616
BsrDI GCAATG 2 cut(s) 2625, 3471
BsrFI RCCGGY 1 cut(s) 3307
BsrGI TGTACA 2 cut(s) 547, 727
BsrI ACTGG 7 cut(s) 198, 480, 875, 1413, 1538, 1670, 2279
BssAI RCCGGY 1 cut(s) 3307
BssECI CCNNGG 9 cut(s) 389, 445, 768, 1734, 2096, 2452, 3438, 3510, 3576
BssT1I CCWWGG 5 cut(s) 445, 1734, 2096, 2452, 3510
Bst2UI CCWGG 5 cut(s) 169, 769, 1213, 1613, 3440
Bst6I CTCTTC 5 cut(s) 112, 1097, 1872, 2183, 3137
BstAFI CTTAAG 2 cut(s) 407, 2734
BstAPI GCANNNNNTGC 2 cut(s) 1765, 3381
BstAUI TGTACA 2 cut(s) 547, 727
BstBAI YACGTR 1 cut(s) 676
BstBI TTCGAA 3 cut(s) 1161, 1271, 1640
BstC8I GCNNGC 5 cut(s) 138, 530, 657, 1761, 3320
BstDEI CTNAG 9 cut(s) 125, 1008, 1199, 1375, 1859, 1899, 3026, 3109, 3476
BstDSI CCRYGG 1 cut(s) 1734
BstF5I GGATG 7 cut(s) 30, 814, 854, 1063, 1071, 1473, 3007
BstFNI CGCG 2 cut(s) 158, 3535
BstHHI GCGC 2 cut(s) 158, 1683
BstMAI GTCTC 6 cut(s) 621, 1411, 1417, 1616, 2287, 2564
BstMCI CGRYCG 1 cut(s) 2359
BstNI CCWGG 5 cut(s) 169, 769, 1213, 1613, 3440
BstNSI RCATGY 3 cut(s) 140, 1705, 2412
BstSCI CCNGG 8 cut(s) 167, 767, 917, 1211, 1611, 1617, 3197, 3438
BstSFI CTRYAG 3 cut(s) 2574, 2954, 3570
BstSLI GKGCMC 2 cut(s) 244, 675
BstUI CGCG 2 cut(s) 158, 3535
BstV1I GCAGC 4 cut(s) 388, 1983, 2478, 3556
BstV2I GAAGAC 5 cut(s) 629, 1401, 2130, 3300, 3376
BstX2I RGATCY 6 cut(s) 512, 539, 921, 1608, 2950, 3157
BstYI RGATCY 6 cut(s) 512, 539, 921, 1608, 2950, 3157
BstZI CGGCCG 1 cut(s) 2356
BsuI GTATCC 1 cut(s) 1564
BsuRI GGCC 5 cut(s) 659, 735, 930, 2358, 2451
BtgI CCRYGG 1 cut(s) 1734
BtsCI GGATG 7 cut(s) 30, 814, 854, 1063, 1071, 1473, 3007
BtsI GCAGTG 1 cut(s) 1763
BtsIMutI CAGTG 6 cut(s) 487, 504, 1763, 2102, 2155, 2684
Cac8I GCNNGC 5 cut(s) 138, 530, 657, 1761, 3320
CfoI GCGC 2 cut(s) 158, 1683
Cfr10I RCCGGY 1 cut(s) 3307
Cfr13I GGNCC 5 cut(s) 7, 658, 1615, 2086, 2510
CseI GACGC 3 cut(s) 1364, 3381, 3541
Csp6I GTAC 7 cut(s) 103, 248, 548, 728, 1255, 1913, 1918
CviQI GTAC 7 cut(s) 103, 248, 548, 728, 1255, 1913, 1918
DdeI CTNAG 9 cut(s) 125, 1008, 1199, 1375, 1859, 1899, 3026, 3109, 3476
DraI TTTAAA 3 cut(s) 328, 1827, 2712
DriI GACNNNNNGTC 1 cut(s) 904
EaeI YGGCCR 1 cut(s) 2356
EagI CGGCCG 1 cut(s) 2356
Eam1104I CTCTTC 5 cut(s) 112, 1097, 1872, 2183, 3137
Eam1105I GACNNNNNGTC 1 cut(s) 904
EarI CTCTTC 5 cut(s) 112, 1097, 1872, 2183, 3137
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 2435
EclXI CGGCCG 1 cut(s) 2356
Eco130I CCWWGG 5 cut(s) 445, 1734, 2096, 2452, 3510
Eco24I GRGCYC 1 cut(s) 2437
Eco31I GGTCTC 2 cut(s) 1417, 1616
Eco32I GATATC 1 cut(s) 382
Eco47I GGWCC 4 cut(s) 7, 1615, 2086, 2510
Eco52I CGGCCG 1 cut(s) 2356
Eco53kI GAGCTC 1 cut(s) 2435
Eco57I CTGAAG 7 cut(s) 641, 1056, 1200, 1221, 2873, 3308, 3437
Eco88I CYCGRG 1 cut(s) 1414
EcoICRI GAGCTC 1 cut(s) 2435
EcoRII CCWGG 5 cut(s) 167, 767, 1211, 1611, 3438
EcoRV GATATC 1 cut(s) 382
EcoT14I CCWWGG 5 cut(s) 445, 1734, 2096, 2452, 3510
EcoT22I ATGCAT 2 cut(s) 696, 1648
EcoT38I GRGCYC 1 cut(s) 2437
ErhI CCWWGG 5 cut(s) 445, 1734, 2096, 2452, 3510
Esp3I CGTCTC 2 cut(s) 621, 2287
FalI AAGNNNNNCTT 2 cut(s) 2728, 2760
FaqI GGGAC 2 cut(s) 2658, 3181
FauI CCCGC 1 cut(s) 2190
FbaI TGATCA 4 cut(s) 519, 1800, 2497, 3018
Fnu4HI GCNGC 7 cut(s) 402, 1972, 2467, 2717, 3385, 3570, 3573
FokI GGATG 7 cut(s) 17, 821, 861, 1058, 1070, 1480, 3014
FriOI GRGCYC 1 cut(s) 2437
Fsp4HI GCNGC 7 cut(s) 402, 1972, 2467, 2717, 3385, 3570, 3573
FspI TGCGCA 1 cut(s) 1682
GlaI GCGC 2 cut(s) 157, 1682
GluI GCNGC 7 cut(s) 402, 1972, 2467, 2717, 3385, 3570, 3573
GsaI CCCAGC 2 cut(s) 664, 1888
GsuI CTGGAG 1 cut(s) 2774
HaeIII GGCC 5 cut(s) 659, 735, 930, 2358, 2451
HapII CCGG 6 cut(s) 919, 1618, 2186, 2517, 3199, 3308
HgaI GACGC 3 cut(s) 1364, 3381, 3541
HhaI GCGC 2 cut(s) 158, 1683
Hin6I GCGC 2 cut(s) 156, 1681
HinP1I GCGC 2 cut(s) 156, 1681
HincII GTYRAC 2 cut(s) 132, 1066
HindII GTYRAC 2 cut(s) 132, 1066
HindIII AAGCTT 5 cut(s) 322, 3218, 3404, 3419, 3428
HpaI GTTAAC 1 cut(s) 132
HpaII CCGG 6 cut(s) 919, 1618, 2186, 2517, 3199, 3308
HphI GGTGA 3 cut(s) 784, 1844, 3526
Hpy99I CGWCG 2 cut(s) 428, 1548
HpyAV CCTTC 6 cut(s) 68, 799, 1465, 1948, 2237, 2941
HpyCH4IV ACGT 4 cut(s) 675, 1438, 2065, 2671
HpyF3I CTNAG 9 cut(s) 125, 1008, 1199, 1375, 1859, 1899, 3026, 3109, 3476
HpySE526I ACGT 4 cut(s) 675, 1438, 2065, 2671
HspAI GCGC 2 cut(s) 156, 1681
Ksp22I TGATCA 4 cut(s) 519, 1800, 2497, 3018
KspAI GTTAAC 1 cut(s) 132
LguI GCTCTTC 2 cut(s) 1097, 2183
LmnI GCTCC 6 cut(s) 339, 502, 1528, 1785, 1888, 2432
Lsp1109I GCAGC 4 cut(s) 388, 1983, 2478, 3556
LweI GCATC 9 cut(s) 39, 292, 388, 642, 681, 1048, 1311, 1322, 3424
MaeII ACGT 4 cut(s) 675, 1438, 2065, 2671
MaeIII GTNAC 8 cut(s) 184, 1076, 2100, 2278, 2360, 2606, 3201, 3514
MfeI CAATTG 4 cut(s) 1818, 2891, 2900, 3132
MflI RGATCY 6 cut(s) 512, 539, 921, 1608, 2950, 3157
MhlI GDGCHC 6 cut(s) 244, 635, 675, 1109, 1533, 2437
MluI ACGCGT 1 cut(s) 3533
MlyI GAGTC 6 cut(s) 989, 1376, 1413, 2762, 2899, 3122
MmeI TCCRAC 5 cut(s) 1035, 1128, 2704, 3068, 3505
Mph1103I ATGCAT 2 cut(s) 696, 1648
MroXI GAANNNNTTC 3 cut(s) 419, 1207, 1703
MslI CAYNNNNRTG 3 cut(s) 689, 1700, 2942
MspA1I CMGCKG 1 cut(s) 3569
MspCI CTTAAG 2 cut(s) 407, 2734
MspI CCGG 6 cut(s) 919, 1618, 2186, 2517, 3199, 3308
MspR9I CCNGG 8 cut(s) 169, 769, 919, 1213, 1613, 1619, 3199, 3440
MunI CAATTG 4 cut(s) 1818, 2891, 2900, 3132
Mva1269I GAATGC 4 cut(s) 1315, 1648, 1845, 3044
MvaI CCWGG 5 cut(s) 169, 769, 1213, 1613, 3440
MvnI CGCG 2 cut(s) 158, 3535
NciI CCSGG 3 cut(s) 919, 1619, 3199
NcoI CCATGG 1 cut(s) 1734
NlaIV GGNNCC 2 cut(s) 916, 1610
NmuCI GTSAC 4 cut(s) 184, 2100, 2606, 3514
NsbI TGCGCA 1 cut(s) 1682
NsiI ATGCAT 2 cut(s) 696, 1648
NspI RCATGY 3 cut(s) 140, 1705, 2412
NspV TTCGAA 3 cut(s) 1161, 1271, 1640
PaeI GCATGC 1 cut(s) 140
PaeR7I CTCGAG 1 cut(s) 1414
PciI ACATGT 2 cut(s) 1701, 2408
PciSI GCTCTTC 2 cut(s) 1097, 2183
PcsI WCGNNNNNNNCGW 2 cut(s) 102, 2293
PctI GAATGC 4 cut(s) 1315, 1648, 1845, 3044
PdmI GAANNNNTTC 3 cut(s) 419, 1207, 1703
PflFI GACNNNGTC 1 cut(s) 1724
PflMI CCANNNNNTGG 1 cut(s) 584
PfoI TCCNGGA 2 cut(s) 1211, 1617
PkrI GCNGC 7 cut(s) 403, 1973, 2468, 2718, 3386, 3571, 3574
PleI GAGTC 6 cut(s) 988, 1375, 1413, 2761, 2899, 3121
PpsI GAGTC 6 cut(s) 988, 1375, 1413, 2761, 2899, 3121
Ppu21I YACGTR 1 cut(s) 676
PscI ACATGT 2 cut(s) 1701, 2408
Psp124BI GAGCTC 1 cut(s) 2437
Psp6I CCWGG 5 cut(s) 167, 767, 1211, 1611, 3438
PspFI CCCAGC 2 cut(s) 660, 1884
PspGI CCWGG 5 cut(s) 167, 767, 1211, 1611, 3438
PspN4I GGNNCC 2 cut(s) 916, 1610
PspPI GGNCC 5 cut(s) 7, 658, 1615, 2086, 2510
PstI CTGCAG 1 cut(s) 3574
PsuI RGATCY 6 cut(s) 512, 539, 921, 1608, 2950, 3157
PsyI GACNNNGTC 1 cut(s) 1724
PvuII CAGCTG 1 cut(s) 3569
RsaI GTAC 7 cut(s) 104, 249, 549, 729, 1256, 1914, 1919
RsaNI GTAC 7 cut(s) 103, 248, 548, 728, 1255, 1913, 1918
RseI CAYNNNNRTG 3 cut(s) 689, 1700, 2942
SacI GAGCTC 1 cut(s) 2437
SapI GCTCTTC 2 cut(s) 1097, 2183
SatI GCNGC 7 cut(s) 402, 1972, 2467, 2717, 3385, 3570, 3573
Sau96I GGNCC 5 cut(s) 7, 658, 1615, 2086, 2510
ScaI AGTACT 1 cut(s) 249
SchI GAGTC 6 cut(s) 989, 1376, 1413, 2762, 2899, 3122
ScrFI CCNGG 8 cut(s) 169, 769, 919, 1213, 1613, 1619, 3199, 3440
SduI GDGCHC 6 cut(s) 244, 635, 675, 1109, 1533, 2437
SfaNI GCATC 9 cut(s) 39, 292, 388, 642, 681, 1048, 1311, 1322, 3424
SfcI CTRYAG 3 cut(s) 2574, 2954, 3570
Sfr274I CTCGAG 1 cut(s) 1414
SfuI TTCGAA 3 cut(s) 1161, 1271, 1640
SinI GGWCC 4 cut(s) 7, 1615, 2086, 2510
SlaI CTCGAG 1 cut(s) 1414
SmiMI CAYNNNNRTG 3 cut(s) 689, 1700, 2942
SpeI ACTAGT 1 cut(s) 181
SphI GCATGC 1 cut(s) 140
SsiI CCGC 6 cut(s) 5, 1233, 1266, 2183, 2716, 3385
SspI AATATT 2 cut(s) 3447, 3497
SstI GAGCTC 1 cut(s) 2437
StyD4I CCNGG 8 cut(s) 167, 767, 917, 1211, 1611, 1617, 3197, 3438
StyI CCWWGG 5 cut(s) 445, 1734, 2096, 2452, 3510
TaiI ACGT 4 cut(s) 678, 1441, 2068, 2674
TaqII GACCGA 1 cut(s) 1851
TatI WGTACW 5 cut(s) 247, 547, 727, 1912, 1917
TauI GCSGC 2 cut(s) 2719, 3387
TscAI CASTG 6 cut(s) 487, 504, 1770, 2109, 2162, 2691
TseFI GTSAC 4 cut(s) 184, 2100, 2606, 3514
TseI GCWGC 5 cut(s) 401, 1971, 2466, 3569, 3572
Tsp45I GTSAC 4 cut(s) 184, 2100, 2606, 3514
TspGWI ACGGA 3 cut(s) 300, 1064, 1532
TspRI CASTG 6 cut(s) 487, 504, 1770, 2109, 2162, 2691
Tth111I GACNNNGTC 1 cut(s) 1724
Van91I CCANNNNNTGG 1 cut(s) 584
Vha464I CTTAAG 2 cut(s) 407, 2734
VneI GTGCAC 2 cut(s) 240, 671
VpaK11BI GGWCC 4 cut(s) 7, 1615, 2086, 2510
XapI RAATTY 6 cut(s) 331, 971, 1583, 2046, 2707, 3554
XceI RCATGY 3 cut(s) 140, 1705, 2412
XcmI CCANNNNNNNNNTGG 1 cut(s) 1545
XhoI CTCGAG 1 cut(s) 1414
XmnI GAANNNNTTC 3 cut(s) 419, 1207, 1703
ZrmI AGTACT 1 cut(s) 249
Zsp2I ATGCAT 2 cut(s) 696, 1648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.