Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000657

Physical Location & Seq

Genomic Coordinates Forward (+)

22446212 .. 22447972

Gene Structure 1761 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00100630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGTCGTCTCCATCATGGCAAACCGTTGAGAATCTGCAGCAAAAGATGCTGGAGGTATCCGAGCTGCTCATCCTCCTTTGTACGCAACTCTGCTTTTGGTTGAAGTTGCAGAGCGAGCACCCCGTGGTCCGAAAAGTACTTGTTACCTGCTGCATCTTGTTTGCCTTCTATGCTCTTTGCATTGCCGTAAGTGAAGTTGCTTTCAGATACTCGGATGGGGGGAAGTACAAGTGGATTACAAGAGAGTGGAAGTTGCTGCGTGCACTTAAACAAGACTACGAAGAAATTTCCAAATCCGCCAGTCAAATAGCAAAGAAATCTCGTCAGTATTTAGACTCCGATCTGGTCCAAGATGGAATATCTGTACAAGTACTGGATGACAGGGAGAAAGGCTGGATAACCAAAGCAGAAAAAGTGGTTAAAGATGCAACTCCGTTCATTCAAAAATTCCAAAGTTTAAGAGAGAGAAGAAAATCTCTCAAGTGGTATGTTTTCTTCTTATTTGAGTCAATTAAGACGGTGGATGCCGCCTTTGGGATGAAGTGGTTCGAGGACAAGATAAGAGATAACCTTGGCATGAATACGAATGCGGATGTAAATGTGAATCAAGGCGGGGAGGTGAATAAGACTACTGTATGTGCTGATGACGTCAATGGATCATTGGAGCAGTCAAGGTCCAAGATTAGAAGCCTGCTGGACAGATCTAGTGTGGATGAGAGTAAGTTTGTCGAGCCCACAATGAATGTTCGCTTCAGTGCGGATGGGTTGATTTCCTCTCTAAAGAGCCTGATGACTAACAACCACGAGTTGATGCATGGCGTGGAAGTGCAAATGAAGTCTTTCAGAATGTATTTGCAGCTACTTAATGCTTTCATGAAAGATATAAAACAGCTCAAAGTACTGGAGAGTAAAATAGAGAGATCCTGGGTTGTGGAAGCAATCGAGACCATTGAAGACGCGAAGGATGTGATTGACAACATGAGTATAAAAGCTAACCAAAAACAGAAAAGGTTTATGTGCCGAGGGCTGTCAAAGCTTTCAGTTTTGAGTAATTGGATGGTGAGGCGAGAGGTCAAAAGGGACATGAAGCTTGTTTGTACCAGGATCTCTGGCCTCCTGGAAACAAAGGAAAGGTATGGTATCAAATTCATTAGACGAGATTTGTTGAAATCGTTCCTTTCAAAAACGGAATCATCAAACCACTCACATCTACATCCAAGTGGTGGTCCTCCACAACAGCAAACTGTTGATCGCCATCAGCTGGCTGCAGATGTTACGAAGCGGTCACCATCAGTACTAGTCGAGCTCATTCTCAACTGGCTCAACCAACTGCCAGGTACAAGCAGCGAATTGGTGGATCATGTAGAATTGCTGAGAAAGGAGTTGAAGGGCATGCTTGAGCATGTCAATGATGTAAAAGTGAGGGGAGATTGTGTTATTAATTTAAGATATACTTGTTTGGAGCAATTGGAGAATCTGGCTGTTGAAGCACACATGGAAGATTCAGACCGGTTGCCTTCAAAACTTCTCTCAGATATTATTATCCGAATAGAGCATGCTGTAAGATGCATAAGAGTGTATTCGATTGAGGTAAGGGAGGATGCATGCTCAGTAGTTGGTTTTGAAGAAGACATAGACGACCTGGTCTCGCGTCTGATCCATGAAGGAAATGATCATCCCTCTATCATTTGTATCGAGGGGATGAAGGGCATTGGTAAGACTACTCTAGCGAAGAAAGTTTTTACCAAAAAACCATTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009506 GO:0009626 GO:0009987 GO:0012501 GO:0016020 GO:0019897 GO:0019898 GO:0023052 GO:0030054 GO:0033554 GO:0034050 GO:0036094 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0071944 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 NB-ARC

Protein Analysis

586

Amino Acids

67.27

Weight (kDa)

8.6

Isoelectric Point (pI)

44.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	256 - 336	1.7e-09	Rx N-terminal domain
NB-ARC	PF00931	542 - 583	5.7e-06	NB-ARC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000657)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g34770
malus_domestica	MD17G1025700.v1.1
prunus_persica	Prupe.3G040600_v2.0.a1 Prupe.3G040800_v2.0.a1 Prupe.3G041000_v2.0.a1 Prupe.3G041100_v2.0.a1 Prupe.3G041500_v2.0.a1 Prupe.4G109400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037700_v2.0.a1
pyrus_communis	pycom09g10040 pycom17g16000
rosa_chinensis	RchiOBHm_Chr2g0145591 RchiOBHm_Chr2g0145611
rosa_laevigata	RLG00000020146 RLG00000020149 RLG00000020151 RLG00000020154
rosa_multiflora	Rmu_co7986250.1_g000001 Rmu_co8305779.1_g000001 Rmu_sc0002718.1_g000011 Rmu_sc0002835.1_g000009 Rmu_sc0002835.1_g000016 Rmu_sc0003046.1_g000007 Rmu_sc0003046.1_g000010 Rmu_sc0004445.1_g000006 Rmu_sc0004810.1_g000002 Rmu_sc0006477.1_g000008 Rmu_sc0014329.1_g000001 Rmu_sc0020976.1_g000003 Rmu_sc0021168.1_g000001 Rmu_sc0022199.1_g000001 Rmu_sc0036991.1_g000001 Rmu_sc0041497.1_g000003
rosa_roxburghii	Rroxscaffold_152G00434560 Rroxscaffold_152G00434570 Rroxscaffold_152G00434600 Rroxscaffold_152G00434610 Rroxscaffold_2G00100630 Rroxscaffold_2G00100640 Rroxscaffold_2G00100660 Rroxscaffold_2G00100670 Rroxscaffold_2G00100680 Rroxscaffold_2G00100690
rosa_rugosa	Rorug02G0392300 Rorug02G0392400 Rorug02G0392400
rosa_samantha	Rh2AG445700 Rh2AG445800 Rh2AG446000 Rh2AG446100 Rh2AG446300 Rh2AG446600 Rh2BG457400 Rh2BG457500 Rh2BG457600 Rh2BG457900 Rh2BG458300 Rh2CG432300 Rh2CG432400 Rh2CG432500 Rh2CG432700 Rh2CG432900 Rh2CG433000 Rh2CG433300 Rh2DG467100 Rh2DG467200 Rh2DG467300 Rh2DG467600 Rh2DG467900 Rh3DG194100
rosa_wichuraiana	Rw2G036420 Rw2G036450 Rw2G036470 Rw3G014900 Rw3G014920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1643
AatII	GACGTC	1 cut(s)	651
Acc36I	ACCTGC	1 cut(s)	155
AccB7I	CCANNNNNTGG	2 cut(s)	1223, 1261
AccII	CGCG	2 cut(s)	959, 1651
AciI	CCGC	6 cut(s)	297, 528, 590, 612, 758, 1282
AclWI	GGATC	5 cut(s)	664, 915, 1112, 1365, 1651
AcsI	RAATTY	3 cut(s)	285, 446, 1145
AcuI	CTGAAG	1 cut(s)	736
AcyI	GRCGYC	1 cut(s)	648
AdeI	CACNNNGTG	1 cut(s)	124
AfaI	GTAC	9 cut(s)	82, 138, 227, 366, 372, 900, 1099, 1296, 1339
AfiI	CCNNNNNNNGG	3 cut(s)	534, 1223, 1261
AgeI	ACCGGT	1 cut(s)	1509
AgsI	TTSAA	9 cut(s)	103, 443, 953, 1168, 1182, 1387, 1487, 1521, 1625
AhlI	ACTAGT	1 cut(s)	1297
AjnI	CCWGG	5 cut(s)	923, 1100, 1116, 1333, 1641
AluBI	AGCT	8 cut(s)	64, 859, 892, 992, 1036, 1090, 1261, 1306
AluI	AGCT	8 cut(s)	64, 859, 892, 992, 1036, 1090, 1261, 1306
Alw21I	GWGCWC	3 cut(s)	120, 265, 1308
Alw26I	GTCTC	3 cut(s)	12, 938, 1651
Alw44I	GTGCAC	1 cut(s)	261
AlwI	GGATC	5 cut(s)	664, 915, 1112, 1365, 1651
AoxI	GGCC	1 cut(s)	1111
ApaLI	GTGCAC	1 cut(s)	261
ApeKI	GCWGC	7 cut(s)	37, 64, 150, 256, 856, 1265, 1344
ApoI	RAATTY	3 cut(s)	285, 446, 1145
AseI	ATTAAT	1 cut(s)	1440
AsiGI	ACCGGT	1 cut(s)	1509
Asp700I	GAANNNNTTC	3 cut(s)	545, 839, 1172
AspS9I	GGNCC	4 cut(s)	127, 346, 675, 1226
AsuHPI	GGTGA	3 cut(s)	631, 1072, 1278
AvaII	GGWCC	4 cut(s)	127, 346, 675, 1226
BaeGI	GKGCMC	1 cut(s)	265
BanII	GRGCYC	2 cut(s)	735, 1308
BarI	GAAGNNNNNNTAC	2 cut(s)	479, 511
BauI	CACGAG	1 cut(s)	803
BbsI	GAAGAC	2 cut(s)	960, 1635
Bbv12I	GWGCWC	3 cut(s)	120, 265, 1308
BbvI	GCAGC	7 cut(s)	49, 51, 137, 243, 868, 1252, 1356
BccI	CCATC	7 cut(s)	19, 209, 347, 755, 1051, 1263, 1297
BceAI	ACGGC	1 cut(s)	170
BciT130I	CCWGG	5 cut(s)	925, 1102, 1118, 1335, 1643
BciVI	GTATCC	1 cut(s)	67
BclI	TGATCA	1 cut(s)	1672
BcoDI	GTCTC	3 cut(s)	12, 938, 1651
BcuI	ACTAGT	1 cut(s)	1297
BfaI	CTAG	3 cut(s)	705, 1298, 1727
BfmI	CTRYAG	2 cut(s)	35, 1266
BfuAI	ACCTGC	1 cut(s)	155
BfuI	GTATCC	1 cut(s)	67
BglII	AGATCT	1 cut(s)	701
BisI	GCNGC	8 cut(s)	38, 65, 151, 257, 528, 857, 1266, 1345
BlsI	GCNGC	8 cut(s)	39, 66, 152, 258, 529, 858, 1267, 1346
BmcAI	AGTACT	4 cut(s)	138, 372, 900, 1296
Bme1390I	CCNGG	5 cut(s)	925, 1102, 1118, 1335, 1643
Bme18I	GGWCC	4 cut(s)	127, 346, 675, 1226
BmgT120I	GGNCC	4 cut(s)	127, 346, 675, 1226
BmrFI	CCNGG	5 cut(s)	925, 1102, 1118, 1335, 1643
BmsI	GCATC	7 cut(s)	36, 162, 415, 514, 801, 1556, 1591
BpiI	GAAGAC	2 cut(s)	960, 1635
BpmI	CTGGAG	2 cut(s)	71, 923
BpuEI	CTTGAG	2 cut(s)	464, 1418
BsaBI	GATNNNNATC	1 cut(s)	1254
BsaHI	GRCGYC	1 cut(s)	648
BsaI	GGTCTC	2 cut(s)	938, 1651
BsaJI	CCNNGG	4 cut(s)	123, 571, 924, 1021
BsaWI	WCCGGW	1 cut(s)	1509
BsaXI	ACNNNNNCTCC	2 cut(s)	1419, 1449
Bsc4I	CCNNNNNNNGG	3 cut(s)	534, 1223, 1261
Bse118I	RCCGGY	1 cut(s)	1509
Bse1I	ACTGG	4 cut(s)	300, 378, 906, 1322
Bse3DI	GCAATG	1 cut(s)	180
Bse8I	GATNNNNATC	1 cut(s)	1254
BseBI	CCWGG	5 cut(s)	925, 1102, 1118, 1335, 1643
BseDI	CCNNGG	4 cut(s)	123, 571, 924, 1021
BseJI	GATNNNNATC	1 cut(s)	1254
BseLI	CCNNNNNNNGG	3 cut(s)	534, 1223, 1261
BseMI	GCAATG	1 cut(s)	180
BseMII	CTCAG	3 cut(s)	1364, 1545, 1623
BseNI	ACTGG	4 cut(s)	300, 378, 906, 1322
BseSI	GKGCMC	1 cut(s)	265
BseXI	GCAGC	7 cut(s)	49, 51, 137, 243, 868, 1252, 1356
Bsh1236I	CGCG	2 cut(s)	959, 1651
BshFI	GGCC	1 cut(s)	1113
BshTI	ACCGGT	1 cut(s)	1509
BsiHKAI	GWGCWC	3 cut(s)	120, 265, 1308
BsiSI	CCGG	1 cut(s)	1510
BslFI	GGGAC	1 cut(s)	1094
BslI	CCNNNNNNNGG	3 cut(s)	534, 1223, 1261
BsmAI	GTCTC	3 cut(s)	12, 938, 1651
BsmBI	CGTCTC	1 cut(s)	12
BsmFI	GGGAC	1 cut(s)	1094
BsmI	GAATGC	1 cut(s)	592
BsnI	GGCC	1 cut(s)	1113
Bso31I	GGTCTC	2 cut(s)	938, 1651
Bsp1286I	GDGCHC	4 cut(s)	120, 265, 735, 1308
Bsp1407I	TGTACA	1 cut(s)	364
Bsp143I	GATC	9 cut(s)	340, 656, 701, 920, 1104, 1249, 1357, 1656, 1672
BspACI	CCGC	6 cut(s)	297, 528, 590, 612, 758, 1282
BspANI	GGCC	1 cut(s)	1113
BspCNI	CTCAG	3 cut(s)	1365, 1544, 1622
BspFNI	CGCG	2 cut(s)	959, 1651
BspHI	TCATGA	1 cut(s)	873
BspMAI	CTGCAG	2 cut(s)	39, 1270
BspMI	ACCTGC	1 cut(s)	155
BspPI	GGATC	5 cut(s)	664, 915, 1112, 1365, 1651
BspTNI	GGTCTC	2 cut(s)	938, 1651
BsrDI	GCAATG	1 cut(s)	180
BsrFI	RCCGGY	1 cut(s)	1509
BsrGI	TGTACA	1 cut(s)	364
BsrI	ACTGG	4 cut(s)	300, 378, 906, 1322
BssAI	RCCGGY	1 cut(s)	1509
BssECI	CCNNGG	4 cut(s)	123, 571, 924, 1021
BssMI	GATC	9 cut(s)	340, 656, 701, 920, 1104, 1249, 1357, 1656, 1672
BssNI	GRCGYC	1 cut(s)	648
BssSI	CACGAG	1 cut(s)	803
BssT1I	CCWWGG	1 cut(s)	571
Bst2BI	CACGAG	1 cut(s)	803
Bst2UI	CCWGG	5 cut(s)	925, 1102, 1118, 1335, 1643
Bst4CI	ACNGT	4 cut(s)	25, 520, 634, 1246
BstACI	GRCGYC	1 cut(s)	648
BstAPI	GCANNNNNTGC	1 cut(s)	46
BstAUI	TGTACA	1 cut(s)	364
BstC8I	GCNNGC	7 cut(s)	116, 261, 692, 1263, 1394, 1557, 1606
BstDEI	CTNAG	3 cut(s)	1373, 1531, 1609
BstDSI	CCRYGG	1 cut(s)	123
BstEII	GGTNACC	1 cut(s)	1284
BstFNI	CGCG	2 cut(s)	959, 1651
BstKTI	GATC	9 cut(s)	343, 659, 704, 923, 1107, 1252, 1360, 1659, 1675
BstMAI	GTCTC	3 cut(s)	12, 938, 1651
BstMBI	GATC	9 cut(s)	340, 656, 701, 920, 1104, 1249, 1357, 1656, 1672
BstMWI	GCNNNNNNNGC	5 cut(s)	46, 115, 170, 1033, 1487
BstNI	CCWGG	5 cut(s)	925, 1102, 1118, 1335, 1643
BstNSI	RCATGY	4 cut(s)	1396, 1406, 1559, 1608
BstPI	GGTNACC	1 cut(s)	1284
BstSCI	CCNGG	5 cut(s)	923, 1100, 1116, 1333, 1641
BstSFI	CTRYAG	2 cut(s)	35, 1266
BstSLI	GKGCMC	1 cut(s)	265
BstUI	CGCG	2 cut(s)	959, 1651
BstV1I	GCAGC	7 cut(s)	49, 51, 137, 243, 868, 1252, 1356
BstV2I	GAAGAC	2 cut(s)	960, 1635
BstX2I	RGATCY	3 cut(s)	701, 920, 1104
BstYI	RGATCY	3 cut(s)	701, 920, 1104
BsuI	GTATCC	1 cut(s)	67
BsuRI	GGCC	1 cut(s)	1113
BtgI	CCRYGG	1 cut(s)	123
BtsIMutI	CAGTG	1 cut(s)	760
BveI	ACCTGC	1 cut(s)	155
Cac8I	GCNNGC	7 cut(s)	116, 261, 692, 1263, 1394, 1557, 1606
CciI	TCATGA	1 cut(s)	873
Cfr10I	RCCGGY	1 cut(s)	1509
Cfr13I	GGNCC	4 cut(s)	127, 346, 675, 1226
CseI	GACGC	2 cut(s)	965, 1640
CsiI	ACCWGGT	1 cut(s)	1641
Csp6I	GTAC	9 cut(s)	81, 137, 226, 365, 371, 899, 1098, 1295, 1338
CspAI	ACCGGT	1 cut(s)	1509
CviQI	GTAC	9 cut(s)	81, 137, 226, 365, 371, 899, 1098, 1295, 1338
DdeI	CTNAG	3 cut(s)	1373, 1531, 1609
DpnI	GATC	9 cut(s)	342, 658, 703, 922, 1106, 1251, 1359, 1658, 1674
DpnII	GATC	9 cut(s)	340, 656, 701, 920, 1104, 1249, 1357, 1656, 1672
DraIII	CACNNNGTG	1 cut(s)	124
DrdI	GACNNNNNNGTC	1 cut(s)	1643
DseDI	GACNNNNNNGTC	1 cut(s)	1643
EciI	GGCGGA	1 cut(s)	286
Ecl136II	GAGCTC	1 cut(s)	1306
Eco130I	CCWWGG	1 cut(s)	571
Eco24I	GRGCYC	2 cut(s)	735, 1308
Eco31I	GGTCTC	2 cut(s)	938, 1651
Eco47I	GGWCC	4 cut(s)	127, 346, 675, 1226
Eco53kI	GAGCTC	1 cut(s)	1306
Eco57I	CTGAAG	1 cut(s)	736
Eco91I	GGTNACC	1 cut(s)	1284
EcoICRI	GAGCTC	1 cut(s)	1306
EcoO65I	GGTNACC	1 cut(s)	1284
EcoRII	CCWGG	5 cut(s)	923, 1100, 1116, 1333, 1641
EcoT14I	CCWWGG	1 cut(s)	571
EcoT22I	ATGCAT	3 cut(s)	816, 1571, 1606
EcoT38I	GRGCYC	2 cut(s)	735, 1308
ErhI	CCWWGG	1 cut(s)	571
Esp3I	CGTCTC	1 cut(s)	12
FalI	AAGNNNNNCTT	2 cut(s)	1438, 1470
FaqI	GGGAC	1 cut(s)	1094
FauI	CCCGC	1 cut(s)	605
FbaI	TGATCA	1 cut(s)	1672
Fnu4HI	GCNGC	8 cut(s)	38, 65, 151, 257, 528, 857, 1266, 1345
FriOI	GRGCYC	2 cut(s)	735, 1308
Fsp4HI	GCNGC	8 cut(s)	38, 65, 151, 257, 528, 857, 1266, 1345
FspBI	CTAG	3 cut(s)	705, 1298, 1727
GluI	GCNGC	8 cut(s)	38, 65, 151, 257, 528, 857, 1266, 1345
GsuI	CTGGAG	2 cut(s)	71, 923
HaeIII	GGCC	1 cut(s)	1113
HapII	CCGG	1 cut(s)	1510
HgaI	GACGC	2 cut(s)	965, 1640
Hin1I	GRCGYC	1 cut(s)	648
HindIII	AAGCTT	2 cut(s)	1034, 1088
HinfI	GANTC	7 cut(s)	31, 335, 506, 604, 1190, 1474, 1502
HpaII	CCGG	1 cut(s)	1510
HphI	GGTGA	3 cut(s)	631, 1072, 1278
Hpy166II	GTNNAC	1 cut(s)	263
Hpy188III	TCNNGA	2 cut(s)	874, 943
Hpy8I	GTNNAC	1 cut(s)	263
HpyAV	CCTTC	6 cut(s)	175, 955, 1381, 1527, 1658, 1699
HpyCH4III	ACNGT	4 cut(s)	25, 520, 634, 1246
HpyCH4IV	ACGT	1 cut(s)	648
HpyF10VI	GCNNNNNNNGC	5 cut(s)	46, 115, 170, 1033, 1487
HpyF3I	CTNAG	3 cut(s)	1373, 1531, 1609
HpySE526I	ACGT	1 cut(s)	648
Hsp92I	GRCGYC	1 cut(s)	648
Ksp22I	TGATCA	1 cut(s)	1672
Kzo9I	GATC	9 cut(s)	340, 656, 701, 920, 1104, 1249, 1357, 1656, 1672
LmnI	GCTCC	2 cut(s)	664, 1462
Lsp1109I	GCAGC	7 cut(s)	49, 51, 137, 243, 868, 1252, 1356
LweI	GCATC	7 cut(s)	36, 162, 415, 514, 801, 1556, 1591
MabI	ACCWGGT	1 cut(s)	1641
MaeI	CTAG	3 cut(s)	705, 1298, 1727
MaeII	ACGT	1 cut(s)	648
MaeIII	GTNAC	3 cut(s)	142, 1273, 1284
MalI	GATC	9 cut(s)	342, 658, 703, 922, 1106, 1251, 1359, 1658, 1674
MboI	GATC	9 cut(s)	340, 656, 701, 920, 1104, 1249, 1357, 1656, 1672
MboII	GAAGA	8 cut(s)	293, 480, 487, 965, 1511, 1637, 1640, 1744
MfeI	CAATTG	1 cut(s)	1466
MflI	RGATCY	3 cut(s)	701, 920, 1104
MhlI	GDGCHC	4 cut(s)	120, 265, 735, 1308
MluCI	AATT	9 cut(s)	285, 446, 510, 1051, 1145, 1349, 1367, 1441, 1466
MlyI	GAGTC	2 cut(s)	329, 515
Mph1103I	ATGCAT	3 cut(s)	816, 1571, 1606
MroXI	GAANNNNTTC	3 cut(s)	545, 839, 1172
MseI	TTAA	7 cut(s)	267, 420, 458, 513, 864, 1440, 1445
MslI	CAYNNNNRTG	3 cut(s)	1218, 1407, 1574
MspA1I	CMGCKG	1 cut(s)	1261
MspI	CCGG	1 cut(s)	1510
MspR9I	CCNGG	5 cut(s)	925, 1102, 1118, 1335, 1643
MunI	CAATTG	1 cut(s)	1466
Mva1269I	GAATGC	1 cut(s)	592
MvaI	CCWGG	5 cut(s)	925, 1102, 1118, 1335, 1643
MvnI	CGCG	2 cut(s)	959, 1651
MwoI	GCNNNNNNNGC	5 cut(s)	46, 115, 170, 1033, 1487
NdeII	GATC	9 cut(s)	340, 656, 701, 920, 1104, 1249, 1357, 1656, 1672
NmeAIII	GCCGAG	1 cut(s)	1046
NmuCI	GTSAC	1 cut(s)	1284
NsiI	ATGCAT	3 cut(s)	816, 1571, 1606
NspI	RCATGY	4 cut(s)	1396, 1406, 1559, 1608
PaeI	GCATGC	3 cut(s)	1396, 1559, 1608
PagI	TCATGA	1 cut(s)	873
PctI	GAATGC	1 cut(s)	592
PdmI	GAANNNNTTC	3 cut(s)	545, 839, 1172
PfeI	GAWTC	5 cut(s)	31, 604, 1190, 1474, 1502
PflFI	GACNNNGTC	1 cut(s)	1643
PflMI	CCANNNNNTGG	2 cut(s)	1223, 1261
PfoI	TCCNGGA	1 cut(s)	1116
PinAI	ACCGGT	1 cut(s)	1509
PkrI	GCNGC	8 cut(s)	39, 66, 152, 258, 529, 858, 1267, 1346
PleI	GAGTC	2 cut(s)	329, 514
PpsI	GAGTC	2 cut(s)	329, 514
PshBI	ATTAAT	1 cut(s)	1440
Psp124BI	GAGCTC	1 cut(s)	1308
Psp6I	CCWGG	5 cut(s)	923, 1100, 1116, 1333, 1641
PspEI	GGTNACC	1 cut(s)	1284
PspGI	CCWGG	5 cut(s)	923, 1100, 1116, 1333, 1641
PspPI	GGNCC	4 cut(s)	127, 346, 675, 1226
PstI	CTGCAG	2 cut(s)	39, 1270
PsuI	RGATCY	3 cut(s)	701, 920, 1104
PsyI	GACNNNGTC	1 cut(s)	1643
PvuII	CAGCTG	1 cut(s)	1261
RsaI	GTAC	9 cut(s)	82, 138, 227, 366, 372, 900, 1099, 1296, 1339
RsaNI	GTAC	9 cut(s)	81, 137, 226, 365, 371, 899, 1098, 1295, 1338
RseI	CAYNNNNRTG	3 cut(s)	1218, 1407, 1574
SacI	GAGCTC	1 cut(s)	1308
SaqAI	TTAA	7 cut(s)	267, 420, 458, 513, 864, 1440, 1445
SatI	GCNGC	8 cut(s)	38, 65, 151, 257, 528, 857, 1266, 1345
Sau3AI	GATC	9 cut(s)	340, 656, 701, 920, 1104, 1249, 1357, 1656, 1672
Sau96I	GGNCC	4 cut(s)	127, 346, 675, 1226
ScaI	AGTACT	4 cut(s)	138, 372, 900, 1296
SchI	GAGTC	2 cut(s)	329, 515
ScrFI	CCNGG	5 cut(s)	925, 1102, 1118, 1335, 1643
SduI	GDGCHC	4 cut(s)	120, 265, 735, 1308
SexAI	ACCWGGT	1 cut(s)	1641
SfaNI	GCATC	7 cut(s)	36, 162, 415, 514, 801, 1556, 1591
SfcI	CTRYAG	2 cut(s)	35, 1266
SinI	GGWCC	4 cut(s)	127, 346, 675, 1226
SmiMI	CAYNNNNRTG	3 cut(s)	1218, 1407, 1574
SmlI	CTYRAG	2 cut(s)	479, 1397
SmoI	CTYRAG	2 cut(s)	479, 1397
SpeI	ACTAGT	1 cut(s)	1297
SphI	GCATGC	3 cut(s)	1396, 1559, 1608
Sse9I	AATT	9 cut(s)	285, 446, 510, 1051, 1145, 1349, 1367, 1441, 1466
SsiI	CCGC	6 cut(s)	297, 528, 590, 612, 758, 1282
SspMI	CTAG	3 cut(s)	705, 1298, 1727
SstI	GAGCTC	1 cut(s)	1308
StyD4I	CCNGG	5 cut(s)	923, 1100, 1116, 1333, 1641
StyI	CCWWGG	1 cut(s)	571
TaaI	ACNGT	4 cut(s)	25, 520, 634, 1246
TaiI	ACGT	1 cut(s)	651
TaqI	TCGA	6 cut(s)	549, 729, 942, 1302, 1583, 1695
TasI	AATT	9 cut(s)	285, 446, 510, 1051, 1145, 1349, 1367, 1441, 1466
TatI	WGTACW	6 cut(s)	136, 225, 364, 370, 898, 1294
TauI	GCSGC	1 cut(s)	530
TfiI	GAWTC	5 cut(s)	31, 604, 1190, 1474, 1502
Tru1I	TTAA	7 cut(s)	267, 420, 458, 513, 864, 1440, 1445
Tru9I	TTAA	7 cut(s)	267, 420, 458, 513, 864, 1440, 1445
TscAI	CASTG	1 cut(s)	760
TseFI	GTSAC	1 cut(s)	1284
TseI	GCWGC	7 cut(s)	37, 64, 150, 256, 856, 1265, 1344
Tsp45I	GTSAC	1 cut(s)	1284
TspGWI	ACGGA	2 cut(s)	423, 1202
TspRI	CASTG	1 cut(s)	760
Tth111I	GACNNNGTC	1 cut(s)	1643
Van91I	CCANNNNNTGG	2 cut(s)	1223, 1261
VneI	GTGCAC	1 cut(s)	261
VpaK11BI	GGWCC	4 cut(s)	127, 346, 675, 1226
VspI	ATTAAT	1 cut(s)	1440
XapI	RAATTY	3 cut(s)	285, 446, 1145
XceI	RCATGY	4 cut(s)	1396, 1406, 1559, 1608
XmnI	GAANNNNTTC	3 cut(s)	545, 839, 1172
XspI	CTAG	3 cut(s)	705, 1298, 1727
ZraI	GACGTC	1 cut(s)	649
ZrmI	AGTACT	4 cut(s)	138, 372, 900, 1296
Zsp2I	ATGCAT	3 cut(s)	816, 1571, 1606

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.