Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0000657

Physical Location & Seq

Genomic Coordinates Forward (+)

15100997 .. 15103184

Gene Structure 2188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G014900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGTGGTATTTCATCCTCTGGGCTGATCTGTTTCCAATGGTTGATGTTTTCCTCCAGATGCGATGGGCCGTTGGTTTCCTCGAGAAGAAGAAATTATGCGCCAGCATCTGTAGATCACTGGAGCACACGAGGTCCAAAGTTCGAAGTCTGCAGGACAGATGTTATGTTGATGAATCCAAACATCAATCTGTCAAGTACAAAGCATCACCTGATGGCTTAAGAGCTGACGTTTTGATTTCCCCTCTTAGCAACTTGGATCCTAATACAGATGGCGAAGGCATCGTCATAATGCATTTACAACAAGTGCATGCTTTCATGGAGGATCTACACCAGCTCAAACTGCTAACTGCAAGGGAAGTGTCATGGGCGAGGAAAGCAAACAAGACTCTTGACAAAACAAAGGATGCCGTTGCCACCATAATCAAGAGAAGAGAAAATCAGAGAAGGTGGTTCTCATCTGTCACTAACTGGGGGGAGGAGGAGAAACTTAAGGCGGACATAGCGTACATTCGGAGCAGGGTACCTAACCTCCTGGAAACGAAGGAAAGATATGGTATCAAATTTATCAGACGAGGCGCATTAAAATCTAATCCCCGATCTCCTCAACAGCATAACTTGCAGAATCATACTCCAGATCCTGATACGGACTTGTCCTCCCATGTGACCAGCATTCATAATTGGCTGAATCAATTGCCAGCTCGAGCAGCAAAAAAGTTGGAACATGAGATCAGCTTGCTGAGAGATGAGTTGGGCCACATGCATAGACTGTTGAAACATAAAAATGCGGCTATATATGCTAGCAAGGTTAGAAATGCTTGCTTGGAGCAATTGAAGAAAATGGCCGCGGAAGCAAAGCAGTATTCAGAAACCCAAATGGAATTTTCAGAGAACTCAAAGCATGTGTCCGACATCAAGAGAATCATTGTTCTCCTTCAGAGATTCAGTCAAGCATATTCCATTGAAAAGGAGCAACCATGCTATGCAGTTGGTTTGGAAGAAGACACACATAAACTGGTCTTACGGCTGACAGACCCTGGTAGAGAGATCATTTCCATTGGAGGCATGAAGGGCATTGGTAAGACAACTCTGGCAAACAAAGTCTATCACCACGGTACCATTGCAAGCCATTTTAAACTCCGACGATGGGTATCTCTACCTCATCAAGGGCACGAGGAAATAGTTTTAAGAAGACTTGAAAAGAGTGAAGAGAAACAGAGTGGAAAGGACTGGGACAAGAATGTGCATGATGATCTCTTGAAGAAGGAGAAATACCTTCTACTTTTGGACAATGTCTCATCACAAGAAGTCTTGGATGATCTCAAACAGGAGATACTCCCAGCGATGGCAGAGGGGAGCAAGATTTTAGTAACCACAAACCACTTGGCTGGCGCTAATCAAAATAGCACTCACTACCCACTTCGGCTACGAACGCAAAAAGAAAGCTGGGAGTTTTTCATCGAGAACGACGAGGAAGATTTGTTTTTTTGGAAATCAAGAAAAATCATCGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009506 GO:0009626 GO:0009987 GO:0012501 GO:0016020 GO:0019897 GO:0019898 GO:0023052 GO:0030054 GO:0033554 GO:0034050 GO:0036094 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0071944 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 NB-ARC

Protein Analysis

503

Amino Acids

58.4

Weight (kDa)

9.2

Isoelectric Point (pI)

52.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	333 - 486	2.5e-21	NB-ARC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000657)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g34770
malus_domestica	MD17G1025700.v1.1
prunus_persica	Prupe.3G040600_v2.0.a1 Prupe.3G040800_v2.0.a1 Prupe.3G041000_v2.0.a1 Prupe.3G041100_v2.0.a1 Prupe.3G041500_v2.0.a1 Prupe.4G109400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037700_v2.0.a1
pyrus_communis	pycom09g10040 pycom17g16000
rosa_chinensis	RchiOBHm_Chr2g0145591 RchiOBHm_Chr2g0145611
rosa_laevigata	RLG00000020146 RLG00000020149 RLG00000020151 RLG00000020154
rosa_multiflora	Rmu_co7986250.1_g000001 Rmu_co8305779.1_g000001 Rmu_sc0002718.1_g000011 Rmu_sc0002835.1_g000009 Rmu_sc0002835.1_g000016 Rmu_sc0003046.1_g000007 Rmu_sc0003046.1_g000010 Rmu_sc0004445.1_g000006 Rmu_sc0004810.1_g000002 Rmu_sc0006477.1_g000008 Rmu_sc0014329.1_g000001 Rmu_sc0020976.1_g000003 Rmu_sc0021168.1_g000001 Rmu_sc0022199.1_g000001 Rmu_sc0036991.1_g000001 Rmu_sc0041497.1_g000003
rosa_roxburghii	Rroxscaffold_152G00434560 Rroxscaffold_152G00434570 Rroxscaffold_152G00434600 Rroxscaffold_152G00434610 Rroxscaffold_2G00100630 Rroxscaffold_2G00100640 Rroxscaffold_2G00100660 Rroxscaffold_2G00100670 Rroxscaffold_2G00100680 Rroxscaffold_2G00100690
rosa_rugosa	Rorug02G0392300 Rorug02G0392400 Rorug02G0392400
rosa_samantha	Rh2AG445700 Rh2AG445800 Rh2AG446000 Rh2AG446100 Rh2AG446300 Rh2AG446600 Rh2BG457400 Rh2BG457500 Rh2BG457600 Rh2BG457900 Rh2BG458300 Rh2CG432300 Rh2CG432400 Rh2CG432500 Rh2CG432700 Rh2CG432900 Rh2CG433000 Rh2CG433300 Rh2DG467100 Rh2DG467200 Rh2DG467300 Rh2DG467600 Rh2DG467900 Rh3DG194100
rosa_wichuraiana	Rw2G036420 Rw2G036450 Rw2G036470 Rw3G014900 Rw3G014920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	520, 1112
AccB1I	GGYRCC	2 cut(s)	520, 1112
AccII	CGCG	1 cut(s)	845
AciI	CCGC	4 cut(s)	494, 785, 843, 845
AclWI	GGATC	4 cut(s)	251, 264, 330, 629
AcoI	YGGCCR	1 cut(s)	840
AcsI	RAATTY	2 cut(s)	560, 878
AcuI	CTGAAG	1 cut(s)	917
AfaI	GTAC	4 cut(s)	197, 506, 522, 1114
AfiI	CCNNNNNNNGG	3 cut(s)	1144, 1163, 1342
AflII	CTTAAG	2 cut(s)	217, 488
AgsI	TTSAA	5 cut(s)	772, 832, 962, 1196, 1258
AjnI	CCWGG	2 cut(s)	531, 1033
AluBI	AGCT	5 cut(s)	224, 334, 698, 732, 1443
AluI	AGCT	5 cut(s)	224, 334, 698, 732, 1443
Alw21I	GWGCWC	1 cut(s)	126
Alw26I	GTCTC	1 cut(s)	1297
AlwI	GGATC	4 cut(s)	251, 264, 330, 629
AlwNI	CAGNNNCTG	3 cut(s)	108, 638, 1034
Ama87I	CYCGRG	2 cut(s)	80, 699
AoxI	GGCC	3 cut(s)	66, 751, 840
ApeKI	GCWGC	1 cut(s)	704
ApoI	RAATTY	2 cut(s)	560, 878
ArsI	GACNNNNNNTTYG	4 cut(s)	267, 299, 887, 919
Asp718I	GGTACC	2 cut(s)	520, 1112
AspLEI	GCGC	3 cut(s)	101, 578, 1391
AspS9I	GGNCC	3 cut(s)	66, 132, 751
AsuHPI	GGTGA	2 cut(s)	198, 1097
AsuII	TTCGAA	1 cut(s)	142
AsuNHI	GCTAGC	1 cut(s)	797
AvaI	CYCGRG	2 cut(s)	80, 699
AvaII	GGWCC	1 cut(s)	132
BaeGI	GKGCMC	1 cut(s)	1170
BaeI	ACNNNNGTAYC	2 cut(s)	1096, 1129
BamHI	GGATCC	1 cut(s)	256
BanI	GGYRCC	2 cut(s)	520, 1112
BarI	GAAGNNNNNNTAC	2 cut(s)	1253, 1285
BauI	CACGAG	2 cut(s)	127, 1169
BbsI	GAAGAC	2 cut(s)	1005, 1195
Bbv12I	GWGCWC	1 cut(s)	126
BbvI	GCAGC	1 cut(s)	716
BccI	CCATC	5 cut(s)	57, 206, 263, 1137, 1336
BceAI	ACGGC	3 cut(s)	53, 392, 1037
BciT130I	CCWGG	2 cut(s)	533, 1035
BcoDI	GTCTC	1 cut(s)	1297
BfaI	CTAG	1 cut(s)	798
BfmI	CTRYAG	2 cut(s)	109, 149
BfoI	RGCGCY	1 cut(s)	1392
BfrI	CTTAAG	2 cut(s)	217, 488
BisI	GCNGC	3 cut(s)	705, 786, 843
BlsI	GCNGC	3 cut(s)	706, 787, 844
Bme1390I	CCNGG	2 cut(s)	533, 1035
Bme18I	GGWCC	1 cut(s)	132
BmeT110I	CYCGRG	2 cut(s)	80, 699
BmgT120I	GGNCC	3 cut(s)	66, 132, 751
BmiI	GGNNCC	3 cut(s)	258, 522, 1114
BmrFI	CCNGG	2 cut(s)	533, 1035
BmrI	ACTGGG	2 cut(s)	478, 1237
BmsI	GCATC	5 cut(s)	48, 114, 212, 288, 394
BmtI	GCTAGC	1 cut(s)	801
BmuI	ACTGGG	2 cut(s)	478, 1237
BpiI	GAAGAC	2 cut(s)	1005, 1195
BpmI	CTGGAG	3 cut(s)	38, 140, 615
Bpu14I	TTCGAA	1 cut(s)	142
BsaBI	GATNNNNATC	1 cut(s)	1147
BsaJI	CCNNGG	3 cut(s)	843, 1033, 1108
BsaXI	ACNNNNNCTCC	4 cut(s)	513, 543, 638, 668
Bsc4I	CCNNNNNNNGG	3 cut(s)	1144, 1163, 1342
Bse1I	ACTGG	4 cut(s)	123, 473, 1017, 1232
Bse3DI	GCAATG	1 cut(s)	1116
Bse8I	GATNNNNATC	1 cut(s)	1147
BseBI	CCWGG	2 cut(s)	533, 1035
BseDI	CCNNGG	3 cut(s)	843, 1033, 1108
BseGI	GGATG	3 cut(s)	12, 409, 1318
BseJI	GATNNNNATC	1 cut(s)	1147
BseLI	CCNNNNNNNGG	3 cut(s)	1144, 1163, 1342
BseMI	GCAATG	1 cut(s)	1116
BseMII	CTCAG	1 cut(s)	728
BseNI	ACTGG	4 cut(s)	123, 473, 1017, 1232
BseRI	GAGGAG	3 cut(s)	491, 494, 591
BseSI	GKGCMC	1 cut(s)	1170
BseXI	GCAGC	1 cut(s)	716
BseYI	CCCAGC	2 cut(s)	1336, 1443
Bsh1236I	CGCG	1 cut(s)	845
BshFI	GGCC	3 cut(s)	68, 753, 842
BshNI	GGYRCC	2 cut(s)	520, 1112
BsiHKAI	GWGCWC	1 cut(s)	126
BsiHKCI	CYCGRG	2 cut(s)	80, 699
BslFI	GGGAC	1 cut(s)	1244
BslI	CCNNNNNNNGG	3 cut(s)	1144, 1163, 1342
BsmAI	GTCTC	1 cut(s)	1297
BsmFI	GGGAC	1 cut(s)	1244
BsmI	GAATGC	1 cut(s)	669
BsnI	GGCC	3 cut(s)	68, 753, 842
BsoBI	CYCGRG	2 cut(s)	80, 699
Bsp119I	TTCGAA	1 cut(s)	142
Bsp1286I	GDGCHC	2 cut(s)	126, 1170
BspACI	CCGC	4 cut(s)	494, 785, 843, 845
BspANI	GGCC	3 cut(s)	68, 753, 842
BspCNI	CTCAG	1 cut(s)	729
BspFNI	CGCG	1 cut(s)	845
BspLI	GGNNCC	3 cut(s)	258, 522, 1114
BspMAI	CTGCAG	1 cut(s)	153
BspOI	GCTAGC	1 cut(s)	801
BspPI	GGATC	4 cut(s)	251, 264, 330, 629
BspT104I	TTCGAA	1 cut(s)	142
BspT107I	GGYRCC	2 cut(s)	520, 1112
BspTI	CTTAAG	2 cut(s)	217, 488
BsrDI	GCAATG	1 cut(s)	1116
BsrI	ACTGG	4 cut(s)	123, 473, 1017, 1232
BssECI	CCNNGG	3 cut(s)	843, 1033, 1108
BssSI	CACGAG	2 cut(s)	127, 1169
Bst2BI	CACGAG	2 cut(s)	127, 1169
Bst2UI	CCWGG	2 cut(s)	533, 1035
Bst4CI	ACNGT	2 cut(s)	768, 1112
Bst6I	CTCTTC	2 cut(s)	424, 1200
BstAFI	CTTAAG	2 cut(s)	217, 488
BstAPI	GCANNNNNTGC	1 cut(s)	616
BstBI	TTCGAA	1 cut(s)	142
BstC8I	GCNNGC	8 cut(s)	103, 309, 696, 734, 799, 817, 1123, 1387
BstDEI	CTNAG	2 cut(s)	245, 737
BstDSI	CCRYGG	2 cut(s)	843, 1108
BstENI	CCTNNNNNAGG	1 cut(s)	1161
BstF5I	GGATG	3 cut(s)	12, 409, 1318
BstFNI	CGCG	1 cut(s)	845
BstH2I	RGCGCY	1 cut(s)	1392
BstHHI	GCGC	3 cut(s)	101, 578, 1391
BstMAI	GTCTC	1 cut(s)	1297
BstMWI	GCNNNNNNNGC	9 cut(s)	340, 374, 500, 616, 704, 794, 848, 1068, 1429
BstNI	CCWGG	2 cut(s)	533, 1035
BstNSI	RCATGY	3 cut(s)	311, 760, 902
BstSCI	CCNGG	2 cut(s)	531, 1033
BstSFI	CTRYAG	2 cut(s)	109, 149
BstSLI	GKGCMC	1 cut(s)	1170
BstUI	CGCG	1 cut(s)	845
BstV1I	GCAGC	1 cut(s)	716
BstV2I	GAAGAC	2 cut(s)	1005, 1195
BstX2I	RGATCY	3 cut(s)	256, 322, 634
BstXI	CCANNNNNNTGG	1 cut(s)	1385
BstYI	RGATCY	3 cut(s)	256, 322, 634
BsuRI	GGCC	3 cut(s)	68, 753, 842
BtgI	CCRYGG	2 cut(s)	843, 1108
BtgZI	GCGATG	2 cut(s)	76, 1355
BtsCI	GGATG	3 cut(s)	12, 409, 1318
BtsIMutI	CAGTG	1 cut(s)	116
Cac8I	GCNNGC	8 cut(s)	103, 309, 696, 734, 799, 817, 1123, 1387
CaiI	CAGNNNCTG	3 cut(s)	108, 638, 1034
CfoI	GCGC	3 cut(s)	101, 578, 1391
Cfr13I	GGNCC	3 cut(s)	66, 132, 751
Cfr42I	CCGCGG	1 cut(s)	846
Csp6I	GTAC	4 cut(s)	196, 505, 521, 1113
CviQI	GTAC	4 cut(s)	196, 505, 521, 1113
DdeI	CTNAG	2 cut(s)	245, 737
DraI	TTTAAA	1 cut(s)	1132
EaeI	YGGCCR	1 cut(s)	840
Eam1104I	CTCTTC	2 cut(s)	424, 1200
EarI	CTCTTC	2 cut(s)	424, 1200
EciI	GGCGGA	1 cut(s)	509
Eco47I	GGWCC	1 cut(s)	132
Eco57I	CTGAAG	1 cut(s)	917
Eco88I	CYCGRG	2 cut(s)	80, 699
EcoNI	CCTNNNNNAGG	1 cut(s)	1161
EcoRII	CCWGG	2 cut(s)	531, 1033
EcoT22I	ATGCAT	2 cut(s)	294, 762
FaqI	GGGAC	1 cut(s)	1244
Fnu4HI	GCNGC	3 cut(s)	705, 786, 843
FokI	GGATG	2 cut(s)	416, 1325
Fsp4HI	GCNGC	3 cut(s)	705, 786, 843
FspBI	CTAG	1 cut(s)	798
GlaI	GCGC	3 cut(s)	100, 577, 1390
GluI	GCNGC	3 cut(s)	705, 786, 843
GsaI	CCCAGC	2 cut(s)	1340, 1447
GsuI	CTGGAG	3 cut(s)	38, 140, 615
HaeII	RGCGCY	1 cut(s)	1392
HaeIII	GGCC	3 cut(s)	68, 753, 842
HhaI	GCGC	3 cut(s)	101, 578, 1391
Hin6I	GCGC	3 cut(s)	99, 576, 1389
HinP1I	GCGC	3 cut(s)	99, 576, 1389
HinfI	GANTC	6 cut(s)	173, 385, 622, 685, 918, 939
HphI	GGTGA	2 cut(s)	198, 1097
Hpy188I	TCNGA	8 cut(s)	441, 513, 569, 865, 886, 907, 936, 1139
Hpy99I	CGWCG	2 cut(s)	1143, 1469
HpyAV	CCTTC	7 cut(s)	269, 438, 535, 941, 1060, 1255, 1283
HpyCH4III	ACNGT	2 cut(s)	768, 1112
HpyCH4IV	ACGT	1 cut(s)	228
HpyCH4V	TGCA	9 cut(s)	151, 292, 307, 350, 619, 760, 983, 1121, 1243
HpyF10VI	GCNNNNNNNGC	9 cut(s)	340, 374, 500, 616, 704, 794, 848, 1068, 1429
HpyF3I	CTNAG	2 cut(s)	245, 737
HpySE526I	ACGT	1 cut(s)	228
HspAI	GCGC	3 cut(s)	99, 576, 1389
KpnI	GGTACC	2 cut(s)	524, 1116
KspI	CCGCGG	1 cut(s)	846
LmnI	GCTCC	5 cut(s)	121, 513, 823, 967, 1353
Lsp1109I	GCAGC	1 cut(s)	716
LweI	GCATC	5 cut(s)	48, 114, 212, 288, 394
MaeI	CTAG	1 cut(s)	798
MaeII	ACGT	1 cut(s)	228
MaeIII	GTNAC	3 cut(s)	460, 661, 1366
MfeI	CAATTG	2 cut(s)	689, 827
MflI	RGATCY	3 cut(s)	256, 322, 634
MhlI	GDGCHC	2 cut(s)	126, 1170
MluCI	AATT	6 cut(s)	92, 560, 676, 689, 827, 878
MlyI	GAGTC	1 cut(s)	379
MmeI	TCCRAC	3 cut(s)	696, 930, 1162
Mph1103I	ATGCAT	2 cut(s)	294, 762
MseI	TTAA	5 cut(s)	218, 489, 581, 1131, 1184
MslI	CAYNNNNRTG	1 cut(s)	780
MspA1I	CMGCKG	1 cut(s)	845
MspCI	CTTAAG	2 cut(s)	217, 488
MspR9I	CCNGG	2 cut(s)	533, 1035
MunI	CAATTG	2 cut(s)	689, 827
Mva1269I	GAATGC	1 cut(s)	669
MvaI	CCWGG	2 cut(s)	533, 1035
MvnI	CGCG	1 cut(s)	845
MwoI	GCNNNNNNNGC	9 cut(s)	340, 374, 500, 616, 704, 794, 848, 1068, 1429
NheI	GCTAGC	1 cut(s)	797
NlaIV	GGNNCC	3 cut(s)	258, 522, 1114
NmuCI	GTSAC	2 cut(s)	460, 661
NsiI	ATGCAT	2 cut(s)	294, 762
NspI	RCATGY	3 cut(s)	311, 760, 902
NspV	TTCGAA	1 cut(s)	142
PaeI	GCATGC	1 cut(s)	311
PaeR7I	CTCGAG	2 cut(s)	80, 699
PcsI	WCGNNNNNNNCGW	1 cut(s)	1464
PctI	GAATGC	1 cut(s)	669
PfeI	GAWTC	5 cut(s)	173, 622, 685, 918, 939
PflFI	GACNNNGTC	1 cut(s)	1289
PfoI	TCCNGGA	1 cut(s)	531
PkrI	GCNGC	3 cut(s)	706, 787, 844
PleI	GAGTC	1 cut(s)	379
PpsI	GAGTC	1 cut(s)	379
Psp6I	CCWGG	2 cut(s)	531, 1033
PspFI	CCCAGC	2 cut(s)	1336, 1443
PspGI	CCWGG	2 cut(s)	531, 1033
PspN4I	GGNNCC	3 cut(s)	258, 522, 1114
PspPI	GGNCC	3 cut(s)	66, 132, 751
PspXI	VCTCGAGB	1 cut(s)	699
PstI	CTGCAG	1 cut(s)	153
PstNI	CAGNNNCTG	3 cut(s)	108, 638, 1034
PsuI	RGATCY	3 cut(s)	256, 322, 634
PsyI	GACNNNGTC	1 cut(s)	1289
RsaI	GTAC	4 cut(s)	197, 506, 522, 1114
RsaNI	GTAC	4 cut(s)	196, 505, 521, 1113
RseI	CAYNNNNRTG	1 cut(s)	780
SacII	CCGCGG	1 cut(s)	846
SaqAI	TTAA	5 cut(s)	218, 489, 581, 1131, 1184
SatI	GCNGC	3 cut(s)	705, 786, 843
Sau96I	GGNCC	3 cut(s)	66, 132, 751
SchI	GAGTC	1 cut(s)	379
ScrFI	CCNGG	2 cut(s)	533, 1035
SduI	GDGCHC	2 cut(s)	126, 1170
SfaNI	GCATC	5 cut(s)	48, 114, 212, 288, 394
SfcI	CTRYAG	2 cut(s)	109, 149
Sfr274I	CTCGAG	2 cut(s)	80, 699
Sfr303I	CCGCGG	1 cut(s)	846
SfuI	TTCGAA	1 cut(s)	142
SgrBI	CCGCGG	1 cut(s)	846
SinI	GGWCC	1 cut(s)	132
SlaI	CTCGAG	2 cut(s)	80, 699
SmiMI	CAYNNNNRTG	1 cut(s)	780
SmlI	CTYRAG	4 cut(s)	80, 217, 488, 699
SmoI	CTYRAG	4 cut(s)	80, 217, 488, 699
SphI	GCATGC	1 cut(s)	311
Sse9I	AATT	6 cut(s)	92, 560, 676, 689, 827, 878
SsiI	CCGC	4 cut(s)	494, 785, 843, 845
SspMI	CTAG	1 cut(s)	798
StyD4I	CCNGG	2 cut(s)	531, 1033
TaaI	ACNGT	2 cut(s)	768, 1112
TaiI	ACGT	1 cut(s)	231
TaqI	TCGA	4 cut(s)	81, 142, 700, 1458
TasI	AATT	6 cut(s)	92, 560, 676, 689, 827, 878
TatI	WGTACW	1 cut(s)	195
TauI	GCSGC	2 cut(s)	788, 845
TfiI	GAWTC	5 cut(s)	173, 622, 685, 918, 939
Tru1I	TTAA	5 cut(s)	218, 489, 581, 1131, 1184
Tru9I	TTAA	5 cut(s)	218, 489, 581, 1131, 1184
TscAI	CASTG	1 cut(s)	123
TseFI	GTSAC	2 cut(s)	460, 661
TseI	GCWGC	1 cut(s)	704
Tsp45I	GTSAC	2 cut(s)	460, 661
TspDTI	ATGAA	5 cut(s)	186, 304, 662, 1079, 1444
TspGWI	ACGGA	1 cut(s)	659
TspRI	CASTG	1 cut(s)	123
Tth111I	GACNNNGTC	1 cut(s)	1289
Vha464I	CTTAAG	2 cut(s)	217, 488
VpaK11BI	GGWCC	1 cut(s)	132
XagI	CCTNNNNNAGG	1 cut(s)	1161
XapI	RAATTY	2 cut(s)	560, 878
XceI	RCATGY	3 cut(s)	311, 760, 902
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1378
XhoI	CTCGAG	2 cut(s)	80, 699
XspI	CTAG	1 cut(s)	798
Zsp2I	ATGCAT	2 cut(s)	294, 762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.