RchiOBHm_Chr2g0145591

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
63341621 .. 63344521
2901 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51544

Sequence Viewer

Length: 2901 bp
ATGCATTTACAGCTACTTCATGCTTTCATGGAAGATGTTCACGGCCTCGAAGTGCTGGAAAGTGAAATGGAAAACACCTGGGTGATGGAAGCGAACGACACCATTAGTCAAGCGAAGGATGTGATTGACACCATAAATGCCACAGAAAACAAGAACAAGAGAGGATGGATTTCAGAACCGAATAACTGGATTCGTAGGTGGAAGCATAGGGAGGACATAGTGTCTGTTGGCACCCGGATCTCTGGCCTCCTCACAACAAAGGAAAGATTTGGTGTCAATTTCATCAAATTTATTGAGTCATCAAAATCTGCCCACCACTCTCCTAAGCACCAAGCCTTTCAGCATCCAACTGAACCTGATATTGGCTTGTCGGATGCAGTCAACAACATCCGTAACTTGCTCGATCAACTGCCAAAGACGAGCACCAAGTTAGTAGCTCAAGTCAGCAAAGTGAATGAGGAGTTGGATAAACTTTTAGAACATACAAAGGAAACTGAAGAGTATGCTGTGAATCTGAGAAATGCTTCCTGGAAGCTGTTGAAGAAAACCGCTTCAGAAGCAAACGAGCAGTACCAGAAAACCGCTTCTAAGTTTCTATCAAAAACAATACTTGTTCGCATCAAGAATGCTGTCAATGTTCTTGAGAGATGCCTGAAAGTATATTCCATTGACGCAAGGGAGGAGTCATGCTCAGTATTTGGTTTGGACGAAGACATACACGAACTGGTCTCGAGACTCACTACTAATAGTGAACCTGCTAGTTCTATCATACCCATTGTGGGGATGAAGGGCATAGGTAAGACTACTCTAGCCAAGCATGTTTACTACCATGCTAACATTGTGAAGCACTTTCCAGTCCGTCGTTGGGTATCCCTACCTCCATACCAAAACTCTGATGAATTTGCATTTTTAAGAAGTGTTGGGATCCAGGTCCGGGAGACCAAAGAGAAGTATTCGAATGCATACGAATCAAAAGCCTACTGGATCAACAGAGTGCGCAATTTCTTGAACATGAAAATGTTCCTTTTAGTATTGGACAATGTCGTGTCCATGGAAGTCTGGGATTCTCTCAAACAAGCACTGCCAGAAAGGACTAAAGGGAGCAAGATTGTGCTGATCACACGCAACAAGGCAATTGCTTTAAATGCTGACCGAGATAGCATTCCTCACCAACTGAGGCTACGAACTCAAGAAGAGAGCTGGGAGCTTTTCTCTCAGATAGTGCTAGTGCAGTACAATGATCCCGAGAAAAAGGAAACCAATCGTGTGAAAGAAGTTGTAGGAAGCAGCTTTGGAGGCTTACCACTTGACATTATAGCCTCTGGCAGTTTACTTTGGGGGAAACAAATCACAGCCGAAGAAATTTTGAGGGTTCTTGGACGTAGCACTACTCAAGGACAGGACCAAAATCCTTGGTCACTGAACAAGGCAGTAAATGAAGACGACTTGCAAGAGAATCAGAGTTTTAGGCACTGTTTGTCTTACTTCCAGCTCTTCCCGCCGGACTTTGAAATCCCTGTCAGGAGAATAGTGGCTTGGTGGGTTGCACGAGAGCTGGAAGGAATCAATGAGAATCATATTCCTGAAAACTGGGTTACTCAAAGGTTGAGACAAGTTAATGAGATTCGTATTCCTGAAACTCTTGCGAATGAGTATCTACAAGAGTTGATCGGCCGTAACATGATTCAAGTAGTCAAGAAAAAGCCTGATGGGAAAGCCAAGACATGTCGATTGCCTAGTTCTATGGGAGCTCTGTTGTTGCAAGGCCAAGGCGTTAATAGCAGCGAAACTGATCCCTCTGAATCATCTCCTGATCAAGATAATGGTCCTACCGGAACAAATACACAGCAGAATGAAAGCGAACACAAGTCCATTATCTTCTTCGAGACTGTAGAGCGAAATAAACCGAATCAAGAAATATGTGACTTCCTACGCAAAGGCATTGCTGATGGTTTCTTGGGACAGCTACAATTTCTTGACCTTGAACGTGTATTCCAACCACTGTTGCCGAACGCCATCGGAAATTTAAAGCGGCTGGTATATCTGGGCTTAAGGTGGACTTACCTTGAGTCGATTCCAAAATCAATTGGCAAGTTGGTCGAACTCCAGACCCTTGATTTGAAGCATACTTACATTCAGCACAATCTTCCTAGTTCAATCTGGAAACTGAAGAAACTTCGGTATCTCTACTTAAATCACAACTGTCAATTGCCACAATTGACTCGGTTGATATTATTGCCTCGATCAAATACCATTGGCATGAAGGATCTGCAGAAATTGTCTGGTGTGTTTGTGGATAATGTAAATCTGGTTAAGGATGGGCTTGGAAAGTTGATCAACCTTAGAAAATTGGAGTTGGCATTCCAGCTTGACACTTCGGACGAGCAAGATGTAGTGGAAAGTTGGATTGCGAAGCTCAAGTTCTTAGAGTCTTTGAAGTTGAAATCAATTGATAAGAAGAGGAAACTTCGGGATCTGAAATTACAGTTTCTCCCAACCCTTGAGCTACTGTCCCGGTTACATTTGTTTGGAAAGCTTGTAAATCGACAAATCATCAACCAAGTTCCACAAAGCCTAACTCATCTTACCCTCTCTGCCTCTGAAATCGAAGACGATCCAATGCCGGTGCTAGGCACGCTTCAGAATCTCATATCGCTATCTTTCTACTCTGGTTCTTATCTTGGAAGACGCATGGTTTGCCGCATGAATGGGTTTCCGAAGCTTGTAGTTCTGAAGCTTTGTAAGCTTGCTGCCCTGGAAATATTGGATTTGCAAGAAGCAATGCCAAAGCTAAGCAATTTAGTGATTAAATATTCCAAGAAGCCCAAAGTGACTGTTGTTGGATTGACGCGTTTAACCACCGTCCAAGAATTTGAACAATCAGCTGCAGCCGAGGAATAA

Protein Analysis

966

Amino Acids

110.51

Weight (kDa)

8.87

Isoelectric Point (pI)

42.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 237 - 409 4e-31 NB-ARC domain
LRR_14 PF23598 657 - 955 2.6e-35 Leucine-rich repeat region
LRR_8 PF13855 678 - 734 1.6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000657)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g34770
malus_domestica MD17G1025700.v1.1
prunus_persica Prupe.3G040600_v2.0.a1 Prupe.3G040800_v2.0.a1 Prupe.3G041000_v2.0.a1 Prupe.3G041100_v2.0.a1 Prupe.3G041500_v2.0.a1 Prupe.4G109400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037700_v2.0.a1
pyrus_communis pycom09g10040 pycom17g16000
rosa_chinensis RchiOBHm_Chr2g0145591 RchiOBHm_Chr2g0145611
rosa_laevigata RLG00000020146 RLG00000020149 RLG00000020151 RLG00000020154
rosa_multiflora Rmu_co7986250.1_g000001 Rmu_co8305779.1_g000001 Rmu_sc0002718.1_g000011 Rmu_sc0002835.1_g000009 Rmu_sc0002835.1_g000016 Rmu_sc0003046.1_g000007 Rmu_sc0003046.1_g000010 Rmu_sc0004445.1_g000006 Rmu_sc0004810.1_g000002 Rmu_sc0006477.1_g000008 Rmu_sc0014329.1_g000001 Rmu_sc0020976.1_g000003 Rmu_sc0021168.1_g000001 Rmu_sc0022199.1_g000001 Rmu_sc0036991.1_g000001 Rmu_sc0041497.1_g000003
rosa_roxburghii Rroxscaffold_152G00434560 Rroxscaffold_152G00434570 Rroxscaffold_152G00434600 Rroxscaffold_152G00434610 Rroxscaffold_2G00100630 Rroxscaffold_2G00100640 Rroxscaffold_2G00100660 Rroxscaffold_2G00100670 Rroxscaffold_2G00100680 Rroxscaffold_2G00100690
rosa_rugosa Rorug02G0392300 Rorug02G0392400 Rorug02G0392400
rosa_samantha Rh2AG445700 Rh2AG445800 Rh2AG446000 Rh2AG446100 Rh2AG446300 Rh2AG446600 Rh2BG457400 Rh2BG457500 Rh2BG457600 Rh2BG457900 Rh2BG458300 Rh2CG432300 Rh2CG432400 Rh2CG432500 Rh2CG432700 Rh2CG432900 Rh2CG433000 Rh2CG433300 Rh2DG467100 Rh2DG467200 Rh2DG467300 Rh2DG467600 Rh2DG467900 Rh3DG194100
rosa_wichuraiana Rw2G036420 Rw2G036450 Rw2G036470 Rw3G014900 Rw3G014920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 998
Acc36I ACCTGC 1 cut(s) 763
AccB1I GGYRCC 1 cut(s) 230
AccII CGCG 1 cut(s) 2851
AciI CCGC 5 cut(s) 549, 582, 1499, 2032, 2701
AclWI GGATC 9 cut(s) 245, 919, 932, 992, 1235, 1787, 2274, 2481, 2609
AcoI YGGCCR 1 cut(s) 1672
AcsI RAATTY 5 cut(s) 287, 899, 1362, 2023, 2870
AcuI CTGAAG 5 cut(s) 516, 537, 2189, 2624, 2753
AfaI GTAC 2 cut(s) 572, 1235
AfiI CCNNNNNNNGG 6 cut(s) 362, 779, 780, 865, 934, 2630
AflII CTTAAG 1 cut(s) 2050
AflIII ACRYGT 3 cut(s) 1724, 1987, 2849
AhdI GACNNNNNGTC 1 cut(s) 220
AjnI CCWGG 4 cut(s) 77, 527, 927, 2754
AjuI GAANNNNNNNTTGG 6 cut(s) 345, 377, 446, 478, 1519, 1551
AleI CACNNNNGTG 1 cut(s) 80
AloI GAACNNNNNNTCC 2 cut(s) 1977, 2009
Alw21I GWGCWC 2 cut(s) 425, 1753
Alw26I GTCTC 5 cut(s) 727, 733, 932, 1603, 1880
AlwI GGATC 9 cut(s) 245, 919, 932, 992, 1235, 1787, 2274, 2481, 2609
Ama87I CYCGRG 2 cut(s) 730, 1244
AoxI GGCC 4 cut(s) 43, 244, 1672, 1765
ApeKI GCWGC 5 cut(s) 1287, 1782, 2750, 2885, 2888
ApoI RAATTY 5 cut(s) 287, 899, 1362, 2023, 2870
ArsI GACNNNNNNTTYG 4 cut(s) 2101, 2133, 2679, 2711
Asp700I GAANNNNTTC 3 cut(s) 36, 523, 1019
AspLEI GCGC 1 cut(s) 999
AspS9I GGNCC 3 cut(s) 931, 1402, 1826
AsuC2I CCSGG 3 cut(s) 235, 935, 2515
AsuHPI GGTGA 2 cut(s) 94, 1160
AsuII TTCGAA 1 cut(s) 956
AvaI CYCGRG 2 cut(s) 730, 1244
AvaII GGWCC 3 cut(s) 931, 1402, 1826
BaeI ACNNNNGTAYC 2 cut(s) 2165, 2198
BamHI GGATCC 1 cut(s) 924
BanI GGYRCC 1 cut(s) 230
BanII GRGCYC 1 cut(s) 1753
BarI GAAGNNNNNNTAC 2 cut(s) 2114, 2146
BauI CACGAG 1 cut(s) 1548
BbsI GAAGAC 4 cut(s) 717, 1446, 2616, 2692
Bbv12I GWGCWC 2 cut(s) 425, 1753
BbvI GCAGC 4 cut(s) 1299, 1794, 2737, 2872
BccI CCATC 6 cut(s) 79, 159, 1703, 1943, 2024, 2312
BceAI ACGGC 2 cut(s) 58, 1659
BcgI CGANNNNNNTGC 2 cut(s) 2080, 2114
BciT130I CCWGG 4 cut(s) 79, 529, 929, 2756
BciVI GTATCC 1 cut(s) 880
BclI TGATCA 3 cut(s) 1116, 1813, 2334
BcnI CCSGG 3 cut(s) 235, 935, 2515
BcoDI GTCTC 5 cut(s) 727, 733, 932, 1603, 1880
BfaI CTAG 6 cut(s) 759, 809, 1226, 1737, 2151, 2630
BfmI CTRYAG 3 cut(s) 1890, 2270, 2886
BfrI CTTAAG 1 cut(s) 2050
BfuAI ACCTGC 1 cut(s) 763
BfuI GTATCC 1 cut(s) 880
BisI GCNGC 7 cut(s) 1288, 1783, 2033, 2701, 2751, 2886, 2889
BlpI GCTNAGC 1 cut(s) 2792
BlsI GCNGC 7 cut(s) 1289, 1784, 2034, 2702, 2752, 2887, 2890
Bme1390I CCNGG 7 cut(s) 79, 235, 529, 929, 935, 2515, 2756
Bme18I GGWCC 3 cut(s) 931, 1402, 1826
BmeRI GACNNNNNGTC 1 cut(s) 220
BmeT110I CYCGRG 2 cut(s) 730, 1244
BmgT120I GGNCC 3 cut(s) 931, 1402, 1826
BmiI GGNNCC 2 cut(s) 232, 926
BmrFI CCNGG 7 cut(s) 79, 235, 529, 929, 935, 2515, 2756
BmrI ACTGGG 1 cut(s) 1600
BmsI GCATC 4 cut(s) 352, 364, 627, 638
BmuI ACTGGG 1 cut(s) 1600
BpiI GAAGAC 4 cut(s) 717, 1446, 2616, 2692
BplI GAGNNNNNCTC 4 cut(s) 674, 706, 1196, 1228
BpmI CTGGAG 1 cut(s) 2090
Bpu10I CCTNAGC 1 cut(s) 324
Bpu1102I GCTNAGC 1 cut(s) 2792
Bpu14I TTCGAA 1 cut(s) 956
BpuEI CTTGAG 7 cut(s) 423, 662, 1173, 1377, 2087, 2402, 2522
BpuMI CCSGG 3 cut(s) 235, 935, 2515
BsaI GGTCTC 2 cut(s) 733, 932
BsaJI CCNNGG 6 cut(s) 78, 1050, 1412, 1768, 2754, 2892
BsaWI WCCGGW 1 cut(s) 1832
BsaXI ACNNNNNCTCC 2 cut(s) 2475, 2505
Bsc4I CCNNNNNNNGG 6 cut(s) 362, 779, 780, 865, 934, 2630
Bse118I RCCGGY 1 cut(s) 2623
Bse1I ACTGG 5 cut(s) 191, 729, 854, 986, 1595
Bse3DI GCAATG 2 cut(s) 1941, 2787
BseBI CCWGG 4 cut(s) 79, 529, 929, 2756
BseDI CCNNGG 6 cut(s) 78, 1050, 1412, 1768, 2754, 2892
BseGI GGATG 7 cut(s) 124, 170, 343, 379, 387, 789, 2323
BseLI CCNNNNNNNGG 6 cut(s) 362, 779, 780, 865, 934, 2630
BseMI GCAATG 2 cut(s) 1941, 2787
BseMII CTCAG 4 cut(s) 506, 705, 1166, 1229
BseNI ACTGG 5 cut(s) 191, 729, 854, 986, 1595
BseRI GAGGAG 3 cut(s) 239, 473, 695
BseX3I CGGCCG 1 cut(s) 1672
BseXI GCAGC 4 cut(s) 1299, 1794, 2737, 2872
BseYI CCCAGC 1 cut(s) 1200
BsgI GTGCAG 1 cut(s) 1250
Bsh1236I CGCG 1 cut(s) 2851
Bsh1285I CGRYCG 1 cut(s) 1675
BshFI GGCC 4 cut(s) 45, 246, 1674, 1767
BshNI GGYRCC 1 cut(s) 230
BsiEI CGRYCG 1 cut(s) 1675
BsiHKAI GWGCWC 2 cut(s) 425, 1753
BsiHKCI CYCGRG 2 cut(s) 730, 1244
BsiSI CCGG 6 cut(s) 235, 934, 1502, 1833, 2515, 2624
BslFI GGGAC 2 cut(s) 1974, 2497
BslI CCNNNNNNNGG 6 cut(s) 362, 779, 780, 865, 934, 2630
BsmAI GTCTC 5 cut(s) 727, 733, 932, 1603, 1880
BsmFI GGGAC 2 cut(s) 1974, 2497
BsmI GAATGC 4 cut(s) 631, 964, 1161, 2360
BsnI GGCC 4 cut(s) 45, 246, 1674, 1767
Bso31I GGTCTC 2 cut(s) 733, 932
BsoBI CYCGRG 2 cut(s) 730, 1244
Bsp119I TTCGAA 1 cut(s) 956
Bsp1286I GDGCHC 2 cut(s) 425, 1753
Bsp1720I GCTNAGC 1 cut(s) 2792
Bsp19I CCATGG 1 cut(s) 1050
BspACI CCGC 5 cut(s) 549, 582, 1499, 2032, 2701
BspANI GGCC 4 cut(s) 45, 246, 1674, 1767
BspCNI CTCAG 4 cut(s) 507, 704, 1167, 1228
BspFNI CGCG 1 cut(s) 2851
BspLI GGNNCC 2 cut(s) 232, 926
BspMAI CTGCAG 2 cut(s) 2274, 2890
BspMI ACCTGC 1 cut(s) 763
BspPI GGATC 9 cut(s) 245, 919, 932, 992, 1235, 1787, 2274, 2481, 2609
BspQI GCTCTTC 1 cut(s) 1499
BspT104I TTCGAA 1 cut(s) 956
BspT107I GGYRCC 1 cut(s) 230
BspTI CTTAAG 1 cut(s) 2050
BspTNI GGTCTC 2 cut(s) 733, 932
BsrDI GCAATG 2 cut(s) 1941, 2787
BsrFI RCCGGY 1 cut(s) 2623
BsrI ACTGG 5 cut(s) 191, 729, 854, 986, 1595
BssAI RCCGGY 1 cut(s) 2623
BssECI CCNNGG 6 cut(s) 78, 1050, 1412, 1768, 2754, 2892
BssSI CACGAG 1 cut(s) 1548
BssT1I CCWWGG 3 cut(s) 1050, 1412, 1768
Bst2BI CACGAG 1 cut(s) 1548
Bst2UI CCWGG 4 cut(s) 79, 529, 929, 2756
Bst4CI ACNGT 8 cut(s) 1475, 1891, 2004, 2204, 2487, 2511, 2836, 2863
Bst6I CTCTTC 4 cut(s) 492, 1188, 1499, 2453
BstAFI CTTAAG 1 cut(s) 2050
BstAPI GCANNNNNTGC 1 cut(s) 2697
BstBI TTCGAA 1 cut(s) 956
BstC8I GCNNGC 2 cut(s) 2636, 2748
BstDEI CTNAG 9 cut(s) 324, 515, 588, 691, 1175, 1215, 2342, 2425, 2792
BstDSI CCRYGG 1 cut(s) 1050
BstF5I GGATG 7 cut(s) 124, 170, 343, 379, 387, 789, 2323
BstFNI CGCG 1 cut(s) 2851
BstHHI GCGC 1 cut(s) 999
BstMAI GTCTC 5 cut(s) 727, 733, 932, 1603, 1880
BstMCI CGRYCG 1 cut(s) 1675
BstMWI GCNNNNNNNGC 9 cut(s) 10, 557, 1145, 1296, 1498, 1779, 2635, 2697, 2743
BstNI CCWGG 4 cut(s) 79, 529, 929, 2756
BstNSI RCATGY 2 cut(s) 821, 1728
BstSCI CCNGG 7 cut(s) 77, 233, 527, 927, 933, 2513, 2754
BstSFI CTRYAG 3 cut(s) 1890, 2270, 2886
BstUI CGCG 1 cut(s) 2851
BstV1I GCAGC 4 cut(s) 1299, 1794, 2737, 2872
BstV2I GAAGAC 4 cut(s) 717, 1446, 2616, 2692
BstX2I RGATCY 4 cut(s) 237, 924, 2266, 2473
BstYI RGATCY 4 cut(s) 237, 924, 2266, 2473
BstZI CGGCCG 1 cut(s) 1672
BsuI GTATCC 1 cut(s) 880
BsuRI GGCC 4 cut(s) 45, 246, 1674, 1767
BtgI CCRYGG 1 cut(s) 1050
BtsCI GGATG 7 cut(s) 124, 170, 343, 379, 387, 789, 2323
BtsI GCAGTG 1 cut(s) 1079
BtsIMutI CAGTG 4 cut(s) 1079, 1418, 1471, 2000
BveI ACCTGC 1 cut(s) 763
Cac8I GCNNGC 2 cut(s) 2636, 2748
CfoI GCGC 1 cut(s) 999
Cfr10I RCCGGY 1 cut(s) 2623
Cfr13I GGNCC 3 cut(s) 931, 1402, 1826
CseI GACGC 3 cut(s) 680, 2697, 2857
Csp6I GTAC 2 cut(s) 571, 1234
CviQI GTAC 2 cut(s) 571, 1234
DdeI CTNAG 9 cut(s) 324, 515, 588, 691, 1175, 1215, 2342, 2425, 2792
DraI TTTAAA 2 cut(s) 1143, 2028
DriI GACNNNNNGTC 1 cut(s) 220
EaeI YGGCCR 1 cut(s) 1672
EagI CGGCCG 1 cut(s) 1672
Eam1104I CTCTTC 4 cut(s) 492, 1188, 1499, 2453
Eam1105I GACNNNNNGTC 1 cut(s) 220
EarI CTCTTC 4 cut(s) 492, 1188, 1499, 2453
Ecl136II GAGCTC 1 cut(s) 1751
EclXI CGGCCG 1 cut(s) 1672
Eco130I CCWWGG 3 cut(s) 1050, 1412, 1768
Eco24I GRGCYC 1 cut(s) 1753
Eco31I GGTCTC 2 cut(s) 733, 932
Eco47I GGWCC 3 cut(s) 931, 1402, 1826
Eco52I CGGCCG 1 cut(s) 1672
Eco53kI GAGCTC 1 cut(s) 1751
Eco57I CTGAAG 5 cut(s) 516, 537, 2189, 2624, 2753
Eco88I CYCGRG 2 cut(s) 730, 1244
EcoICRI GAGCTC 1 cut(s) 1751
EcoRII CCWGG 4 cut(s) 77, 527, 927, 2754
EcoT14I CCWWGG 3 cut(s) 1050, 1412, 1768
EcoT22I ATGCAT 2 cut(s) 6, 964
EcoT38I GRGCYC 1 cut(s) 1753
ErhI CCWWGG 3 cut(s) 1050, 1412, 1768
FalI AAGNNNNNCTT 2 cut(s) 2044, 2076
FaqI GGGAC 2 cut(s) 1974, 2497
FauI CCCGC 1 cut(s) 1506
FbaI TGATCA 3 cut(s) 1116, 1813, 2334
Fnu4HI GCNGC 7 cut(s) 1288, 1783, 2033, 2701, 2751, 2886, 2889
FokI GGATG 7 cut(s) 131, 177, 330, 374, 386, 796, 2330
FriOI GRGCYC 1 cut(s) 1753
Fsp4HI GCNGC 7 cut(s) 1288, 1783, 2033, 2701, 2751, 2886, 2889
FspBI CTAG 6 cut(s) 759, 809, 1226, 1737, 2151, 2630
FspI TGCGCA 1 cut(s) 998
GlaI GCGC 1 cut(s) 998
GluI GCNGC 7 cut(s) 1288, 1783, 2033, 2701, 2751, 2886, 2889
GsaI CCCAGC 1 cut(s) 1204
GsuI CTGGAG 1 cut(s) 2090
HaeIII GGCC 4 cut(s) 45, 246, 1674, 1767
HapII CCGG 6 cut(s) 235, 934, 1502, 1833, 2515, 2624
HgaI GACGC 3 cut(s) 680, 2697, 2857
HhaI GCGC 1 cut(s) 999
Hin6I GCGC 1 cut(s) 997
HinP1I GCGC 1 cut(s) 997
HincII GTYRAC 1 cut(s) 382
HindII GTYRAC 1 cut(s) 382
HindIII AAGCTT 4 cut(s) 2534, 2720, 2735, 2744
HpaII CCGG 6 cut(s) 235, 934, 1502, 1833, 2515, 2624
HphI GGTGA 2 cut(s) 94, 1160
Hpy166II GTNNAC 6 cut(s) 40, 382, 752, 823, 1331, 2058
Hpy8I GTNNAC 6 cut(s) 40, 382, 752, 823, 1331, 2058
Hpy99I CGWCG 1 cut(s) 864
HpyAV CCTTC 4 cut(s) 109, 781, 1553, 2257
HpyCH4III ACNGT 8 cut(s) 1475, 1891, 2004, 2204, 2487, 2511, 2836, 2863
HpyCH4IV ACGT 2 cut(s) 1381, 1987
HpyF10VI GCNNNNNNNGC 9 cut(s) 10, 557, 1145, 1296, 1498, 1779, 2635, 2697, 2743
HpyF3I CTNAG 9 cut(s) 324, 515, 588, 691, 1175, 1215, 2342, 2425, 2792
HpySE526I ACGT 2 cut(s) 1381, 1987
HspAI GCGC 1 cut(s) 997
Ksp22I TGATCA 3 cut(s) 1116, 1813, 2334
LguI GCTCTTC 1 cut(s) 1499
LmnI GCTCC 3 cut(s) 1101, 1204, 1748
Lsp1109I GCAGC 4 cut(s) 1299, 1794, 2737, 2872
LweI GCATC 4 cut(s) 352, 364, 627, 638
MaeI CTAG 6 cut(s) 759, 809, 1226, 1737, 2151, 2630
MaeII ACGT 2 cut(s) 1381, 1987
MaeIII GTNAC 7 cut(s) 392, 1416, 1594, 1676, 1922, 2517, 2830
MfeI CAATTG 5 cut(s) 1134, 2085, 2207, 2216, 2448
MflI RGATCY 4 cut(s) 237, 924, 2266, 2473
MhlI GDGCHC 2 cut(s) 425, 1753
MluI ACGCGT 1 cut(s) 2849
MlyI GAGTC 6 cut(s) 305, 692, 729, 2078, 2215, 2438
MmeI TCCRAC 6 cut(s) 351, 371, 444, 2020, 2384, 2821
Mph1103I ATGCAT 2 cut(s) 6, 964
MroXI GAANNNNTTC 3 cut(s) 36, 523, 1019
MslI CAYNNNNRTG 3 cut(s) 80, 1016, 2258
MspA1I CMGCKG 1 cut(s) 2885
MspCI CTTAAG 1 cut(s) 2050
MspI CCGG 6 cut(s) 235, 934, 1502, 1833, 2515, 2624
MspR9I CCNGG 7 cut(s) 79, 235, 529, 929, 935, 2515, 2756
MunI CAATTG 5 cut(s) 1134, 2085, 2207, 2216, 2448
Mva1269I GAATGC 4 cut(s) 631, 964, 1161, 2360
MvaI CCWGG 4 cut(s) 79, 529, 929, 2756
MvnI CGCG 1 cut(s) 2851
MwoI GCNNNNNNNGC 9 cut(s) 10, 557, 1145, 1296, 1498, 1779, 2635, 2697, 2743
NciI CCSGG 3 cut(s) 235, 935, 2515
NcoI CCATGG 1 cut(s) 1050
NlaIV GGNNCC 2 cut(s) 232, 926
NmuCI GTSAC 3 cut(s) 1416, 1922, 2830
NsbI TGCGCA 1 cut(s) 998
NsiI ATGCAT 2 cut(s) 6, 964
NspI RCATGY 2 cut(s) 821, 1728
NspV TTCGAA 1 cut(s) 956
OliI CACNNNNGTG 1 cut(s) 80
PaeR7I CTCGAG 1 cut(s) 730
PciI ACATGT 1 cut(s) 1724
PciSI GCTCTTC 1 cut(s) 1499
PctI GAATGC 4 cut(s) 631, 964, 1161, 2360
PdmI GAANNNNTTC 3 cut(s) 36, 523, 1019
PflFI GACNNNGTC 1 cut(s) 1040
PfoI TCCNGGA 2 cut(s) 527, 933
PkrI GCNGC 7 cut(s) 1289, 1784, 2034, 2702, 2752, 2887, 2890
PleI GAGTC 6 cut(s) 304, 691, 729, 2077, 2215, 2437
PpsI GAGTC 6 cut(s) 304, 691, 729, 2077, 2215, 2437
PscI ACATGT 1 cut(s) 1724
Psp124BI GAGCTC 1 cut(s) 1753
Psp6I CCWGG 4 cut(s) 77, 527, 927, 2754
PspFI CCCAGC 1 cut(s) 1200
PspGI CCWGG 4 cut(s) 77, 527, 927, 2754
PspN4I GGNNCC 2 cut(s) 232, 926
PspPI GGNCC 3 cut(s) 931, 1402, 1826
PstI CTGCAG 2 cut(s) 2274, 2890
PsuI RGATCY 4 cut(s) 237, 924, 2266, 2473
PsyI GACNNNGTC 1 cut(s) 1040
PvuII CAGCTG 1 cut(s) 2885
RsaI GTAC 2 cut(s) 572, 1235
RsaNI GTAC 2 cut(s) 571, 1234
RseI CAYNNNNRTG 3 cut(s) 80, 1016, 2258
SacI GAGCTC 1 cut(s) 1753
SapI GCTCTTC 1 cut(s) 1499
SatI GCNGC 7 cut(s) 1288, 1783, 2033, 2701, 2751, 2886, 2889
Sau96I GGNCC 3 cut(s) 931, 1402, 1826
SchI GAGTC 6 cut(s) 305, 692, 729, 2078, 2215, 2438
ScrFI CCNGG 7 cut(s) 79, 235, 529, 929, 935, 2515, 2756
SduI GDGCHC 2 cut(s) 425, 1753
SfaNI GCATC 4 cut(s) 352, 364, 627, 638
SfcI CTRYAG 3 cut(s) 1890, 2270, 2886
Sfr274I CTCGAG 1 cut(s) 730
SfuI TTCGAA 1 cut(s) 956
SinI GGWCC 3 cut(s) 931, 1402, 1826
SlaI CTCGAG 1 cut(s) 730
SmiMI CAYNNNNRTG 3 cut(s) 80, 1016, 2258
SmlI CTYRAG 9 cut(s) 438, 641, 730, 1188, 1392, 2050, 2066, 2417, 2501
SmoI CTYRAG 9 cut(s) 438, 641, 730, 1188, 1392, 2050, 2066, 2417, 2501
SsiI CCGC 5 cut(s) 549, 582, 1499, 2032, 2701
SspI AATATT 2 cut(s) 2763, 2813
SspMI CTAG 6 cut(s) 759, 809, 1226, 1737, 2151, 2630
SstI GAGCTC 1 cut(s) 1753
StyD4I CCNGG 7 cut(s) 77, 233, 527, 927, 933, 2513, 2754
StyI CCWWGG 3 cut(s) 1050, 1412, 1768
TaaI ACNGT 8 cut(s) 1475, 1891, 2004, 2204, 2487, 2511, 2836, 2863
TaiI ACGT 2 cut(s) 1384, 1990
TaqII GACCGA 1 cut(s) 1167
TatI WGTACW 1 cut(s) 1233
TauI GCSGC 2 cut(s) 2035, 2703
TscAI CASTG 4 cut(s) 1086, 1425, 1478, 2007
TseFI GTSAC 3 cut(s) 1416, 1922, 2830
TseI GCWGC 5 cut(s) 1287, 1782, 2750, 2885, 2888
Tsp45I GTSAC 3 cut(s) 1416, 1922, 2830
TspGWI ACGGA 2 cut(s) 380, 848
TspRI CASTG 4 cut(s) 1086, 1425, 1478, 2007
Tth111I GACNNNGTC 1 cut(s) 1040
Vha464I CTTAAG 1 cut(s) 2050
VpaK11BI GGWCC 3 cut(s) 931, 1402, 1826
XapI RAATTY 5 cut(s) 287, 899, 1362, 2023, 2870
XceI RCATGY 2 cut(s) 821, 1728
XcmI CCANNNNNNNNNTGG 1 cut(s) 861
XhoI CTCGAG 1 cut(s) 730
XmnI GAANNNNTTC 3 cut(s) 36, 523, 1019
XspI CTAG 6 cut(s) 759, 809, 1226, 1737, 2151, 2630
Zsp2I ATGCAT 2 cut(s) 6, 964
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.