Rmu_sc0002718.1_g000011

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002718.1
Physical Location & Seq
Reverse (-)
27616 .. 31566
3951 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002718.1_g000011.1.cds

Sequence Viewer

Length: 3951 bp
atggataagaaagatgcaaagaaacctgctgctcagcctctcttggctaattataaacaattaatgggcacatttgtgcgcatgatccgatttgcagagaagaggaacagagcaaccggtccctcggcattcattaattccattgagagaaatgctcgcttttttgccatatttgctgtattccttgtgggaagctacggaagtcatgtatcattctatcaagttctcttcttctgtgtcacagtttcccttgtttacttgtacatcacctatgcgccgtttctgtcgttagaggaagacatcaagtggattagaagggaatcgaggatactgcttgctatttcagaggatgcagcaaagcttagggatttaacggatcagattgataccagagcacatgagatctttgattctgaactttattctagtggaataattactatagcggcgctgtataaaatagaggcagcatgggtaaccaacaccatgttcgtggctctgaaggcacaaaagttagttgcaagatttgagaaacagagaggagacgggagccagagccagagcaaaggttctgctagaatccttgagaatctcaagaggataggtgttgctacaatccttgagaatatgaagcagatagaaaggcttatacttcacacaaggcgggtcaaggaggaaatagatgacagcattgtgatgaagaaggtgcgtcggattaacatatgtgaatcgctggagagatcaaggtctaatatcagaagcctgcgggacagacccattattgaacaagatcaagagaaatgggaaggctttaaagcgcgagttgcctcagcagctgatgtggctctctctcttgcacagaagataaaaggtctgatcagtcaaaacccagatctgatgcgtgagagtactggagagcaaataagtatgatccgattgcaattgctgcttttgcatccttttctgaaagatattctagtacttcgattagagagtaaagttgaagaggcctgggtggaggaaatggaagagattataaatgaagcaaacgctgcaatcaacaacttttcactgagaccagcgcatggaattgtgatcaatagttggtactggaagacaggcagaaagctcaagagagatataagtggcatcaacgttggattcgcacaacttctagaaaggaaggagaggtatggcttcaaattcataagaagggattcatcaaagtttgtctaccatcaatcccaccatcacaacaataccagcgatgacagaatcattgcatttgtaatagccaggatgcgtagatacctaattgagcactcggatgtaatgggtgaagcaacttctgaagttgcattgctttgcaatcagatcgaaaacatgcataaacttgttggaggcgatgcaggaatgattgaatttagcagatataattcaagaatggcttggttggagcagatgagaaaaatagctctaagggcagagagatctgtggcaaccttcatacaatataactcggccattgtcagcaagaaacatcctctgaataaaggagcaggaaaatattttgcccctgaagttgaccggatcaagcgtaccatcaatctcttaatgagaagcactaaagtatacggcattgaatcaagggcagagtcgagctcagtggtgggtttggaagaagatgtagatgcagtggtgtcagaattgattagcagcagggaaccacactctattcattcaattttggggattgagggcataggtaagacaacactggcaaaggaaattttttaccatgaaactgttgtgaggcattttttacgccgttcatggtttccttatccttaccacgaattttcaaaggtaatatgtacaaatgatcgcgcagaaggggacggttggcttatagttgtagacaatatctcaaccgaggaacggttggatgtttttgtgaatgatattggtcctcataccagaattctgttcactacacgagacaacaatctggcttcaaaagccgacagtcctccccacaaacttcgactgcggagcaaagaagagagctggaagttgttttcccagatggtgcactttcctccgaatgaggaaaggctagcaaagcagattttaggtacatgtgggggattcccactagccatactgcgtcttggatatctaatgtcaggtaaacatgtgagaactacagcggagttggaactgatgcgtcaatacatgttggagaatgatacgctggtgttaggaaccgacaatacattaactgatagcttgaaagccttgaatgttgatgatcccttgttgaagtgtgtttcttacatgaaactcttcccaagagagcttgaaattccagcaaggagattgattgctttatggattgcagaaggatttgttaaagtcactcccaaaccatcagagacctatgaagatgttgcagacctatcagtcactcccgaaacatcagagacttacgaagatgttgcagacgggtatctatcagtcactcccgaaacatcagagacttacgaagatgttgcagatgggtatctatcagtcactcccgaaacatcagagacttatgaagatgttgcagacgggtatctatcagagttgattgctcgaggtatgattcaagtagttgagagaaagtttaatgggaaagtcaatacatgccgtttgccctatgctatcgaacagttcgagttggaagatatgaattcaaggagacttactcttcggaagaattggagcccatgcagctgtgatgaaaatacggtttccatcttctcctttgatacccgagaaggagataaacccggagaagagataggtagattgctgggcaagacaggtggttccttctaccgtgagctgctagttctcgatcttgaaggtgtatttaaaccagcattgcccaagaagtttggaaagtacttaagcaagttgaggtatctaggcctgaggtggacttacctagattcaatcccagaatctgttgaagaattgctgaacctacaagttttagatgtgaagcacacaaacatccgcaatctcccaagctcaatcatgaaactgcaggaacttcgacacttatacttaaaccagagttatagaaccaagtctatgcctcaacaaggacagagaagctccttgatgaatatccggacattatggggtgtattcgtagataaggatatttctttgaatctccagacattatggggtgcatttgtggataaggattttcctttgaaggatgggctgcagaaggtcaccaccctcagaaaattgggcttgtctttccagttaaatgaagcaaaggaaattgcattagcagactggattgcaaagttgaagcaacttcaatctttaaaattgagatcagtagataaaaagggcaaaccttcttatctacctgacatgcatttgtcacgccttggaaatctccgcagcatacatttgtttgggaagatgagaaattcctcacaatgtcggggcatgcctagaaacctcacacagcttaccttgtcattctctggtatttcaaatgatccaatgcccatgttagaggattacccccaccttaagtttctctgtcttaactttaactctttcgaaggtaaaaagatgacctgctccgggtcaggctttaaaaagcttatagttctgaagctgtggaagctagaccaactagaagattggaatgtggagaaagaggcaatgcaaaatctcagagagttggaggttcgatcgtgtaaaagattgaatgtcccaagtgggtggaggtacttaaagactcttactgaattgaagctaaccaacatgccaaaagaatttgcaacaaccattgagaaaaccaaggggcaactttgggatgactttaaccacaccccagcaattattgcaattaactggcaggagtgtgctgaataa

Protein Analysis

1316

Amino Acids

150.98

Weight (kDa)

8.87

Isoelectric Point (pI)

47.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000657)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g34770
malus_domestica MD17G1025700.v1.1
prunus_persica Prupe.3G040600_v2.0.a1 Prupe.3G040800_v2.0.a1 Prupe.3G041000_v2.0.a1 Prupe.3G041100_v2.0.a1 Prupe.3G041500_v2.0.a1 Prupe.4G109400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037700_v2.0.a1
pyrus_communis pycom09g10040 pycom17g16000
rosa_chinensis RchiOBHm_Chr2g0145591 RchiOBHm_Chr2g0145611
rosa_laevigata RLG00000020146 RLG00000020149 RLG00000020151 RLG00000020154
rosa_multiflora Rmu_co7986250.1_g000001 Rmu_co8305779.1_g000001 Rmu_sc0002718.1_g000011 Rmu_sc0002835.1_g000009 Rmu_sc0002835.1_g000016 Rmu_sc0003046.1_g000007 Rmu_sc0003046.1_g000010 Rmu_sc0004445.1_g000006 Rmu_sc0004810.1_g000002 Rmu_sc0006477.1_g000008 Rmu_sc0014329.1_g000001 Rmu_sc0020976.1_g000003 Rmu_sc0021168.1_g000001 Rmu_sc0022199.1_g000001 Rmu_sc0036991.1_g000001 Rmu_sc0041497.1_g000003
rosa_roxburghii Rroxscaffold_152G00434560 Rroxscaffold_152G00434570 Rroxscaffold_152G00434600 Rroxscaffold_152G00434610 Rroxscaffold_2G00100630 Rroxscaffold_2G00100640 Rroxscaffold_2G00100660 Rroxscaffold_2G00100670 Rroxscaffold_2G00100680 Rroxscaffold_2G00100690
rosa_rugosa Rorug02G0392300 Rorug02G0392400 Rorug02G0392400
rosa_samantha Rh2AG445700 Rh2AG445800 Rh2AG446000 Rh2AG446100 Rh2AG446300 Rh2AG446600 Rh2BG457400 Rh2BG457500 Rh2BG457600 Rh2BG457900 Rh2BG458300 Rh2CG432300 Rh2CG432400 Rh2CG432500 Rh2CG432700 Rh2CG432900 Rh2CG433000 Rh2CG433300 Rh2DG467100 Rh2DG467200 Rh2DG467300 Rh2DG467600 Rh2DG467900 Rh3DG194100
rosa_wichuraiana Rw2G036420 Rw2G036450 Rw2G036470 Rw3G014900 Rw3G014920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 54, 1037
AasI GACNNNNNNGTC 1 cut(s) 2462
Acc16I TGCGCA 1 cut(s) 80
Acc36I ACCTGC 2 cut(s) 34, 3659
AccB7I CCANNNNNTGG 1 cut(s) 1085
AccI GTMKAC 3 cut(s) 1233, 1632, 1917
AccII CGCG 2 cut(s) 820, 1887
AccIII TCCGGA 1 cut(s) 3180
AciI CCGC 7 cut(s) 446, 664, 766, 2050, 2210, 3064, 3466
AclI AACGTT 1 cut(s) 1155
AclWI GGATC 6 cut(s) 79, 384, 925, 1598, 2306, 3563
AcoI YGGCCR 1 cut(s) 1521
AcsI RAATTY 9 cut(s) 1202, 1421, 1788, 1856, 1980, 2364, 2734, 3496, 3851
AcuI CTGAAG 4 cut(s) 521, 1371, 1599, 3707
AfaI GTAC 9 cut(s) 263, 910, 981, 1109, 1600, 1876, 2137, 2951, 3806
AfiI CCNNNNNNNGG 4 cut(s) 1085, 1938, 3152, 3657
AflII CTTAAG 2 cut(s) 2953, 3602
AflIII ACRYGT 3 cut(s) 2138, 2194, 2235
AgeI ACCGGT 1 cut(s) 116
AjnI CCWGG 2 cut(s) 1010, 1295
AjuI GAANNNNNNNTTGG 2 cut(s) 473, 505
AleI CACNNNNGTG 1 cut(s) 74
Alw21I GWGCWC 4 cut(s) 397, 1323, 1664, 2094
Alw26I GTCTC 8 cut(s) 537, 1069, 1992, 2429, 2477, 2531, 2585, 2737
Alw44I GTGCAC 1 cut(s) 2090
AlwI GGATC 6 cut(s) 79, 384, 925, 1598, 2306, 3563
AlwNI CAGNNNCTG 2 cut(s) 836, 3011
Ama87I CYCGRG 2 cut(s) 2637, 2817
Aor13HI TCCGGA 1 cut(s) 3180
AoxI GGCC 3 cut(s) 1008, 1521, 2974
ApaLI GTGCAC 1 cut(s) 2090
ApoI RAATTY 9 cut(s) 1202, 1421, 1788, 1856, 1980, 2364, 2734, 3496, 3851
ArsI GACNNNNNNTTYG 2 cut(s) 2736, 2768
AseI ATTAAT 2 cut(s) 62, 135
AsiGI ACCGGT 1 cut(s) 116
Asp700I GAANNNNTTC 2 cut(s) 1216, 2345
AspLEI GCGC 6 cut(s) 81, 277, 451, 820, 1084, 1889
AspS9I GGNCC 2 cut(s) 119, 1967
AsuC2I CCSGG 2 cut(s) 2835, 3658
AsuHPI GGTGA 3 cut(s) 259, 1349, 3283
AsuII TTCGAA 1 cut(s) 3633
AsuNHI GCTAGC 1 cut(s) 2116
AvaI CYCGRG 2 cut(s) 2637, 2817
AvaII GGWCC 2 cut(s) 119, 1967
AxyI CCTNAGG 1 cut(s) 2978
BaeGI GKGCMC 2 cut(s) 71, 2094
BaeI ACNNNNGTAYC 2 cut(s) 2241, 2274
BanII GRGCYC 2 cut(s) 1664, 2771
BauI CACGAG 1 cut(s) 1995
BbsI GAAGAC 2 cut(s) 303, 1121
Bbv12I GWGCWC 4 cut(s) 397, 1323, 1664, 2094
BbvCI CCTCAGC 1 cut(s) 829
BccI CCATC 8 cut(s) 1245, 1257, 1610, 2080, 2437, 2552, 2807, 3269
BceAI ACGGC 4 cut(s) 262, 1651, 1812, 2676
BciT130I CCWGG 2 cut(s) 1012, 1297
BciVI GTATCC 1 cut(s) 321
BclI TGATCA 2 cut(s) 876, 1095
BcnI CCSGG 2 cut(s) 2835, 3658
BcoDI GTCTC 8 cut(s) 537, 1069, 1992, 2429, 2477, 2531, 2585, 2737
BfmI CTRYAG 4 cut(s) 441, 2205, 3092, 3281
BfoI RGCGCY 1 cut(s) 452
BfrI CTTAAG 2 cut(s) 2953, 3602
BfuAI ACCTGC 2 cut(s) 34, 3659
BfuI GTATCC 1 cut(s) 321
BglII AGATCT 3 cut(s) 402, 892, 1490
BlpI GCTNAGC 1 cut(s) 33
BmcAI AGTACT 3 cut(s) 910, 981, 2951
Bme1390I CCNGG 4 cut(s) 1012, 1297, 2835, 3658
Bme18I GGWCC 2 cut(s) 119, 1967
BmeT110I CYCGRG 2 cut(s) 2637, 2817
BmgT120I GGNCC 2 cut(s) 119, 1967
BmiI GGNNCC 6 cut(s) 121, 551, 1725, 2266, 2768, 2875
BmrFI CCNGG 4 cut(s) 1012, 1297, 2835, 3658
BmsI GCATC 9 cut(s) 4, 340, 888, 964, 1158, 1290, 1396, 1681, 2214
BmtI GCTAGC 1 cut(s) 2120
BpiI GAAGAC 2 cut(s) 303, 1121
BplI GAGNNNNNCTC 6 cut(s) 139, 171, 1646, 1678, 2734, 2766
BpmI CTGGAG 3 cut(s) 755, 933, 3212
Bpu10I CCTNAGC 2 cut(s) 362, 829
Bpu1102I GCTNAGC 1 cut(s) 33
Bpu14I TTCGAA 1 cut(s) 3633
BpuEI CTTGAG 4 cut(s) 578, 605, 641, 1115
BpuMI CCSGG 2 cut(s) 2835, 3658
BsaBI GATNNNNATC 2 cut(s) 2562, 3176
BsaI GGTCTC 2 cut(s) 1069, 2429
BsaJI CCNNGG 5 cut(s) 123, 1011, 1932, 3454, 3876
BsaWI WCCGGW 3 cut(s) 116, 1587, 3180
Bsc4I CCNNNNNNNGG 4 cut(s) 1085, 1938, 3152, 3657
Bse118I RCCGGY 1 cut(s) 116
Bse1I ACTGG 6 cut(s) 916, 1115, 1782, 3322, 3362, 3935
Bse21I CCTNAGG 1 cut(s) 2978
Bse3DI GCAATG 4 cut(s) 1278, 1358, 2927, 3744
Bse8I GATNNNNATC 2 cut(s) 2562, 3176
BseAI TCCGGA 1 cut(s) 3180
BseBI CCWGG 2 cut(s) 1012, 1297
BseDI CCNNGG 5 cut(s) 123, 1011, 1932, 3454, 3876
BseGI GGATG 9 cut(s) 355, 955, 1305, 1333, 1540, 1951, 3060, 3280, 3898
BseJI GATNNNNATC 2 cut(s) 2562, 3176
BseLI CCNNNNNNNGG 4 cut(s) 1085, 1938, 3152, 3657
BseMI GCAATG 4 cut(s) 1278, 1358, 2927, 3744
BseMII CTCAG 7 cut(s) 47, 843, 1064, 1677, 2969, 3313, 3763
BseNI ACTGG 6 cut(s) 916, 1115, 1782, 3322, 3362, 3935
BseRI GAGGAG 1 cut(s) 555
BseSI GKGCMC 2 cut(s) 71, 2094
BseYI CCCAGC 2 cut(s) 2857, 3910
Bsh1236I CGCG 2 cut(s) 820, 1887
Bsh1285I CGRYCG 1 cut(s) 3770
BshFI GGCC 3 cut(s) 1010, 1523, 2976
BshTI ACCGGT 1 cut(s) 116
BsiEI CGRYCG 1 cut(s) 3770
BsiHKAI GWGCWC 4 cut(s) 397, 1323, 1664, 2094
BsiHKCI CYCGRG 2 cut(s) 2637, 2817
BsiSI CCGG 5 cut(s) 117, 1588, 2835, 3181, 3657
BslFI GGGAC 4 cut(s) 105, 782, 1910, 3773
BslI CCNNNNNNNGG 4 cut(s) 1085, 1938, 3152, 3657
BsmAI GTCTC 8 cut(s) 537, 1069, 1992, 2429, 2477, 2531, 2585, 2737
BsmBI CGTCTC 1 cut(s) 537
BsmFI GGGAC 4 cut(s) 105, 782, 1910, 3773
BsmI GAATGC 1 cut(s) 128
BsnI GGCC 3 cut(s) 1010, 1523, 2976
Bso31I GGTCTC 2 cut(s) 1069, 2429
BsoBI CYCGRG 2 cut(s) 2637, 2817
Bsp119I TTCGAA 1 cut(s) 3633
Bsp1286I GDGCHC 6 cut(s) 71, 397, 1323, 1664, 2094, 2771
Bsp13I TCCGGA 1 cut(s) 3180
Bsp1407I TGTACA 2 cut(s) 261, 1874
Bsp1720I GCTNAGC 1 cut(s) 33
BspACI CCGC 7 cut(s) 446, 664, 766, 2050, 2210, 3064, 3466
BspANI GGCC 3 cut(s) 1010, 1523, 2976
BspCNI CTCAG 7 cut(s) 46, 842, 1065, 1676, 2970, 3312, 3762
BspEI TCCGGA 1 cut(s) 3180
BspFNI CGCG 2 cut(s) 820, 1887
BspHI TCATGA 1 cut(s) 3084
BspLI GGNNCC 6 cut(s) 121, 551, 1725, 2266, 2768, 2875
BspMAI CTGCAG 2 cut(s) 3096, 3285
BspMI ACCTGC 2 cut(s) 34, 3659
BspOI GCTAGC 1 cut(s) 2120
BspPI GGATC 6 cut(s) 79, 384, 925, 1598, 2306, 3563
BspT104I TTCGAA 1 cut(s) 3633
BspTI CTTAAG 2 cut(s) 2953, 3602
BspTNI GGTCTC 2 cut(s) 1069, 2429
BsrDI GCAATG 4 cut(s) 1278, 1358, 2927, 3744
BsrFI RCCGGY 1 cut(s) 116
BsrGI TGTACA 2 cut(s) 261, 1874
BsrI ACTGG 6 cut(s) 916, 1115, 1782, 3322, 3362, 3935
BssAI RCCGGY 1 cut(s) 116
BssECI CCNNGG 5 cut(s) 123, 1011, 1932, 3454, 3876
BssNAI GTATAC 1 cut(s) 1633
BssSI CACGAG 1 cut(s) 1995
BssT1I CCWWGG 2 cut(s) 3454, 3876
Bst1107I GTATAC 1 cut(s) 1633
Bst2BI CACGAG 1 cut(s) 1995
Bst2UI CCWGG 2 cut(s) 1012, 1297
Bst4CI ACNGT 8 cut(s) 244, 1807, 1901, 1941, 2027, 2715, 2794, 2885
Bst6I CTCTTC 8 cut(s) 95, 233, 999, 1023, 2055, 2351, 2757, 2835
BstAFI CTTAAG 2 cut(s) 2953, 3602
BstAPI GCANNNNNTGC 3 cut(s) 946, 1052, 3920
BstAUI TGTACA 2 cut(s) 261, 1874
BstBI TTCGAA 1 cut(s) 3633
BstC8I GCNNGC 5 cut(s) 157, 336, 764, 2118, 3518
BstDEI CTNAG 9 cut(s) 33, 362, 829, 1073, 1478, 1663, 2978, 3299, 3749
BstEII GGTNACC 2 cut(s) 475, 3289
BstENI CCTNNNNNAGG 1 cut(s) 3150
BstF5I GGATG 9 cut(s) 355, 955, 1305, 1333, 1540, 1951, 3060, 3280, 3898
BstFNI CGCG 2 cut(s) 820, 1887
BstH2I RGCGCY 1 cut(s) 452
BstHHI GCGC 6 cut(s) 81, 277, 451, 820, 1084, 1889
BstMAI GTCTC 8 cut(s) 537, 1069, 1992, 2429, 2477, 2531, 2585, 2737
BstMCI CGRYCG 1 cut(s) 3770
BstNI CCWGG 2 cut(s) 1012, 1297
BstNSI RCATGY 8 cut(s) 1387, 2142, 2198, 2239, 2691, 3442, 3520, 3844
BstPI GGTNACC 2 cut(s) 475, 3289
BstSCI CCNGG 4 cut(s) 1010, 1295, 2833, 3656
BstSFI CTRYAG 4 cut(s) 441, 2205, 3092, 3281
BstSLI GKGCMC 2 cut(s) 71, 2094
BstUI CGCG 2 cut(s) 820, 1887
BstV2I GAAGAC 2 cut(s) 303, 1121
BstX2I RGATCY 3 cut(s) 402, 892, 1490
BstXI CCANNNNNNTGG 2 cut(s) 493, 3798
BstYI RGATCY 3 cut(s) 402, 892, 1490
BstZ17I GTATAC 1 cut(s) 1633
Bsu36I CCTNAGG 1 cut(s) 2978
BsuI GTATCC 1 cut(s) 321
BsuRI GGCC 3 cut(s) 1010, 1523, 2976
BtgZI GCGATG 2 cut(s) 1281, 1419
BtsCI GGATG 9 cut(s) 355, 955, 1305, 1333, 1540, 1951, 3060, 3280, 3898
BtsI GCAGTG 1 cut(s) 1701
BtsIMutI CAGTG 4 cut(s) 1070, 1671, 1701, 1775
BveI ACCTGC 2 cut(s) 34, 3659
Cac8I GCNNGC 5 cut(s) 157, 336, 764, 2118, 3518
CaiI CAGNNNCTG 2 cut(s) 836, 3011
CciI TCATGA 1 cut(s) 3084
CfoI GCGC 6 cut(s) 81, 277, 451, 820, 1084, 1889
Cfr10I RCCGGY 1 cut(s) 116
Cfr13I GGNCC 2 cut(s) 119, 1967
CseI GACGC 3 cut(s) 698, 2156, 2216
Csp6I GTAC 9 cut(s) 262, 909, 980, 1108, 1599, 1875, 2136, 2950, 3805
CspAI ACCGGT 1 cut(s) 116
CspCI CAANNNNNGTGG 2 cut(s) 2851, 2886
CviQI GTAC 9 cut(s) 262, 909, 980, 1108, 1599, 1875, 2136, 2950, 3805
DdeI CTNAG 9 cut(s) 33, 362, 829, 1073, 1478, 1663, 2978, 3299, 3749
DraI TTTAAA 4 cut(s) 814, 2920, 3390, 3670
DrdI GACNNNNNNGTC 1 cut(s) 2462
DseDI GACNNNNNNGTC 1 cut(s) 2462
EaeI YGGCCR 1 cut(s) 1521
Eam1104I CTCTTC 8 cut(s) 95, 233, 999, 1023, 2055, 2351, 2757, 2835
EarI CTCTTC 8 cut(s) 95, 233, 999, 1023, 2055, 2351, 2757, 2835
Ecl136II GAGCTC 1 cut(s) 1662
Eco130I CCWWGG 2 cut(s) 3454, 3876
Eco147I AGGCCT 2 cut(s) 1010, 2976
Eco24I GRGCYC 2 cut(s) 1664, 2771
Eco31I GGTCTC 2 cut(s) 1069, 2429
Eco32I GATATC 1 cut(s) 2177
Eco47I GGWCC 2 cut(s) 119, 1967
Eco53kI GAGCTC 1 cut(s) 1662
Eco57I CTGAAG 4 cut(s) 521, 1371, 1599, 3707
Eco81I CCTNAGG 1 cut(s) 2978
Eco88I CYCGRG 2 cut(s) 2637, 2817
Eco91I GGTNACC 2 cut(s) 475, 3289
EcoICRI GAGCTC 1 cut(s) 1662
EcoNI CCTNNNNNAGG 1 cut(s) 3150
EcoO65I GGTNACC 2 cut(s) 475, 3289
EcoRI GAATTC 2 cut(s) 1980, 2734
EcoRII CCWGG 2 cut(s) 1010, 1295
EcoRV GATATC 1 cut(s) 2177
EcoT14I CCWWGG 2 cut(s) 3454, 3876
EcoT22I ATGCAT 2 cut(s) 1389, 3444
EcoT38I GRGCYC 2 cut(s) 1664, 2771
ErhI CCWWGG 2 cut(s) 3454, 3876
Esp3I CGTCTC 1 cut(s) 537
FalI AAGNNNNNCTT 2 cut(s) 1432, 1464
FaqI GGGAC 4 cut(s) 105, 782, 1910, 3773
FauI CCCGC 2 cut(s) 657, 759
FauNDI CATATG 1 cut(s) 722
FbaI TGATCA 2 cut(s) 876, 1095
FblI GTMKAC 3 cut(s) 1233, 1632, 1917
FokI GGATG 9 cut(s) 362, 942, 1312, 1340, 1527, 1958, 3047, 3287, 3905
FriOI GRGCYC 2 cut(s) 1664, 2771
FspAI RTGCGCAY 1 cut(s) 80
FspI TGCGCA 1 cut(s) 80
GlaI GCGC 6 cut(s) 80, 276, 450, 819, 1083, 1888
GsaI CCCAGC 2 cut(s) 2861, 3914
GsuI CTGGAG 3 cut(s) 755, 933, 3212
HaeII RGCGCY 1 cut(s) 452
HaeIII GGCC 3 cut(s) 1010, 1523, 2976
HapII CCGG 5 cut(s) 117, 1588, 2835, 3181, 3657
HgaI GACGC 3 cut(s) 698, 2156, 2216
HhaI GCGC 6 cut(s) 81, 277, 451, 820, 1084, 1889
Hin6I GCGC 6 cut(s) 79, 275, 449, 818, 1082, 1887
HinP1I GCGC 6 cut(s) 79, 275, 449, 818, 1082, 1887
HincII GTYRAC 1 cut(s) 1585
HindII GTYRAC 1 cut(s) 1585
HindIII AAGCTT 2 cut(s) 359, 3674
HpaII CCGG 5 cut(s) 117, 1588, 2835, 3181, 3657
HphI GGTGA 3 cut(s) 259, 1349, 3283
Hpy166II GTNNAC 9 cut(s) 256, 1234, 1585, 1633, 1918, 1989, 2092, 2192, 2985
Hpy8I GTNNAC 9 cut(s) 256, 1234, 1585, 1633, 1918, 1989, 2092, 2192, 2985
Hpy99I CGWCG 1 cut(s) 714
HpyCH4III ACNGT 8 cut(s) 244, 1807, 1901, 1941, 2027, 2715, 2794, 2885
HpyCH4IV ACGT 1 cut(s) 1155
HpyF3I CTNAG 9 cut(s) 33, 362, 829, 1073, 1478, 1663, 2978, 3299, 3749
HpySE526I ACGT 1 cut(s) 1155
HspAI GCGC 6 cut(s) 79, 275, 449, 818, 1082, 1887
Kpn2I TCCGGA 1 cut(s) 3180
Ksp22I TGATCA 2 cut(s) 876, 1095
LmnI GCTCC 7 cut(s) 549, 1456, 1556, 2052, 2766, 3170, 3659
LweI GCATC 9 cut(s) 4, 340, 888, 964, 1158, 1290, 1396, 1681, 2214
MaeII ACGT 1 cut(s) 1155
MaeIII GTNAC 8 cut(s) 238, 475, 2416, 2464, 2518, 2572, 3289, 3447
MfeI CAATTG 1 cut(s) 941
MflI RGATCY 3 cut(s) 402, 892, 1490
MhlI GDGCHC 6 cut(s) 71, 397, 1323, 1664, 2094, 2771
MlyI GAGTC 2 cut(s) 1664, 3808
MmeI TCCRAC 9 cut(s) 692, 1138, 1378, 1434, 1923, 2196, 2220, 2703, 3738
Mph1103I ATGCAT 2 cut(s) 1389, 3444
MroI TCCGGA 1 cut(s) 3180
MroXI GAANNNNTTC 2 cut(s) 1216, 2345
MslI CAYNNNNRTG 4 cut(s) 74, 491, 695, 1326
MspA1I CMGCKG 3 cut(s) 836, 2210, 2778
MspCI CTTAAG 2 cut(s) 2953, 3602
MspI CCGG 5 cut(s) 117, 1588, 2835, 3181, 3657
MspR9I CCNGG 4 cut(s) 1012, 1297, 2835, 3658
MunI CAATTG 1 cut(s) 941
Mva1269I GAATGC 1 cut(s) 128
MvaI CCWGG 2 cut(s) 1012, 1297
MvnI CGCG 2 cut(s) 820, 1887
NciI CCSGG 2 cut(s) 2835, 3658
NdeI CATATG 1 cut(s) 722
NheI GCTAGC 1 cut(s) 2116
NlaIV GGNNCC 6 cut(s) 121, 551, 1725, 2266, 2768, 2875
NmeAIII GCCGAG 2 cut(s) 104, 1499
NmuCI GTSAC 7 cut(s) 238, 2416, 2464, 2518, 2572, 3289, 3447
NsbI TGCGCA 1 cut(s) 80
NsiI ATGCAT 2 cut(s) 1389, 3444
NspI RCATGY 8 cut(s) 1387, 2142, 2198, 2239, 2691, 3442, 3520, 3844
NspV TTCGAA 1 cut(s) 3633
OliI CACNNNNGTG 1 cut(s) 74
PaeI GCATGC 1 cut(s) 3520
PaeR7I CTCGAG 1 cut(s) 2637
PagI TCATGA 1 cut(s) 3084
PceI AGGCCT 2 cut(s) 1010, 2976
PciI ACATGT 3 cut(s) 2138, 2194, 2235
PcsI WCGNNNNNNNCGW 1 cut(s) 2715
PctI GAATGC 1 cut(s) 128
PdmI GAANNNNTTC 2 cut(s) 1216, 2345
PflMI CCANNNNNTGG 1 cut(s) 1085
PinAI ACCGGT 1 cut(s) 116
Ple19I CGATCG 1 cut(s) 3770
PleI GAGTC 2 cut(s) 1663, 3808
PpsI GAGTC 2 cut(s) 1663, 3808
PscI ACATGT 3 cut(s) 2138, 2194, 2235
PshBI ATTAAT 2 cut(s) 62, 135
PsiI TTATAA 2 cut(s) 54, 1037
Psp124BI GAGCTC 1 cut(s) 1664
Psp1406I AACGTT 1 cut(s) 1155
Psp6I CCWGG 2 cut(s) 1010, 1295
PspEI GGTNACC 2 cut(s) 475, 3289
PspFI CCCAGC 2 cut(s) 2857, 3910
PspGI CCWGG 2 cut(s) 1010, 1295
PspN4I GGNNCC 6 cut(s) 121, 551, 1725, 2266, 2768, 2875
PspPI GGNCC 2 cut(s) 119, 1967
PspXI VCTCGAGB 1 cut(s) 2637
PsrI GAACNNNNNNTAC 2 cut(s) 2257, 2289
PstI CTGCAG 2 cut(s) 3096, 3285
PstNI CAGNNNCTG 2 cut(s) 836, 3011
PsuI RGATCY 3 cut(s) 402, 892, 1490
PvuI CGATCG 1 cut(s) 3770
PvuII CAGCTG 2 cut(s) 836, 2778
RsaI GTAC 9 cut(s) 263, 910, 981, 1109, 1600, 1876, 2137, 2951, 3806
RsaNI GTAC 9 cut(s) 262, 909, 980, 1108, 1599, 1875, 2136, 2950, 3805
RseI CAYNNNNRTG 4 cut(s) 74, 491, 695, 1326
SacI GAGCTC 1 cut(s) 1664
Sau96I GGNCC 2 cut(s) 119, 1967
ScaI AGTACT 3 cut(s) 910, 981, 2951
SchI GAGTC 2 cut(s) 1664, 3808
ScrFI CCNGG 4 cut(s) 1012, 1297, 2835, 3658
SduI GDGCHC 6 cut(s) 71, 397, 1323, 1664, 2094, 2771
SfaNI GCATC 9 cut(s) 4, 340, 888, 964, 1158, 1290, 1396, 1681, 2214
SfcI CTRYAG 4 cut(s) 441, 2205, 3092, 3281
Sfr274I CTCGAG 1 cut(s) 2637
SfuI TTCGAA 1 cut(s) 3633
SinI GGWCC 2 cut(s) 119, 1967
SlaI CTCGAG 1 cut(s) 2637
SmiMI CAYNNNNRTG 4 cut(s) 74, 491, 695, 1326
SmlI CTYRAG 7 cut(s) 584, 593, 620, 1130, 2637, 2953, 3602
SmoI CTYRAG 7 cut(s) 584, 593, 620, 1130, 2637, 2953, 3602
SphI GCATGC 1 cut(s) 3520
SseBI AGGCCT 2 cut(s) 1010, 2976
SsiI CCGC 7 cut(s) 446, 664, 766, 2050, 2210, 3064, 3466
SspI AATATT 1 cut(s) 1568
SstI GAGCTC 1 cut(s) 1664
StuI AGGCCT 2 cut(s) 1010, 2976
StyD4I CCNGG 4 cut(s) 1010, 1295, 2833, 3656
StyI CCWWGG 2 cut(s) 3454, 3876
TaaI ACNGT 8 cut(s) 244, 1807, 1901, 1941, 2027, 2715, 2794, 2885
TaiI ACGT 1 cut(s) 1158
TatI WGTACW 5 cut(s) 261, 908, 979, 1874, 2949
TauI GCSGC 1 cut(s) 449
TscAI CASTG 4 cut(s) 1077, 1671, 1701, 1782
TseFI GTSAC 7 cut(s) 238, 2416, 2464, 2518, 2572, 3289, 3447
Tsp45I GTSAC 7 cut(s) 238, 2416, 2464, 2518, 2572, 3289, 3447
TspGWI ACGGA 2 cut(s) 213, 389
TspRI CASTG 4 cut(s) 1077, 1671, 1701, 1782
Van91I CCANNNNNTGG 1 cut(s) 1085
Vha464I CTTAAG 2 cut(s) 2953, 3602
VneI GTGCAC 1 cut(s) 2090
VpaK11BI GGWCC 2 cut(s) 119, 1967
VspI ATTAAT 2 cut(s) 62, 135
XagI CCTNNNNNAGG 1 cut(s) 3150
XapI RAATTY 9 cut(s) 1202, 1421, 1788, 1856, 1980, 2364, 2734, 3496, 3851
XbaI TCTAGA 1 cut(s) 1174
XceI RCATGY 8 cut(s) 1387, 2142, 2198, 2239, 2691, 3442, 3520, 3844
XhoI CTCGAG 1 cut(s) 2637
XmiI GTMKAC 3 cut(s) 1233, 1632, 1917
XmnI GAANNNNTTC 2 cut(s) 1216, 2345
ZrmI AGTACT 3 cut(s) 910, 981, 2951
Zsp2I ATGCAT 2 cut(s) 1389, 3444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.