Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0022199.1

Orthogroup ID

OG0000657

Physical Location & Seq

Genomic Coordinates Reverse (-)

14505 .. 16476

Gene Structure 1972 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0022199.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ctggaaacgaaggaaagatatggtatcaaatttatcagacgaggcgcattaaaatctgatcctcgatctcctcaacagcataacttgcagaatcatactccagatcctgatacggacttgtcctcccatgtgaccagcattcataattggctgaatcaattgccagctcgagcagcaaaaaagttggaacatgagatcagcttgctgagagatgagttgggccacatgcatagactgttgaaacatacaaatgcggctatatatgctagcaaggttagaaatgcttgcttggagcaattgaagaaaatggccgcggaagcaaagcagtattcagaaacccaaatggaattttcagagaactcaaagcatgtgtccgacatcaagagaatcattgttctccttcggagattcagtcaagcatattccattgaaaaggagcaaccatgctatgcagttggtttggaagaagacacacataaactggtcttacggctaacagaccctggtagagagatcatttccattggaggcatgaagggcattggtaagacaactctggcaaacaaagtctatcaccacggtaccattgcaagccattttaaactccgacgatgggtatctctacctcatcaagggcacgaggaaatagttttaagaagacttgaaaagagtgaagagaaacagagtggaaaagactgggacaagaatgtgcatgatgatctcttgaagaaggagaaataccttctacttttggacaatgtctcatcacaagaagtcttggatgatctcaaacaggagatactcccagcgatggcagaggggagcaagattttagtaaccacaaaccagttggctggcgctgatcaaaatagcactcactacccacttcggctacgaacgcaaaaagaaagctgggagtttttcacccagatggttcacatttctcccaaggaagaagctattgcaaagaaacttgtggcaagaaccggaggcttaccgcttgtgatcttacgtcttgggtatctactgtctatgaaaaaagtgacgtctgagatcgatcaacactattcgaacttgtttgagcatattcttcagggacataaccgaaagccatggtccgatactctggaaatgcatagaaacgatttggaaaatggctactttgaactcttccctggagatttcgaaatccctgcaaggagattagtggctttgtgggttgcaaaggagttatttgaaacagagaatctcgcaaataagcatctgttggagttgattgaccgtaatatgattcaagtcgttcgagagaagcgtaatggggatgtcaagacgtgttgcttgcctcctgcccttcgagaactctggatgcaggacaaaggcgaaaaaattagcagcatagcttattcatggtcccaaagtacaagttcagaacagcagctggtttcctatcattgtgatcgtaacgatgctaccttcaatcgcattcatggtctcaacatgaactcatcaaatggaaagcatccacgctcggttgtcttctttgatactcgagaagggaataaacccggagaggaaataggtgaatttgttcaaaggtgcattgcatgtggtttcttccaaaagcttctggttcttgaccttgaacgtgtattcagacctcagttgccagcgtctatagaaaaattagagcacctgacatatctgggcttgaggtggacttgcttagaggaaatcccgtcacctattggcaacttgatgaagctccgaactctagatttgaagcatacaaatcttcttgctctccctaaatcgatttggaatctgaaagaactcaagcacatatacttcaacaagaattgtcgaatcaaagctagaaccggctggacaagttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009506 GO:0009626 GO:0009987 GO:0012501 GO:0016020 GO:0019897 GO:0019898 GO:0023052 GO:0030054 GO:0033554 GO:0034050 GO:0036094 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0071944 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 NB-ARC

Protein Analysis

630

Amino Acids

72.74

Weight (kDa)

8.97

Isoelectric Point (pI)

51.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000657)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g34770
malus_domestica	MD17G1025700.v1.1
prunus_persica	Prupe.3G040600_v2.0.a1 Prupe.3G040800_v2.0.a1 Prupe.3G041000_v2.0.a1 Prupe.3G041100_v2.0.a1 Prupe.3G041500_v2.0.a1 Prupe.4G109400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037400_v2.0.a1 Prupe.8G037700_v2.0.a1
pyrus_communis	pycom09g10040 pycom17g16000
rosa_chinensis	RchiOBHm_Chr2g0145591 RchiOBHm_Chr2g0145611
rosa_laevigata	RLG00000020146 RLG00000020149 RLG00000020151 RLG00000020154
rosa_multiflora	Rmu_co7986250.1_g000001 Rmu_co8305779.1_g000001 Rmu_sc0002718.1_g000011 Rmu_sc0002835.1_g000009 Rmu_sc0002835.1_g000016 Rmu_sc0003046.1_g000007 Rmu_sc0003046.1_g000010 Rmu_sc0004445.1_g000006 Rmu_sc0004810.1_g000002 Rmu_sc0006477.1_g000008 Rmu_sc0014329.1_g000001 Rmu_sc0020976.1_g000003 Rmu_sc0021168.1_g000001 Rmu_sc0022199.1_g000001 Rmu_sc0036991.1_g000001 Rmu_sc0041497.1_g000003
rosa_roxburghii	Rroxscaffold_152G00434560 Rroxscaffold_152G00434570 Rroxscaffold_152G00434600 Rroxscaffold_152G00434610 Rroxscaffold_2G00100630 Rroxscaffold_2G00100640 Rroxscaffold_2G00100660 Rroxscaffold_2G00100670 Rroxscaffold_2G00100680 Rroxscaffold_2G00100690
rosa_rugosa	Rorug02G0392300 Rorug02G0392400 Rorug02G0392400
rosa_samantha	Rh2AG445700 Rh2AG445800 Rh2AG446000 Rh2AG446100 Rh2AG446300 Rh2AG446600 Rh2BG457400 Rh2BG457500 Rh2BG457600 Rh2BG457900 Rh2BG458300 Rh2CG432300 Rh2CG432400 Rh2CG432500 Rh2CG432700 Rh2CG432900 Rh2CG433000 Rh2CG433300 Rh2DG467100 Rh2DG467200 Rh2DG467300 Rh2DG467600 Rh2DG467900 Rh3DG194100
rosa_wichuraiana	Rw2G036420 Rw2G036450 Rw2G036470 Rw3G014900 Rw3G014920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1049
Acc65I	GGTACC	1 cut(s)	581
AccB1I	GGYRCC	1 cut(s)	581
AccII	CGCG	1 cut(s)	314
AciI	CCGC	4 cut(s)	254, 312, 314, 998
AclWI	GGATC	2 cut(s)	53, 98
AcoI	YGGCCR	1 cut(s)	309
AcsI	RAATTY	3 cut(s)	29, 347, 1583
AcuI	CTGAAG	1 cut(s)	1076
AcyI	GRCGYC	1 cut(s)	1046
AfaI	GTAC	2 cut(s)	583, 1420
AfiI	CCNNNNNNNGG	3 cut(s)	613, 632, 811
AflIII	ACRYGT	2 cut(s)	1331, 1645
AjiI	CACGTC	1 cut(s)	1332
AjnI	CCWGG	2 cut(s)	502, 1174
AluBI	AGCT	9 cut(s)	167, 201, 912, 959, 1400, 1438, 1624, 1762, 1871
AluI	AGCT	9 cut(s)	167, 201, 912, 959, 1400, 1438, 1624, 1762, 1871
Alw21I	GWGCWC	1 cut(s)	1692
Alw26I	GTCTC	2 cut(s)	766, 1496
AlwI	GGATC	2 cut(s)	53, 98
AlwNI	CAGNNNCTG	3 cut(s)	107, 503, 1438
Ama87I	CYCGRG	2 cut(s)	168, 1548
AoxI	GGCC	2 cut(s)	220, 309
ApeKI	GCWGC	3 cut(s)	173, 1392, 1435
ApoI	RAATTY	3 cut(s)	29, 347, 1583
ArsI	GACNNNNNNTTYG	2 cut(s)	356, 388
Asp700I	GAANNNNTTC	1 cut(s)	1587
Asp718I	GGTACC	1 cut(s)	581
AspLEI	GCGC	2 cut(s)	47, 860
AspS9I	GGNCC	3 cut(s)	220, 1116, 1410
AsuC2I	CCSGG	1 cut(s)	1566
AsuHPI	GGTGA	4 cut(s)	566, 916, 1592, 1731
AsuII	TTCGAA	2 cut(s)	1070, 1185
AsuNHI	GCTAGC	1 cut(s)	266
AvaI	CYCGRG	2 cut(s)	168, 1548
AvaII	GGWCC	2 cut(s)	1116, 1410
BaeGI	GKGCMC	1 cut(s)	639
BaeI	ACNNNNGTAYC	2 cut(s)	565, 598
BanI	GGYRCC	1 cut(s)	581
BarI	GAAGNNNNNNTAC	2 cut(s)	722, 754
BauI	CACGAG	1 cut(s)	638
BbsI	GAAGAC	3 cut(s)	474, 664, 1528
Bbv12I	GWGCWC	1 cut(s)	1692
BbvI	GCAGC	3 cut(s)	185, 1404, 1447
BccI	CCATC	3 cut(s)	606, 805, 925
BceAI	ACGGC	1 cut(s)	506
BcgI	CGANNNNNNTGC	2 cut(s)	1175, 1209
BciT130I	CCWGG	2 cut(s)	504, 1176
BclI	TGATCA	1 cut(s)	862
BcnI	CCSGG	1 cut(s)	1566
BcoDI	GTCTC	2 cut(s)	766, 1496
BfaI	CTAG	3 cut(s)	267, 1772, 1872
BfmI	CTRYAG	1 cut(s)	1674
BfoI	RGCGCY	1 cut(s)	861
BisI	GCNGC	5 cut(s)	174, 255, 312, 1393, 1436
BlsI	GCNGC	5 cut(s)	175, 256, 313, 1394, 1437
Bme1390I	CCNGG	3 cut(s)	504, 1176, 1566
Bme18I	GGWCC	2 cut(s)	1116, 1410
BmeT110I	CYCGRG	2 cut(s)	168, 1548
BmgBI	CACGTC	1 cut(s)	1332
BmgT120I	GGNCC	3 cut(s)	220, 1116, 1410
BmiI	GGNNCC	2 cut(s)	583, 1412
BmrFI	CCNGG	3 cut(s)	504, 1176, 1566
BmrI	ACTGGG	1 cut(s)	706
BmsI	GCATC	4 cut(s)	1270, 1356, 1456, 1528
BmtI	GCTAGC	1 cut(s)	270
BmuI	ACTGGG	1 cut(s)	706
BpiI	GAAGAC	3 cut(s)	474, 664, 1528
BpmI	CTGGAG	2 cut(s)	84, 1197
Bpu14I	TTCGAA	2 cut(s)	1070, 1185
BpuEI	CTTGAG	2 cut(s)	1729, 1817
BpuMI	CCSGG	1 cut(s)	1566
Bsa29I	ATCGAT	2 cut(s)	1056, 1811
BsaBI	GATNNNNATC	1 cut(s)	616
BsaHI	GRCGYC	1 cut(s)	1046
BsaI	GGTCTC	1 cut(s)	1496
BsaJI	CCNNGG	6 cut(s)	312, 502, 577, 948, 1112, 1174
BsaWI	WCCGGW	1 cut(s)	986
BsaXI	ACNNNNNCTCC	4 cut(s)	107, 137, 397, 427
Bsc4I	CCNNNNNNNGG	3 cut(s)	613, 632, 811
Bse118I	RCCGGY	1 cut(s)	1877
Bse1I	ACTGG	3 cut(s)	486, 701, 847
Bse3DI	GCAATG	2 cut(s)	585, 1599
Bse8I	GATNNNNATC	1 cut(s)	616
BseBI	CCWGG	2 cut(s)	504, 1176
BseCI	ATCGAT	2 cut(s)	1056, 1811
BseDI	CCNNGG	6 cut(s)	312, 502, 577, 948, 1112, 1174
BseGI	GGATG	4 cut(s)	787, 1327, 1371, 1519
BseJI	GATNNNNATC	1 cut(s)	616
BseLI	CCNNNNNNNGG	3 cut(s)	613, 632, 811
BseMI	GCAATG	2 cut(s)	585, 1599
BseMII	CTCAG	3 cut(s)	197, 1041, 1673
BseNI	ACTGG	3 cut(s)	486, 701, 847
BseRI	GAGGAG	1 cut(s)	60
BseSI	GKGCMC	1 cut(s)	639
BseXI	GCAGC	3 cut(s)	185, 1404, 1447
BseYI	CCCAGC	2 cut(s)	805, 912
Bsh1236I	CGCG	1 cut(s)	314
BshFI	GGCC	2 cut(s)	222, 311
BshNI	GGYRCC	1 cut(s)	581
BshVI	ATCGAT	2 cut(s)	1056, 1811
BsiHKAI	GWGCWC	1 cut(s)	1692
BsiHKCI	CYCGRG	2 cut(s)	168, 1548
BsiSI	CCGG	3 cut(s)	987, 1566, 1878
BslFI	GGGAC	3 cut(s)	713, 1110, 1396
BslI	CCNNNNNNNGG	3 cut(s)	613, 632, 811
BsmAI	GTCTC	2 cut(s)	766, 1496
BsmFI	GGGAC	3 cut(s)	713, 1110, 1396
BsmI	GAATGC	2 cut(s)	138, 1482
BsnI	GGCC	2 cut(s)	222, 311
Bso31I	GGTCTC	1 cut(s)	1496
BsoBI	CYCGRG	2 cut(s)	168, 1548
Bsp119I	TTCGAA	2 cut(s)	1070, 1185
Bsp1286I	GDGCHC	2 cut(s)	639, 1692
Bsp19I	CCATGG	1 cut(s)	1112
BspACI	CCGC	4 cut(s)	254, 312, 314, 998
BspANI	GGCC	2 cut(s)	222, 311
BspCNI	CTCAG	3 cut(s)	198, 1042, 1672
BspDI	ATCGAT	2 cut(s)	1056, 1811
BspFNI	CGCG	1 cut(s)	314
BspLI	GGNNCC	2 cut(s)	583, 1412
BspOI	GCTAGC	1 cut(s)	270
BspPI	GGATC	2 cut(s)	53, 98
BspT104I	TTCGAA	2 cut(s)	1070, 1185
BspT107I	GGYRCC	1 cut(s)	581
BspTNI	GGTCTC	1 cut(s)	1496
BsrDI	GCAATG	2 cut(s)	585, 1599
BsrFI	RCCGGY	1 cut(s)	1877
BsrI	ACTGG	3 cut(s)	486, 701, 847
BssAI	RCCGGY	1 cut(s)	1877
BssECI	CCNNGG	6 cut(s)	312, 502, 577, 948, 1112, 1174
BssNI	GRCGYC	1 cut(s)	1046
BssSI	CACGAG	1 cut(s)	638
BssT1I	CCWWGG	2 cut(s)	948, 1112
Bst2BI	CACGAG	1 cut(s)	638
Bst2UI	CCWGG	2 cut(s)	504, 1176
Bst4CI	ACNGT	4 cut(s)	237, 581, 1029, 1283
Bst6I	CTCTTC	2 cut(s)	669, 1175
BstACI	GRCGYC	1 cut(s)	1046
BstAPI	GCANNNNNTGC	1 cut(s)	85
BstBI	TTCGAA	2 cut(s)	1070, 1185
BstC8I	GCNNGC	8 cut(s)	165, 203, 268, 286, 592, 856, 1340, 1668
BstDEI	CTNAG	4 cut(s)	206, 1050, 1659, 1723
BstDSI	CCRYGG	3 cut(s)	312, 577, 1112
BstENI	CCTNNNNNAGG	1 cut(s)	630
BstF5I	GGATG	4 cut(s)	787, 1327, 1371, 1519
BstFNI	CGCG	1 cut(s)	314
BstH2I	RGCGCY	1 cut(s)	861
BstHHI	GCGC	2 cut(s)	47, 860
BstMAI	GTCTC	2 cut(s)	766, 1496
BstMWI	GCNNNNNNNGC	6 cut(s)	85, 173, 263, 317, 537, 898
BstNI	CCWGG	2 cut(s)	504, 1176
BstNSI	RCATGY	3 cut(s)	229, 371, 1608
BstSCI	CCNGG	3 cut(s)	502, 1174, 1564
BstSFI	CTRYAG	1 cut(s)	1674
BstSLI	GKGCMC	1 cut(s)	639
BstUI	CGCG	1 cut(s)	314
BstV1I	GCAGC	3 cut(s)	185, 1404, 1447
BstV2I	GAAGAC	3 cut(s)	474, 664, 1528
BstX2I	RGATCY	1 cut(s)	103
BstXI	CCANNNNNNTGG	1 cut(s)	854
BstYI	RGATCY	1 cut(s)	103
Bsu15I	ATCGAT	2 cut(s)	1056, 1811
BsuRI	GGCC	2 cut(s)	222, 311
BsuTUI	ATCGAT	2 cut(s)	1056, 1811
BtgI	CCRYGG	3 cut(s)	312, 577, 1112
BtgZI	GCGATG	1 cut(s)	824
BtrI	CACGTC	1 cut(s)	1332
BtsCI	GGATG	4 cut(s)	787, 1327, 1371, 1519
Cac8I	GCNNGC	8 cut(s)	165, 203, 268, 286, 592, 856, 1340, 1668
CaiI	CAGNNNCTG	3 cut(s)	107, 503, 1438
CfoI	GCGC	2 cut(s)	47, 860
Cfr10I	RCCGGY	1 cut(s)	1877
Cfr13I	GGNCC	3 cut(s)	220, 1116, 1410
Cfr42I	CCGCGG	1 cut(s)	315
ClaI	ATCGAT	2 cut(s)	1056, 1811
CseI	GACGC	1 cut(s)	1659
Csp6I	GTAC	2 cut(s)	582, 1419
CviQI	GTAC	2 cut(s)	582, 1419
DdeI	CTNAG	4 cut(s)	206, 1050, 1659, 1723
DraI	TTTAAA	1 cut(s)	601
EaeI	YGGCCR	1 cut(s)	309
Eam1104I	CTCTTC	2 cut(s)	669, 1175
EarI	CTCTTC	2 cut(s)	669, 1175
Eco130I	CCWWGG	2 cut(s)	948, 1112
Eco31I	GGTCTC	1 cut(s)	1496
Eco47I	GGWCC	2 cut(s)	1116, 1410
Eco57I	CTGAAG	1 cut(s)	1076
Eco88I	CYCGRG	2 cut(s)	168, 1548
EcoNI	CCTNNNNNAGG	1 cut(s)	630
EcoRII	CCWGG	2 cut(s)	502, 1174
EcoT14I	CCWWGG	2 cut(s)	948, 1112
EcoT22I	ATGCAT	2 cut(s)	231, 1137
ErhI	CCWWGG	2 cut(s)	948, 1112
FaqI	GGGAC	3 cut(s)	713, 1110, 1396
FbaI	TGATCA	1 cut(s)	862
Fnu4HI	GCNGC	5 cut(s)	174, 255, 312, 1393, 1436
FokI	GGATG	4 cut(s)	794, 1334, 1378, 1506
Fsp4HI	GCNGC	5 cut(s)	174, 255, 312, 1393, 1436
FspBI	CTAG	3 cut(s)	267, 1772, 1872
GlaI	GCGC	2 cut(s)	46, 859
GluI	GCNGC	5 cut(s)	174, 255, 312, 1393, 1436
GsaI	CCCAGC	2 cut(s)	809, 916
GsuI	CTGGAG	2 cut(s)	84, 1197
HaeII	RGCGCY	1 cut(s)	861
HaeIII	GGCC	2 cut(s)	222, 311
HapII	CCGG	3 cut(s)	987, 1566, 1878
HgaI	GACGC	1 cut(s)	1659
HhaI	GCGC	2 cut(s)	47, 860
Hin1I	GRCGYC	1 cut(s)	1046
Hin6I	GCGC	2 cut(s)	45, 858
HinP1I	GCGC	2 cut(s)	45, 858
HindIII	AAGCTT	1 cut(s)	1622
HinfI	GANTC	8 cut(s)	91, 154, 387, 408, 1246, 1291, 1819, 1863
HpaII	CCGG	3 cut(s)	987, 1566, 1878
HphI	GGTGA	4 cut(s)	566, 916, 1592, 1731
Hpy166II	GTNNAC	2 cut(s)	937, 1716
Hpy8I	GTNNAC	2 cut(s)	937, 1716
Hpy99I	CGWCG	1 cut(s)	612
HpyAV	CCTTC	8 cut(s)	4, 410, 529, 724, 752, 1361, 1483, 1547
HpyCH4III	ACNGT	4 cut(s)	237, 581, 1029, 1283
HpyCH4IV	ACGT	4 cut(s)	1012, 1046, 1331, 1645
HpyF10VI	GCNNNNNNNGC	6 cut(s)	85, 173, 263, 317, 537, 898
HpyF3I	CTNAG	4 cut(s)	206, 1050, 1659, 1723
HpySE526I	ACGT	4 cut(s)	1012, 1046, 1331, 1645
Hsp92I	GRCGYC	1 cut(s)	1046
HspAI	GCGC	2 cut(s)	45, 858
KpnI	GGTACC	1 cut(s)	585
Ksp22I	TGATCA	1 cut(s)	862
KspI	CCGCGG	1 cut(s)	315
LmnI	GCTCC	4 cut(s)	292, 436, 822, 1767
Lsp1109I	GCAGC	3 cut(s)	185, 1404, 1447
LweI	GCATC	4 cut(s)	1270, 1356, 1456, 1528
MaeI	CTAG	3 cut(s)	267, 1772, 1872
MaeII	ACGT	4 cut(s)	1012, 1046, 1331, 1645
MaeIII	GTNAC	5 cut(s)	130, 835, 1042, 1460, 1737
MfeI	CAATTG	2 cut(s)	158, 296
MflI	RGATCY	1 cut(s)	103
MhlI	GDGCHC	2 cut(s)	639, 1692
MluCI	AATT	9 cut(s)	29, 145, 158, 296, 347, 1386, 1583, 1682, 1855
MmeI	TCCRAC	4 cut(s)	165, 399, 631, 1248
Mph1103I	ATGCAT	2 cut(s)	231, 1137
MroXI	GAANNNNTTC	1 cut(s)	1587
MseI	TTAA	3 cut(s)	50, 600, 653
MslI	CAYNNNNRTG	2 cut(s)	249, 929
MspA1I	CMGCKG	2 cut(s)	314, 1438
MspI	CCGG	3 cut(s)	987, 1566, 1878
MspR9I	CCNGG	3 cut(s)	504, 1176, 1566
MunI	CAATTG	2 cut(s)	158, 296
Mva1269I	GAATGC	2 cut(s)	138, 1482
MvaI	CCWGG	2 cut(s)	504, 1176
MvnI	CGCG	1 cut(s)	314
MwoI	GCNNNNNNNGC	6 cut(s)	85, 173, 263, 317, 537, 898
NciI	CCSGG	1 cut(s)	1566
NcoI	CCATGG	1 cut(s)	1112
NheI	GCTAGC	1 cut(s)	266
NlaIV	GGNNCC	2 cut(s)	583, 1412
NmuCI	GTSAC	3 cut(s)	130, 1042, 1737
NsiI	ATGCAT	2 cut(s)	231, 1137
NspI	RCATGY	3 cut(s)	229, 371, 1608
NspV	TTCGAA	2 cut(s)	1070, 1185
PaeR7I	CTCGAG	2 cut(s)	168, 1548
PcsI	WCGNNNNNNNCGW	1 cut(s)	1309
PctI	GAATGC	2 cut(s)	138, 1482
PdmI	GAANNNNTTC	1 cut(s)	1587
PfeI	GAWTC	8 cut(s)	91, 154, 387, 408, 1246, 1291, 1819, 1863
PflFI	GACNNNGTC	1 cut(s)	758
PkrI	GCNGC	5 cut(s)	175, 256, 313, 1394, 1437
Psp6I	CCWGG	2 cut(s)	502, 1174
PspFI	CCCAGC	2 cut(s)	805, 912
PspGI	CCWGG	2 cut(s)	502, 1174
PspN4I	GGNNCC	2 cut(s)	583, 1412
PspPI	GGNCC	3 cut(s)	220, 1116, 1410
PspXI	VCTCGAGB	1 cut(s)	168
PstNI	CAGNNNCTG	3 cut(s)	107, 503, 1438
PsuI	RGATCY	1 cut(s)	103
PsyI	GACNNNGTC	1 cut(s)	758
PvuII	CAGCTG	1 cut(s)	1438
RsaI	GTAC	2 cut(s)	583, 1420
RsaNI	GTAC	2 cut(s)	582, 1419
RseI	CAYNNNNRTG	2 cut(s)	249, 929
SacII	CCGCGG	1 cut(s)	315
SaqAI	TTAA	3 cut(s)	50, 600, 653
SatI	GCNGC	5 cut(s)	174, 255, 312, 1393, 1436
Sau96I	GGNCC	3 cut(s)	220, 1116, 1410
ScrFI	CCNGG	3 cut(s)	504, 1176, 1566
SduI	GDGCHC	2 cut(s)	639, 1692
SfaNI	GCATC	4 cut(s)	1270, 1356, 1456, 1528
SfcI	CTRYAG	1 cut(s)	1674
Sfr274I	CTCGAG	2 cut(s)	168, 1548
Sfr303I	CCGCGG	1 cut(s)	315
SfuI	TTCGAA	2 cut(s)	1070, 1185
SgrBI	CCGCGG	1 cut(s)	315
SinI	GGWCC	2 cut(s)	1116, 1410
SlaI	CTCGAG	2 cut(s)	168, 1548
SmiMI	CAYNNNNRTG	2 cut(s)	249, 929
SmlI	CTYRAG	4 cut(s)	168, 1548, 1708, 1832
SmoI	CTYRAG	4 cut(s)	168, 1548, 1708, 1832
Sse9I	AATT	9 cut(s)	29, 145, 158, 296, 347, 1386, 1583, 1682, 1855
SsiI	CCGC	4 cut(s)	254, 312, 314, 998
SspMI	CTAG	3 cut(s)	267, 1772, 1872
StyD4I	CCNGG	3 cut(s)	502, 1174, 1564
StyI	CCWWGG	2 cut(s)	948, 1112
TaaI	ACNGT	4 cut(s)	237, 581, 1029, 1283
TaiI	ACGT	4 cut(s)	1015, 1049, 1334, 1648
TasI	AATT	9 cut(s)	29, 145, 158, 296, 347, 1386, 1583, 1682, 1855
TatI	WGTACW	1 cut(s)	1418
TauI	GCSGC	2 cut(s)	257, 314
TfiI	GAWTC	8 cut(s)	91, 154, 387, 408, 1246, 1291, 1819, 1863
Tru1I	TTAA	3 cut(s)	50, 600, 653
Tru9I	TTAA	3 cut(s)	50, 600, 653
TseFI	GTSAC	3 cut(s)	130, 1042, 1737
TseI	GCWGC	3 cut(s)	173, 1392, 1435
Tsp45I	GTSAC	3 cut(s)	130, 1042, 1737
TspDTI	ATGAA	7 cut(s)	131, 548, 1049, 1395, 1475, 1514, 1772
TspGWI	ACGGA	1 cut(s)	128
Tth111I	GACNNNGTC	1 cut(s)	758
VpaK11BI	GGWCC	2 cut(s)	1116, 1410
XagI	CCTNNNNNAGG	1 cut(s)	630
XapI	RAATTY	3 cut(s)	29, 347, 1583
XbaI	TCTAGA	1 cut(s)	1771
XceI	RCATGY	3 cut(s)	229, 371, 1608
XcmI	CCANNNNNNNNNTGG	1 cut(s)	847
XhoI	CTCGAG	2 cut(s)	168, 1548
XmnI	GAANNNNTTC	1 cut(s)	1587
XspI	CTAG	3 cut(s)	267, 1772, 1872
ZraI	GACGTC	1 cut(s)	1047
Zsp2I	ATGCAT	2 cut(s)	231, 1137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.