pycom17g23220

Pre-mRNA-splicing factor ATP-dependent RNA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000671
Physical Location & Seq
Forward (+)
21639483 .. 21641162
1680 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1680 bp
ATGGCGGCCGCCGACGACGGTCTGAAGAAGTTGGAGTACCTTTCGCTGGTCTCCAAAGTCTGTTCAGAGCTCGAAACGCATCTAGGGTTTGGGGACAAAGTTCTGGCGGAGTTCATCACCGAAATCGGACGGAGCTGTGAGACGGTGGACGAATTCGACGCCCGATTGAAGGAGAACGGCGCAGAGATGCCCGACTATTTTGTCCGTACACTCCTCACTATCATCCACGCAATCCTCCCTCCGAAGCCGAAGCCGGAGAAGGACGCCTCGAAGAAAGACGGCGCTTCTGAAGGTAAGAAAACCAAGTTTAAGGCTTTGGCTATTGCTGATAATAGAGATAGAGTTAAGGAGATTGATAAGGAAATTGAGATGGAGACTAGGGAGAAGCACTCAGGCGGAGAGGAGCGGGACGGAGAGCGTGAAGACGATAGGCGGAGGGGTCGGGATAGATATAGGGATGGAGATAGAGATAGAGATAGAGATCGAGATCGAGATCGAGATCATGATAGGCACAGAGGTAGGGAAAGAGATGGGAGAGGCAGGGGAAGGGATAGGCATGATAGAGACGAGAGGCGTAGAGATTCACATTATAATGATGATGATGGGGAAAGAGGGAGGCGTGCAGATCGATACGATAAGCCTAAGAGAGATGGGTACGAAGAGAATGGAATTGAAAGAGAAGATGGTGATGATAGGAGAGGTAATAGGGATAGGGGGAATGGTCCTAGAAAGAACCTTTCCGATGAACCCGAATTGTACCAGGTGTATAAGGGTAGGGTTTCGAGAGTGATGGACACCGGTTGCTTTGTTCAGTTAAATGATTTGAGAGGGAAGGAAGGTTTGGTTCATGTTTCACAGATGGCAACTCGGCGAATTAGTAATGCTAAGGATGTGGTGAAGAGGGATCAGGAAGTTTATGTTAAGGTGATTTCTGTTTCGGGTCAGAAGTTGAGCCTTTCAATGAGGGATGTTGATCAGCATTCTGGGAAGGATTTGCTTCCGTTGAAGAAGAGCTCAGAGGAGGATGCTCATAGGACCAACAAGTCGGTGTCCAGAGACGGACCTGTGACTAGGACTGGTCTTTCTGGGATTAGGATTGTGGAAGAGGATGATGTTGGTCCATCGCGCCGGCCATTGAAGCGAATGAGCTCACCTGAGAAGTGGGAAGCCAAACAGTTAATTGCCTCAGGTGTTTTGGGTGTGACAGAGTACCCAATGTATGATGATGAAGCAGATGGGATGCTATATCAAGAAGAGGGAGCTGAGGAAGAGCTTGAGATTGAGATCAATGAGGATGAGCCGGCATTTTTAAATGGGCAGACCAGGTATTCTGTGGATATGTCCCCTGTAAAAATCTTTAAGAATCCAGAAGGGTCTTTGAGTCGTGCAGCTGCACTTCAGTCTGCACTCATTAAGGAGCGTAGAGAAGTGCGAGAGCAGCAGCAAAGAACCATGTTGGATTCCATCCCAAAGGATCTGAATCGTCCCTGGGAAGATCGATCGTCTCAATGCCAGAGACTGGTGAGAGGCATCTTGCCCAGGAGCTTAGAGGTGTTGGTTTGTCTGCATATGATATGCCCGAGTGGAAGAAGGATGCTTTTGGGAAAACCATCAGCTTTGGGCAGAGGTCTAAGCTATCAATTCAGGAACAGAGGCAGAGCTTGCCTATATACAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
DEAD HA2 Helicase_C OB_NTP_bind S1

Protein Analysis

560

Amino Acids

64.17

Weight (kDa)

6.88

Isoelectric Point (pI)

45.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S1 PF00575 251 - 321 6.2e-13 S1 RNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000671)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G26560
fragaria_vesca FvH4_3g44820 FvH4_4g07500 FvH4_4g07500 FvH4_4g07500 FvH4_4g07850 FvH4_4g07850 FvH4_7g12750
malus_domestica MD09G1231900.v1.1 MD15G1068900.v1.1 MD15G1069000.v1.1 MD16G1254900.v1.1 MD17G1229800.v1.1
prunus_persica Prupe.1G082300_v2.0.a1 Prupe.1G368500_v2.0.a1 Prupe.1G422500_v2.0.a1 Prupe.2G077500_v2.0.a1 Prupe.2G077900_v2.0.a1 Prupe.2G077900_v2.0.a1 Prupe.2G078200_v2.0.a1
pyrus_communis pycom08g06730 pycom09g15120 pycom15g06530 pycom16g21640 pycom17g23220 pycom17g23230 pycom17g23240
rosa_chinensis RchiOBHm_Chr1g0351781 RchiOBHm_Chr4g0400041 RchiOBHm_Chr4g0401121 RchiOBHm_Chr5g0079971 RchiOBHm_Chr5g0081521 RchiOBHm_Chr7g0219091
rosa_laevigata RLG00000009162 RLG00000009217 RLG00000028384 RLG00000036944
rosa_multiflora Rmu_co8434143.1_g000001 Rmu_sc0001909.1_g000017 Rmu_sc0001909.1_g000025 Rmu_sc0001933.1_g000012 Rmu_sc0004005.1_g000001 Rmu_sc0007702.1_g000002 Rmu_sc0010608.1_g000004
rosa_roxburghii Rroxscaffold_1G00002030 Rroxscaffold_4G00303550 Rroxscaffold_5G00345000 Rroxscaffold_5G00345950 Rroxscaffold_5G00345970
rosa_rugosa Rorug01G0221400 Rorug01G0221500 Rorug04G0022300 Rorug04G0022400 Rorug04G0028000 Rorug05G0476900
rosa_samantha Rh1AG235400 Rh1BG205800 Rh1CG220000 Rh1DG232900 Rh2AG475800 Rh2BG083000 Rh2CG085000 Rh4AG097800 Rh4AG105600 Rh4AG109800 Rh4BG095800 Rh4CG107200 Rh4CG114200 Rh4DG092600 Rh4DG097800 Rh5BG553100 Rh5DG563200
rosa_wichuraiana Rw1G020490 Rw4G008160 Rw4G008530 Rw5G049150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 591
AasI GACNNNNNNGTC 2 cut(s) 200, 1042
AccB7I CCANNNNNTGG 1 cut(s) 1519
AccBSI CCGCTC 1 cut(s) 406
AccII CGCG 1 cut(s) 1126
AciI CCGC 6 cut(s) 5, 9, 107, 396, 406, 433
AclWI GGATC 2 cut(s) 912, 1482
AcoI YGGCCR 2 cut(s) 6, 1130
AcsI RAATTY 1 cut(s) 152
AcuI CTGAAG 3 cut(s) 44, 309, 1382
AcyI GRCGYC 2 cut(s) 159, 264
AfaI GTAC 5 cut(s) 38, 208, 656, 758, 1211
AfiI CCNNNNNNNGG 3 cut(s) 46, 169, 1519
AgeI ACCGGT 1 cut(s) 797
AgsI TTSAA 5 cut(s) 169, 674, 960, 1006, 1138
AjnI CCWGG 4 cut(s) 759, 1322, 1487, 1538
AjuI GAANNNNNNNTTGG 2 cut(s) 824, 856
Alw21I GWGCWC 3 cut(s) 72, 1016, 1151
Alw26I GTCTC 7 cut(s) 55, 134, 368, 558, 1050, 1509, 1510
AlwI GGATC 2 cut(s) 912, 1482
AlwNI CAGNNNCTG 1 cut(s) 1519
Ama87I CYCGRG 1 cut(s) 1579
AoxI GGCC 2 cut(s) 6, 1130
ApeKI GCWGC 4 cut(s) 1388, 1391, 1438, 1441
ApoI RAATTY 1 cut(s) 152
AsiGI ACCGGT 1 cut(s) 797
AspLEI GCGC 3 cut(s) 182, 284, 1128
AspS9I GGNCC 4 cut(s) 722, 1035, 1061, 1118
AsuHPI GGTGA 6 cut(s) 109, 698, 907, 937, 1143, 1534
AvaI CYCGRG 1 cut(s) 1579
AvaII GGWCC 4 cut(s) 722, 1035, 1061, 1118
AxyI CCTNAGG 1 cut(s) 1186
BanII GRGCYC 3 cut(s) 72, 1016, 1151
BarI GAAGNNNNNNTAC 2 cut(s) 20, 52
BbsI GAAGAC 1 cut(s) 429
Bbv12I GWGCWC 3 cut(s) 72, 1016, 1151
BbvCI CCTCAGC 1 cut(s) 1263
BbvI GCAGC 4 cut(s) 1378, 1400, 1450, 1453
BceAI ACGGC 2 cut(s) 193, 295
BciT130I CCWGG 4 cut(s) 761, 1324, 1489, 1540
BclI TGATCA 1 cut(s) 973
BcoDI GTCTC 7 cut(s) 55, 134, 368, 558, 1050, 1509, 1510
BfaI CTAG 4 cut(s) 83, 378, 726, 1071
BfoI RGCGCY 1 cut(s) 285
BisI GCNGC 6 cut(s) 6, 9, 1389, 1392, 1439, 1442
BlsI GCNGC 6 cut(s) 7, 10, 1390, 1393, 1440, 1443
Bme1390I CCNGG 4 cut(s) 761, 1324, 1489, 1540
Bme18I GGWCC 4 cut(s) 722, 1035, 1061, 1118
BmeT110I CYCGRG 1 cut(s) 1579
BmgT120I GGNCC 4 cut(s) 722, 1035, 1061, 1118
BmrFI CCNGG 4 cut(s) 761, 1324, 1489, 1540
BmsI GCATC 6 cut(s) 88, 177, 1015, 1230, 1539, 1584
BoxI GACNNNNGTC 1 cut(s) 18
BpiI GAAGAC 1 cut(s) 429
BplI GAGNNNNNCTC 2 cut(s) 374, 406
Bpu10I CCTNAGC 2 cut(s) 885, 1263
BpuEI CTTGAG 1 cut(s) 1295
Bsa29I ATCGAT 2 cut(s) 628, 1498
BsaBI GATNNNNATC 7 cut(s) 480, 486, 492, 498, 972, 1283, 1479
BsaHI GRCGYC 2 cut(s) 159, 264
BsaI GGTCTC 1 cut(s) 55
BsaJI CCNNGG 3 cut(s) 1487, 1488, 1538
BsaWI WCCGGW 1 cut(s) 797
Bsc4I CCNNNNNNNGG 3 cut(s) 46, 169, 1519
Bse118I RCCGGY 3 cut(s) 797, 1128, 1300
Bse1I ACTGG 2 cut(s) 1081, 1524
Bse21I CCTNAGG 1 cut(s) 1186
Bse8I GATNNNNATC 7 cut(s) 480, 486, 492, 498, 972, 1283, 1479
BseBI CCWGG 4 cut(s) 761, 1324, 1489, 1540
BseCI ATCGAT 2 cut(s) 628, 1498
BseDI CCNNGG 3 cut(s) 1487, 1488, 1538
BseJI GATNNNNATC 7 cut(s) 480, 486, 492, 498, 972, 1283, 1479
BseLI CCNNNNNNNGG 3 cut(s) 46, 169, 1519
BseMII CTCAG 5 cut(s) 405, 1029, 1146, 1200, 1254
BseNI ACTGG 2 cut(s) 1081, 1524
BseRI GAGGAG 3 cut(s) 203, 416, 1034
BseX3I CGGCCG 1 cut(s) 6
BseXI GCAGC 4 cut(s) 1378, 1400, 1450, 1453
BsgI GTGCAG 4 cut(s) 642, 1377, 1389, 1407
Bsh1236I CGCG 1 cut(s) 1126
Bsh1285I CGRYCG 2 cut(s) 9, 1502
BshFI GGCC 2 cut(s) 8, 1132
BshTI ACCGGT 1 cut(s) 797
BshVI ATCGAT 2 cut(s) 628, 1498
BsiEI CGRYCG 2 cut(s) 9, 1502
BsiHKAI GWGCWC 3 cut(s) 72, 1016, 1151
BsiHKCI CYCGRG 1 cut(s) 1579
BsiSI CCGG 4 cut(s) 254, 798, 1129, 1301
BslFI GGGAC 4 cut(s) 107, 422, 1327, 1470
BslI CCNNNNNNNGG 3 cut(s) 46, 169, 1519
BsmAI GTCTC 7 cut(s) 55, 134, 368, 558, 1050, 1509, 1510
BsmBI CGTCTC 4 cut(s) 134, 558, 1050, 1509
BsmFI GGGAC 4 cut(s) 107, 422, 1327, 1470
BsmI GAATGC 1 cut(s) 979
BsnI GGCC 2 cut(s) 8, 1132
Bso31I GGTCTC 1 cut(s) 55
BsoBI CYCGRG 1 cut(s) 1579
Bsp1286I GDGCHC 3 cut(s) 72, 1016, 1151
BspACI CCGC 6 cut(s) 5, 9, 107, 396, 406, 433
BspANI GGCC 2 cut(s) 8, 1132
BspCNI CTCAG 5 cut(s) 404, 1028, 1147, 1199, 1255
BspDI ATCGAT 2 cut(s) 628, 1498
BspFNI CGCG 1 cut(s) 1126
BspHI TCATGA 1 cut(s) 502
BspPI GGATC 2 cut(s) 912, 1482
BspQI GCTCTTC 2 cut(s) 1004, 1263
BspTNI GGTCTC 1 cut(s) 55
BsrBI CCGCTC 1 cut(s) 406
BsrFI RCCGGY 3 cut(s) 797, 1128, 1300
BsrI ACTGG 2 cut(s) 1081, 1524
BssAI RCCGGY 3 cut(s) 797, 1128, 1300
BssECI CCNNGG 3 cut(s) 1487, 1488, 1538
BssNI GRCGYC 2 cut(s) 159, 264
Bst2UI CCWGG 4 cut(s) 761, 1324, 1489, 1540
Bst4CI ACNGT 3 cut(s) 20, 145, 1176
Bst6I CTCTTC 6 cut(s) 654, 893, 1004, 1098, 1248, 1263
BstACI GRCGYC 2 cut(s) 159, 264
BstAPI GCANNNNNTGC 1 cut(s) 1662
BstC8I GCNNGC 4 cut(s) 621, 1130, 1302, 1663
BstDEI CTNAG 9 cut(s) 391, 642, 885, 1015, 1155, 1186, 1263, 1546, 1631
BstFNI CGCG 1 cut(s) 1126
BstH2I RGCGCY 1 cut(s) 285
BstHHI GCGC 3 cut(s) 182, 284, 1128
BstMAI GTCTC 7 cut(s) 55, 134, 368, 558, 1050, 1509, 1510
BstMCI CGRYCG 2 cut(s) 9, 1502
BstMWI GCNNNNNNNGC 4 cut(s) 76, 1138, 1438, 1662
BstNI CCWGG 4 cut(s) 761, 1324, 1489, 1540
BstPAI GACNNNNGTC 1 cut(s) 18
BstSCI CCNGG 4 cut(s) 759, 1322, 1487, 1538
BstUI CGCG 1 cut(s) 1126
BstV1I GCAGC 4 cut(s) 1378, 1400, 1450, 1453
BstV2I GAAGAC 1 cut(s) 429
BstX2I RGATCY 1 cut(s) 1474
BstYI RGATCY 1 cut(s) 1474
BstZI CGGCCG 1 cut(s) 6
Bsu15I ATCGAT 2 cut(s) 628, 1498
Bsu36I CCTNAGG 1 cut(s) 1186
BsuRI GGCC 2 cut(s) 8, 1132
BsuTUI ATCGAT 2 cut(s) 628, 1498
BtgZI GCGATG 1 cut(s) 1107
Cac8I GCNNGC 4 cut(s) 621, 1130, 1302, 1663
CaiI CAGNNNCTG 1 cut(s) 1519
CciI TCATGA 1 cut(s) 502
CciNI GCGGCCGC 1 cut(s) 6
CfoI GCGC 3 cut(s) 182, 284, 1128
Cfr10I RCCGGY 3 cut(s) 797, 1128, 1300
Cfr13I GGNCC 4 cut(s) 722, 1035, 1061, 1118
ClaI ATCGAT 2 cut(s) 628, 1498
CseI GACGC 2 cut(s) 167, 272
CsiI ACCWGGT 2 cut(s) 759, 1322
Csp6I GTAC 5 cut(s) 37, 207, 655, 757, 1210
CspAI ACCGGT 1 cut(s) 797
CviAII CATG 4 cut(s) 503, 557, 848, 1453
CviQI GTAC 5 cut(s) 37, 207, 655, 757, 1210
DdeI CTNAG 9 cut(s) 391, 642, 885, 1015, 1155, 1186, 1263, 1546, 1631
DraI TTTAAA 1 cut(s) 1311
DrdI GACNNNNNNGTC 2 cut(s) 200, 1042
DseDI GACNNNNNNGTC 2 cut(s) 200, 1042
EaeI YGGCCR 2 cut(s) 6, 1130
EagI CGGCCG 1 cut(s) 6
Eam1104I CTCTTC 6 cut(s) 654, 893, 1004, 1098, 1248, 1263
EarI CTCTTC 6 cut(s) 654, 893, 1004, 1098, 1248, 1263
EciI GGCGGA 3 cut(s) 122, 411, 448
Ecl136II GAGCTC 3 cut(s) 70, 1014, 1149
EclXI CGGCCG 1 cut(s) 6
Eco24I GRGCYC 3 cut(s) 72, 1016, 1151
Eco31I GGTCTC 1 cut(s) 55
Eco47I GGWCC 4 cut(s) 722, 1035, 1061, 1118
Eco52I CGGCCG 1 cut(s) 6
Eco53kI GAGCTC 3 cut(s) 70, 1014, 1149
Eco57I CTGAAG 3 cut(s) 44, 309, 1382
Eco81I CCTNAGG 1 cut(s) 1186
Eco88I CYCGRG 1 cut(s) 1579
EcoICRI GAGCTC 3 cut(s) 70, 1014, 1149
EcoRI GAATTC 1 cut(s) 152
EcoRII CCWGG 4 cut(s) 759, 1322, 1487, 1538
EcoT38I GRGCYC 3 cut(s) 72, 1016, 1151
Esp3I CGTCTC 4 cut(s) 134, 558, 1050, 1509
FaeI CATG 4 cut(s) 506, 560, 851, 1456
FaqI GGGAC 4 cut(s) 107, 422, 1327, 1470
FatI CATG 4 cut(s) 502, 556, 847, 1452
FauI CCCGC 1 cut(s) 399
FauNDI CATATG 1 cut(s) 1569
FbaI TGATCA 1 cut(s) 973
Fnu4HI GCNGC 6 cut(s) 6, 9, 1389, 1392, 1439, 1442
FriOI GRGCYC 3 cut(s) 72, 1016, 1151
Fsp4HI GCNGC 6 cut(s) 6, 9, 1389, 1392, 1439, 1442
FspBI CTAG 4 cut(s) 83, 378, 726, 1071
GlaI GCGC 3 cut(s) 181, 283, 1127
GluI GCNGC 6 cut(s) 6, 9, 1389, 1392, 1439, 1442
HaeII RGCGCY 1 cut(s) 285
HaeIII GGCC 2 cut(s) 8, 1132
HapII CCGG 4 cut(s) 254, 798, 1129, 1301
HgaI GACGC 2 cut(s) 167, 272
HhaI GCGC 3 cut(s) 182, 284, 1128
Hin1I GRCGYC 2 cut(s) 159, 264
Hin1II CATG 4 cut(s) 506, 560, 851, 1456
Hin6I GCGC 3 cut(s) 180, 282, 1126
HinP1I GCGC 3 cut(s) 180, 282, 1126
HinfI GANTC 5 cut(s) 581, 1363, 1381, 1460, 1480
HpaII CCGG 4 cut(s) 254, 798, 1129, 1301
HphI GGTGA 6 cut(s) 109, 698, 907, 937, 1143, 1534
Hpy166II GTNNAC 2 cut(s) 148, 209
Hpy188I TCNGA 9 cut(s) 24, 67, 128, 243, 289, 742, 945, 1018, 1479
Hpy8I GTNNAC 2 cut(s) 148, 209
Hpy99I CGWCG 3 cut(s) 17, 20, 161
HpyAV CCTTC 9 cut(s) 163, 253, 284, 540, 826, 830, 982, 1364, 1584
HpyCH4III ACNGT 3 cut(s) 20, 145, 1176
HpyCH4V TGCA 5 cut(s) 623, 1388, 1394, 1406, 1567
HpyF10VI GCNNNNNNNGC 4 cut(s) 76, 1138, 1438, 1662
HpyF3I CTNAG 9 cut(s) 391, 642, 885, 1015, 1155, 1186, 1263, 1546, 1631
Hsp92I GRCGYC 2 cut(s) 159, 264
Hsp92II CATG 4 cut(s) 506, 560, 851, 1456
HspAI GCGC 3 cut(s) 180, 282, 1126
KroI GCCGGC 2 cut(s) 1128, 1300
KroNI GCCGGC 2 cut(s) 1130, 1302
Ksp22I TGATCA 1 cut(s) 973
LguI GCTCTTC 2 cut(s) 1004, 1263
LmnI GCTCC 5 cut(s) 132, 403, 1259, 1417, 1542
Lsp1109I GCAGC 4 cut(s) 1378, 1400, 1450, 1453
LweI GCATC 6 cut(s) 88, 177, 1015, 1230, 1539, 1584
MabI ACCWGGT 2 cut(s) 759, 1322
MaeI CTAG 4 cut(s) 83, 378, 726, 1071
MaeIII GTNAC 2 cut(s) 1066, 1201
MbiI CCGCTC 1 cut(s) 406
MflI RGATCY 1 cut(s) 1474
MhlI GDGCHC 3 cut(s) 72, 1016, 1151
MluCI AATT 7 cut(s) 152, 363, 669, 752, 873, 1179, 1640
MlyI GAGTC 1 cut(s) 1390
MmeI TCCRAC 2 cut(s) 12, 1437
MroNI GCCGGC 2 cut(s) 1128, 1300
MseI TTAA 8 cut(s) 309, 345, 815, 921, 1178, 1310, 1359, 1413
MslI CAYNNNNRTG 1 cut(s) 591
MspA1I CMGCKG 1 cut(s) 1391
MspI CCGG 4 cut(s) 254, 798, 1129, 1301
MspR9I CCNGG 4 cut(s) 761, 1324, 1489, 1540
Mva1269I GAATGC 1 cut(s) 979
MvaI CCWGG 4 cut(s) 761, 1324, 1489, 1540
MvnI CGCG 1 cut(s) 1126
MwoI GCNNNNNNNGC 4 cut(s) 76, 1138, 1438, 1662
NaeI GCCGGC 2 cut(s) 1130, 1302
NdeI CATATG 1 cut(s) 1569
NgoMIV GCCGGC 2 cut(s) 1128, 1300
NlaIII CATG 4 cut(s) 506, 560, 851, 1456
NmeAIII GCCGAG 1 cut(s) 847
NmuCI GTSAC 2 cut(s) 1066, 1201
NotI GCGGCCGC 1 cut(s) 6
PagI TCATGA 1 cut(s) 502
PasI CCCWGGG 1 cut(s) 1488
PciSI GCTCTTC 2 cut(s) 1004, 1263
PctI GAATGC 1 cut(s) 979
PdiI GCCGGC 2 cut(s) 1130, 1302
PfeI GAWTC 4 cut(s) 581, 1363, 1460, 1480
PflMI CCANNNNNTGG 1 cut(s) 1519
PinAI ACCGGT 1 cut(s) 797
PkrI GCNGC 6 cut(s) 7, 10, 1390, 1393, 1440, 1443
Ple19I CGATCG 1 cut(s) 1502
PleI GAGTC 1 cut(s) 1389
PpsI GAGTC 1 cut(s) 1389
PshAI GACNNNNGTC 1 cut(s) 18
PsiI TTATAA 1 cut(s) 591
Psp124BI GAGCTC 3 cut(s) 72, 1016, 1151
Psp6I CCWGG 4 cut(s) 759, 1322, 1487, 1538
PspGI CCWGG 4 cut(s) 759, 1322, 1487, 1538
PspPI GGNCC 4 cut(s) 722, 1035, 1061, 1118
PstNI CAGNNNCTG 1 cut(s) 1519
PsuI RGATCY 1 cut(s) 1474
PvuI CGATCG 1 cut(s) 1502
PvuII CAGCTG 1 cut(s) 1391
RsaI GTAC 5 cut(s) 38, 208, 656, 758, 1211
RsaNI GTAC 5 cut(s) 37, 207, 655, 757, 1210
RseI CAYNNNNRTG 1 cut(s) 591
SacI GAGCTC 3 cut(s) 72, 1016, 1151
SapI GCTCTTC 2 cut(s) 1004, 1263
SaqAI TTAA 8 cut(s) 309, 345, 815, 921, 1178, 1310, 1359, 1413
SatI GCNGC 6 cut(s) 6, 9, 1389, 1392, 1439, 1442
Sau96I GGNCC 4 cut(s) 722, 1035, 1061, 1118
SchI GAGTC 1 cut(s) 1390
ScrFI CCNGG 4 cut(s) 761, 1324, 1489, 1540
SduI GDGCHC 3 cut(s) 72, 1016, 1151
SexAI ACCWGGT 2 cut(s) 759, 1322
SfaNI GCATC 6 cut(s) 88, 177, 1015, 1230, 1539, 1584
SinI GGWCC 4 cut(s) 722, 1035, 1061, 1118
SmiMI CAYNNNNRTG 1 cut(s) 591
SmlI CTYRAG 1 cut(s) 1274
SmoI CTYRAG 1 cut(s) 1274
Sse9I AATT 7 cut(s) 152, 363, 669, 752, 873, 1179, 1640
SsiI CCGC 6 cut(s) 5, 9, 107, 396, 406, 433
SspMI CTAG 4 cut(s) 83, 378, 726, 1071
SstI GAGCTC 3 cut(s) 72, 1016, 1151
StyD4I CCNGG 4 cut(s) 759, 1322, 1487, 1538
TaaI ACNGT 3 cut(s) 20, 145, 1176
TaqI TCGA 9 cut(s) 72, 156, 269, 484, 490, 496, 628, 782, 1498
TasI AATT 7 cut(s) 152, 363, 669, 752, 873, 1179, 1640
TauI GCSGC 2 cut(s) 8, 11
TfiI GAWTC 4 cut(s) 581, 1363, 1460, 1480
Tru1I TTAA 8 cut(s) 309, 345, 815, 921, 1178, 1310, 1359, 1413
Tru9I TTAA 8 cut(s) 309, 345, 815, 921, 1178, 1310, 1359, 1413
TseFI GTSAC 2 cut(s) 1066, 1201
TseI GCWGC 4 cut(s) 1388, 1391, 1438, 1441
Tsp45I GTSAC 2 cut(s) 1066, 1201
TspDTI ATGAA 4 cut(s) 103, 759, 836, 1242
TspGWI ACGGA 5 cut(s) 145, 194, 426, 990, 1074
Van91I CCANNNNNTGG 1 cut(s) 1519
VpaK11BI GGWCC 4 cut(s) 722, 1035, 1061, 1118
XapI RAATTY 1 cut(s) 152
XcmI CCANNNNNNNNNTGG 1 cut(s) 1330
XspI CTAG 4 cut(s) 83, 378, 726, 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.