RchiOBHm_Chr7g0233931

water dikinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
58485068 .. 58486100
1033 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20967

Sequence Viewer

Length: 255 bp
ATGCTGAGGATGTGGAAGGATATGCAGATGCTGGGCTTTATGACAGGTTTTGTAATCATGGATAAGGAGGAGAAGATTGTATTGGATTACACAAGCGACCGGATGATCATTGATAGGGCCTTCCAGGTTTCACTCTTCTCAAGAATTGCAGAGTTGGGAAAGATATTAGAAGGCCTTTTTGGTTGTCCTCAGGACATTGGAGGAGCGGTAAAAGATGGATTGATATATGTAGTTCAGTCAAGGCCACAAATCTAA

Protein Analysis

84

Amino Acids

9.61

Weight (kDa)

5.23

Isoelectric Point (pI)

28.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 206
AciI CCGC 1 cut(s) 206
AjnI CCWGG 1 cut(s) 123
AjuI GAANNNNNNNTTGG 4 cut(s) 65, 97, 162, 194
AlwNI CAGNNNCTG 1 cut(s) 31
AoxI GGCC 3 cut(s) 117, 172, 242
AspS9I GGNCC 1 cut(s) 117
AxyI CCTNAGG 1 cut(s) 189
BbvCI CCTCAGC 1 cut(s) 5
BccI CCATC 1 cut(s) 209
BciT130I CCWGG 1 cut(s) 125
BclI TGATCA 1 cut(s) 105
Bme1390I CCNGG 1 cut(s) 125
BmgT120I GGNCC 1 cut(s) 117
BmrFI CCNGG 1 cut(s) 125
BmsI GCATC 1 cut(s) 18
Bpu10I CCTNAGC 1 cut(s) 5
BpuEI CTTGAG 1 cut(s) 124
BsaWI WCCGGW 1 cut(s) 99
BsaXI ACNNNNNCTCC 2 cut(s) 192, 222
Bse21I CCTNAGG 1 cut(s) 189
BseBI CCWGG 1 cut(s) 125
BseGI GGATG 2 cut(s) 15, 108
BseMII CTCAG 1 cut(s) 203
BseRI GAGGAG 2 cut(s) 83, 216
BseYI CCCAGC 1 cut(s) 31
Bsh1285I CGRYCG 1 cut(s) 100
BshFI GGCC 3 cut(s) 119, 174, 244
BsiEI CGRYCG 1 cut(s) 100
BsiSI CCGG 1 cut(s) 100
BsnI GGCC 3 cut(s) 119, 174, 244
Bsp143I GATC 1 cut(s) 105
BspACI CCGC 1 cut(s) 206
BspANI GGCC 3 cut(s) 119, 174, 244
BspCNI CTCAG 1 cut(s) 202
BsrBI CCGCTC 1 cut(s) 206
BssMI GATC 1 cut(s) 105
Bst2UI CCWGG 1 cut(s) 125
Bst6I CTCTTC 1 cut(s) 140
BstDEI CTNAG 2 cut(s) 5, 189
BstF5I GGATG 2 cut(s) 15, 108
BstKTI GATC 1 cut(s) 108
BstMBI GATC 1 cut(s) 105
BstMCI CGRYCG 1 cut(s) 100
BstNI CCWGG 1 cut(s) 125
BstSCI CCNGG 1 cut(s) 123
Bsu36I CCTNAGG 1 cut(s) 189
BsuRI GGCC 3 cut(s) 119, 174, 244
BtsCI GGATG 2 cut(s) 15, 108
CaiI CAGNNNCTG 1 cut(s) 31
Cfr13I GGNCC 1 cut(s) 117
CviAII CATG 1 cut(s) 58
CviJI RGCY 4 cut(s) 36, 119, 174, 244
CviKI_1 RGCY 4 cut(s) 36, 119, 174, 244
DdeI CTNAG 2 cut(s) 5, 189
DpnI GATC 1 cut(s) 107
DpnII GATC 1 cut(s) 105
Eam1104I CTCTTC 1 cut(s) 140
EarI CTCTTC 1 cut(s) 140
Eco147I AGGCCT 1 cut(s) 174
Eco81I CCTNAGG 1 cut(s) 189
EcoO109I RGGNCCY 1 cut(s) 117
EcoRII CCWGG 1 cut(s) 123
FaeI CATG 1 cut(s) 61
FaiI YATR 5 cut(s) 23, 41, 59, 226, 228
FatI CATG 1 cut(s) 57
FbaI TGATCA 1 cut(s) 105
FokI GGATG 2 cut(s) 22, 115
GsaI CCCAGC 1 cut(s) 35
HaeIII GGCC 3 cut(s) 119, 174, 244
HapII CCGG 1 cut(s) 100
Hin1II CATG 1 cut(s) 61
HpaII CCGG 1 cut(s) 100
Hpy188III TCNNGA 2 cut(s) 141, 191
HpyAV CCTTC 3 cut(s) 10, 130, 164
HpyCH4V TGCA 2 cut(s) 25, 149
HpyF3I CTNAG 2 cut(s) 5, 189
Hsp92II CATG 1 cut(s) 61
Ksp22I TGATCA 1 cut(s) 105
Kzo9I GATC 1 cut(s) 105
LmnI GCTCC 1 cut(s) 203
LpnPI CCDG 6 cut(s) 17, 30, 110, 113, 137, 176
LweI GCATC 1 cut(s) 18
MalI GATC 1 cut(s) 107
MbiI CCGCTC 1 cut(s) 206
MboI GATC 1 cut(s) 105
MboII GAAGA 2 cut(s) 85, 127
MluCI AATT 1 cut(s) 144
MnlI CCTC 3 cut(s) 61, 194, 198
MspI CCGG 1 cut(s) 100
MspR9I CCNGG 1 cut(s) 125
MvaI CCWGG 1 cut(s) 125
NdeII GATC 1 cut(s) 105
NlaIII CATG 1 cut(s) 61
PceI AGGCCT 1 cut(s) 174
Psp6I CCWGG 1 cut(s) 123
PspFI CCCAGC 1 cut(s) 31
PspGI CCWGG 1 cut(s) 123
PspPI GGNCC 1 cut(s) 117
PstNI CAGNNNCTG 1 cut(s) 31
Sau3AI GATC 1 cut(s) 105
Sau96I GGNCC 1 cut(s) 117
ScrFI CCNGG 1 cut(s) 125
SetI ASST 2 cut(s) 49, 129
SfaNI GCATC 1 cut(s) 18
SgeI CNNG 9 cut(s) 44, 57, 70, 105, 112, 136, 137, 153, 203
SmlI CTYRAG 1 cut(s) 139
SmoI CTYRAG 1 cut(s) 139
Sse9I AATT 1 cut(s) 144
SseBI AGGCCT 1 cut(s) 174
SsiI CCGC 1 cut(s) 206
StuI AGGCCT 1 cut(s) 174
StyD4I CCNGG 1 cut(s) 123
TasI AATT 1 cut(s) 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.