Rorug07G0284900

water dikinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
27639306 .. 27639800
495 bp
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UTR
Exon/CDS
Intron
Rorug07G0284900.1

Sequence Viewer

Length: 495 bp
ATGCCCGACGAGAAATTACGTGGGGTTTTTCTTCAGAAATTGAAGGGTATAGCTGTAATTGAGCATGCGCTCGACAATGTTGGTGTGGATTTGAGCGTTGATGTTGTTGCACAAGTAGTGAATAGAGGTTGTTTAGGCGGTGAAGCAATGCTTGTGTTTTTTAATTGGGCGATTAAGAAGCCAAATGTAGCTAAGCATGTTCATACATACCATATAATCCTCAAAGCATTGGGTAGAAGAAAGTTCTTTAATTATATGATGCAAGTTTTGAATGACATGAGGAGCCGTCTCGATTTGGAGACTGTGTCGATTGTGATGGATAGTTTTGTGAGGGCTGGACATGTCTCGAAAGAAATCCAAGTGTTCCGAAACTCGGCAGAGTTCGGGTTGGATTGTGATACTGAGTGTCTGAATGTGCTTCTGCAGTGTCTGTGTCGGCGGTCTCATGTAGTGGCTGCAAATTTGTTTCTTAATTCAGTGAAGGGGAAAGTGTGA

Protein Analysis

164

Amino Acids

18.44

Weight (kDa)

9.06

Isoelectric Point (pI)

36.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 138, 439
AcsI RAATTY 1 cut(s) 460
AcuI CTGAAG 1 cut(s) 17
AfiI CCNNNNNNNGG 1 cut(s) 373
AflIII ACRYGT 1 cut(s) 340
AgsI TTSAA 2 cut(s) 43, 271
AluBI AGCT 2 cut(s) 53, 191
AluI AGCT 2 cut(s) 53, 191
Alw26I GTCTC 4 cut(s) 293, 293, 349, 447
AlwNI CAGNNNCTG 1 cut(s) 430
ApeKI GCWGC 1 cut(s) 455
ApoI RAATTY 1 cut(s) 460
AspLEI GCGC 1 cut(s) 70
AsuHPI GGTGA 1 cut(s) 152
BbvI GCAGC 1 cut(s) 442
BccI CCATC 1 cut(s) 310
BceAI ACGGC 1 cut(s) 270
BcoDI GTCTC 4 cut(s) 293, 293, 349, 447
BfmI CTRYAG 1 cut(s) 422
BisI GCNGC 1 cut(s) 456
BlpI GCTNAGC 1 cut(s) 192
BlsI GCNGC 1 cut(s) 457
BmiI GGNNCC 1 cut(s) 284
BmsI GCATC 1 cut(s) 249
Bpu1102I GCTNAGC 1 cut(s) 192
BsaAI YACGTR 1 cut(s) 20
BsaI GGTCTC 1 cut(s) 447
BsaXI ACNNNNNCTCC 2 cut(s) 290, 320
Bsc4I CCNNNNNNNGG 1 cut(s) 373
Bse3DI GCAATG 1 cut(s) 153
BseLI CCNNNNNNNGG 1 cut(s) 373
BseMI GCAATG 1 cut(s) 153
BseMII CTCAG 1 cut(s) 393
BseRI GAGGAG 1 cut(s) 295
BseXI GCAGC 1 cut(s) 442
BslI CCNNNNNNNGG 1 cut(s) 373
BsmAI GTCTC 4 cut(s) 293, 293, 349, 447
BsmBI CGTCTC 1 cut(s) 293
Bso31I GGTCTC 1 cut(s) 447
Bsp1720I GCTNAGC 1 cut(s) 192
BspACI CCGC 2 cut(s) 138, 439
BspCNI CTCAG 1 cut(s) 394
BspLI GGNNCC 1 cut(s) 284
BspMAI CTGCAG 1 cut(s) 426
BspTNI GGTCTC 1 cut(s) 447
BsrDI GCAATG 1 cut(s) 153
Bst4CI ACNGT 1 cut(s) 304
BstBAI YACGTR 1 cut(s) 20
BstC8I GCNNGC 1 cut(s) 66
BstDEI CTNAG 2 cut(s) 192, 402
BstHHI GCGC 1 cut(s) 70
BstMAI GTCTC 4 cut(s) 293, 293, 349, 447
BstNSI RCATGY 3 cut(s) 68, 200, 344
BstSFI CTRYAG 1 cut(s) 422
BstV1I GCAGC 1 cut(s) 442
BtsI GCAGTG 1 cut(s) 431
BtsIMutI CAGTG 2 cut(s) 431, 483
Cac8I GCNNGC 1 cut(s) 66
CaiI CAGNNNCTG 1 cut(s) 430
CfoI GCGC 1 cut(s) 70
CviAII CATG 5 cut(s) 65, 197, 277, 341, 446
CviJI RGCY 6 cut(s) 53, 181, 191, 285, 335, 455
CviKI_1 RGCY 6 cut(s) 53, 181, 191, 285, 335, 455
DdeI CTNAG 2 cut(s) 192, 402
Eco31I GGTCTC 1 cut(s) 447
Eco57I CTGAAG 1 cut(s) 17
Esp3I CGTCTC 1 cut(s) 293
FaeI CATG 5 cut(s) 68, 200, 280, 344, 449
FalI AAGNNNNNCTT 2 cut(s) 135, 167
FatI CATG 5 cut(s) 64, 196, 276, 340, 445
Fnu4HI GCNGC 1 cut(s) 456
Fsp4HI GCNGC 1 cut(s) 456
GlaI GCGC 1 cut(s) 69
GluI GCNGC 1 cut(s) 456
HhaI GCGC 1 cut(s) 70
Hin1II CATG 5 cut(s) 68, 200, 280, 344, 449
Hin6I GCGC 1 cut(s) 68
HinP1I GCGC 1 cut(s) 68
HphI GGTGA 1 cut(s) 152
Hpy188I TCNGA 3 cut(s) 36, 368, 411
Hpy188III TCNNGA 2 cut(s) 290, 346
Hpy99I CGWCG 1 cut(s) 11
HpyAV CCTTC 2 cut(s) 37, 475
HpyCH4III ACNGT 1 cut(s) 304
HpyCH4IV ACGT 1 cut(s) 19
HpyCH4V TGCA 4 cut(s) 110, 262, 424, 458
HpyF3I CTNAG 2 cut(s) 192, 402
HpySE526I ACGT 1 cut(s) 19
Hsp92II CATG 5 cut(s) 68, 200, 280, 344, 449
HspAI GCGC 1 cut(s) 68
LmnI GCTCC 1 cut(s) 282
LpnPI CCDG 1 cut(s) 321
Lsp1109I GCAGC 1 cut(s) 442
LweI GCATC 1 cut(s) 249
MaeII ACGT 1 cut(s) 19
MboII GAAGA 2 cut(s) 23, 249
MluCI AATT 7 cut(s) 14, 38, 57, 163, 250, 460, 472
MmeI TCCRAC 1 cut(s) 369
MnlI CCTC 4 cut(s) 119, 230, 273, 324
MseI TTAA 4 cut(s) 162, 174, 249, 471
NlaIII CATG 5 cut(s) 68, 200, 280, 344, 449
NlaIV GGNNCC 1 cut(s) 284
NmeAIII GCCGAG 1 cut(s) 353
NspI RCATGY 3 cut(s) 68, 200, 344
PaeI GCATGC 1 cut(s) 68
PciI ACATGT 1 cut(s) 340
PflFI GACNNNGTC 1 cut(s) 304
PkrI GCNGC 1 cut(s) 457
Ppu21I YACGTR 1 cut(s) 20
PscI ACATGT 1 cut(s) 340
PspN4I GGNNCC 1 cut(s) 284
PstI CTGCAG 1 cut(s) 426
PstNI CAGNNNCTG 1 cut(s) 430
PsyI GACNNNGTC 1 cut(s) 304
SaqAI TTAA 4 cut(s) 162, 174, 249, 471
SatI GCNGC 1 cut(s) 456
SetI ASST 4 cut(s) 22, 55, 130, 193
SfaNI GCATC 1 cut(s) 249
SfcI CTRYAG 1 cut(s) 422
SphI GCATGC 1 cut(s) 68
Sse9I AATT 7 cut(s) 14, 38, 57, 163, 250, 460, 472
SsiI CCGC 2 cut(s) 138, 439
TaaI ACNGT 1 cut(s) 304
TaiI ACGT 1 cut(s) 22
TaqI TCGA 4 cut(s) 72, 291, 308, 347
TasI AATT 7 cut(s) 14, 38, 57, 163, 250, 460, 472
Tru1I TTAA 4 cut(s) 162, 174, 249, 471
Tru9I TTAA 4 cut(s) 162, 174, 249, 471
TscAI CASTG 2 cut(s) 431, 483
TseI GCWGC 1 cut(s) 455
TspDTI ATGAA 1 cut(s) 191
TspRI CASTG 2 cut(s) 431, 483
Tth111I GACNNNGTC 1 cut(s) 304
XapI RAATTY 1 cut(s) 460
XceI RCATGY 3 cut(s) 68, 200, 344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.