Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000008

Orthogroup ID

OG0001200

Physical Location & Seq

Genomic Coordinates Reverse (-)

10571 .. 12094

Gene Structure 1524 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RorugPtG0000500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGTAACCATTCGAGCAGATGAAATTAGTAATATTATCCGCGAACGTATTGAGCAATATAACCGAGAGGTAAAGATTTTAAATACGGGTACTGTACTTCAAGTGGGAGATGGCATTGCTCGTATTTATGGTCTTGATGAAGTAATGGCAGGTGAATTAGTAGAATTTGAAGAAGGTACGATAGGCATTGCTCTGAATTTGGAATCAAATAATGTTGGTGTTGTATTAATGGGTGACGGTTTGATGATACAAGAGGGGAGTTCTGTAAAAGCAACGGGAAGAATTGCTCAGATCCCAGTAAGTGAGGCGTTTTTAGGTCGTGTTGTAAATGCACTGGCTAAACCTATTGATGGCCGGGGCGAAATTTCAGCCTCTGAATCTCGGTTAATTGAGTCTCCTGCTCCTGGTATTATTTCGAGACGTTCCGTATACGAGCCCCTTCAAACAGGACTTATTGCTATTGATTCGATGATCCCTATAGGGCGCGGTCAGCGGGAATTGATTATTGGGGACAGACAGACCGGTAAAACAGCAGTAGCCACGGATACGATTCTCAATCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCGATTGGTCAAAAAGCATCTTCTGTGGCTCAGGTGGTGACTGCTTTGCAGGAAAGGGGGGCAATGGAATACACTATTGTGGTAGCTGAAGCGGCGGATTCCCCGGCTACATTACAGTATCTTGCTCCTTATACAGGAGCAGCTCTGGCTGAATATTTCATGTACCGTGAGCAACACACTTTAATCATTTATGACGATCTCTCCAAACAAGCGCAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCGCCGGGCCGCGAAGCGTATCCGGGAGATGTTTTTTATCTACATTCACGCCTTTTGGAAAGAGCCGCGAAATTAGGTTCTCTTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCGGGGGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGACAAATATTCTTATCTGCTGATTTATTCAATGCTGGAATCAGACCAGCTATTAATGTGGGTATTTCTGTTTCCAGAGTGGGATCGGCAGCTCAAATTAAAGCCATGAAACAAGTAGCTGGAAAATTAAAATTGGAATTGGCGCAATTTGCAGAATTAGAAGCCTTTGCACAATTTGCTTCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCTCAATCAGCCCCCCTTGCGGTGGAAGAACAGATATTGACTATTTATACCGGAACGAACGGTTATCTTGATTCATTAGAAATTGGACAGGTAAGGAAATTTCTTGTTGAGTTACGTACTTATTTAAAAACGAATAAACCGCAGTTCCAAGAAATCATATCTTCTACCAAGACATTTACCGAGGAAGCGGAAACCCTTTTGAAAGAAGCTATTCAGGACCAGATGGAACGTTTTCTACTTCAGGAACAAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005975 GO:0005976 GO:0005982 GO:0005983 GO:0006073 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009631 GO:0009941 GO:0009987 GO:0016052 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016781 GO:0031967 GO:0031975 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050521 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPDK_N

Protein Analysis

507

Amino Acids

55.35

Weight (kDa)

5.04

Isoelectric Point (pI)

35.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATP-synt_ab_N	PF02874	29 - 93	7.4e-18	ATP synthase alpha/beta family, beta-barrel domain
ATP-synt_ab	PF00006	150 - 365	3.8e-82	ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_ab_C	PF00306	372 - 496	2.6e-44	ATP synthase alpha/beta chain, C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001200)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0129611 RchiOBHm_Chr3g0476471 RchiOBHm_Chr6g0270131 RchiOBHm_Chr7g0233921 RchiOBHm_Chr7g0233931 RchiOBHm_Chr7g0234461 RchiOBHm_Chr7g0234611 RchiOBHm_Chr7g0234621
rosa_laevigata	RLG00000001213 RLG00000001221 RLG00000001227 RLG00000021012 RLG00000023959
rosa_multiflora	Rmu_co8468527.1_g000001 Rmu_sc0000974.1_g000014 Rmu_sc0001528.1_g000001 Rmu_sc0003291.1_g000028 Rmu_sc0003321.1_g000002 Rmu_sc0004303.1_g000006 Rmu_sc0004864.1_g000021 Rmu_sc0008667.1_g000013 Rmu_sc0011456.1_g000004 Rmu_sc0023836.1_g000001
rosa_roxburghii	Rroxscaffold_1G00049680 Rroxscaffold_3G00226730 Rroxscaffold_3G00226790 Rroxscaffold_3G00226800 Rroxscaffold_4G00302360
rosa_rugosa	Rorug01G0119600 Rorug01G0119700 Rorug01G0119800 Rorug02G0400100 Rorug07G0163100 Rorug07G0163100 Rorug07G0163200.1 Rorug07G0284900 Rorug07G0285500 RorugPtG0000400.1 RorugPtG0000500 RorugPtG0000600
rosa_samantha	Rh1DG123700 Rh2AG327500 Rh2DG356100 Rh2DG519500 Rh3DG370800 Rh5AG164500 Rh5CG516500 Rh7AG439900 Rh7BG412700 Rh7BG412900 Rh7BG413000 Rh7CG461700
rosa_wichuraiana	Rw2G026740 Rw7G036220 Rw7G036280 Rw7G036420 Rw7G036560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	140
Acc36I	ACCTGC	1 cut(s)	140
AccI	GTMKAC	1 cut(s)	429
AccII	CGCG	4 cut(s)	42, 486, 852, 908
AclI	AACGTT	1 cut(s)	1498
AclWI	GGATC	3 cut(s)	286, 466, 1111
AcoI	YGGCCR	1 cut(s)	352
AcsI	RAATTY	4 cut(s)	164, 196, 363, 1367
AcuI	CTGAAG	2 cut(s)	699, 1493
AfaI	GTAC	5 cut(s)	91, 96, 178, 755, 1387
AfiI	CCNNNNNNNGG	7 cut(s)	350, 404, 725, 972, 973, 1288, 1291
AgeI	ACCGGT	1 cut(s)	521
AgsI	TTSAA	5 cut(s)	101, 170, 443, 1051, 1471
AjnI	CCWGG	1 cut(s)	403
AjuI	GAANNNNNNNTTGG	4 cut(s)	489, 521, 810, 842
AleI	CACNNNNGTG	1 cut(s)	668
AluBI	AGCT	7 cut(s)	677, 734, 1070, 1112, 1139, 1217, 1478
AluI	AGCT	7 cut(s)	677, 734, 1070, 1112, 1139, 1217, 1478
Alw26I	GTCTC	4 cut(s)	399, 412, 828, 956
AlwI	GGATC	3 cut(s)	286, 466, 1111
AlwNI	CAGNNNCTG	1 cut(s)	374
AoxI	GGCC	2 cut(s)	352, 847
ApeKI	GCWGC	2 cut(s)	731, 1109
ApoI	RAATTY	4 cut(s)	164, 196, 363, 1367
AseI	ATTAAT	2 cut(s)	227, 1074
AsiGI	ACCGGT	1 cut(s)	521
Asp700I	GAANNNNTTC	2 cut(s)	1479, 1500
AspLEI	GCGC	3 cut(s)	486, 805, 1165
AspS9I	GGNCC	2 cut(s)	847, 1486
AsuC2I	CCSGG	4 cut(s)	356, 695, 846, 864
AsuHPI	GGTGA	4 cut(s)	164, 245, 640, 941
AvaII	GGWCC	1 cut(s)	1486
BanII	GRGCYC	1 cut(s)	438
BbsI	GAAGAC	1 cut(s)	844
BbvI	GCAGC	2 cut(s)	743, 1121
BccI	CCATC	4 cut(s)	104, 344, 1013, 1486
BcgI	CGANNNNNNTGC	2 cut(s)	794, 828
BciT130I	CCWGG	1 cut(s)	405
BciVI	GTATCC	2 cut(s)	538, 870
BcnI	CCSGG	4 cut(s)	356, 695, 846, 864
BcoDI	GTCTC	4 cut(s)	399, 412, 828, 956
BfmI	CTRYAG	1 cut(s)	477
BfuAI	ACCTGC	1 cut(s)	140
BfuI	GTATCC	2 cut(s)	538, 870
BisI	GCNGC	5 cut(s)	684, 732, 850, 906, 1110
BlsI	GCNGC	5 cut(s)	685, 733, 851, 907, 1111
Bme1390I	CCNGG	5 cut(s)	356, 405, 695, 846, 864
Bme18I	GGWCC	1 cut(s)	1486
BmgT120I	GGNCC	2 cut(s)	847, 1486
BmrFI	CCNGG	5 cut(s)	356, 405, 695, 846, 864
BmrI	ACTGGG	1 cut(s)	290
BmsI	GCATC	1 cut(s)	617
BmuI	ACTGGG	1 cut(s)	290
BpiI	GAAGAC	1 cut(s)	844
Bpu10I	CCTNAGC	1 cut(s)	621
BpuMI	CCSGG	4 cut(s)	356, 695, 846, 864
BsaAI	YACGTR	2 cut(s)	1253, 1385
BsaI	GGTCTC	1 cut(s)	956
BsaJI	CCNNGG	4 cut(s)	355, 540, 693, 1449
BsaWI	WCCGGW	2 cut(s)	521, 1319
BsaXI	ACNNNNNCTCC	2 cut(s)	776, 806
Bsc4I	CCNNNNNNNGG	7 cut(s)	350, 404, 725, 972, 973, 1288, 1291
Bse118I	RCCGGY	1 cut(s)	521
Bse1I	ACTGG	2 cut(s)	296, 339
Bse3DI	GCAATG	3 cut(s)	114, 186, 660
BseBI	CCWGG	1 cut(s)	405
BseDI	CCNNGG	4 cut(s)	355, 540, 693, 1449
BseGI	GGATG	1 cut(s)	982
BseLI	CCNNNNNNNGG	7 cut(s)	350, 404, 725, 972, 973, 1288, 1291
BseMI	GCAATG	3 cut(s)	114, 186, 660
BseMII	CTCAG	3 cut(s)	302, 635, 1235
BseNI	ACTGG	2 cut(s)	296, 339
BseXI	GCAGC	2 cut(s)	743, 1121
Bsh1236I	CGCG	4 cut(s)	42, 486, 852, 908
BshFI	GGCC	2 cut(s)	354, 849
BshTI	ACCGGT	1 cut(s)	521
BsiSI	CCGG	6 cut(s)	355, 522, 695, 845, 863, 1320
BslFI	GGGAC	1 cut(s)	524
BslI	CCNNNNNNNGG	7 cut(s)	350, 404, 725, 972, 973, 1288, 1291
BsmAI	GTCTC	4 cut(s)	399, 412, 828, 956
BsmBI	CGTCTC	1 cut(s)	412
BsmFI	GGGAC	1 cut(s)	524
BsnI	GGCC	2 cut(s)	354, 849
Bso31I	GGTCTC	1 cut(s)	956
Bsp1286I	GDGCHC	1 cut(s)	438
Bsp143I	GATC	5 cut(s)	291, 471, 787, 1103, 1204
BspANI	GGCC	2 cut(s)	354, 849
BspCNI	CTCAG	3 cut(s)	301, 634, 1234
BspFNI	CGCG	4 cut(s)	42, 486, 852, 908
BspMI	ACCTGC	1 cut(s)	140
BspPI	GGATC	3 cut(s)	286, 466, 1111
BspTNI	GGTCTC	1 cut(s)	956
BsrDI	GCAATG	3 cut(s)	114, 186, 660
BsrFI	RCCGGY	1 cut(s)	521
BsrI	ACTGG	2 cut(s)	296, 339
BssAI	RCCGGY	1 cut(s)	521
BssECI	CCNNGG	4 cut(s)	355, 540, 693, 1449
BssMI	GATC	5 cut(s)	291, 471, 787, 1103, 1204
BssNAI	GTATAC	1 cut(s)	430
Bst1107I	GTATAC	1 cut(s)	430
Bst2UI	CCWGG	1 cut(s)	405
Bst4CI	ACNGT	5 cut(s)	94, 239, 708, 758, 1331
Bst6I	CTCTTC	1 cut(s)	831
BstAPI	GCANNNNNTGC	1 cut(s)	1196
BstBAI	YACGTR	2 cut(s)	1253, 1385
BstC8I	GCNNGC	1 cut(s)	807
BstDEI	CTNAG	3 cut(s)	288, 621, 1221
BstDSI	CCRYGG	1 cut(s)	540
BstEII	GGTNACC	1 cut(s)	4
BstENI	CCTNNNNNAGG	1 cut(s)	723
BstF5I	GGATG	1 cut(s)	982
BstFNI	CGCG	4 cut(s)	42, 486, 852, 908
BstHHI	GCGC	3 cut(s)	486, 805, 1165
BstKTI	GATC	5 cut(s)	294, 474, 790, 1106, 1207
BstMAI	GTCTC	4 cut(s)	399, 412, 828, 956
BstMBI	GATC	5 cut(s)	291, 471, 787, 1103, 1204
BstMWI	GCNNNNNNNGC	6 cut(s)	490, 683, 737, 1169, 1196, 1286
BstNI	CCWGG	1 cut(s)	405
BstPI	GGTNACC	1 cut(s)	4
BstSCI	CCNGG	5 cut(s)	354, 403, 693, 844, 862
BstSFI	CTRYAG	1 cut(s)	477
BstSNI	TACGTA	1 cut(s)	1385
BstUI	CGCG	4 cut(s)	42, 486, 852, 908
BstV1I	GCAGC	2 cut(s)	743, 1121
BstV2I	GAAGAC	1 cut(s)	844
BstX2I	RGATCY	1 cut(s)	291
BstYI	RGATCY	1 cut(s)	291
BstZ17I	GTATAC	1 cut(s)	430
BsuI	GTATCC	2 cut(s)	538, 870
BsuRI	GGCC	2 cut(s)	354, 849
BtgI	CCRYGG	1 cut(s)	540
BtsCI	GGATG	1 cut(s)	982
BtsIMutI	CAGTG	1 cut(s)	332
BveI	ACCTGC	1 cut(s)	140
Cac8I	GCNNGC	1 cut(s)	807
CaiI	CAGNNNCTG	1 cut(s)	374
CfoI	GCGC	3 cut(s)	486, 805, 1165
Cfr10I	RCCGGY	1 cut(s)	521
Cfr13I	GGNCC	2 cut(s)	847, 1486
Csp6I	GTAC	5 cut(s)	90, 95, 177, 754, 1386
CspAI	ACCGGT	1 cut(s)	521
CviAII	CATG	2 cut(s)	751, 1126
CviQI	GTAC	5 cut(s)	90, 95, 177, 754, 1386
DdeI	CTNAG	3 cut(s)	288, 621, 1221
DpnI	GATC	5 cut(s)	293, 473, 789, 1105, 1206
DpnII	GATC	5 cut(s)	291, 471, 787, 1103, 1204
DraI	TTTAAA	2 cut(s)	81, 1395
EaeI	YGGCCR	1 cut(s)	352
Eam1104I	CTCTTC	1 cut(s)	831
EarI	CTCTTC	1 cut(s)	831
EciI	GGCGGA	1 cut(s)	701
Eco105I	TACGTA	1 cut(s)	1385
Eco24I	GRGCYC	1 cut(s)	438
Eco31I	GGTCTC	1 cut(s)	956
Eco47I	GGWCC	1 cut(s)	1486
Eco57I	CTGAAG	2 cut(s)	699, 1493
Eco91I	GGTNACC	1 cut(s)	4
EcoNI	CCTNNNNNAGG	1 cut(s)	723
EcoO65I	GGTNACC	1 cut(s)	4
EcoRII	CCWGG	1 cut(s)	403
EcoT38I	GRGCYC	1 cut(s)	438
Esp3I	CGTCTC	1 cut(s)	412
FaeI	CATG	2 cut(s)	754, 1129
FaqI	GGGAC	1 cut(s)	524
FatI	CATG	2 cut(s)	750, 1125
FauI	CCCGC	1 cut(s)	486
FblI	GTMKAC	1 cut(s)	429
Fnu4HI	GCNGC	5 cut(s)	684, 732, 850, 906, 1110
FokI	GGATG	1 cut(s)	989
FriOI	GRGCYC	1 cut(s)	438
Fsp4HI	GCNGC	5 cut(s)	684, 732, 850, 906, 1110
GlaI	GCGC	3 cut(s)	485, 804, 1164
GluI	GCNGC	5 cut(s)	684, 732, 850, 906, 1110
HaeIII	GGCC	2 cut(s)	354, 849
HapII	CCGG	6 cut(s)	355, 522, 695, 845, 863, 1320
HhaI	GCGC	3 cut(s)	486, 805, 1165
Hin1II	CATG	2 cut(s)	754, 1129
Hin6I	GCGC	3 cut(s)	484, 803, 1163
HinP1I	GCGC	3 cut(s)	484, 803, 1163
HincII	GTYRAC	1 cut(s)	1244
HindII	GTYRAC	1 cut(s)	1244
HinfI	GANTC	9 cut(s)	203, 377, 392, 464, 550, 689, 1059, 1225, 1340
HpaII	CCGG	6 cut(s)	355, 522, 695, 845, 863, 1320
HphI	GGTGA	4 cut(s)	164, 245, 640, 941
Hpy166II	GTNNAC	2 cut(s)	430, 1244
Hpy188I	TCNGA	6 cut(s)	195, 291, 376, 1064, 1204, 1224
Hpy188III	TCNNGA	7 cut(s)	134, 417, 1095, 1208, 1337, 1484, 1511
Hpy8I	GTNNAC	2 cut(s)	430, 1244
HpyAV	CCTTC	3 cut(s)	167, 449, 926
HpyCH4III	ACNGT	5 cut(s)	94, 239, 708, 758, 1331
HpyCH4IV	ACGT	5 cut(s)	46, 421, 1252, 1384, 1498
HpyCH4V	TGCA	4 cut(s)	332, 640, 1172, 1190
HpyF10VI	GCNNNNNNNGC	6 cut(s)	490, 683, 737, 1169, 1196, 1286
HpyF3I	CTNAG	3 cut(s)	288, 621, 1221
HpySE526I	ACGT	5 cut(s)	46, 421, 1252, 1384, 1498
Hsp92II	CATG	2 cut(s)	754, 1129
HspAI	GCGC	3 cut(s)	484, 803, 1163
Kzo9I	GATC	5 cut(s)	291, 471, 787, 1103, 1204
LmnI	GCTCC	3 cut(s)	406, 721, 728
Lsp1109I	GCAGC	2 cut(s)	743, 1121
LweI	GCATC	1 cut(s)	617
MaeII	ACGT	5 cut(s)	46, 421, 1252, 1384, 1498
MaeIII	GTNAC	4 cut(s)	4, 233, 628, 1380
MalI	GATC	5 cut(s)	293, 473, 789, 1105, 1206
MboI	GATC	5 cut(s)	291, 471, 787, 1103, 1204
MboII	GAAGA	7 cut(s)	182, 291, 603, 818, 849, 1307, 1422
MfeI	CAATTG	1 cut(s)	1229
MflI	RGATCY	1 cut(s)	291
MhlI	GDGCHC	1 cut(s)	438
MlyI	GAGTC	1 cut(s)	401
MnlI	CCTC	6 cut(s)	61, 247, 298, 382, 1232, 1444
MroXI	GAANNNNTTC	2 cut(s)	1479, 1500
MseI	TTAA	8 cut(s)	80, 227, 386, 773, 1074, 1119, 1148, 1394
MslI	CAYNNNNRTG	1 cut(s)	668
MspA1I	CMGCKG	1 cut(s)	493
MspI	CCGG	6 cut(s)	355, 522, 695, 845, 863, 1320
MspR9I	CCNGG	5 cut(s)	356, 405, 695, 846, 864
MunI	CAATTG	1 cut(s)	1229
MvaI	CCWGG	1 cut(s)	405
MvnI	CGCG	4 cut(s)	42, 486, 852, 908
MwoI	GCNNNNNNNGC	6 cut(s)	490, 683, 737, 1169, 1196, 1286
NciI	CCSGG	4 cut(s)	356, 695, 846, 864
NdeII	GATC	5 cut(s)	291, 471, 787, 1103, 1204
NlaIII	CATG	2 cut(s)	754, 1129
NmuCI	GTSAC	2 cut(s)	233, 628
OliI	CACNNNNGTG	1 cut(s)	668
PaqCI	CACCTGC	1 cut(s)	140
PdmI	GAANNNNTTC	2 cut(s)	1479, 1500
PfeI	GAWTC	8 cut(s)	203, 377, 464, 550, 689, 1059, 1225, 1340
PfoI	TCCNGGA	1 cut(s)	862
PinAI	ACCGGT	1 cut(s)	521
PkrI	GCNGC	5 cut(s)	685, 733, 851, 907, 1111
PleI	GAGTC	1 cut(s)	400
PpsI	GAGTC	1 cut(s)	400
Ppu21I	YACGTR	2 cut(s)	1253, 1385
PshBI	ATTAAT	2 cut(s)	227, 1074
Psp1406I	AACGTT	1 cut(s)	1498
Psp6I	CCWGG	1 cut(s)	403
PspEI	GGTNACC	1 cut(s)	4
PspGI	CCWGG	1 cut(s)	403
PspPI	GGNCC	2 cut(s)	847, 1486
PsrI	GAACNNNNNNTAC	2 cut(s)	1488, 1520
PstNI	CAGNNNCTG	1 cut(s)	374
PsuI	RGATCY	1 cut(s)	291
RsaI	GTAC	5 cut(s)	91, 96, 178, 755, 1387
RsaNI	GTAC	5 cut(s)	90, 95, 177, 754, 1386
RseI	CAYNNNNRTG	1 cut(s)	668
SaqAI	TTAA	8 cut(s)	80, 227, 386, 773, 1074, 1119, 1148, 1394
SatI	GCNGC	5 cut(s)	684, 732, 850, 906, 1110
Sau3AI	GATC	5 cut(s)	291, 471, 787, 1103, 1204
Sau96I	GGNCC	2 cut(s)	847, 1486
SchI	GAGTC	1 cut(s)	401
ScrFI	CCNGG	5 cut(s)	356, 405, 695, 846, 864
SduI	GDGCHC	1 cut(s)	438
SfaNI	GCATC	1 cut(s)	617
SfcI	CTRYAG	1 cut(s)	477
SinI	GGWCC	1 cut(s)	1486
SmiMI	CAYNNNNRTG	1 cut(s)	668
SnaBI	TACGTA	1 cut(s)	1385
SspI	AATATT	3 cut(s)	34, 746, 1029
StyD4I	CCNGG	5 cut(s)	354, 403, 693, 844, 862
TaaI	ACNGT	5 cut(s)	94, 239, 708, 758, 1331
TaiI	ACGT	5 cut(s)	49, 424, 1255, 1387, 1501
TaqI	TCGA	4 cut(s)	13, 416, 467, 1209
TatI	WGTACW	1 cut(s)	94
TauI	GCSGC	3 cut(s)	686, 852, 908
TfiI	GAWTC	8 cut(s)	203, 377, 464, 550, 689, 1059, 1225, 1340
Tru1I	TTAA	8 cut(s)	80, 227, 386, 773, 1074, 1119, 1148, 1394
Tru9I	TTAA	8 cut(s)	80, 227, 386, 773, 1074, 1119, 1148, 1394
TscAI	CASTG	1 cut(s)	339
TseFI	GTSAC	2 cut(s)	233, 628
TseI	GCWGC	2 cut(s)	731, 1109
Tsp45I	GTSAC	2 cut(s)	233, 628
TspDTI	ATGAA	5 cut(s)	36, 153, 739, 1142, 1332
TspGWI	ACGGA	2 cut(s)	415, 557
TspRI	CASTG	1 cut(s)	339
VpaK11BI	GGWCC	1 cut(s)	1486
VspI	ATTAAT	2 cut(s)	227, 1074
XagI	CCTNNNNNAGG	1 cut(s)	723
XapI	RAATTY	4 cut(s)	164, 196, 363, 1367
XmiI	GTMKAC	1 cut(s)	429
XmnI	GAANNNNTTC	2 cut(s)	1479, 1500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.