Rmu_sc0023836.1_g000001

Alpha-glucan water dikinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0023836.1
Physical Location & Seq
Forward (+)
1 .. 568
568 bp
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UTR
Exon/CDS
Intron
Rmu_sc0023836.1_g000001.1.cds

Sequence Viewer

Length: 225 bp
gtgttaggttaccctagcaaaccgattggcctctttatcagacagtccataatcttccgatccgattccaatggtgaagatcttgaaggttatgctggtgcaggcctttatgacagtgtgcctatggatgcggaagaggaagtcgtgcttgactactcatctgacccactcgttactgatgggaacttccaaaagataattctgtccagcattgctcgtgcatga

Protein Analysis

74

Amino Acids

8.01

Weight (kDa)

4.1

Isoelectric Point (pI)

48.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 131
AclWI GGATC 1 cut(s) 54
AgsI TTSAA 1 cut(s) 86
AjuI GAANNNNNNNTTGG 2 cut(s) 183, 215
AlwI GGATC 1 cut(s) 54
AoxI GGCC 2 cut(s) 28, 103
AsuHPI GGTGA 1 cut(s) 86
BauI CACGAG 1 cut(s) 216
BccI CCATC 1 cut(s) 173
BfaI CTAG 1 cut(s) 15
BglII AGATCT 1 cut(s) 79
BmsI GCATC 1 cut(s) 118
Bse3DI GCAATG 1 cut(s) 210
BseGI GGATG 1 cut(s) 133
BseMI GCAATG 1 cut(s) 210
BsgI GTGCAG 1 cut(s) 120
BshFI GGCC 2 cut(s) 30, 105
BsnI GGCC 2 cut(s) 30, 105
Bsp143I GATC 2 cut(s) 59, 79
BspACI CCGC 1 cut(s) 131
BspANI GGCC 2 cut(s) 30, 105
BspPI GGATC 1 cut(s) 54
BsrDI GCAATG 1 cut(s) 210
BssMI GATC 2 cut(s) 59, 79
BssSI CACGAG 1 cut(s) 216
Bst2BI CACGAG 1 cut(s) 216
Bst4CI ACNGT 2 cut(s) 45, 116
Bst6I CTCTTC 1 cut(s) 129
BstC8I GCNNGC 1 cut(s) 103
BstEII GGTNACC 1 cut(s) 8
BstF5I GGATG 1 cut(s) 133
BstKTI GATC 2 cut(s) 62, 82
BstMBI GATC 2 cut(s) 59, 79
BstPI GGTNACC 1 cut(s) 8
BstX2I RGATCY 1 cut(s) 79
BstYI RGATCY 1 cut(s) 79
BsuRI GGCC 2 cut(s) 30, 105
BtsCI GGATG 1 cut(s) 133
BtsIMutI CAGTG 1 cut(s) 121
Cac8I GCNNGC 1 cut(s) 103
CviAII CATG 1 cut(s) 222
CviJI RGCY 2 cut(s) 30, 105
CviKI_1 RGCY 2 cut(s) 30, 105
DpnI GATC 2 cut(s) 61, 81
DpnII GATC 2 cut(s) 59, 79
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
Eco147I AGGCCT 1 cut(s) 105
Eco91I GGTNACC 1 cut(s) 8
EcoO65I GGTNACC 1 cut(s) 8
FaeI CATG 1 cut(s) 225
FaiI YATR 5 cut(s) 50, 93, 111, 125, 223
FalI AAGNNNNNCTT 2 cut(s) 132, 164
FatI CATG 1 cut(s) 221
FokI GGATG 1 cut(s) 140
FspBI CTAG 1 cut(s) 15
HaeIII GGCC 2 cut(s) 30, 105
Hin1II CATG 1 cut(s) 225
HinfI GANTC 1 cut(s) 65
HphI GGTGA 1 cut(s) 86
Hpy188I TCNGA 4 cut(s) 41, 59, 64, 163
Hpy188III TCNNGA 1 cut(s) 83
HpyAV CCTTC 1 cut(s) 80
HpyCH4III ACNGT 2 cut(s) 45, 116
HpyCH4V TGCA 2 cut(s) 101, 221
Hsp92II CATG 1 cut(s) 225
Kzo9I GATC 2 cut(s) 59, 79
LpnPI CCDG 3 cut(s) 81, 87, 220
LweI GCATC 1 cut(s) 118
MaeI CTAG 1 cut(s) 15
MaeIII GTNAC 2 cut(s) 8, 172
MalI GATC 2 cut(s) 61, 81
MboI GATC 2 cut(s) 59, 79
MboII GAAGA 3 cut(s) 46, 89, 146
MflI RGATCY 1 cut(s) 79
MluCI AATT 1 cut(s) 198
MnlI CCTC 2 cut(s) 41, 130
NdeII GATC 2 cut(s) 59, 79
NlaIII CATG 1 cut(s) 225
PceI AGGCCT 1 cut(s) 105
PfeI GAWTC 1 cut(s) 65
PspEI GGTNACC 1 cut(s) 8
PsuI RGATCY 1 cut(s) 79
Sau3AI GATC 2 cut(s) 59, 79
SetI ASST 2 cut(s) 10, 91
SfaNI GCATC 1 cut(s) 118
SgeI CNNG 8 cut(s) 27, 95, 108, 114, 157, 161, 182, 219
Sse9I AATT 1 cut(s) 198
SseBI AGGCCT 1 cut(s) 105
SsiI CCGC 1 cut(s) 131
SspMI CTAG 1 cut(s) 15
StuI AGGCCT 1 cut(s) 105
TaaI ACNGT 2 cut(s) 45, 116
TasI AATT 1 cut(s) 198
TfiI GAWTC 1 cut(s) 65
TscAI CASTG 1 cut(s) 121
TspRI CASTG 1 cut(s) 121
XspI CTAG 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.