RchiOBHm_Chr7g0242771
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
69094253 .. 69100053
5801 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21757

Sequence Viewer

Length: 1461 bp
ATGGAGAAGTATGAGATTGTGAAAGATATTGGGTCTGGGGCTTCTGGGGTAGCAAGGTTGGTAAGAGATAAATGTACCGGAGAGCACTTTGCTGTTAAGTTCATCGAGAGAGGCAACAAGATCAATGAAAATGTACAAGGGGAAATCATGAACCACAGATCCTTGAAGCATCCCAATGTTGTTCAATTCAAAGAGGTCCTGCTGACACCAACTCATCTAGCCATTGTGATGGAGTATGCTGCTGGAGGAGAACTCTATGAGAGAATATGCAAAGCCGGTAGATTTAGTGAGAATGAGGCAAGGTTTTTCTTCCAGCAATTGATATCAGGAGTTGGTTACTGCCATAAAATGAAAGTATGTCATAGAGATCTTAAGCTTGAAAATGCACTCTTAGATGACAGCACAGCACCGCGGGTGAAAATATGTGATTTTGGATCATCAAAGTCACTACTACTACATTCTCGGCAAAAATCTACTGCGGGAACTCCGGCTTATATTGCACCTGAGGTCCTATCTGAAAAACAATATGATGGAGAGATTGCAGATGTTTGGTCTTGTGGGGTCTCCCTATATGTCATGATTGTTGGAGCATATCCCTTTGAAGATCCTAAGGACCCTACGAACCTTAGAAAAACAATTCTGCGGACCCTTACTGTATGCTACTCAATCCCTGGTAATGTACGAGTTTCTGTGGAATGTAGAGACTTGCTCGCTAAGATATTTGTGGCAAACCCAGAAAAGAGAATTACAATTTCAGAAATTAAGAACCACTGTTGGTTCTTAAAGGATTTACCTATGGAAATGTGGGAAGGAGGAAGTTGGGAAAGCAATGATGTAAACCATCCATCCCAAAGCATAGAAGAAGTCCTGTCCATAATACAAGAGGCAAGAAAACCTTTAAAGGCCCCAACTGTCAGTAGGCATCTCGTAGGAAGCAGCATGGCTATTGATGATGCTGATGTTGGAGGTCGTTGGTCCTCAGGTTGGGATGCCCGAAGGAGGTTTGATCTATGGGGCGGCATGGTCGTCGGCGTCCAGAGATATTTGGATGCAGATGATGATGGCGGAGGTTGGTCGGATCCGGGCAGACTGGGTCGAGTGATTTGGTCCTCTGCTATGGACGACGACATTGATGCTGACTGCTGGGATACGTTTTGGCTTGCGTCGACTGGCTTTGGTGACTGGAGTGGCGGCTCTAAGCCTGGCGGTAGGTACGGCGATGGACGCGGTGGTGACCACGATGGCGGTGGCAGCGACGACCAAAGTGGCAGCAACCTCCCCATGGATTGCGCCAGGGTTTCACAAGGCTGGGCCTCTTGGGCTACTAAGTGGTGGTGGGCTTTCATGTGGGCTTGGTTATTTTGGGCCTACATGATTGTTCGGGTTTTATTTGTTATTTTTGTTTTTGGTTTCCATCCTTTTATACAAAAGGATGATGAACCAATTTTTTTCTTTATTTGA

Protein Analysis

486

Amino Acids

54.63

Weight (kDa)

5.62

Isoelectric Point (pI)

36.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 4 - 260 2e-68 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 6 - 256 2.1e-30 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000609)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1166
AccII CGCG 2 cut(s) 412, 1227
AclWI GGATC 5 cut(s) 153, 442, 599, 1073, 1086
AcyI GRCGYC 1 cut(s) 1032
AfaI GTAC 4 cut(s) 76, 135, 681, 1214
AfiI CCNNNNNNNGG 3 cut(s) 984, 999, 1282
AflII CTTAAG 1 cut(s) 371
AgsI TTSAA 5 cut(s) 166, 185, 190, 380, 602
AjnI CCWGG 3 cut(s) 670, 1201, 1292
AloI GAACNNNNNNTCC 2 cut(s) 143, 175
AluBI AGCT 1 cut(s) 376
AluI AGCT 1 cut(s) 376
Alw21I GWGCWC 1 cut(s) 87
Alw26I GTCTC 2 cut(s) 568, 696
AlwI GGATC 5 cut(s) 153, 442, 599, 1073, 1086
AoxI GGCC 3 cut(s) 903, 1311, 1365
ApeKI GCWGC 4 cut(s) 239, 936, 1251, 1269
AspLEI GCGC 1 cut(s) 1292
AspS9I GGNCC 9 cut(s) 196, 508, 613, 645, 904, 975, 1107, 1311, 1365
AsuC2I CCSGG 1 cut(s) 1083
AsuHPI GGTGA 3 cut(s) 427, 1190, 1244
AvaII GGWCC 6 cut(s) 196, 508, 613, 645, 975, 1107
AxyI CCTNAGG 3 cut(s) 504, 609, 979
BamHI GGATCC 1 cut(s) 1078
Bbv12I GWGCWC 1 cut(s) 87
BbvI GCAGC 4 cut(s) 226, 948, 1263, 1281
BccI CCATC 8 cut(s) 223, 524, 849, 853, 1055, 1214, 1235, 1422
BceAI ACGGC 1 cut(s) 1231
BcgI CGANNNNNNTGC 4 cut(s) 1009, 1043, 1115, 1149
BciT130I CCWGG 3 cut(s) 672, 1203, 1294
BciVI GTATCC 1 cut(s) 1141
BcnI CCSGG 1 cut(s) 1083
BcoDI GTCTC 2 cut(s) 568, 696
BfaI CTAG 1 cut(s) 218
BfrI CTTAAG 1 cut(s) 371
BfuI GTATCC 1 cut(s) 1141
BglI GCCNNNNNGGC 1 cut(s) 1319
BglII AGATCT 1 cut(s) 367
BisI GCNGC 6 cut(s) 240, 937, 1018, 1192, 1252, 1270
BlsI GCNGC 6 cut(s) 241, 938, 1019, 1193, 1253, 1271
Bme1390I CCNGG 4 cut(s) 672, 1083, 1203, 1294
Bme18I GGWCC 6 cut(s) 196, 508, 613, 645, 975, 1107
BmgT120I GGNCC 9 cut(s) 196, 508, 613, 645, 904, 975, 1107, 1311, 1365
BmiI GGNNCC 4 cut(s) 615, 647, 906, 1080
BmrFI CCNGG 4 cut(s) 672, 1083, 1203, 1294
BmrI ACTGGG 1 cut(s) 1100
BmsI GCATC 6 cut(s) 178, 931, 943, 979, 1039, 1123
BmuI ACTGGG 1 cut(s) 1100
BplI GAGNNNNNCTC 4 cut(s) 237, 269, 693, 725
BpmI CTGGAG 2 cut(s) 264, 1204
BpuMI CCSGG 1 cut(s) 1083
BsaHI GRCGYC 1 cut(s) 1032
BsaI GGTCTC 1 cut(s) 568
BsaJI CCNNGG 4 cut(s) 410, 670, 1281, 1293
BsaWI WCCGGW 1 cut(s) 77
Bsc4I CCNNNNNNNGG 3 cut(s) 984, 999, 1282
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 3 cut(s) 1095, 1174, 1187
Bse21I CCTNAGG 3 cut(s) 504, 609, 979
Bse3DI GCAATG 1 cut(s) 835
BseBI CCWGG 3 cut(s) 672, 1203, 1294
BseDI CCNNGG 4 cut(s) 410, 670, 1281, 1293
BseGI GGATG 7 cut(s) 169, 841, 845, 994, 1054, 1414, 1438
BseLI CCNNNNNNNGG 3 cut(s) 984, 999, 1282
BseMI GCAATG 1 cut(s) 835
BseMII CTCAG 2 cut(s) 495, 993
BseNI ACTGG 3 cut(s) 1095, 1174, 1187
BseRI GAGGAG 1 cut(s) 261
BseXI GCAGC 4 cut(s) 226, 948, 1263, 1281
BseYI CCCAGC 2 cut(s) 1143, 1308
Bsh1236I CGCG 2 cut(s) 412, 1227
BshFI GGCC 3 cut(s) 905, 1313, 1367
BsiHKAI GWGCWC 1 cut(s) 87
BsiSI CCGG 4 cut(s) 78, 276, 488, 1082
BslI CCNNNNNNNGG 3 cut(s) 984, 999, 1282
BsmAI GTCTC 2 cut(s) 568, 696
BsnI GGCC 3 cut(s) 905, 1313, 1367
Bso31I GGTCTC 1 cut(s) 568
Bsp1286I GDGCHC 1 cut(s) 87
Bsp1407I TGTACA 1 cut(s) 133
Bsp143I GATC 7 cut(s) 120, 158, 367, 434, 604, 1006, 1078
Bsp19I CCATGG 1 cut(s) 1281
BspANI GGCC 3 cut(s) 905, 1313, 1367
BspCNI CTCAG 2 cut(s) 496, 992
BspFNI CGCG 2 cut(s) 412, 1227
BspHI TCATGA 2 cut(s) 147, 576
BspLI GGNNCC 4 cut(s) 615, 647, 906, 1080
BspPI GGATC 5 cut(s) 153, 442, 599, 1073, 1086
BspTI CTTAAG 1 cut(s) 371
BspTNI GGTCTC 1 cut(s) 568
BsrDI GCAATG 1 cut(s) 835
BsrFI RCCGGY 1 cut(s) 275
BsrGI TGTACA 1 cut(s) 133
BsrI ACTGG 3 cut(s) 1095, 1174, 1187
BssAI RCCGGY 1 cut(s) 275
BssECI CCNNGG 4 cut(s) 410, 670, 1281, 1293
BssMI GATC 7 cut(s) 120, 158, 367, 434, 604, 1006, 1078
BssNI GRCGYC 1 cut(s) 1032
BssT1I CCWWGG 1 cut(s) 1281
Bst2UI CCWGG 3 cut(s) 672, 1203, 1294
Bst4CI ACNGT 3 cut(s) 655, 773, 913
BstACI GRCGYC 1 cut(s) 1032
BstAFI CTTAAG 1 cut(s) 371
BstAUI TGTACA 1 cut(s) 133
BstC8I GCNNGC 2 cut(s) 711, 1161
BstDEI CTNAG 8 cut(s) 391, 504, 609, 626, 714, 979, 1197, 1326
BstDSI CCRYGG 2 cut(s) 410, 1281
BstEII GGTNACC 1 cut(s) 1232
BstF5I GGATG 7 cut(s) 169, 841, 845, 994, 1054, 1414, 1438
BstFNI CGCG 2 cut(s) 412, 1227
BstHHI GCGC 1 cut(s) 1292
BstKTI GATC 7 cut(s) 123, 161, 370, 437, 607, 1009, 1081
BstMAI GTCTC 2 cut(s) 568, 696
BstMBI GATC 7 cut(s) 120, 158, 367, 434, 604, 1006, 1078
BstMWI GCNNNNNNNGC 4 cut(s) 497, 1224, 1251, 1319
BstNI CCWGG 3 cut(s) 672, 1203, 1294
BstPI GGTNACC 1 cut(s) 1232
BstSCI CCNGG 4 cut(s) 670, 1081, 1201, 1292
BstUI CGCG 2 cut(s) 412, 1227
BstV1I GCAGC 4 cut(s) 226, 948, 1263, 1281
BstX2I RGATCY 4 cut(s) 158, 367, 604, 1078
BstXI CCANNNNNNTGG 1 cut(s) 229
BstYI RGATCY 4 cut(s) 158, 367, 604, 1078
Bsu36I CCTNAGG 3 cut(s) 504, 609, 979
BsuI GTATCC 1 cut(s) 1141
BsuRI GGCC 3 cut(s) 905, 1313, 1367
BtgI CCRYGG 2 cut(s) 410, 1281
BtgZI GCGATG 1 cut(s) 1233
BtsCI GGATG 7 cut(s) 169, 841, 845, 994, 1054, 1414, 1438
BtsIMutI CAGTG 1 cut(s) 769
Cac8I GCNNGC 2 cut(s) 711, 1161
CciI TCATGA 2 cut(s) 147, 576
CfoI GCGC 1 cut(s) 1292
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 9 cut(s) 196, 508, 613, 645, 904, 975, 1107, 1311, 1365
Cfr42I CCGCGG 1 cut(s) 413
CseI GACGC 3 cut(s) 1021, 1152, 1233
Csp6I GTAC 4 cut(s) 75, 134, 680, 1213
CviAII CATG 7 cut(s) 148, 577, 940, 1021, 1282, 1345, 1372
CviQI GTAC 4 cut(s) 75, 134, 680, 1213
DdeI CTNAG 8 cut(s) 391, 504, 609, 626, 714, 979, 1197, 1326
DpnI GATC 7 cut(s) 122, 160, 369, 436, 606, 1008, 1080
DpnII GATC 7 cut(s) 120, 158, 367, 434, 604, 1006, 1078
DraI TTTAAA 1 cut(s) 900
EciI GGCGGA 1 cut(s) 1080
Eco130I CCWWGG 1 cut(s) 1281
Eco31I GGTCTC 1 cut(s) 568
Eco32I GATATC 1 cut(s) 324
Eco47I GGWCC 6 cut(s) 196, 508, 613, 645, 975, 1107
Eco81I CCTNAGG 3 cut(s) 504, 609, 979
Eco91I GGTNACC 1 cut(s) 1232
EcoO109I RGGNCCY 4 cut(s) 196, 508, 613, 904
EcoO65I GGTNACC 1 cut(s) 1232
EcoRII CCWGG 3 cut(s) 670, 1201, 1292
EcoRV GATATC 1 cut(s) 324
EcoT14I CCWWGG 1 cut(s) 1281
ErhI CCWWGG 1 cut(s) 1281
FaeI CATG 7 cut(s) 151, 580, 943, 1024, 1285, 1348, 1375
FalI AAGNNNNNCTT 2 cut(s) 880, 912
FatI CATG 7 cut(s) 147, 576, 939, 1020, 1281, 1344, 1371
FauI CCCGC 2 cut(s) 405, 472
FblI GTMKAC 1 cut(s) 1166
Fnu4HI GCNGC 6 cut(s) 240, 937, 1018, 1192, 1252, 1270
FokI GGATG 7 cut(s) 156, 828, 832, 1001, 1061, 1401, 1445
Fsp4HI GCNGC 6 cut(s) 240, 937, 1018, 1192, 1252, 1270
FspBI CTAG 1 cut(s) 218
GlaI GCGC 1 cut(s) 1291
GluI GCNGC 6 cut(s) 240, 937, 1018, 1192, 1252, 1270
GsaI CCCAGC 2 cut(s) 1147, 1312
GsuI CTGGAG 2 cut(s) 264, 1204
HaeIII GGCC 3 cut(s) 905, 1313, 1367
HapII CCGG 4 cut(s) 78, 276, 488, 1082
HgaI GACGC 3 cut(s) 1021, 1152, 1233
HhaI GCGC 1 cut(s) 1292
Hin1I GRCGYC 1 cut(s) 1032
Hin1II CATG 7 cut(s) 151, 580, 943, 1024, 1285, 1348, 1375
Hin6I GCGC 1 cut(s) 1290
HinP1I GCGC 1 cut(s) 1290
HincII GTYRAC 1 cut(s) 1167
HindII GTYRAC 1 cut(s) 1167
HindIII AAGCTT 1 cut(s) 374
HpaII CCGG 4 cut(s) 78, 276, 488, 1082
HphI GGTGA 3 cut(s) 427, 1190, 1244
Hpy166II GTNNAC 2 cut(s) 838, 1167
Hpy188I TCNGA 3 cut(s) 517, 757, 1078
Hpy188III TCNNGA 5 cut(s) 106, 148, 327, 577, 1036
Hpy8I GTNNAC 2 cut(s) 838, 1167
Hpy99I CGWCG 4 cut(s) 1031, 1127, 1168, 1259
HpyAV CCTTC 2 cut(s) 803, 990
HpyCH4III ACNGT 3 cut(s) 655, 773, 913
HpyCH4IV ACGT 1 cut(s) 1151
HpyCH4V TGCA 5 cut(s) 270, 386, 500, 542, 1052
HpyF10VI GCNNNNNNNGC 4 cut(s) 497, 1224, 1251, 1319
HpyF3I CTNAG 8 cut(s) 391, 504, 609, 626, 714, 979, 1197, 1326
HpySE526I ACGT 1 cut(s) 1151
Hsp92I GRCGYC 1 cut(s) 1032
Hsp92II CATG 7 cut(s) 151, 580, 943, 1024, 1285, 1348, 1375
HspAI GCGC 1 cut(s) 1290
KspI CCGCGG 1 cut(s) 413
Kzo9I GATC 7 cut(s) 120, 158, 367, 434, 604, 1006, 1078
LmnI GCTCC 1 cut(s) 587
Lsp1109I GCAGC 4 cut(s) 226, 948, 1263, 1281
LweI GCATC 6 cut(s) 178, 931, 943, 979, 1039, 1123
MaeI CTAG 1 cut(s) 218
MaeII ACGT 1 cut(s) 1151
MaeIII GTNAC 4 cut(s) 335, 444, 1178, 1232
MalI GATC 7 cut(s) 122, 160, 369, 436, 606, 1008, 1080
MboI GATC 7 cut(s) 120, 158, 367, 434, 604, 1006, 1078
MboII GAAGA 3 cut(s) 301, 614, 872
MfeI CAATTG 1 cut(s) 317
MflI RGATCY 4 cut(s) 158, 367, 604, 1078
MhlI GDGCHC 1 cut(s) 87
MluCI AATT 7 cut(s) 185, 317, 636, 744, 750, 759, 1443
MmeI TCCRAC 3 cut(s) 565, 943, 1056
MseI TTAA 5 cut(s) 96, 372, 762, 782, 899
MslI CAYNNNNRTG 2 cut(s) 174, 227
MspA1I CMGCKG 1 cut(s) 412
MspCI CTTAAG 1 cut(s) 371
MspI CCGG 4 cut(s) 78, 276, 488, 1082
MspR9I CCNGG 4 cut(s) 672, 1083, 1203, 1294
MunI CAATTG 1 cut(s) 317
MvaI CCWGG 3 cut(s) 672, 1203, 1294
MvnI CGCG 2 cut(s) 412, 1227
MwoI GCNNNNNNNGC 4 cut(s) 497, 1224, 1251, 1319
NciI CCSGG 1 cut(s) 1083
NcoI CCATGG 1 cut(s) 1281
NdeII GATC 7 cut(s) 120, 158, 367, 434, 604, 1006, 1078
NlaIII CATG 7 cut(s) 151, 580, 943, 1024, 1285, 1348, 1375
NlaIV GGNNCC 4 cut(s) 615, 647, 906, 1080
NmeAIII GCCGAG 1 cut(s) 442
NmuCI GTSAC 3 cut(s) 444, 1178, 1232
PagI TCATGA 2 cut(s) 147, 576
PflFI GACNNNGTC 1 cut(s) 1092
PkrI GCNGC 6 cut(s) 241, 938, 1019, 1193, 1253, 1271
PpuMI RGGWCCY 3 cut(s) 196, 508, 613
Psp5II RGGWCCY 3 cut(s) 196, 508, 613
Psp6I CCWGG 3 cut(s) 670, 1201, 1292
PspEI GGTNACC 1 cut(s) 1232
PspFI CCCAGC 2 cut(s) 1143, 1308
PspGI CCWGG 3 cut(s) 670, 1201, 1292
PspN4I GGNNCC 4 cut(s) 615, 647, 906, 1080
PspPI GGNCC 9 cut(s) 196, 508, 613, 645, 904, 975, 1107, 1311, 1365
PspPPI RGGWCCY 3 cut(s) 196, 508, 613
PsuI RGATCY 4 cut(s) 158, 367, 604, 1078
PsyI GACNNNGTC 1 cut(s) 1092
RsaI GTAC 4 cut(s) 76, 135, 681, 1214
RsaNI GTAC 4 cut(s) 75, 134, 680, 1213
RseI CAYNNNNRTG 2 cut(s) 174, 227
SacII CCGCGG 1 cut(s) 413
SalI GTCGAC 1 cut(s) 1165
SaqAI TTAA 5 cut(s) 96, 372, 762, 782, 899
SatI GCNGC 6 cut(s) 240, 937, 1018, 1192, 1252, 1270
Sau3AI GATC 7 cut(s) 120, 158, 367, 434, 604, 1006, 1078
Sau96I GGNCC 9 cut(s) 196, 508, 613, 645, 904, 975, 1107, 1311, 1365
ScrFI CCNGG 4 cut(s) 672, 1083, 1203, 1294
SduI GDGCHC 1 cut(s) 87
SfaNI GCATC 6 cut(s) 178, 931, 943, 979, 1039, 1123
Sfr303I CCGCGG 1 cut(s) 413
SgrBI CCGCGG 1 cut(s) 413
SinI GGWCC 6 cut(s) 196, 508, 613, 645, 975, 1107
SmiMI CAYNNNNRTG 2 cut(s) 174, 227
SmlI CTYRAG 1 cut(s) 371
SmoI CTYRAG 1 cut(s) 371
Sse9I AATT 7 cut(s) 185, 317, 636, 744, 750, 759, 1443
SspMI CTAG 1 cut(s) 218
StyD4I CCNGG 4 cut(s) 670, 1081, 1201, 1292
StyI CCWWGG 1 cut(s) 1281
TaaI ACNGT 3 cut(s) 655, 773, 913
TaiI ACGT 1 cut(s) 1154
TaqI TCGA 3 cut(s) 105, 1096, 1166
TasI AATT 7 cut(s) 185, 317, 636, 744, 750, 759, 1443
TatI WGTACW 1 cut(s) 133
TauI GCSGC 2 cut(s) 1020, 1194
Tru1I TTAA 5 cut(s) 96, 372, 762, 782, 899
Tru9I TTAA 5 cut(s) 96, 372, 762, 782, 899
TscAI CASTG 1 cut(s) 776
TseFI GTSAC 3 cut(s) 444, 1178, 1232
TseI GCWGC 4 cut(s) 239, 936, 1251, 1269
Tsp45I GTSAC 3 cut(s) 444, 1178, 1232
TspDTI ATGAA 6 cut(s) 91, 141, 164, 365, 1333, 1452
TspRI CASTG 1 cut(s) 776
Tth111I GACNNNGTC 1 cut(s) 1092
Vha464I CTTAAG 1 cut(s) 371
VpaK11BI GGWCC 6 cut(s) 196, 508, 613, 645, 975, 1107
XcmI CCANNNNNNNNNTGG 1 cut(s) 1244
XmiI GTMKAC 1 cut(s) 1166
XspI CTAG 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.