Rmu_sc0014793.1_g000006
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014793.1
Physical Location & Seq
Forward (+)
26307 .. 31222
4916 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014793.1_g000006.1.cds

Sequence Viewer

Length: 1377 bp
atggctcaggtttctgatttgcgcactactaatggtgcttggaattatgatatgattgttagattgttttcttcagcagaagtggaggccattttaagtgtgcctctaagtttgagaagggttgatgatagattggtaaggaaattagaacgggatgggaaatattctgttaaaacggcgtacatgttctcattctctccttctcctgcttgtgtaccctttgagctatcggttaacattgatttttggaaaaaattgtggaaagtgaagattcctagttcggcaaagattcacatgtggaaagtgtgccataatattcttccatccatggataaactcggttctaaaagggtggtgttggagtcactgaggtatgagattgtgaaagatattgggtctgggaattttggggtggcaaggttggtcagagataagtggaccagagaactctttgctgttaagttcattgagagaggccagaagatagatgaacatgttcaaagggaaatcatgaaccacagatcgttgaagcatcccaatattgttcaattcaaagaggttcttctgacaccaactcatctagccatagtaatggagtatgctgctggaggagaactctttgggagaatatgcaatgctggtagatttagtgagaatgaggcaaggtttttcttccagcaattgatatctggagtcagttactgtcattcaatgcaaatatgtcacagagaccttaagcttgaaaatacactcttagatggcagcacagcacctcatgtcaaaatatgtgattttggatactcaaagtcactactgcagtctcagccaaaatcaactgtcggaacaccagcctatattgctcctgaggtcctatctaaaaagcagtatgatggaaaaattgcagatgtttggtcttgtggagtcaccttatatgtgatgctagttggagcttatccttttgaagatcctgatgatcctaacaacttcagaaaaacaattgatcggatccttggcgtacagtactcaattccagatcatgttcaagtttccattgaatgtaaacatcttttatctcagatatttgtgggaaaacctgaaaagagaataacaatcgcaggaattaaaaaccacccttggttcttaaagaacttacccatggaactgatggaaggaggaagttggcagagcaatgatgtaaatattccatctcaaagcactgaagaagtaatgtccataattcaagaggcaagaaaatcagtacagtccccaaacgcagttacgcatctcgtcgaaggcagcatggatcttgatgatttggatgctgaagttgaagacattgaaacaagtggtgattttgtatgtcacgtgagtagttaa

Protein Analysis

458

Amino Acids

51.86

Weight (kDa)

6.71

Isoelectric Point (pI)

43.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000609)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 23
AclWI GGATC 5 cut(s) 959, 968, 1000, 1013, 1311
AcsI RAATTY 1 cut(s) 403
AcuI CTGAAG 4 cut(s) 57, 970, 1239, 1344
AcvI CACGTG 1 cut(s) 1366
AfaI GTAC 5 cut(s) 182, 216, 1017, 1022, 1260
AflII CTTAAG 1 cut(s) 734
AflIII ACRYGT 3 cut(s) 183, 294, 493
AluBI AGCT 3 cut(s) 226, 739, 950
AluI AGCT 3 cut(s) 226, 739, 950
Alw26I GTCTC 2 cut(s) 723, 825
AlwI GGATC 5 cut(s) 959, 968, 1000, 1013, 1311
AlwNI CAGNNNCTG 1 cut(s) 702
AoxI GGCC 2 cut(s) 87, 475
ApeKI GCWGC 3 cut(s) 602, 762, 1296
ApoI RAATTY 1 cut(s) 403
Asp700I GAANNNNTTC 1 cut(s) 495
AspLEI GCGC 1 cut(s) 24
AspS9I GGNCC 2 cut(s) 438, 868
AsuHPI GGTGA 2 cut(s) 916, 1361
AvaII GGWCC 2 cut(s) 438, 868
AxyI CCTNAGG 1 cut(s) 864
BamHI GGATCC 1 cut(s) 1005
BbrPI CACGTG 1 cut(s) 1366
BbsI GAAGAC 1 cut(s) 1338
BbvI GCAGC 3 cut(s) 589, 774, 1308
BccI CCATC 6 cut(s) 149, 331, 752, 884, 1159, 1213
BceAI ACGGC 1 cut(s) 192
BciVI GTATCC 1 cut(s) 791
BcoDI GTCTC 2 cut(s) 723, 825
BfaI CTAG 3 cut(s) 276, 581, 941
BfmI CTRYAG 1 cut(s) 815
BfrI CTTAAG 1 cut(s) 734
BfuI GTATCC 1 cut(s) 791
BisI GCNGC 3 cut(s) 603, 763, 1297
BlsI GCNGC 3 cut(s) 604, 764, 1298
BmcAI AGTACT 1 cut(s) 1022
Bme18I GGWCC 2 cut(s) 438, 868
BmgT120I GGNCC 2 cut(s) 438, 868
BmiI GGNNCC 1 cut(s) 1007
BmsI GCATC 4 cut(s) 541, 927, 1291, 1309
BpiI GAAGAC 1 cut(s) 1338
BplI GAGNNNNNCTC 2 cut(s) 600, 632
BpmI CTGGAG 2 cut(s) 627, 711
Bpu10I CCTNAGC 1 cut(s) 6
BsaAI YACGTR 1 cut(s) 1366
BsaI GGTCTC 1 cut(s) 723
BsaJI CCNNGG 4 cut(s) 327, 1009, 1133, 1155
Bse21I CCTNAGG 1 cut(s) 864
Bse3DI GCAATG 2 cut(s) 640, 1195
BseDI CCNNGG 4 cut(s) 327, 1009, 1133, 1155
BseGI GGATG 4 cut(s) 160, 323, 532, 1324
BseMI GCAATG 2 cut(s) 640, 1195
BseMII CTCAG 5 cut(s) 20, 359, 836, 855, 1088
BseRI GAGGAG 1 cut(s) 624
BseXI GCAGC 3 cut(s) 589, 774, 1308
BshFI GGCC 2 cut(s) 89, 477
BslFI GGGAC 1 cut(s) 1249
BsmAI GTCTC 2 cut(s) 723, 825
BsmFI GGGAC 1 cut(s) 1249
BsnI GGCC 2 cut(s) 89, 477
Bso31I GGTCTC 1 cut(s) 723
Bsp143I GATC 7 cut(s) 521, 964, 973, 1000, 1005, 1033, 1303
Bsp19I CCATGG 2 cut(s) 327, 1155
BspANI GGCC 2 cut(s) 89, 477
BspCNI CTCAG 5 cut(s) 19, 360, 835, 856, 1087
BspHI TCATGA 1 cut(s) 510
BspLI GGNNCC 1 cut(s) 1007
BspMAI CTGCAG 1 cut(s) 819
BspPI GGATC 5 cut(s) 959, 968, 1000, 1013, 1311
BspTI CTTAAG 1 cut(s) 734
BspTNI GGTCTC 1 cut(s) 723
BsrDI GCAATG 2 cut(s) 640, 1195
BssECI CCNNGG 4 cut(s) 327, 1009, 1133, 1155
BssMI GATC 7 cut(s) 521, 964, 973, 1000, 1005, 1033, 1303
BssT1I CCWWGG 4 cut(s) 327, 1009, 1133, 1155
Bst4CI ACNGT 4 cut(s) 704, 838, 1020, 1263
BstAFI CTTAAG 1 cut(s) 734
BstBAI YACGTR 1 cut(s) 1366
BstDEI CTNAG 7 cut(s) 6, 107, 368, 754, 822, 864, 1074
BstDSI CCRYGG 2 cut(s) 327, 1155
BstF5I GGATG 4 cut(s) 160, 323, 532, 1324
BstHHI GCGC 1 cut(s) 24
BstKTI GATC 7 cut(s) 524, 967, 976, 1003, 1008, 1036, 1306
BstMAI GTCTC 2 cut(s) 723, 825
BstMBI GATC 7 cut(s) 521, 964, 973, 1000, 1005, 1033, 1303
BstMWI GCNNNNNNNGC 2 cut(s) 823, 857
BstNSI RCATGY 3 cut(s) 187, 298, 497
BstSFI CTRYAG 1 cut(s) 815
BstV1I GCAGC 3 cut(s) 589, 774, 1308
BstV2I GAAGAC 1 cut(s) 1338
BstX2I RGATCY 3 cut(s) 964, 1005, 1303
BstXI CCANNNNNNTGG 1 cut(s) 592
BstYI RGATCY 3 cut(s) 964, 1005, 1303
Bsu36I CCTNAGG 1 cut(s) 864
BsuI GTATCC 1 cut(s) 791
BsuRI GGCC 2 cut(s) 89, 477
BtgI CCRYGG 2 cut(s) 327, 1155
BtsCI GGATG 4 cut(s) 160, 323, 532, 1324
BtsIMutI CAGTG 2 cut(s) 365, 1215
CaiI CAGNNNCTG 1 cut(s) 702
CciI TCATGA 1 cut(s) 510
CfoI GCGC 1 cut(s) 24
Cfr13I GGNCC 2 cut(s) 438, 868
Csp6I GTAC 5 cut(s) 181, 215, 1016, 1021, 1259
CviAII CATG 9 cut(s) 184, 295, 328, 494, 511, 776, 1037, 1156, 1300
CviJI RGCY 9 cut(s) 5, 89, 226, 477, 584, 739, 826, 851, 950
CviKI_1 RGCY 9 cut(s) 5, 89, 226, 477, 584, 739, 826, 851, 950
CviQI GTAC 5 cut(s) 181, 215, 1016, 1021, 1259
DdeI CTNAG 7 cut(s) 6, 107, 368, 754, 822, 864, 1074
DpnI GATC 7 cut(s) 523, 966, 975, 1002, 1007, 1035, 1305
DpnII GATC 7 cut(s) 521, 964, 973, 1000, 1005, 1033, 1303
Eco130I CCWWGG 4 cut(s) 327, 1009, 1133, 1155
Eco31I GGTCTC 1 cut(s) 723
Eco32I GATATC 1 cut(s) 687
Eco47I GGWCC 2 cut(s) 438, 868
Eco57I CTGAAG 4 cut(s) 57, 970, 1239, 1344
Eco72I CACGTG 1 cut(s) 1366
Eco81I CCTNAGG 1 cut(s) 864
EcoO109I RGGNCCY 1 cut(s) 868
EcoRV GATATC 1 cut(s) 687
EcoT14I CCWWGG 4 cut(s) 327, 1009, 1133, 1155
ErhI CCWWGG 4 cut(s) 327, 1009, 1133, 1155
FaeI CATG 9 cut(s) 187, 298, 331, 497, 514, 779, 1040, 1159, 1303
FalI AAGNNNNNCTT 2 cut(s) 546, 578
FaqI GGGAC 1 cut(s) 1249
FatI CATG 9 cut(s) 183, 294, 327, 493, 510, 775, 1036, 1155, 1299
Fnu4HI GCNGC 3 cut(s) 603, 763, 1297
FokI GGATG 4 cut(s) 167, 310, 519, 1331
Fsp4HI GCNGC 3 cut(s) 603, 763, 1297
FspBI CTAG 3 cut(s) 276, 581, 941
FspI TGCGCA 1 cut(s) 23
GlaI GCGC 1 cut(s) 23
GluI GCNGC 3 cut(s) 603, 763, 1297
GsuI CTGGAG 2 cut(s) 627, 711
HaeIII GGCC 2 cut(s) 89, 477
HhaI GCGC 1 cut(s) 24
Hin1II CATG 9 cut(s) 187, 298, 331, 497, 514, 779, 1040, 1159, 1303
Hin6I GCGC 1 cut(s) 22
HinP1I GCGC 1 cut(s) 22
HincII GTYRAC 1 cut(s) 235
HindII GTYRAC 1 cut(s) 235
HindIII AAGCTT 1 cut(s) 737
HinfI GANTC 5 cut(s) 271, 289, 362, 693, 921
HpaI GTTAAC 1 cut(s) 235
HphI GGTGA 2 cut(s) 916, 1361
Hpy166II GTNNAC 4 cut(s) 215, 235, 438, 1061
Hpy188I TCNGA 7 cut(s) 16, 428, 567, 842, 989, 1005, 1077
Hpy188III TCNNGA 7 cut(s) 511, 690, 863, 968, 1031, 1241, 1307
Hpy8I GTNNAC 4 cut(s) 215, 235, 438, 1061
Hpy99I CGWCG 1 cut(s) 1292
HpyAV CCTTC 4 cut(s) 111, 210, 1163, 1286
HpyCH4III ACNGT 4 cut(s) 704, 838, 1020, 1263
HpyCH4IV ACGT 1 cut(s) 1365
HpyCH4V TGCA 4 cut(s) 633, 715, 817, 902
HpyF10VI GCNNNNNNNGC 2 cut(s) 823, 857
HpyF3I CTNAG 7 cut(s) 6, 107, 368, 754, 822, 864, 1074
HpySE526I ACGT 1 cut(s) 1365
Hsp92II CATG 9 cut(s) 187, 298, 331, 497, 514, 779, 1040, 1159, 1303
HspAI GCGC 1 cut(s) 22
KspAI GTTAAC 1 cut(s) 235
Kzo9I GATC 7 cut(s) 521, 964, 973, 1000, 1005, 1033, 1303
LmnI GCTCC 2 cut(s) 865, 947
Lsp1109I GCAGC 3 cut(s) 589, 774, 1308
LweI GCATC 4 cut(s) 541, 927, 1291, 1309
MaeI CTAG 3 cut(s) 276, 581, 941
MaeII ACGT 1 cut(s) 1365
MaeIII GTNAC 7 cut(s) 363, 698, 722, 807, 922, 1276, 1361
MalI GATC 7 cut(s) 523, 966, 975, 1002, 1007, 1035, 1305
MboI GATC 7 cut(s) 521, 964, 973, 1000, 1005, 1033, 1303
MboII GAAGA 9 cut(s) 63, 280, 311, 493, 554, 664, 974, 1232, 1343
MfeI CAATTG 2 cut(s) 680, 996
MflI RGATCY 3 cut(s) 964, 1005, 1303
MlyI GAGTC 3 cut(s) 371, 702, 930
MmeI TCCRAC 3 cut(s) 339, 820, 925
MroXI GAANNNNTTC 1 cut(s) 495
MseI TTAA 8 cut(s) 95, 171, 234, 459, 735, 1122, 1142, 1375
MslI CAYNNNNRTG 1 cut(s) 590
MspCI CTTAAG 1 cut(s) 734
MunI CAATTG 2 cut(s) 680, 996
MwoI GCNNNNNNNGC 2 cut(s) 823, 857
NcoI CCATGG 2 cut(s) 327, 1155
NdeII GATC 7 cut(s) 521, 964, 973, 1000, 1005, 1033, 1303
NlaIII CATG 9 cut(s) 187, 298, 331, 497, 514, 779, 1040, 1159, 1303
NlaIV GGNNCC 1 cut(s) 1007
NmuCI GTSAC 5 cut(s) 363, 722, 807, 922, 1361
NsbI TGCGCA 1 cut(s) 23
NspI RCATGY 3 cut(s) 187, 298, 497
PagI TCATGA 1 cut(s) 510
PciI ACATGT 3 cut(s) 183, 294, 493
PdmI GAANNNNTTC 1 cut(s) 495
PfeI GAWTC 2 cut(s) 271, 289
PkrI GCNGC 3 cut(s) 604, 764, 1298
PleI GAGTC 3 cut(s) 370, 701, 929
PmaCI CACGTG 1 cut(s) 1366
PmlI CACGTG 1 cut(s) 1366
PpsI GAGTC 3 cut(s) 370, 701, 929
Ppu21I YACGTR 1 cut(s) 1366
PpuMI RGGWCCY 1 cut(s) 868
PscI ACATGT 3 cut(s) 183, 294, 493
Psp5II RGGWCCY 1 cut(s) 868
PspCI CACGTG 1 cut(s) 1366
PspN4I GGNNCC 1 cut(s) 1007
PspPI GGNCC 2 cut(s) 438, 868
PspPPI RGGWCCY 1 cut(s) 868
PstI CTGCAG 1 cut(s) 819
PstNI CAGNNNCTG 1 cut(s) 702
PsuI RGATCY 3 cut(s) 964, 1005, 1303
RsaI GTAC 5 cut(s) 182, 216, 1017, 1022, 1260
RsaNI GTAC 5 cut(s) 181, 215, 1016, 1021, 1259
RseI CAYNNNNRTG 1 cut(s) 590
SaqAI TTAA 8 cut(s) 95, 171, 234, 459, 735, 1122, 1142, 1375
SatI GCNGC 3 cut(s) 603, 763, 1297
Sau3AI GATC 7 cut(s) 521, 964, 973, 1000, 1005, 1033, 1303
Sau96I GGNCC 2 cut(s) 438, 868
ScaI AGTACT 1 cut(s) 1022
SchI GAGTC 3 cut(s) 371, 702, 930
SfaNI GCATC 4 cut(s) 541, 927, 1291, 1309
SfcI CTRYAG 1 cut(s) 815
SinI GGWCC 2 cut(s) 438, 868
SmiMI CAYNNNNRTG 1 cut(s) 590
SmlI CTYRAG 1 cut(s) 734
SmoI CTYRAG 1 cut(s) 734
SspI AATATT 4 cut(s) 164, 316, 541, 1201
SspMI CTAG 3 cut(s) 276, 581, 941
StyI CCWWGG 4 cut(s) 327, 1009, 1133, 1155
TaaI ACNGT 4 cut(s) 704, 838, 1020, 1263
TaiI ACGT 1 cut(s) 1368
TaqI TCGA 1 cut(s) 1290
TatI WGTACW 2 cut(s) 1020, 1258
TfiI GAWTC 2 cut(s) 271, 289
Tru1I TTAA 8 cut(s) 95, 171, 234, 459, 735, 1122, 1142, 1375
Tru9I TTAA 8 cut(s) 95, 171, 234, 459, 735, 1122, 1142, 1375
TscAI CASTG 2 cut(s) 372, 1222
TseFI GTSAC 5 cut(s) 363, 722, 807, 922, 1361
TseI GCWGC 3 cut(s) 602, 762, 1296
Tsp45I GTSAC 5 cut(s) 363, 722, 807, 922, 1361
TspDTI ATGAA 3 cut(s) 454, 504, 527
TspRI CASTG 2 cut(s) 372, 1222
Vha464I CTTAAG 1 cut(s) 734
VpaK11BI GGWCC 2 cut(s) 438, 868
XapI RAATTY 1 cut(s) 403
XceI RCATGY 3 cut(s) 187, 298, 497
XcmI CCANNNNNNNNNTGG 1 cut(s) 1162
XmnI GAANNNNTTC 1 cut(s) 495
XspI CTAG 3 cut(s) 276, 581, 941
ZrmI AGTACT 1 cut(s) 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.