Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000609

Physical Location & Seq

Genomic Coordinates Reverse (-)

5468214 .. 5476442

Gene Structure 8229 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00222450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGGAAATCGTAGATCAACTCCTATCCACCCAAAATTCTCAACTACTGAAGAATAGTGAAGAAATCAACCTAATGAAACTGGGCCAACATTGCAAATCAGCACCATTAGGTGATGTTGTCGCCGCTATTCTTAACGAAGACGAACCAAGGCTTGCTTGTCACCGTAGGAATGGTGGGAACCTAAACCTAGTCAAATTACAGTGTGGCCCTGTGTCTCAGATCCAAAACCTGCCCACAGACCTTCTTCCACTTAGATCTATGGAGAAGTATGAGATTGTGAAAGATATTGGGTCTGGGGCTTCTGGGGTAGCAAGGTTGGTAAGAGATAAATGTACCGGAGAGCACTTTGCTGTTAAGTTCATCGAGAGAGGCAACAAGACCGTTTCCTGCGATCTGCACAACCTTGGAGCCACTGCCCTGATCCTTACCACTAACTTGCGCGGCCTTGTTGGCTGCCTCAACAACCCCAACTTGCTCACTTGTGCCATCACCACTGCTACCACCACTATCCAGCATCTCCTTGCCCCTGTTCACTTGCTCACCATTAGCAACAGCTTCCACCTCCTGCTCGCCACCAGCTACAATAACCCCGGCCTGCACCTTCCTAATATGAAGAGGCTAACGTGCCCTAGAGATCTTAAGCTTGAAAATGCACTCTTAGATGACAGCACAGCACCTCGGGTGAAAATATGCGATTTTGGATCCTCAAAGTCACTACTACTACATTCTCGGCAAAAATCTACTGCGGGAACTCCGGCTTATATTGCACCTGAGGTCCTATCTGAAAAACAATATGATGGAGAGATTGCAGATGTTTGGTCATGTGGGGTCTGCCTATATGTCATGATTGTTGGAGCATATCCCTTTGAAGATCCTAAGGACCCTACGAACCTTAGAAAAACAATTCTGCGGACCCTTAGTGTATGCTACTCAATCCCTGGTAATGTACGAGTTTCTGTGGAATGTAGAGACTTGCTTGCTAAGATATTTGTGGCAAACCCAGAAAAGGATTTACCTATGGAAATGTGGGAAGGAGGAAGTTGGGAAAGCAATGATGTAAACCATCCATCCCAAAGCATAGAAGAAGTCCTGTCCATAATACAAGAGGCAAGAAAACCTTTAAAGGCCCCAACTGTCAGTAGGCATCTCGTTGGAAGCAGCATGGTTATTGATGATGCTGATGTTGGAGGTCGTTGGTCCTCAGGTTGGGATGCCCGAAGGAGGTTTGATCTATGGGGCGGCATGGTCGTCGGCGTCCAGAGATATTTGGATGCAGATGATGATGGCGGAGGTTGGTCGGATCCCGGCAGACTGGGTCGAGTGATTTGGTCCTCTACTAGGGACGACGACATTGATGCTGACTGCTGGGATACGTTTTGGCTTACGTCGACTGGCTTTGGTGACTGGAGTGGCGGCTCTAAGCCTGGCGGTAGGTTCGGCGATGGACGCGGTGGTGACCAAGATGACGGTGGCAGCGACGACCAAAGTGGCAGCAACCTCCCCATGGATTGCGCCTGGGGTTATGTGCTCTATGTAATGACTTCTACTGACTGCCCTCTCGGGCAAGTTATTATTGTACTGCTTGCTGAAATGCTTAATGAGATTGACATTTTCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009845 GO:0009987 GO:0010033 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0080167 GO:0090351 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko01521 ko03010 ko04016 ko04066 ko04075 ko04150 ko04151 ko04371 ko04714 ko04910 ko05205 map01521 map03010 map04016 map04066 map04075 map04150 map04151 map04371 map04714 map04910 map05205

Pfam Domains

Protein Families

Pkinase

Protein Analysis

539

Amino Acids

58.97

Weight (kDa)

5.14

Isoelectric Point (pI)

40.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	211 - 336	1.1e-26	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	211 - 294	7.4e-10	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000609)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78290 AT1G78290
fragaria_vesca	FvH4_4g14310 FvH4_5g36721 FvH4_5g36721 FvH4_5g36721 FvH4_5g36721 FvH4_5g36721 FvH4_5g36721 FvH4_5g36721 FvH4_5g36722 FvH4_5g36723 FvH4_5g36724 FvH4_5g36724 FvH4_5g36724 FvH4_5g36724 FvH4_5g36724 FvH4_5g36724 FvH4_5g36724 FvH4_5g36724 FvH4_5g36724 FvH4_5g36724
malus_domestica	MD08G1187200.v1.1 MD15G1373000.v1.1 MD15G1373200.v1.1
prunus_persica	Prupe.1G521600_v2.0.a1 Prupe.1G521800_v2.0.a1 Prupe.1G521800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0273131 RchiOBHm_Chr7g0242711 RchiOBHm_Chr7g0242721 RchiOBHm_Chr7g0242741 RchiOBHm_Chr7g0242771 RchiOBHm_Chr7g0242781 RchiOBHm_Chr7g0242791
rosa_laevigata	RLG00000000879 RLG00000000880 RLG00000000882 RLG00000000884 RLG00000000885
rosa_multiflora	Rmu_co8363719.1_g000001 Rmu_sc0004165.1_g000026 Rmu_sc0004165.1_g000038 Rmu_sc0004165.1_g000043 Rmu_sc0004165.1_g000046 Rmu_sc0014793.1_g000006
rosa_roxburghii	Rroxscaffold_3G00222410 Rroxscaffold_3G00222450 Rroxscaffold_3G00222470 Rroxscaffold_3G00222490 Rroxscaffold_3G00222560
rosa_rugosa	Rorug07G0316400 Rorug07G0316500 Rorug07G0316800 Rorug07G0316900 Rorug07G0317000 Rorug07G0317100 Rorug07G0317200 Rorug07G0317200 Rorug07G0317300 Rorug07G0317400
rosa_samantha	Rh6CG191100 Rh7AG471600 Rh7AG472100 Rh7BG441800 Rh7BG442600 Rh7BG442700 Rh7CG488500 Rh7CG488600 Rh7CG489000 Rh7DG457100 Rh7DG457200 Rh7DG457500 Rh7DG457700
rosa_wichuraiana	Rw7G039140 Rw7G039150 Rw7G039160 Rw7G039180 Rw7G039210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	237
AccI	GTMKAC	1 cut(s)	1388
AccII	CGCG	2 cut(s)	441, 1449
AciI	CCGC	9 cut(s)	123, 441, 746, 910, 1239, 1287, 1413, 1428, 1449
AclWI	GGATC	7 cut(s)	214, 415, 696, 709, 866, 1295, 1308
AcsI	RAATTY	1 cut(s)	34
AcuI	CTGAAG	1 cut(s)	68
AcyI	GRCGYC	1 cut(s)	1254
AfaI	GTAC	3 cut(s)	334, 948, 1578
AfiI	CCNNNNNNNGG	5 cut(s)	1006, 1206, 1221, 1338, 1504
AflII	CTTAAG	1 cut(s)	638
AgsI	TTSAA	2 cut(s)	647, 869
AjnI	CCWGG	3 cut(s)	937, 1423, 1514
AluBI	AGCT	3 cut(s)	555, 579, 643
AluI	AGCT	3 cut(s)	555, 579, 643
Alw21I	GWGCWC	2 cut(s)	345, 1530
Alw26I	GTCTC	2 cut(s)	219, 963
AlwI	GGATC	7 cut(s)	214, 415, 696, 709, 866, 1295, 1308
Ama87I	CYCGRG	2 cut(s)	678, 1559
AoxI	GGCC	5 cut(s)	82, 205, 442, 592, 1125
ApeKI	GCWGC	4 cut(s)	453, 1158, 1473, 1491
ApoI	RAATTY	1 cut(s)	34
AspLEI	GCGC	2 cut(s)	441, 1514
AspS9I	GGNCC	8 cut(s)	82, 206, 775, 880, 912, 1126, 1197, 1329
AsuC2I	CCSGG	2 cut(s)	591, 1305
AsuHPI	GGTGA	7 cut(s)	122, 152, 481, 532, 694, 1412, 1466
AvaI	CYCGRG	2 cut(s)	678, 1559
AvaII	GGWCC	5 cut(s)	775, 880, 912, 1197, 1329
AxyI	CCTNAGG	3 cut(s)	771, 876, 1201
BaeGI	GKGCMC	1 cut(s)	629
BamHI	GGATCC	2 cut(s)	701, 1300
BbsI	GAAGAC	1 cut(s)	144
Bbv12I	GWGCWC	2 cut(s)	345, 1530
BbvI	GCAGC	4 cut(s)	440, 1170, 1485, 1503
BccI	CCATC	6 cut(s)	494, 791, 1071, 1075, 1277, 1436
BcgI	CGANNNNNNTGC	4 cut(s)	1231, 1265, 1337, 1371
BciT130I	CCWGG	3 cut(s)	939, 1425, 1516
BciVI	GTATCC	1 cut(s)	1363
BcnI	CCSGG	2 cut(s)	591, 1305
BcoDI	GTCTC	2 cut(s)	219, 963
BfaI	CTAG	3 cut(s)	188, 630, 1338
BfrI	CTTAAG	1 cut(s)	638
BfuAI	ACCTGC	1 cut(s)	237
BfuI	GTATCC	1 cut(s)	1363
BglI	GCCNNNNNGGC	1 cut(s)	450
BglII	AGATCT	2 cut(s)	254, 634
BisI	GCNGC	8 cut(s)	123, 442, 454, 1159, 1240, 1414, 1474, 1492
BlsI	GCNGC	8 cut(s)	124, 443, 455, 1160, 1241, 1415, 1475, 1493
Bme1390I	CCNGG	5 cut(s)	591, 939, 1305, 1425, 1516
Bme18I	GGWCC	5 cut(s)	775, 880, 912, 1197, 1329
BmeT110I	CYCGRG	2 cut(s)	678, 1559
BmgT120I	GGNCC	8 cut(s)	82, 206, 775, 880, 912, 1126, 1197, 1329
BmiI	GGNNCC	7 cut(s)	179, 409, 703, 882, 914, 1128, 1302
BmrFI	CCNGG	5 cut(s)	591, 939, 1305, 1425, 1516
BmrI	ACTGGG	2 cut(s)	89, 1322
BmsI	GCATC	6 cut(s)	523, 1153, 1165, 1201, 1261, 1345
BmuI	ACTGGG	2 cut(s)	89, 1322
BpiI	GAAGAC	1 cut(s)	144
BpmI	CTGGAG	1 cut(s)	1426
BpuMI	CCSGG	2 cut(s)	591, 1305
BsaHI	GRCGYC	1 cut(s)	1254
BsaJI	CCNNGG	7 cut(s)	146, 403, 589, 677, 937, 1503, 1515
BsaWI	WCCGGW	1 cut(s)	335
Bsc4I	CCNNNNNNNGG	5 cut(s)	1006, 1206, 1221, 1338, 1504
Bse1I	ACTGG	4 cut(s)	84, 1317, 1396, 1409
Bse21I	CCTNAGG	3 cut(s)	771, 876, 1201
Bse3DI	GCAATG	2 cut(s)	88, 1057
BseBI	CCWGG	3 cut(s)	939, 1425, 1516
BseDI	CCNNGG	7 cut(s)	146, 403, 589, 677, 937, 1503, 1515
BseGI	GGATG	4 cut(s)	1063, 1067, 1216, 1276
BseLI	CCNNNNNNNGG	5 cut(s)	1006, 1206, 1221, 1338, 1504
BseMI	GCAATG	2 cut(s)	88, 1057
BseMII	CTCAG	3 cut(s)	230, 762, 1215
BseNI	ACTGG	4 cut(s)	84, 1317, 1396, 1409
BseSI	GKGCMC	1 cut(s)	629
BseXI	GCAGC	4 cut(s)	440, 1170, 1485, 1503
BseYI	CCCAGC	1 cut(s)	1365
BsgI	GTGCAG	2 cut(s)	380, 581
Bsh1236I	CGCG	2 cut(s)	441, 1449
BshFI	GGCC	5 cut(s)	84, 207, 444, 594, 1127
BsiHKAI	GWGCWC	2 cut(s)	345, 1530
BsiHKCI	CYCGRG	2 cut(s)	678, 1559
BsiSI	CCGG	4 cut(s)	336, 591, 755, 1305
BslFI	GGGAC	1 cut(s)	1355
BslI	CCNNNNNNNGG	5 cut(s)	1006, 1206, 1221, 1338, 1504
BsmAI	GTCTC	2 cut(s)	219, 963
BsmFI	GGGAC	1 cut(s)	1355
BsnI	GGCC	5 cut(s)	84, 207, 444, 594, 1127
BsoBI	CYCGRG	2 cut(s)	678, 1559
Bsp1286I	GDGCHC	3 cut(s)	345, 629, 1530
Bsp19I	CCATGG	1 cut(s)	1503
BspACI	CCGC	9 cut(s)	123, 441, 746, 910, 1239, 1287, 1413, 1428, 1449
BspANI	GGCC	5 cut(s)	84, 207, 444, 594, 1127
BspCNI	CTCAG	3 cut(s)	229, 763, 1214
BspFNI	CGCG	2 cut(s)	441, 1449
BspHI	TCATGA	1 cut(s)	843
BspLI	GGNNCC	7 cut(s)	179, 409, 703, 882, 914, 1128, 1302
BspMI	ACCTGC	1 cut(s)	237
BspPI	GGATC	7 cut(s)	214, 415, 696, 709, 866, 1295, 1308
BspTI	CTTAAG	1 cut(s)	638
BsrDI	GCAATG	2 cut(s)	88, 1057
BsrI	ACTGG	4 cut(s)	84, 1317, 1396, 1409
BssECI	CCNNGG	7 cut(s)	146, 403, 589, 677, 937, 1503, 1515
BssNI	GRCGYC	1 cut(s)	1254
BssT1I	CCWWGG	3 cut(s)	146, 403, 1503
Bst2UI	CCWGG	3 cut(s)	939, 1425, 1516
Bst4CI	ACNGT	5 cut(s)	164, 201, 382, 1135, 1469
Bst6I	CTCTTC	1 cut(s)	608
BstACI	GRCGYC	1 cut(s)	1254
BstAFI	CTTAAG	1 cut(s)	638
BstC8I	GCNNGC	5 cut(s)	153, 570, 596, 978, 1584
BstDSI	CCRYGG	1 cut(s)	1503
BstEII	GGTNACC	1 cut(s)	1454
BstENI	CCTNNNNNAGG	1 cut(s)	1336
BstF5I	GGATG	4 cut(s)	1063, 1067, 1216, 1276
BstFNI	CGCG	2 cut(s)	441, 1449
BstHHI	GCGC	2 cut(s)	441, 1514
BstMAI	GTCTC	2 cut(s)	219, 963
BstMWI	GCNNNNNNNGC	4 cut(s)	90, 450, 764, 1446
BstNI	CCWGG	3 cut(s)	939, 1425, 1516
BstPI	GGTNACC	1 cut(s)	1454
BstSCI	CCNGG	5 cut(s)	589, 937, 1303, 1423, 1514
BstSLI	GKGCMC	1 cut(s)	629
BstUI	CGCG	2 cut(s)	441, 1449
BstV1I	GCAGC	4 cut(s)	440, 1170, 1485, 1503
BstV2I	GAAGAC	1 cut(s)	144
BstX2I	RGATCY	6 cut(s)	219, 254, 634, 701, 871, 1300
BstYI	RGATCY	6 cut(s)	219, 254, 634, 701, 871, 1300
Bsu36I	CCTNAGG	3 cut(s)	771, 876, 1201
BsuI	GTATCC	1 cut(s)	1363
BsuRI	GGCC	5 cut(s)	84, 207, 444, 594, 1127
BtgI	CCRYGG	1 cut(s)	1503
BtgZI	GCGATG	1 cut(s)	1455
BtsCI	GGATG	4 cut(s)	1063, 1067, 1216, 1276
BtsI	GCAGTG	2 cut(s)	411, 492
BtsIMutI	CAGTG	3 cut(s)	206, 411, 492
BveI	ACCTGC	1 cut(s)	237
Cac8I	GCNNGC	5 cut(s)	153, 570, 596, 978, 1584
CciI	TCATGA	1 cut(s)	843
CfoI	GCGC	2 cut(s)	441, 1514
Cfr13I	GGNCC	8 cut(s)	82, 206, 775, 880, 912, 1126, 1197, 1329
CseI	GACGC	2 cut(s)	1243, 1455
Csp6I	GTAC	3 cut(s)	333, 947, 1577
CviAII	CATG	5 cut(s)	822, 844, 1162, 1243, 1504
CviQI	GTAC	3 cut(s)	333, 947, 1577
DraI	TTTAAA	1 cut(s)	1122
Eam1104I	CTCTTC	1 cut(s)	608
EarI	CTCTTC	1 cut(s)	608
EciI	GGCGGA	1 cut(s)	1302
Eco130I	CCWWGG	3 cut(s)	146, 403, 1503
Eco47I	GGWCC	5 cut(s)	775, 880, 912, 1197, 1329
Eco57I	CTGAAG	1 cut(s)	68
Eco81I	CCTNAGG	3 cut(s)	771, 876, 1201
Eco88I	CYCGRG	2 cut(s)	678, 1559
Eco91I	GGTNACC	1 cut(s)	1454
EcoNI	CCTNNNNNAGG	1 cut(s)	1336
EcoO109I	RGGNCCY	3 cut(s)	775, 880, 1126
EcoO65I	GGTNACC	1 cut(s)	1454
EcoRII	CCWGG	3 cut(s)	937, 1423, 1514
EcoT14I	CCWWGG	3 cut(s)	146, 403, 1503
ErhI	CCWWGG	3 cut(s)	146, 403, 1503
FaeI	CATG	5 cut(s)	825, 847, 1165, 1246, 1507
FalI	AAGNNNNNCTT	4 cut(s)	139, 171, 1102, 1134
FaqI	GGGAC	1 cut(s)	1355
FatI	CATG	5 cut(s)	821, 843, 1161, 1242, 1503
FauI	CCCGC	1 cut(s)	739
FblI	GTMKAC	1 cut(s)	1388
Fnu4HI	GCNGC	8 cut(s)	123, 442, 454, 1159, 1240, 1414, 1474, 1492
FokI	GGATG	4 cut(s)	1050, 1054, 1223, 1283
Fsp4HI	GCNGC	8 cut(s)	123, 442, 454, 1159, 1240, 1414, 1474, 1492
FspBI	CTAG	3 cut(s)	188, 630, 1338
GlaI	GCGC	2 cut(s)	440, 1513
GluI	GCNGC	8 cut(s)	123, 442, 454, 1159, 1240, 1414, 1474, 1492
GsaI	CCCAGC	1 cut(s)	1369
GsuI	CTGGAG	1 cut(s)	1426
HaeIII	GGCC	5 cut(s)	84, 207, 444, 594, 1127
HapII	CCGG	4 cut(s)	336, 591, 755, 1305
HgaI	GACGC	2 cut(s)	1243, 1455
HhaI	GCGC	2 cut(s)	441, 1514
Hin1I	GRCGYC	1 cut(s)	1254
Hin1II	CATG	5 cut(s)	825, 847, 1165, 1246, 1507
Hin6I	GCGC	2 cut(s)	439, 1512
HinP1I	GCGC	2 cut(s)	439, 1512
HincII	GTYRAC	1 cut(s)	1389
HindII	GTYRAC	1 cut(s)	1389
HindIII	AAGCTT	1 cut(s)	641
HpaII	CCGG	4 cut(s)	336, 591, 755, 1305
HphI	GGTGA	7 cut(s)	122, 152, 481, 532, 694, 1412, 1466
Hpy166II	GTNNAC	3 cut(s)	532, 1060, 1389
Hpy188I	TCNGA	4 cut(s)	219, 784, 1300, 1616
Hpy188III	TCNNGA	3 cut(s)	364, 844, 1258
Hpy8I	GTNNAC	3 cut(s)	532, 1060, 1389
Hpy99I	CGWCG	4 cut(s)	1253, 1349, 1390, 1481
HpyAV	CCTTC	4 cut(s)	251, 611, 1025, 1212
HpyCH4III	ACNGT	5 cut(s)	164, 201, 382, 1135, 1469
HpyCH4IV	ACGT	3 cut(s)	623, 1373, 1385
HpyCH4V	TGCA	7 cut(s)	93, 397, 598, 653, 767, 809, 1274
HpyF10VI	GCNNNNNNNGC	4 cut(s)	90, 450, 764, 1446
HpySE526I	ACGT	3 cut(s)	623, 1373, 1385
Hsp92I	GRCGYC	1 cut(s)	1254
Hsp92II	CATG	5 cut(s)	825, 847, 1165, 1246, 1507
HspAI	GCGC	2 cut(s)	439, 1512
LmnI	GCTCC	2 cut(s)	407, 854
Lsp1109I	GCAGC	4 cut(s)	440, 1170, 1485, 1503
LweI	GCATC	6 cut(s)	523, 1153, 1165, 1201, 1261, 1345
MaeI	CTAG	3 cut(s)	188, 630, 1338
MaeII	ACGT	3 cut(s)	623, 1373, 1385
MaeIII	GTNAC	4 cut(s)	158, 711, 1400, 1454
MboII	GAAGA	7 cut(s)	61, 71, 149, 236, 625, 881, 1094
MflI	RGATCY	6 cut(s)	219, 254, 634, 701, 871, 1300
MhlI	GDGCHC	3 cut(s)	345, 629, 1530
MluCI	AATT	3 cut(s)	34, 194, 903
MmeI	TCCRAC	4 cut(s)	832, 1132, 1165, 1278
MseI	TTAA	5 cut(s)	132, 354, 639, 1121, 1596
MspCI	CTTAAG	1 cut(s)	638
MspI	CCGG	4 cut(s)	336, 591, 755, 1305
MspR9I	CCNGG	5 cut(s)	591, 939, 1305, 1425, 1516
MvaI	CCWGG	3 cut(s)	939, 1425, 1516
MvnI	CGCG	2 cut(s)	441, 1449
MwoI	GCNNNNNNNGC	4 cut(s)	90, 450, 764, 1446
NciI	CCSGG	2 cut(s)	591, 1305
NcoI	CCATGG	1 cut(s)	1503
NlaIII	CATG	5 cut(s)	825, 847, 1165, 1246, 1507
NlaIV	GGNNCC	7 cut(s)	179, 409, 703, 882, 914, 1128, 1302
NmeAIII	GCCGAG	1 cut(s)	709
NmuCI	GTSAC	4 cut(s)	158, 711, 1400, 1454
PagI	TCATGA	1 cut(s)	843
PcsI	WCGNNNNNNNCGW	1 cut(s)	1473
PflFI	GACNNNGTC	1 cut(s)	1314
PkrI	GCNGC	8 cut(s)	124, 443, 455, 1160, 1241, 1415, 1475, 1493
PpuMI	RGGWCCY	2 cut(s)	775, 880
Psp5II	RGGWCCY	2 cut(s)	775, 880
Psp6I	CCWGG	3 cut(s)	937, 1423, 1514
PspEI	GGTNACC	1 cut(s)	1454
PspFI	CCCAGC	1 cut(s)	1365
PspGI	CCWGG	3 cut(s)	937, 1423, 1514
PspN4I	GGNNCC	7 cut(s)	179, 409, 703, 882, 914, 1128, 1302
PspPI	GGNCC	8 cut(s)	82, 206, 775, 880, 912, 1126, 1197, 1329
PspPPI	RGGWCCY	2 cut(s)	775, 880
PsuI	RGATCY	6 cut(s)	219, 254, 634, 701, 871, 1300
PsyI	GACNNNGTC	1 cut(s)	1314
RsaI	GTAC	3 cut(s)	334, 948, 1578
RsaNI	GTAC	3 cut(s)	333, 947, 1577
SalI	GTCGAC	1 cut(s)	1387
SaqAI	TTAA	5 cut(s)	132, 354, 639, 1121, 1596
SatI	GCNGC	8 cut(s)	123, 442, 454, 1159, 1240, 1414, 1474, 1492
Sau96I	GGNCC	8 cut(s)	82, 206, 775, 880, 912, 1126, 1197, 1329
ScrFI	CCNGG	5 cut(s)	591, 939, 1305, 1425, 1516
SduI	GDGCHC	3 cut(s)	345, 629, 1530
SfaNI	GCATC	6 cut(s)	523, 1153, 1165, 1201, 1261, 1345
SinI	GGWCC	5 cut(s)	775, 880, 912, 1197, 1329
SmlI	CTYRAG	1 cut(s)	638
SmoI	CTYRAG	1 cut(s)	638
Sse9I	AATT	3 cut(s)	34, 194, 903
SsiI	CCGC	9 cut(s)	123, 441, 746, 910, 1239, 1287, 1413, 1428, 1449
SspMI	CTAG	3 cut(s)	188, 630, 1338
StyD4I	CCNGG	5 cut(s)	589, 937, 1303, 1423, 1514
StyI	CCWWGG	3 cut(s)	146, 403, 1503
TaaI	ACNGT	5 cut(s)	164, 201, 382, 1135, 1469
TaiI	ACGT	3 cut(s)	626, 1376, 1388
TaqI	TCGA	3 cut(s)	363, 1318, 1388
TasI	AATT	3 cut(s)	34, 194, 903
TatI	WGTACW	1 cut(s)	1576
TauI	GCSGC	4 cut(s)	125, 444, 1242, 1416
Tru1I	TTAA	5 cut(s)	132, 354, 639, 1121, 1596
Tru9I	TTAA	5 cut(s)	132, 354, 639, 1121, 1596
TscAI	CASTG	3 cut(s)	206, 418, 499
TseFI	GTSAC	4 cut(s)	158, 711, 1400, 1454
TseI	GCWGC	4 cut(s)	453, 1158, 1473, 1491
Tsp45I	GTSAC	4 cut(s)	158, 711, 1400, 1454
TspDTI	ATGAA	3 cut(s)	89, 349, 626
TspRI	CASTG	3 cut(s)	206, 418, 499
Tth111I	GACNNNGTC	1 cut(s)	1314
Vha464I	CTTAAG	1 cut(s)	638
VpaK11BI	GGWCC	5 cut(s)	775, 880, 912, 1197, 1329
XagI	CCTNNNNNAGG	1 cut(s)	1336
XapI	RAATTY	1 cut(s)	34
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1466
XmiI	GTMKAC	1 cut(s)	1388
XspI	CTAG	3 cut(s)	188, 630, 1338

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.