Rh7DG457200
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
65031898 .. 65065217
33320 bp
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UTR
Exon/CDS
Intron
Rh7DG457200.1

Sequence Viewer

Length: 600 bp
ATGGAGAAGTATGAGGTTGTGAAAGATATTGGGTCTGGGAATTTTGGTGTAGCGAGGCTGGTCCGAGACAAGAATACCCAAGAACTCTTAGCTGTTAAGTTTATTGAGAGAGGCCTTAAGTCATTACTGAGTTCTCTGCCAAAGTCTACTGTGGGAACACCTGCTTATATTGCACCTGAAGTTCTATCTAAAAAACAATATGACGGACAGAGAATAACAATTCCAGAAATTAAGACCCACCGTTGGTTTGCAAAGAACTTACCTCTGGAAATGAAGGAAGGAGGAACTTGGGAGAATAATGCTGTAAACACACCATCCCAAAGCATTGAAGAAGTTCAGTCCATAATAAAAGAGGCAAGAAAACCTTTGAAGGTCCCAACTGTCAGTAGGCATCTCGTTGGAAGCAGCATGGCTATTGATGATGCTGATGTTGGAGGTTGGGATGCCCGAAGGTGGTTTGATCTATGGGGCGGCATGGTCGTCGACGTCCAGAGATATTTGGATGCAGATGATGATGGCGGAGGTTGGTCAGATCCGGGCAGACTGGGTCAAGTGATTTGGTCCTCTACTAGGGACGACGACATGGATGCTGACTGTTGA

Protein Analysis

199

Amino Acids

22.18

Weight (kDa)

5.17

Isoelectric Point (pI)

40.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000609)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 169
AatII GACGTC 1 cut(s) 489
Acc36I ACCTGC 1 cut(s) 169
AccI GTMKAC 2 cut(s) 146, 483
AciI CCGC 2 cut(s) 471, 519
AclWI GGATC 1 cut(s) 527
AcsI RAATTY 1 cut(s) 40
AcuI CTGAAG 1 cut(s) 198
AcyI GRCGYC 1 cut(s) 486
AfiI CCNNNNNNNGG 3 cut(s) 243, 453, 570
AflII CTTAAG 1 cut(s) 116
AgsI TTSAA 2 cut(s) 329, 370
AluBI AGCT 1 cut(s) 92
AluI AGCT 1 cut(s) 92
Alw26I GTCTC 1 cut(s) 60
AlwI GGATC 1 cut(s) 527
AoxI GGCC 1 cut(s) 112
ApeKI GCWGC 1 cut(s) 405
ApoI RAATTY 1 cut(s) 40
Asp700I GAANNNNTTC 1 cut(s) 333
AspS9I GGNCC 3 cut(s) 61, 373, 561
AsuC2I CCSGG 1 cut(s) 537
AvaII GGWCC 3 cut(s) 61, 373, 561
BbvI GCAGC 1 cut(s) 417
BccI CCATC 2 cut(s) 322, 509
BcgI CGANNNNNNTGC 3 cut(s) 463, 497, 569
BcnI CCSGG 1 cut(s) 537
BcoDI GTCTC 1 cut(s) 60
BfaI CTAG 1 cut(s) 570
BfrI CTTAAG 1 cut(s) 116
BfuAI ACCTGC 1 cut(s) 169
BisI GCNGC 2 cut(s) 406, 472
BlsI GCNGC 2 cut(s) 407, 473
Bme1390I CCNGG 1 cut(s) 537
Bme18I GGWCC 3 cut(s) 61, 373, 561
BmgT120I GGNCC 3 cut(s) 61, 373, 561
BmiI GGNNCC 1 cut(s) 375
BmrFI CCNGG 1 cut(s) 537
BmrI ACTGGG 1 cut(s) 554
BmsI GCATC 5 cut(s) 400, 412, 433, 493, 577
BmuI ACTGGG 1 cut(s) 554
BpuMI CCSGG 1 cut(s) 537
BsaHI GRCGYC 1 cut(s) 486
Bsc4I CCNNNNNNNGG 3 cut(s) 243, 453, 570
Bse1I ACTGG 1 cut(s) 549
BseGI GGATG 4 cut(s) 314, 448, 508, 592
BseLI CCNNNNNNNGG 3 cut(s) 243, 453, 570
BseMII CTCAG 1 cut(s) 119
BseNI ACTGG 1 cut(s) 549
BseXI GCAGC 1 cut(s) 417
BshFI GGCC 1 cut(s) 114
BsiSI CCGG 1 cut(s) 536
BslFI GGGAC 2 cut(s) 359, 587
BslI CCNNNNNNNGG 3 cut(s) 243, 453, 570
BsmAI GTCTC 1 cut(s) 60
BsmFI GGGAC 2 cut(s) 359, 587
BsnI GGCC 1 cut(s) 114
Bsp143I GATC 2 cut(s) 460, 532
BspACI CCGC 2 cut(s) 471, 519
BspANI GGCC 1 cut(s) 114
BspCNI CTCAG 1 cut(s) 120
BspLI GGNNCC 1 cut(s) 375
BspMI ACCTGC 1 cut(s) 169
BspPI GGATC 1 cut(s) 527
BspTI CTTAAG 1 cut(s) 116
BsrI ACTGG 1 cut(s) 549
BssMI GATC 2 cut(s) 460, 532
BssNI GRCGYC 1 cut(s) 486
Bst4CI ACNGT 4 cut(s) 151, 242, 382, 596
BstACI GRCGYC 1 cut(s) 486
BstAFI CTTAAG 1 cut(s) 116
BstDEI CTNAG 2 cut(s) 88, 128
BstENI CCTNNNNNAGG 1 cut(s) 568
BstF5I GGATG 4 cut(s) 314, 448, 508, 592
BstKTI GATC 2 cut(s) 463, 535
BstMAI GTCTC 1 cut(s) 60
BstMBI GATC 2 cut(s) 460, 532
BstMWI GCNNNNNNNGC 1 cut(s) 170
BstSCI CCNGG 1 cut(s) 535
BstV1I GCAGC 1 cut(s) 417
BstX2I RGATCY 1 cut(s) 532
BstYI RGATCY 1 cut(s) 532
BsuRI GGCC 1 cut(s) 114
BtsCI GGATG 4 cut(s) 314, 448, 508, 592
BveI ACCTGC 1 cut(s) 169
Cfr13I GGNCC 3 cut(s) 61, 373, 561
CviAII CATG 3 cut(s) 409, 475, 583
CviJI RGCY 4 cut(s) 58, 92, 114, 413
CviKI_1 RGCY 4 cut(s) 58, 92, 114, 413
DdeI CTNAG 2 cut(s) 88, 128
DpnI GATC 2 cut(s) 462, 534
DpnII GATC 2 cut(s) 460, 532
EciI GGCGGA 1 cut(s) 534
Eco147I AGGCCT 1 cut(s) 114
Eco47I GGWCC 3 cut(s) 61, 373, 561
Eco57I CTGAAG 1 cut(s) 198
EcoNI CCTNNNNNAGG 1 cut(s) 568
EcoO109I RGGNCCY 1 cut(s) 373
FaeI CATG 3 cut(s) 412, 478, 586
FaiI YATR 8 cut(s) 12, 168, 201, 344, 410, 466, 476, 584
FalI AAGNNNNNCTT 2 cut(s) 349, 381
FaqI GGGAC 2 cut(s) 359, 587
FatI CATG 3 cut(s) 408, 474, 582
FblI GTMKAC 2 cut(s) 146, 483
Fnu4HI GCNGC 2 cut(s) 406, 472
FokI GGATG 3 cut(s) 301, 455, 515
Fsp4HI GCNGC 2 cut(s) 406, 472
FspBI CTAG 1 cut(s) 570
GluI GCNGC 2 cut(s) 406, 472
HaeIII GGCC 1 cut(s) 114
HapII CCGG 1 cut(s) 536
Hin1I GRCGYC 1 cut(s) 486
Hin1II CATG 3 cut(s) 412, 478, 586
HincII GTYRAC 1 cut(s) 484
HindII GTYRAC 1 cut(s) 484
HpaII CCGG 1 cut(s) 536
Hpy166II GTNNAC 3 cut(s) 147, 307, 484
Hpy188I TCNGA 2 cut(s) 65, 532
Hpy188III TCNNGA 3 cut(s) 224, 266, 490
Hpy8I GTNNAC 3 cut(s) 147, 307, 484
Hpy99I CGWCG 3 cut(s) 485, 488, 581
HpyAV CCTTC 4 cut(s) 268, 272, 364, 444
HpyCH4III ACNGT 4 cut(s) 151, 242, 382, 596
HpyCH4IV ACGT 1 cut(s) 486
HpyCH4V TGCA 3 cut(s) 173, 251, 506
HpyF10VI GCNNNNNNNGC 1 cut(s) 170
HpyF3I CTNAG 2 cut(s) 88, 128
HpySE526I ACGT 1 cut(s) 486
Hsp92I GRCGYC 1 cut(s) 486
Hsp92II CATG 3 cut(s) 412, 478, 586
Kzo9I GATC 2 cut(s) 460, 532
LpnPI CCDG 9 cut(s) 21, 44, 174, 189, 237, 251, 503, 530, 549
Lsp1109I GCAGC 1 cut(s) 417
LweI GCATC 5 cut(s) 400, 412, 433, 493, 577
MaeI CTAG 1 cut(s) 570
MaeII ACGT 1 cut(s) 486
MalI GATC 2 cut(s) 462, 534
MboI GATC 2 cut(s) 460, 532
MboII GAAGA 1 cut(s) 341
MflI RGATCY 1 cut(s) 532
MluCI AATT 3 cut(s) 40, 219, 228
MmeI TCCRAC 2 cut(s) 379, 412
MnlI CCTC 9 cut(s) 7, 48, 104, 273, 275, 346, 428, 515, 574
MroXI GAANNNNTTC 1 cut(s) 333
MseI TTAA 3 cut(s) 96, 117, 231
MspCI CTTAAG 1 cut(s) 116
MspI CCGG 1 cut(s) 536
MspR9I CCNGG 1 cut(s) 537
MwoI GCNNNNNNNGC 1 cut(s) 170
NciI CCSGG 1 cut(s) 537
NdeII GATC 2 cut(s) 460, 532
NlaIII CATG 3 cut(s) 412, 478, 586
NlaIV GGNNCC 1 cut(s) 375
PaqCI CACCTGC 1 cut(s) 169
PceI AGGCCT 1 cut(s) 114
PdmI GAANNNNTTC 1 cut(s) 333
PflFI GACNNNGTC 1 cut(s) 546
PkrI GCNGC 2 cut(s) 407, 473
PpuMI RGGWCCY 1 cut(s) 373
Psp5II RGGWCCY 1 cut(s) 373
PspN4I GGNNCC 1 cut(s) 375
PspPI GGNCC 3 cut(s) 61, 373, 561
PspPPI RGGWCCY 1 cut(s) 373
PsuI RGATCY 1 cut(s) 532
PsyI GACNNNGTC 1 cut(s) 546
SalI GTCGAC 1 cut(s) 482
SaqAI TTAA 3 cut(s) 96, 117, 231
SatI GCNGC 2 cut(s) 406, 472
Sau3AI GATC 2 cut(s) 460, 532
Sau96I GGNCC 3 cut(s) 61, 373, 561
ScrFI CCNGG 1 cut(s) 537
SfaNI GCATC 5 cut(s) 400, 412, 433, 493, 577
SgrDI CGTCGACG 1 cut(s) 482
SinI GGWCC 3 cut(s) 61, 373, 561
SmlI CTYRAG 1 cut(s) 116
SmoI CTYRAG 1 cut(s) 116
Sse9I AATT 3 cut(s) 40, 219, 228
SseBI AGGCCT 1 cut(s) 114
SsiI CCGC 2 cut(s) 471, 519
SspMI CTAG 1 cut(s) 570
StuI AGGCCT 1 cut(s) 114
StyD4I CCNGG 1 cut(s) 535
TaaI ACNGT 4 cut(s) 151, 242, 382, 596
TaiI ACGT 1 cut(s) 489
TaqI TCGA 1 cut(s) 483
TasI AATT 3 cut(s) 40, 219, 228
TauI GCSGC 1 cut(s) 474
Tru1I TTAA 3 cut(s) 96, 117, 231
Tru9I TTAA 3 cut(s) 96, 117, 231
TseI GCWGC 1 cut(s) 405
TspDTI ATGAA 1 cut(s) 287
TspGWI ACGGA 1 cut(s) 219
Tth111I GACNNNGTC 1 cut(s) 546
Vha464I CTTAAG 1 cut(s) 116
VpaK11BI GGWCC 3 cut(s) 61, 373, 561
XagI CCTNNNNNAGG 1 cut(s) 568
XapI RAATTY 1 cut(s) 40
XmiI GTMKAC 2 cut(s) 146, 483
XmnI GAANNNNTTC 1 cut(s) 333
XspI CTAG 1 cut(s) 570
ZraI GACGTC 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.